TCONS_00053834-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053834-protein
Unique NameTCONS_00053834-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1444

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053834-protein ID=TCONS_00053834-protein|Name=TCONS_00053834-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1444bp
MCRRQARMLKYKILYTHQKLKKAKTWQDGILKYRLENKKATIYTESGTAL
DSLFVKPEELVDDADLESDKFLITVECQLKDEQNPNNAITVRATTTNVQS
KSCAPFVNEKQPRFQKFHAPSKVEVSKDERPSSQQLYSSVSKHQPSGIQY
TNQSLPLPDEKLPQLFSAHTKTTLIRNIEPSPDQSKKRRFDIEQTSAFND
QNYQSNEFQSKQNKNLHSQASFGHNIPTRVNNFERQFNTGYEATSRNLNP
IQFPVNSNAENQNDILQDCKEYLKKPRTEKRSTNDLLSLFGDSDDDEFFK
DSQEINDCVSSSKISDLRENPSPSSISERTNNSSKGSNCERTTNDFYTRH
SPELVSNETNIEDERDWTGDKEKENMVDEETPNHSLPSNKLKRATSGFFI
QPGNTDGLKFKFEENKTQQQVPSYATISHLPIPSRATTTFPNKPPHSSRF
NPPTSTHRHSNAQPTSNLHYPKFNPPTTAHSNLNRPGVDYAFPSKEQCKS
NPTPQREIKLPLQYESVSQYKHTFKQAILEHLNIILWSTSDRYHKAANNV
DLTQLSGTDSVDEPTDPNKPSCKHGPAILRSVKKEGKNKGRMFYTCSASS
DKRCNLFQWFDEPNKQNSSKTQTSAVQSAKSRKVTITDYRSLSTMLESHN
IQFYGHTKIMRKAMNFFNRKRKEPQARFDRPKKSLYLVLPFKRSSSFYNK
ADLWVISKTIDFTPGDTFVAKSVFYGPNSSCELEICPLASYSMSQWHENE
TYYAIQVYNASTELSCIENLXDYRSLSTMLESHNIQFYGQTKIMRKAMNF
FNRKRKEPQARFDRPKKSLYLVLPFKRSSSFYNKADLWVISKTIDFTPGD
TFVAKSVFYGPNSSCELEICPLASYSMSQWHGNEACYAIQVYNAFTELSC
IENLEENLRIHDVPVLKHVLLPHEDSTRDQNFHEPKDLSCLDENSIGELI
ENTIQNFSLNEDQAKALRHISGMFLKQALNSAHSAQGHTSFFEELPPNQI
KDITLIHGVFGAGKSFLLSVVVIFLLQVFELIEEQQRWESNTLKLMISST
TNVAVDRVLCALLEHGYDDFIRVGSLRKISKRILPNSLHAEDHEDQELRE
LNTILKSPLTDTEKDYVKKAIEAHKMGANRTRLNRVRVVGVTCAACSFPL
LKNLTFQVHLLDECSQMIEPLSMVPIARFHCQRLVLVGDPNQLSPTIQGS
ESAHPEGLEVTLFERLQKAGLDPIILRCQYRCHPAISLLCSKMFYKGMLT
DGVSTDDRGPLLDWLGPVSIADISDGKEATASDGSLFNVKEVQYCVKLVN
AILAEGLEPTQVGIITQYKAQVKRISNQLQESGVLSAMELKGVQISTVDA
FQGAEKDVIILSCVRTKFIGFINCPRRTNVALSRAKHHLIIVGCHRLLRT
DRLWGGVLELAEQEGASFGRGSDALLPPDKYVENKDSITDDFEC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033970XLOC_033970Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053834TCONS_00053834Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010666Znf_GRF
IPR018838DUF2439
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 955..1236
e-value: 5.8E-18
score: 64.4
NoneNo IPR availableGENE3D3.40.50.300coord: 1237..1414
e-value: 5.1E-33
score: 113.7
NoneNo IPR availablePFAMPF13087AAA_12coord: 1208..1395
e-value: 1.2E-48
score: 165.3
NoneNo IPR availablePFAMPF13086AAA_11coord: 1112..1197
e-value: 9.5E-16
score: 58.3
IPR010666Zinc finger, GRF-typePFAMPF06839zf-GRFcoord: 570..612
e-value: 4.2E-13
score: 49.1
IPR018838Domain of unknown function DUF2439PFAMPF10382DUF2439coord: 10..83
e-value: 1.2E-17
score: 63.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1001..1404

Blast
BLAST of TCONS_00053834-protein vs. Swiss-Prot (Human)
Match: ZGRF1 (Protein ZGRF1 OS=Homo sapiens GN=ZGRF1 PE=1 SV=3)

