TCONS_00053517-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053517-protein
Unique NameTCONS_00053517-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length325

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053517-protein ID=TCONS_00053517-protein|Name=TCONS_00053517-protein|organism=Clytia hemisphaerica|type=polypeptide|length=325bp
MKNLKRKNNNARVTLVHSCEMRALHQKAGASITEIHKMFPMYNRRTVQRH
AKRQIGDLTLRKKNAGGRPSKATNQDRRAIVRTVNILRRTEGANFTSGRI
KVIAGVTHLSNRTVRRILNQGGYRYLQGRRKGLLTLADLKKRLKFCKTIR
RRKLGLDFWRRGISFYLDAKGFQYKTNPQDQARAPRACQWRKRNEGLEFG
LTRKCSKAGVVNVNFMVAISYGAGVVLCEPYFGSITAEKMATIVADHFDK
AFLKSSNPITRRFLMDNCPRQKSKKAMTAYEKVKSMAFCIPPRSPDLNPI
ENFFNQVNQVLQKQALDSNQYHKGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033785XLOC_033785Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053517TCONS_00053517Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
IPR002492Transposase_Tc1-like
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
GO:0006313transposition, DNA-mediated
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006313 transposition, DNA-mediated
molecular_function GO:0003677 DNA binding
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 198..323
e-value: 1.6E-4
score: 21.1
NoneNo IPR availableGENE3D1.10.10.60coord: 66..121
e-value: 0.067
score: 12.8
NoneNo IPR availablePFAMPF13358DDE_3coord: 212..315
e-value: 1.3E-9
score: 37.8
IPR002492Transposase, Tc1-likePFAMPF01498HTH_Tnp_Tc3_2coord: 107..148
e-value: 5.5E-7
score: 29.6

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053517-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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