TCONS_00053650-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053650-protein
Unique NameTCONS_00053650-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length805

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053650-protein ID=TCONS_00053650-protein|Name=TCONS_00053650-protein|organism=Clytia hemisphaerica|type=polypeptide|length=805bp
MYIFIKTLIFLFTCTQAINAIDFVQKYTLSNVDKINGKDCEKWTWKTDAP
QSTDKQICFNPKSDKILCNLELPQFKPPKTPDGKITNLILEFDYIPDVTS
CTGRCGIKHSLLVYLKESQPQELSDVITGTKSKTVKRTYHFENPDNINGI
YFRMTPIDYCGRIRNVKLYIDEIACKKNQLELAEFPNFLKDEINQQSSVI
GQCIHNAVPTTLGTQPSAECDAQNGVYNVKSGCVCDAGHQKIGSECIVCP
NGYFKIPPGNTPCLKCGLNSMSLHNFTSCKCLSGYHRDENVGELGEPSTQ
DCVEKKDVSADFCLSEIVNHLNMSQYIFPKTVNDQTITLPCGANYDGVVT
RDCVFDGLSGKSFWTPVIWSCVRILPNTIEELLEIPITTENMVMVSRTLT
DITSNQTSLETPSDVVKVTMLMKECLNMDSQTVKEKSQKKEVVMNVLATL
DNILHLNTTILSTSSNNKQILDVIASVAKNSLDNPVSYNGPEFTFATAKV
SDKRDLKAIITSDPDSSTCKLKTMEVQFTDLVTTSNKTNTQTSKMVEIFI
PKSILKNQNISSANMIVHVFRKDKIFPQEIDKEITSNNLEKRRIRKVTSL
IMATSLYNKSISNTKEKIKITFKLKTMGEAKNALCTYWQEDKDTEKPGFW
SPRGCIKSNIITTENEEIYVVCSCTHLTNFAVLFNVYDAKVGAIKSNTAL
NIISFIGCVVSMVCLIATLICYLGLRDIRRRTARKILINFCFSLLFLLST
FMFGIEQTARPHVCHAVSALIHMFTLSTFFWMSVQAVFLYLSGTRCGNML
RHALL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033840XLOC_033840Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053650TCONS_00053650Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011641Tyr-kin_ephrin_A/B_rcpt-like
IPR000203GPS
IPR000832GPCR_2_secretin-like
IPR017981GPCR_2-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO:0004888transmembrane signaling receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
GO:0007166cell surface receptor signaling pathway
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007166 cell surface receptor signaling pathway
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
molecular_function GO:0004888 transmembrane signaling receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011641Tyrosine-protein kinase ephrin type A/B receptor-likeSMARTSM01411GCC2_GCC3_2coord: 238..279
e-value: 5.6E-4
score: 29.2
IPR000203GPS motifSMARTSM00303GPS_3coord: 631..689
e-value: 2.4E-8
score: 43.7
IPR000203GPS motifPFAMPF01825GPScoord: 634..683
e-value: 1.2E-11
score: 44.9
IPR000203GPS motifPROSITEPS50221GPScoord: 632..689
score: 14.179
NoneNo IPR availableGENE3D1.20.1070.10coord: 688..795
e-value: 6.1E-9
score: 34.7
NoneNo IPR availableGENE3D2.10.50.10coord: 232..302
e-value: 0.0013
score: 18.5
IPR000832GPCR, family 2, secretin-likePFAMPF000027tm_2coord: 699..791
e-value: 8.1E-13
score: 48.1
IPR017981GPCR, family 2-likePROSITEPS50261G_PROTEIN_RECEP_F2_4coord: 700..791
score: 13.117

Blast
[Close]
BLAST of TCONS_00053650-protein vs. Swiss-Prot (Human)
Match: AGRL3 (Adhesion G protein-coupled receptor L3 OS=Homo sapiens GN=ADGRL3 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 5.210e-22
Identity = 65/194 (33.51%), Postives = 101/194 (52.06%), Query Frame = 0 
Query:  604 TSLYNKSISNT---KEKIKITFK-LKTMGEAKNALCTYWQEDKDTEKPGFWSPRGCIKSNIITTENEEIYVVCSCTHLTNFAVLFNVYDAKVGAIKSNTALNIISFIGCVVSMVCLIATLICYLGLRDIR--RRTARKILINFCFSLLFLLSTFMFGIEQTARPHVCHAVSALIHMFTLSTFFWMSVQAVFLYL 791
            T+  NK  SN     + +  T K +K   E  N  C++W   K T   G+WS +GC    ++TT   + +  CSC HLTNFAVL    + K      +  L++I+++G ++S+VCL+  +  +   R ++  R T  K   N C SL      F+ GI +T +P  C   +AL+H F L+ F WM ++ V LY+
Sbjct:  770 TAAINKEFSNKVYLADPVVFTVKHIKQSEENFNPNCSFWSYSKRTMT-GYWSTQGC---RLLTTN--KTHTTCSCNHLTNFAVLMAHVEVKHSDAVHDLLLDVITWVGILLSLVCLLICIFTFCFFRGLQSDRNTIHK---NLCISLFVAELLFLIGINRTDQPIACAVFAALLHFFFLAAFTWMFLEGVQLYI 954
The following BLAST results are available for this feature:
BLAST of TCONS_00053650-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGRL35.210e-2233.51Adhesion G protein-coupled receptor L3 OS=Homo sap... [more]
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