HSP 1 Score: 551.592 bits (1420), Expect = 9.174e-167
Identity = 300/670 (44.78%), Postives = 422/670 (62.99%), Query Frame = 0
Query:  770 LXDYRSLSTMLESHNIQFYGQTKIMRKAMNFFNRKRKEPQARF--------DRPKKSLYLVLPFKRSSSFYNKADLWVISKTIDFTPGDTFVAKSVFYGPNSSCELEICPLASYSMSQWHGNEACYAIQVYNAFTELSCIENLEENLRIHDVPVLKHVL------LPHEDSTRDQNFHEPK------DLSCLDENSIGELIENTIQNFSLNEDQAKALRHISGMFLK-QALNSAHSAQGHTSFFEELPPNQIKDITLIHGVFGAGKSFLLSVVVIFLLQVFELIEEQQRWESNTLKLMISSTTNVAVDRVLCALLEHGYDDFIRVGSLRKISKRILPNSLHA-EDHEDQELRELNTILKSPLTDTEKDYVKKAIEAHKMGANRTRLNRVRVVGVTCAACSFPLLKNLTFQVHLLDECSQMIEPLSMVPIARFHCQRLVLVGDPNQLSPTIQGSESAHPEGLEVTLFERLQKAGLDPIILRCQYRCHPAISLLCSKMFYKGMLTDGVSTDDRGPLLDWLGPVSIADISDGKEATASDGSLFNVKEVQYCVKLVNAILAEGLEPTQVGIITQYKAQVKRISNQLQESGVLSAM-----ELKGVQISTVDAFQGAEKDVIILSCVRTKFIGFINCPRRTNVALSRAKHHLIIVGCHRLLRTDRLWGGVLELAE 1412
            L D +S+   L S  I  Y + +++ +    F RK+     +F        + PK  LYL L  K  SS Y+K DLWV+SKT+DF   DTF+A S F+GP+S  E+EI PL  Y  S W  N   +A+ V NA TEL+ ++N+++      +P+ +++L      +        + F  P           L   +  +L    IQ   LN+DQA AL  I+ M    +++      Q HT      P      IT+IHGVFGAGKS+LL+VV++F +Q+FE  E      +   KL+ISS+TNVAVDRVL  LL  G+++FIRVGS+RKI+K ILP SLHA  ++E ++L+EL+ ++K  LT TE+ YV+K+IE HK+G NRT L +VRVVGVTCAAC FP + +L F V +LDECSQ+ EP S++PIARF C++L+LVGDP QL PTIQGS++AH  GLE TLF+RL   G  PI+LR QYRCHPAIS + + +FYKG L +GV+  +R PLL+WL  +   ++  G E    D S  NV E  + +KL+ +++A G+  + +G+IT YK+Q+ ++ +      +LSA+     ++K VQ+STVDAFQGAEK++IILSCVRT+ +GFI+  +R NVAL+R K HL+IVG    LR ++LWG V++  E
Sbjct: 1407 LSDIKSIGLYLRSQKIPLYEECQLLVRKGFDFQRKQYGKLKKFTTVNPEFYNEPKTKLYLKLSRKERSSAYSKNDLWVVSKTLDFEL-DTFIACSAFFGPSSINEIEILPLKGYFPSNWPTNMVVHALLVCNASTELTTLKNIQDYFNPATLPLTQYLLTTSSPTIVSNKRVSKRKFIPPAFTNVSTKFELLSLGATLKLASELIQVHKLNKDQATALIQIAQMMASHESIEEVKELQTHT-----FP------ITIIHGVFGAGKSYLLAVVILFFVQLFEKSEAPTIGNARPWKLLISSSTNVAVDRVLLGLLSLGFENFIRVGSVRKIAKPILPYSLHAGSENESEQLKELHALMKEDLTPTERVYVRKSIEQHKLGTNRTLLKQVRVVGVTCAACPFPCMNDLKFPVVVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPILLRTQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLEWLPTLCFYNVK-GLEQIERDNSFHNVAEATFTLKLIQSLIASGIAGSMIGVITLYKSQMYKLCH------LLSAVDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTRQVGFIDSEKRMNVALTRGKRHLLIVGNLACLRKNQLWGRVIQHCE 2057          

HSP 2 Score: 198.749 bits (504), Expect = 4.450e-51
Identity = 116/305 (38.03%), Postives = 166/305 (54.43%), Query Frame = 0
Query:  487 GVDYAFPSKEQCKSNPTPQREIKLPLQYESVSQYKHTFKQAILEHLNIILWSTSDRYHKAANNVDL---TQLSGTDSVDEPTDPNKPSCKHG-PAILRSVKKEGKNKGRMFYTCSASSDKRCNLFQWFDEPNKQNSSKTQTSAVQSAKSRKVTITDYRSLSTMLESHNIQFYGHTKIMRKAMNFFNRKRKEPQARF--------DRPKKSLYLVLPFKRSSSFYNKADLWVISKTIDFTPGDTFVAKSVFYGPNSSCELEICPLASYSMSQWHENETYYAIQVYNASTELSCIENLXDYRSLSTM 779
            G +  FPS ++ KS   PQR+I +P  ++S + YK TF   ++EHLNI+L+  +    KA + VD+   T L G    +   + N PSC H  PA L  VKKEG NKGR+FYTC      RC  F+W ++        T   + Q      + ++D +S+   L S  I  Y   +++ +    F RK+     +F        + PK  LYL L  K  SS Y+K DLWV+SKT+DF   DTF+A S F+GP+S  E+EI PL  Y  S W  N   +A+ V NASTEL+ ++N+ DY + +T+
Sbjct: 1263 GSELCFPSGQKIKSAYLPQRQIHIPAVFQSPAHYKQTFTSCLIEHLNILLFGLAQNLQKALSKVDISFYTSLKGEKLKN--AENNVPSCHHSQPAKLVMVKKEGPNKGRLFYTCDGPKADRCKFFKWLED-------VTPGYSTQEGARPGMVLSDIKSIGLYLRSQKIPLYEECQLLVRKGFDFQRKQYGKLKKFTTVNPEFYNEPKTKLYLKLSRKERSSAYSKNDLWVVSKTLDFEL-DTFIACSAFFGPSSINEIEILPLKGYFPSNWPTNMVVHALLVCNASTELTTLKNIQDYFNPATL 1557          
The following BLAST results are available for this feature:
BLAST of TCONS_00053834-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZGRF19.174e-16744.78Protein ZGRF1 OS=Homo sapiens GN=ZGRF1 PE=1 SV=3[more]
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