TCONS_00053399-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053399-protein
Unique NameTCONS_00053399-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length345

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053399-protein ID=TCONS_00053399-protein|Name=TCONS_00053399-protein|organism=Clytia hemisphaerica|type=polypeptide|length=345bp
MNALMPSWSVFALLLVLVAISGSIYALIEMISLSLDGEEYPAFHQGVWAG
IWWAFVSMTTVGYGDICPKTKPGRIFSIVWVITGVASCALFTSYMTTVLT
SICMTEDVSLTATKVGVLTESEEHRFAMKRNSMPQAFPTINEVIDALKRR
EVRGILIDSYIAAEYEEQLKSFKRQMVIEYITSYGVVFLNEGVRFSDCVR
DYVFSRQNEISEIIRQNVQLLEVSTTSAAAEKSNNLIDVKSPSFFYIVTG
VIGILVVAAFFGTIWDIRKRQMEKLKKYNPHEDISLSEWRARYKCDFQQV
LEDMQGECTSISDKCTSILKQLQSSNGIVCLRKKRSDDMRIEYDY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033709XLOC_033709Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053399TCONS_00053399Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028325VG_K_chnl
IPR013099K_chnl_dom
Vocabulary: Biological Process
TermDefinition
GO:0006813potassium ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0005249voltage-gated potassium channel activity
Vocabulary: Cellular Component
TermDefinition
GO:0008076voltage-gated potassium channel complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006813 potassium ion transport
cellular_component GO:0008076 voltage-gated potassium channel complex
molecular_function GO:0005249 voltage-gated potassium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028325Voltage-gated potassium channelPRINTSPR00169KCHANNELcoord: 73..99
score: 22.68
coord: 44..66
score: 52.26
NoneNo IPR availableGENE3D1.10.287.70coord: 4..324
e-value: 3.2E-20
score: 71.6
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 7..102
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 14..100
e-value: 2.4E-15
score: 56.1

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053399-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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