TCONS_00053711-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053711-protein
Unique NameTCONS_00053711-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length359

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053711-protein ID=TCONS_00053711-protein|Name=TCONS_00053711-protein|organism=Clytia hemisphaerica|type=polypeptide|length=359bp
MCWNYVRRYWISFIIAFILVYTSYIVLYQKALENTEYKQRLDKIKPTVPT
DLYDQLKVLKWRLVQEKFRSTLLQQHLLKFHKRMQKKEFSNHIKRFGDTA
LTLPSLHRFLPQINEDHFKLSKLYTNNTDPRTIIYGVGIHSFGDVEDLIG
LLDSLFQNLDEKAKQDCLFVVYVNLERNSEDATSRLLQKYDSYVKSKLLD
IIIPPKNYYPKFDDIVGTFGAEPKVNIENLKSSLDSVFLMMYAALKGAFY
VRLSAKQRAEPGYSTKVRDFAIKRASMNEPWYELSFTKHECFGKLYQMSD
LSRLVPFILEYSNVKPCDWIIFGFVGTLVCNPEKGDCLKRIKDHRRQYRP
VLFKMPGET
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033874XLOC_033874Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053711TCONS_00053711Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006759Glyco_transf_54
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016758transferase activity, transferring hexosyl groups
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0016020 membrane
molecular_function GO:0016758 transferase activity, transferring hexosyl groups
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006759Glycosyl transferase family 54PFAMPF04666Glyco_transf_54coord: 98..355
e-value: 5.6E-42
score: 143.5

Blast
[Close]
BLAST of TCONS_00053711-protein vs. Swiss-Prot (Human)
Match: MGT4A (Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A OS=Homo sapiens GN=MGAT4A PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.452e-31
Identity = 93/326 (28.53%), Postives = 161/326 (49.39%), Query Frame = 0 
Query:   52 LYDQLKVLKWRLVQEKFRSTLLQQHLLKFHKRMQKKEFS-NHIKRFGDTALTL------------PSLHRFLPQI--NEDHFKLSKLYTNNTDPRTIIYGVGIHSFGDVEDLIGLLDSLFQNLDEKAKQDCLFVVYVNLERNSE---DATSRLLQKYDSYVKSKLLDIIIPPKNYYPKFDDIVGTFGAEPKVNIENLKSSLDSVFLMMYAALKGAFYVRLSAKQRAEPGYSTKVRDFAIKRASMNEPWYELSFTKHECFGKLYQMSDLSRLVPFILEYSNVKPCDWIIFGFVGTLVCNPEKG--DCLKRIKDHRRQYRPVLFKMPG 357
            L ++L++ + R+ Q   RS+ L   + +F +   +   S + + +F D  L L            PS++  LP +  NE   + +    N     +I+ G+          LI  L SL  NL  + K DC+ VV++  E + +      + L +++   + S L+++I PP++YYP   ++  TFG   +      K +LD  FLMMYA  KG +Y++L      +  Y   +++FA++ +S  E W  L F++    GK++Q  DL+ +V FI  +   KP DW++   +   VCNPEK    C ++  + R ++RP LF+  G
Sbjct:   44 LKERLRIAEHRISQ---RSSELNTIVQQFKRVGAETNGSKDALNKFSDNTLKLLKELTSKKSLQVPSIYYHLPHLLKNEGSLQPAVQIGNGRTGVSIVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIG-ETDIDYVHGVVANLEKEFSKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSS--EEWMILEFSQLGFIGKMFQAPDLTLIVEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVG 363
The following BLAST results are available for this feature:
BLAST of TCONS_00053711-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MGT4A2.452e-3128.53Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglu... [more]
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