TCONS_00051476-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051476-protein
Unique NameTCONS_00051476-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length181

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051476-protein ID=TCONS_00051476-protein|Name=TCONS_00051476-protein|organism=Clytia hemisphaerica|type=polypeptide|length=181bp
MGEKSVFGLLNGLAKRLYYGENNITDEFLQTQLYPDLNQEEFNTILLKFE
QILKNIAYSNMDLRQLDAFLSSQAKKKPDFLSEGDITSITKFWKQNKSKI
HTELLNRNMGRRVTAVKWRIAVTSKGSEQQVDESKVVFNIETQEGVSDTE
FVRFEANETELDSMVNEIENIEKRIVNFVQH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032630XLOC_032630Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051476TCONS_00051476Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003594HATPase_C
IPR033776COMMD1_N
IPR017920COMM
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 154..174
IPR003594Histidine kinase-like ATPase, C-terminal domainGENE3D3.30.565.10coord: 11..143
e-value: 0.0013
score: 17.7
IPR033776COMMD1 N-terminal domainPFAMPF17221COMMD1_Ncoord: 3..102
e-value: 2.1E-34
score: 117.8
IPR017920COMM domainPFAMPF07258COMM_domaincoord: 113..175
e-value: 1.7E-8
score: 34.3
IPR017920COMM domainPROSITEPS51269COMMcoord: 112..179
score: 8.718

Blast
[Close]
BLAST of TCONS_00051476-protein vs. Swiss-Prot (Human)
Match: COMD1 (COMM domain-containing protein 1 OS=Homo sapiens GN=COMMD1 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.723e-31
Identity = 65/187 (34.76%), Postives = 106/187 (56.68%), Query Frame = 0 
Query:    2 GEKSVFGLLNGLAKRLYYGENNITDEFLQTQLYPDLNQEEFNTILLKFEQILKNIAYSNMDLRQLDAFLSSQAKKKPDFLSEGDITS-----ITKFWKQNKSKIHTELLNR---NMGRRVTAVKWRIAVTSKGSEQ-QVDESKVVFNIETQEGVSDTEFVRFEANETELDSMVNEIENIEKRIVNFV 179
            G K + GLLN LA+  ++G   IT+E L++QLYP++  EEF   L K   ILK+IA ++MD  QL+AFL++Q KK      +G ITS     I+KFWK +K+KI   L+N+   N G R   + WR+   S+     Q+     +  +E  +   ++EF+  E +E +++ ++  +  +E+ I   +
Sbjct:    8 GGKPLSGLLNALAQDTFHGYPGITEELLRSQLYPEVPPEEFRPFLAKMRGILKSIASADMDFNQLEAFLTAQTKK------QGGITSDQAAVISKFWKSHKTKIRESLMNQSRWNSGLR--GLSWRVDGKSQSRHSAQIHTPVAIIELELGKYGQESEFLCLEFDEVKVNQILKTLSEVEESISTLI 186
The following BLAST results are available for this feature:
BLAST of TCONS_00051476-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
COMD18.723e-3134.76COMM domain-containing protein 1 OS=Homo sapiens G... [more]
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