TCONS_00055213-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055213-protein
Unique NameTCONS_00055213-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2204

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055213-protein ID=TCONS_00055213-protein|Name=TCONS_00055213-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2204bp
SSKALNRCQHKCMNNMGSFTCACNKGYKLLPDGKSCQDINECSTLNGGCN
QICTNRPGSFQCSCRRGFRLSSDGKTCKDINECSEQKPCDNNNGICKNTF
GSYRCSCKVGYQLLSNKKTCKDINECSKKELNGCQHKCSNTVGSFVCSCI
FGYRLNADKKKCDDINECIEQTDKCGHNCHNTIGLYTCSCRPGYRLNGDK
VSCKALPCVTVSSLNHGNISCTGYVTDQSCSYECHSGFDLLGSGQRTCLP
SSQWSGNAPQCQRKDCPTIEAPEHGSIMIPCVAKYGFKCLKKCSKGFFLD
GTISAKCVMEGNQTSWTAKDSICRASTPCEPNPCLNNGQCLETSIDTFVC
DCSGTLYKGKLCDIGIVDIPTLPQLVLNQWSTDIEIMARPTAFVNIVPKS
RVELTFDPPEIRIEVPETSAKFQILSSKTGVFEVEFEIQGRNDFEFETPK
SKQVYVFPKKTSLLVDIDTSTVIDNAKLTQRNLTDSLVLKSMCPNGGNIV
GFTTIQSKSIVLPVSMVGVEKVTLTALKERGMLNPVYEIESFLKTRKIPV
FDYQCVNATSELAEQVEYAIKYNFFQAAYLKKFTASMPTWFELSKTFSEP
EYNSANLASQLVTLEDIFSLKCYATDSQGKNKLSKGIHSLYQPYTPVLLK
ILDKKFEMSKTNRICYFANLEENSFHIKSDSPVNFISSPSPDHIFEKLQS
SYMSVSPTKEEVFVDFSMKMKSFDGRFKGKGFVALEDSDKFFTRMFNSQN
KIPGNIALDFDVKLKFLGKTLAVEGKSTQADYNMTLSGKRDATLKLTTSV
NQMKFQLPNAAIRFSPRAKSKLSIEIPMLATGGQIRSISNENALKTYSRY
LTRAERNSEGVGNLLATLDQKLADIWSSKTTEYFKHLGNFNTFVMRGINS
TNYYEAINSLQPVKESYINFKSFANVLVENFENENANQRLVLTLRNVLRA
LSRTDQLEILPQLEPIKFFDVNGLQMKYSGGLCIYQLCFPSMGSIEIDSP
FNKNHITIKSNLTTFNASSRLHFTEKDNLQINVDKHIGTFTATLTGNLKV
FDRIFPIHFSFDQNQLSYSSTISIEGFPSTGFIVSKTKQISNVQWEDMID
SIKGETLETKLLQNRASIAFQKISETTKTRLNLIKQRKSESQKKYQSQMD
EVKCARERFEKATLEFNKKDSDYKAKLLDYQKAQNRYSSLLKQNTSLLLI
ERDVSTVCSLKKCKDKCIPMMKCDICQKPVKIPTKHWDCNTKIETVRTSQ
LVETDVTCQETKYFFIPIYTGDCEEDPRKRGYRKQQEAEYLSTVARGSSV
GAMIGSVIPVIGSFLGGIIGAIIGLIGGLFSSCDETYEVITKKTVNRWPC
KNWTMQVVSTKVPKTKCALQEILVNGGFSDPKQCNCRQEECSVKANDYSC
IKKNKDCQTERKKRLEKLGKGSRLHIYFKQLSSNIDRLEDETDLLFSEAE
RTRKDKDFAINALNRTINGLRVAEQESKQANKSQDNQQDILRKEICLYDK
YNVNNRQLPLVIEKLSLKNKLPIIDNIQMIAKVKELSTGKTQDVPCVLQL
DDPESSIEAASRKILYSVLCESSRKRRSLDGDVLDEDHILAFTSWDVRQN
STIAEKSCMTFRTTTDFIKDSYKELVNLLHQGNGVQDLTSTVSTSLSRLR
KDLNASKDADLIYDSQSKLLSSMHSEINGYQNRSDIPNLLETWKEKVEIY
TAENNFTVCFGFHDCLETALESLENLPLVSVQYLQTYKNTMVKLRAVSNE
ITNTNAGESSFGDLFNKTSTFDTLLSSLSDTSLHCSKKPEVKANGETEFH
VHFGNSVELECGEVNSTLPVKYNWKLHGEFIDGAYESNMKFEATLAKAGV
YTCIVTSSVGQIESEGILVNVFESPKILSEPEDVKLFNLTSNENATFICD
VSGYPLPNITWYYQTFHHNDQAKLPNDEPELVLENLTKADNGYYFCKATN
EYGSITSRKAKLDILKTELPRQYIRLGIDILDIEKSTNSTSNETSDGEID
ELPELLRSSDLQDITFFLLKKSNKMTAKFIIESLTPENITSSMKDLLKLS
TTSRQSLANSAANLVNLVFTNESRIYLENDVVLTVDNTSMSYQAILNECN
PGYQLHSNGILCVECSSGSFSTNRRKCKPCPKNHFMPNTGSRRCTRCENK
LITSEIGSTSSYQCFDKIESTSIISEMFSSSSISPEMSSSLSPSQSPSPS
