TCONS_00052461-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052461-protein
Unique NameTCONS_00052461-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1136

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052461-protein ID=TCONS_00052461-protein|Name=TCONS_00052461-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1136bp
MALGKGRGKVAYADIKKDDHSMAGPRNNGSFTPSTTEQAMDEYLRNINMY
RKPVAKDGSCLFRVVAEQVFFTQFLHKKVRTDCISYMNVHRKIFESFIEG
SFEHHLFNLRNLKEWGGHSEISALSLLYKYDFIVYQIANPTPQDVTKNGF
DKKIHLCYLNNNHYDCVYPISFKSSAAIAQSIVYEILLGNVFAEVDKREM
EADCTAISEAEESQDPSAWTEVKTKQNKGKMVDGKQSDNPWENLISVIPE
SNKNPRVMRSLTASLDPSVYRNIELDVWENTRSEQQKFDQVVAAAHQFKP
GDVCIATIRESKDHSKQVIVRVQKVGEKCIVVPEDKDVQYYVHLDDLQPM
VNGEHDYRSLPGYYNKYENEQEFQSQKRRKYRKGREEERKVNEFQNNQQN
RSRGSAPVEKDTNRGGGRKNNQRKEKSVSPTKNQQRENTVPKKTEKTENE
LAPVVNGSATTEESVTKVAKPAETAAAFWGRMRSNPAQEQPPNDVTTPTT
KTTDELIKKNNLTPTNANSDKLESSEPTDRAPDPIQIVKNKKKTNTAPIA
DASKQDTAQIDIRNNQKSPETTTANSQPVSSPPKDIKKLSLTSQASAKVK
KVRENILMSSAKIESGSITSPSKSELKASPVKEEVPKKVTGEDSIGVTMA
KEIKQEAPSPIIQKRDEIELEKPPTVSPPTIHKHTDSTSGCLETKVEQLD
LNKNTQPNIIVSPESQRSSVEMSENRPTRPPKLGKVKKKVSFGSTTEIIE
TIHNIPSLIPQPDEIQQMSPQQAPIPPQKQTPVIPSGGGAGGERGKIHIP
RDHIEKHMNYQQQQQQQSHNQINMELHHPTQQNYQPTTTGINQQQQHMTP
ESLQQQYIRILQSQQQSPFVSHNTASNNIQTFYHPAATQANFYPVIYRQG
NNVDMRTTHLQLSQDPEAKDLPEDPQVVQYFYNLGVQYCMMMSPQNFHQQ
VNQAGILPLPVANTPIQQVPVHQLVLNNSSENSRNTTNELYVANSPQQQT
ETSLMDMQQHHPVALPSQAQQIVTPASLQTRLQHHQQPQQAATNLATGFQ
HQHQPRHPRPNLSDYETPPRHRRGLISPHSGALSQHNVGLINSNLHHRSN
NQRHISQRHNFNGGRGIIGQGPKPMRIDHIRPSNNF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033173XLOC_033173Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052461TCONS_00052461Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003323OTU_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003323OTU domainPFAMPF02338OTUcoord: 57..159
e-value: 1.9E-9
score: 38.0
IPR003323OTU domainPROSITEPS50802OTUcoord: 49..170
score: 22.111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1033..1068
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 831..852
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 615..634
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 483..597
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1107..1136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 712..739
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 368..468
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 766..791
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..235
NoneNo IPR availableSUPERFAMILY54001Cysteine proteinasescoord: 36..170

Blast
[Close]
BLAST of TCONS_00052461-protein vs. Swiss-Prot (Human)
Match: OTUD4 (OTU domain-containing protein 4 OS=Homo sapiens GN=OTUD4 PE=1 SV=4)

HSP 1 Score: 233.417 bits (594), Expect = 7.617e-63
Identity = 134/328 (40.85%), Postives = 188/328 (57.32%), Query Frame = 0 
Query:   19 DHSMAGPRNNGSFTPSTTEQAMDEYLRNINMYRKPVAKDGSCLFRVVAEQVFFTQFLHKKVRTDCISYMNVHRKIFESFIEGSFEHHLFNLRNLKEWGGHSEISALSLLYKYDFIVYQIANPTPQDVTKNGFDKKIHLCYLNNNHYDCVYPISFKSSAAIAQSIVYEILLGNVF-AEVDKREMEADCTAI-----SEAEESQDPSAWTEVKTKQ---NKGKMVDGKQSDNPWENLISVIPESNKNPRVMRSLTASLDPSVYRNIELDVWENTRSEQQKFDQVVAAAHQFKPGDVCIATIRESKD---------HSKQVIVRVQKVGEK 328
            D   AGPR +   TP      MD YLR + +YRK VAKDGSCLFR VAEQV  +Q  H +VR  CI Y+  +R+ FE+FIEGSFE +L  L N +EW G  EISALSL+Y+ DFI+Y+  N +P  VT+N F +K+ LC+ N NHYD VYPI +K S+A+ QS++YE+L   VF  +V K  ME D   +     SE  +S+D S  ++        N  K + G +      N  S+         + R +  SL+P+VYRN+E ++W  ++  QQK D  +AA  Q++ GD C   +  +           HS+   V V+++G+K
Sbjct:   12 DQGGAGPREDA--TP------MDAYLRKLGLYRKLVAKDGSCLFRAVAEQVLHSQSRHVEVRMACIHYLRENREKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMYRKDFIIYREPNVSPSQVTENNFPEKVLLCFSNGNHYDIVYPIKYKESSAMCQSLLYELLYEKVFKTDVSKIVMELDTLEVADEDNSEISDSEDDSCKSKTAAAAADVNGFKPLSGNEQLKNNGNSTSL--------PLSRKVLKSLNPAVYRNVEYEIWLKSKQAQQKRDYSIAAGLQYEVGDKCQVRLDHNGKFLNADVQGIHSENGPVLVEELGKK 323
The following BLAST results are available for this feature:
BLAST of TCONS_00052461-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OTUD47.617e-6340.85OTU domain-containing protein 4 OS=Homo sapiens GN... [more]
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