TCONS_00054599-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054599-protein
Unique NameTCONS_00054599-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length253

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054599-protein ID=TCONS_00054599-protein|Name=TCONS_00054599-protein|organism=Clytia hemisphaerica|type=polypeptide|length=253bp
MTSFNSPSQHSPKMNEASNEEKTGDSEQVQIPFEASMARLIVYCISVPYK
HGETNPNCCEMHYFSENQISTLVEKCPLEMIYLTQRKFIRTYPKASRVDS
SNYNPMLSWRHGIQMAAINVQKPDNGFYINDGLFIKSNGTGYVFKPSQMT
TKGSTYHPQMTKPATGDFSQRMKIEIFCGQFVESEHFTDLPVAIEMEIIG
AVEKDCQSFYTEPSNNLFNPVWERSTFTFDLSLPSMCLLLVKVVSVSRVN
RLV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034408XLOC_034408Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054599TCONS_00054599Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001192PI-PLC_fam
IPR001711PLipase_C_Pinositol-sp_Y
IPR017946PLC-like_Pdiesterase_TIM-brl
Vocabulary: Biological Process
TermDefinition
GO:0035556intracellular signal transduction
GO:0007165signal transduction
GO:0006629lipid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004435phosphatidylinositol phospholipase C activity
GO:0008081phosphoric diester hydrolase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0035556 intracellular signal transduction
biological_process GO:0006629 lipid metabolic process
biological_process GO:0007165 signal transduction
molecular_function GO:0004435 phosphatidylinositol phospholipase C activity
molecular_function GO:0008081 phosphoric diester hydrolase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 246..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
IPR001192Phosphoinositide phospholipase C familyPRINTSPR00390PHPHLIPASECcoord: 88..109
score: 54.55
coord: 109..127
score: 41.11
IPR001711Phospholipase C, phosphatidylinositol-specific, Y domainSMARTSM00149plcy_3coord: 37..150
e-value: 3.5E-33
score: 126.2
IPR001711Phospholipase C, phosphatidylinositol-specific, Y domainPFAMPF00387PI-PLC-Ycoord: 38..147
e-value: 3.2E-29
score: 101.5
IPR001711Phospholipase C, phosphatidylinositol-specific, Y domainPROSITEPS50008PIPLC_Y_DOMAINcoord: 37..149
score: 32.513
IPR017946PLC-like phosphodiesterase, TIM beta/alpha-barrel domainGENE3D3.20.20.190coord: 2..161
e-value: 1.2E-37
score: 129.2
IPR017946PLC-like phosphodiesterase, TIM beta/alpha-barrel domainSUPERFAMILY51695PLC-like phosphodiesterasescoord: 27..159

Blast
[Close]
BLAST of TCONS_00054599-protein vs. Swiss-Prot (Human)
Match: PLCB3 (1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Homo sapiens GN=PLCB3 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 1.957e-25
Identity = 69/238 (28.99%), Postives = 113/238 (47.48%), Query Frame = 0 
Query:    9 QHSPKMNEASNEEKTGDSEQVQIPFEASMARLIVYCISVPYKHGET---NPNCCEMHYFSENQISTLVEKCPLEMIYLTQRKFIRTYPKASRVDSSNYNPMLSWRHGIQMAAINVQKPDNGFYINDGLFIKSNGTGYVFKPSQMTTKGSTYHPQMTKPATGDFSQRMKIEIFCGQFVESEHFTDLPVAIEMEIIGAVEKDCQSFYTEPSN-NLFNPVWERSTFTF-DLSLPSMCLLLV 241
            Q  PK  + + +E T  SE   +     M+ L+ Y   V +K  E       C EM  F E +    + K P+E +   +++  R YPK +RVDSSNY P L W  G Q+ A+N Q  D    +N G+F  +  +GY+ KP  M     ++ P       G  +  +++++  GQF+       + + +E+++ G      + + T  S  N FNPVW+   F F  + LP++  L +
Sbjct:  567 QTDPK--KPTTDEGTASSE---VNATEEMSTLVNYIEPVKFKSFEAARKRNKCFEMSSFVETKAMEQLTKSPMEFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDVAMQLNAGVFEYNGRSGYLLKPEFMRRPDKSFDPFTEVIVDGIVANALRVKVISGQFLSDR---KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRI 796
The following BLAST results are available for this feature:
BLAST of TCONS_00054599-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PLCB31.957e-2528.991-phosphatidylinositol 4,5-bisphosphate phosphodie... [more]
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