PSPS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034772XLOC_034772Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055213TCONS_00055213Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003599Ig_sub
IPR000742EGF-like_dom
IPR001881EGF-like_Ca-bd_dom
IPR000436Sushi_SCR_CCP_dom
IPR003598Ig_sub2
IPR011641Tyr-kin_ephrin_A/B_rcpt-like
IPR026823cEGF
IPR013783Ig-like_fold
IPR018097EGF_Ca-bd_CS
IPR013032EGF-like_CS
IPR000152EGF-type_Asp/Asn_hydroxyl_site
IPR007110Ig-like_dom
IPR009030Growth_fac_rcpt_
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1142..1162
NoneNo IPR availableCOILSCoilCoilcoord: 1435..1455
NoneNo IPR availablePFAMPF13927Ig_3coord: 1875..1950
e-value: 3.3E-12
score: 46.7
NoneNo IPR availableGENE3D2.40.155.10coord: 21..40
e-value: 1.2E-11
score: 44.0
NoneNo IPR availableGENE3D2.10.25.10coord: 2..20
e-value: 0.007
score: 15.8
NoneNo IPR availableGENE3D2.10.25.10coord: 80..102
e-value: 1.9E-11
score: 43.4
coord: 123..145
e-value: 7.0E-9
score: 35.1
coord: 41..60
e-value: 2.0E-9
score: 36.9
NoneNo IPR availablePFAMPF14670FXa_inhibitioncoord: 42..77
e-value: 1.4E-10
score: 41.2
NoneNo IPR availableGENE3D2.10.50.10coord: 2099..2164
e-value: 2.4E-6
score: 27.3
NoneNo IPR availableGENE3D2.10.25.10coord: 323..369
e-value: 8.4E-8
score: 31.4
NoneNo IPR availableGENE3D2.10.70.10coord: 201..262
e-value: 8.9E-14
score: 51.2
NoneNo IPR availableGENE3D2.10.25.10coord: 146..165
e-value: 1.1E-11
score: 43.9
coord: 103..122
e-value: 6.7E-13
score: 47.8
coord: 61..79
e-value: 5.5E-14
score: 51.3
NoneNo IPR availableGENE3D2.10.25.10coord: 166..200
e-value: 1.2E-12
score: 47.3
NoneNo IPR availableGENE3D2.10.70.10coord: 263..322
e-value: 3.8E-6
score: 26.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2183..2204
NoneNo IPR availableCDDcd00054EGF_CAcoord: 79..121
e-value: 3.4497E-9
score: 54.1798
NoneNo IPR availableCDDcd00054EGF_CAcoord: 122..155
e-value: 3.43681E-5
score: 42.6238
NoneNo IPR availableCDDcd00096Igcoord: 1895..1957
e-value: 1.51032E-8
score: 53.2619
NoneNo IPR availableCDDcd00054EGF_CAcoord: 164..196
e-value: 4.58867E-6
score: 45.3202
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 36..85
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 6..45
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 327..364
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 1796..1872
e-value: 0.64
score: 19.1
coord: 1884..1965
e-value: 2.8E-8
score: 43.5
IPR000742EGF-like domainSMARTSM00181egf_5coord: 7..37
e-value: 2.3
score: 17.2
coord: 167..204
e-value: 0.0074
score: 25.5
coord: 41..78
e-value: 3.8E-4
score: 29.8
coord: 82..121
e-value: 6.1E-8
score: 42.4
coord: 328..363
e-value: 0.049
score: 22.8
coord: 125..163
