TCONS_00053845-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053845-protein
Unique NameTCONS_00053845-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length380

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053845-protein ID=TCONS_00053845-protein|Name=TCONS_00053845-protein|organism=Clytia hemisphaerica|type=polypeptide|length=380bp
MKLTMLTPPTIEKITDDVQSAIGLKFSIECVANGNPMPTVTLKQGGVDLV
PADSKTDTTLINKRTVLYEVSSATKEDFQDIDCIASNDIGSTNKTVKLIE
VVRAEPPDGLERYGDAGLKYIVLSWDKVMSADSYLIYVNDTEPPRTIKTD
ETSHQVQNLKQNTIYLFNVASVNLAGVGANTSIVLSTSDIIPPGNVTNVQ
ASDLTTTTVLIRWEQPENIEGIDILYRISYCQLNNGTLVGACKSEDQKDN
SLQLTDLEVGSTYQVKISAVNQKVVGHQTTFNFTTLEEKVTPPPPAPTNK
KKGMSTGAIAGVIIAILLIILLVVDLFCCFFNQCGFTHCCTETFCANKSA
KYQPTDTKDGENMDETAELKPKNISKEDVV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033978XLOC_033978Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053845TCONS_00053845Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR013783Ig-like_fold
IPR013098Ig_I-set
IPR007110Ig-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 104..178
e-value: 0.011
score: 24.9
coord: 193..276
e-value: 1.1E-9
score: 48.2
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 195..277
e-value: 1.1E-12
score: 48.0
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 106..191
score: 10.699
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 192..294
score: 17.886
IPR003961Fibronectin type IIICDDcd00063FN3coord: 121..184
e-value: 3.99817E-5
score: 40.1723
IPR003961Fibronectin type IIICDDcd00063FN3coord: 193..285
e-value: 3.22543E-14
score: 66.7511
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 119..286
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1..107
e-value: 1.4E-10
score: 40.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 108..189
e-value: 1.3E-9
score: 37.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 191..302
e-value: 6.9E-17
score: 61.2
NoneNo IPR availableGENE3D1.20.5.100coord: 303..333
e-value: 1.7E-6
score: 27.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 352..380
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 9..98
e-value: 4.9E-6
score: 26.4
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 9..99
score: 7.068
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 2..98

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053845-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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