TCONS_00054940-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054940-protein
Unique NameTCONS_00054940-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length467

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054940-protein ID=TCONS_00054940-protein|Name=TCONS_00054940-protein|organism=Clytia hemisphaerica|type=polypeptide|length=467bp
MGVREFSIMLDSNRQVFYPGETVTGNVILDLQGQMSMKGITIEFEGKSFC
HWTEQTWEGTGEDRRQVTKHIEGKEKYFENKTCLFGAISGGHTRIHPHGH
FKYPFVFNIPQSVPSSFEGSHGRIRFELKAEIDIPGKRDIKTRRPITINE
IVDTNNPNYGQSPNGRLTKEVGCLCWKAGNLDVEGHIDRKCYCPGELILV
NSQVQNQTTKDMKALKAKLYQDILYIAEGHKQKRENKVIVRIDGPQIPQG
KNETWSNRPLAIPACPPSISKSSIIKVSYMVRVEVDVPWGIDPKIEMPII
LGTVPYRGTYGQPQQYGLPQEQMPVPENNFSNTPQMPPAPSNMLGYPDMA
PPAYAAAVGSSRVNVHQDDNSELMGNSMYIPAYTFAAPYKGSMKIEQGSM
NPQQPTAPPAGYPPQQPGYPPVQPGYPPTQPGYPPQQPNNLIGFDGSAYP
AAHPGYQPQPGMAAGPY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034626XLOC_034626Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054940TCONS_00054940Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011022Arrestin_C-like
IPR011021Arrestin-like_N
IPR014756Ig_E-set
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011022Arrestin C-terminal-like domainSMARTSM01017Arrestin_C_2coord: 2..151
e-value: 1.7
score: 7.2
coord: 177..306
e-value: 6.0E-24
score: 95.6
IPR011022Arrestin C-terminal-like domainPFAMPF02752Arrestin_Ccoord: 179..305
e-value: 5.8E-20
score: 72.0
NoneNo IPR availableGENE3D2.60.40.640coord: 160..375
e-value: 2.7E-19
score: 69.4
coord: 4..158
e-value: 1.4E-9
score: 37.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 395..467
IPR011021Arrestin-like, N-terminalPFAMPF00339Arrestin_Ncoord: 6..155
e-value: 6.7E-32
score: 110.5
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 4..158
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 167..331

Blast
[Close]
BLAST of TCONS_00054940-protein vs. Swiss-Prot (Human)
Match: ARRD3 (Arrestin domain-containing protein 3 OS=Homo sapiens GN=ARRDC3 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.665e-47
Identity = 106/311 (34.08%), Postives = 169/311 (54.34%), Query Frame = 0 
Query:    6 FSIMLDSNRQVFYPGETVTGNVILDLQGQMSMKGITIEFEGKSFCHWTEQTWEGTGEDRRQ-VTKHIEGKEKYFENKTCLFG-------AISGGHTRIHPHGHFKYPFVFNIPQS-VPSSFEGSHGRIRFELKAEIDIPGKRDIKTRRPITINEIVDTNNPNYGQSPNGRLTKEVGCLCW--KAGNLDVEGHIDRKCYCPGELILVNSQVQNQTTKDMKALKAKLYQDILYIAEGHKQKRENKVIVRIDGPQIPQGKNETWSNRPLAIPACPPSISKSSIIKVSYMVRVEVDVPWGIDPKIEMPIILGTVP 305
            F  + DSN  V+  G+TV+G V L++ G++ +K + I   G +   WTE    G+     Q  T+ +E    YF +K  L G       +  G HT IH  G  +Y F F +PQ+ + +SFEG HG +R+ +KAE+  P    +K ++  T+ E +D N P+      G  TKE    CW   +G + +   I+RK Y PGE I + ++++N +++ M   KA +YQ   + A+G K K   +++  + G  +  GK ETW+ + L IP   PSI   SII+V Y + V VD+P  +D  + +P+++GT+P
Sbjct:   13 FDCLNDSNVPVYSSGDTVSGRVNLEVTGEIRVKSLKIHARGHAKVRWTESRNAGSNTAYTQNYTEEVE----YFNHKDILIGHERDDDNSEEGFHT-IHS-GRHEYAFSFELPQTPLATSFEGRHGSVRYWVKAELHRPWLLPVKLKKEFTVFEHIDINTPSLLSPQAG--TKEKTLCCWFCTSGPISLSAKIERKGYTPGESIQIFAEIENCSSR-MVVPKAAIYQTQAFYAKG-KMKEVKQLVANLRGESLSSGKTETWNGKLLKIPPVSPSILDCSIIRVEYSLMVYVDIPGAMDLFLNLPLVIGTIP 313
The following BLAST results are available for this feature:
BLAST of TCONS_00054940-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARRD31.665e-4734.08Arrestin domain-containing protein 3 OS=Homo sapie... [more]
back to top