e-value: 0.0075
score: 25.5
IPR000742EGF-like domainPFAMPF00008EGFcoord: 329..360
e-value: 4.0E-5
score: 23.7
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 79..121
score: 14.251
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 122..163
score: 9.353
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 38..78
score: 7.675
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 325..363
score: 15.506
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 164..204
score: 7.926
IPR001881EGF-like calcium-binding domainSMARTSM00179egfca_6coord: 122..163
e-value: 1.2E-8
score: 44.7
coord: 329..363
e-value: 1.4
score: 0.7
coord: 7..37
e-value: 0.0046
score: 20.6
coord: 38..78
e-value: 1.6E-10
score: 51.0
coord: 79..121
e-value: 1.5E-12
score: 57.7
coord: 164..204
e-value: 9.3E-9
score: 45.1
IPR001881EGF-like calcium-binding domainPFAMPF07645EGF_CAcoord: 164..203
e-value: 1.2E-7
score: 31.7
IPR000436Sushi/SCR/CCP domainSMARTSM00032CCP_2coord: 208..261
e-value: 1.7E-10
score: 50.9
coord: 266..323
e-value: 0.0033
score: 26.6
IPR000436Sushi/SCR/CCP domainPFAMPF00084Sushicoord: 208..261
e-value: 9.7E-7
score: 29.2
IPR000436Sushi/SCR/CCP domainPROSITEPS50923SUSHIcoord: 201..263
score: 10.322
IPR000436Sushi/SCR/CCP domainPROSITEPS50923SUSHIcoord: 264..325
score: 7.536
IPR000436Sushi/SCR/CCP domainCDDcd00033CCPcoord: 208..262
e-value: 1.41389E-10
score: 58.6284
IPR000436Sushi/SCR/CCP domainSUPERFAMILY57535Complement control module/SCR domaincoord: 208..275
IPR000436Sushi/SCR/CCP domainSUPERFAMILY57535Complement control module/SCR domaincoord: 261..324
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 1890..1953
e-value: 8.0E-11
score: 52.0
coord: 1802..1860
e-value: 0.26
score: 12.8
IPR011641Tyrosine-protein kinase ephrin type A/B receptor-likeSMARTSM01411GCC2_GCC3_2coord: 2118..2164
e-value: 4.9E-8
score: 42.7
IPR011641Tyrosine-protein kinase ephrin type A/B receptor-likePFAMPF07699Ephrin_rec_likecoord: 2122..2164
e-value: 8.1E-7
score: 28.6
IPR026823Complement Clr-like EGF domainPFAMPF12662cEGFcoord: 18..41
e-value: 1.3E-10
score: 40.9
coord: 102..125
e-value: 1.2E-8
score: 34.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1902..1958
e-value: 1.1E-13
score: 50.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1782..1855
e-value: 2.0E-5
score: 24.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1856..1901
e-value: 0.015
score: 14.9
IPR018097EGF-like calcium-binding, conserved sitePROSITEPS01187EGF_CAcoord: 79..105
IPR018097EGF-like calcium-binding, conserved sitePROSITEPS01187EGF_CAcoord: 164..188
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 105..120
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 188..203
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 62..77
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 147..162
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 138..149
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 96..107
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 53..64
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 179..190
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 1789..1869
score: 8.284
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 1875..1963
score: 12.041
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 1899..1962
coord: 1798..1853
IPR009030Growth factor receptor cysteine-rich domainSUPERFAMILY57184Growth factor receptor domaincoord: 2098..2157
IPR009030Growth factor receptor cysteine-rich domainSUPERFAMILY57184Growth factor receptor domaincoord: 82..208

Blast
[Close]
BLAST of TCONS_00055213-protein vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 2.189e-41
Identity = 95/250 (38.00%), Postives = 119/250 (47.60%), Query Frame = 0 
Query:    4 ALNRCQHKCMNNMGSFTCACNKGYKLLPDGKSCQDINECSTLNGGCN--QICTNRPGSFQC--SCRRGFRLSSDGKTCKDINECSEQKPCDNNNGICKNTFGSYRCSCKVGYQLLSNKKTCKDINECSK---------------------------KELNG--------------CQHK--CSNTVGSFVCSCIFGYRLNADKKKCDDINECIEQTDKCGHNCHNTIGLYTCSCRPGYRLNGDKVSCKAL 206
            A N C H C N MG++ C+C KG  +  DG++CQDI+EC+     C+  Q C N  GS++C   C  GFR +SDG +C+DINEC E  PC      C N  GS+ C C+ GYQL   K  C D+NEC +                           K  NG              C++   C NT GS+ C C  GYR     + C DINEC +    C H C NT G + C C PG  L GD  SC  L
Sbjct: 5113 AGNPCSHSCHNAMGTYYCSCPKGLTIAADGRTCQDIDECALGRHTCHAGQDCDNTIGSYRCVVRCGSGFRRTSDGLSCQDINECQESSPCHQR---CFNAIGSFHCGCEPGYQLKGRK--CMDVNECRQNVCRPDQHCKNTRGGYKCIDLCPNGMTKAENGTCIDIDECKDGTHQCRYNQICENTRGSYRCVCPRGYRSQGVGRPCMDINECEQVPKPCAHQCSNTPGSFKCICPPGQHLLGDGKSCAGL 5357

HSP 2 Score: 132.109 bits (331), Expect = 3.163e-30
Identity = 84/269 (31.23%), Postives = 123/269 (45.72%), Query Frame = 0 
Query:   23 CNKGYKLLPDGKSCQDINECSTLNGGCNQICTNRPGSFQCSCRRGFRLSSDGKTCKDINECSEQKPCDNNNGICKNTFGSYRC--SCKVGYQLLSNKKTCKDINECSKKELNGCQHKCSNTVGSFVCSCIFGYRL----------------------------------------NADKKKCDDINECIEQTDKCGHN--CHNTIGLYTCSCRPGYRLNGDKVSCKALPCVTVSSLNHGNISCTGYVTDQSCSYE--CHSGFDLLGSGQ 245
            C  G+ L   G  C D +EC+  N  C+  C N  G++ CSC +G  +++DG+TC+DI+EC+  +   +    C NT GSYRC   C  G++  S+  +C+DINEC  +E + C  +C N +GSF C C  GY+L                                         A+   C DI+EC + T +C +N  C NT G Y C C  GYR  G        PC+ ++        C    ++   S++  C  G  LLG G+
Sbjct: 5092 CPSGFTLDSVGPFCADEDECAAGNP-CSHSCHNAMGTYYCSCPKGLTIAADGRTCQDIDECALGRHTCHAGQDCDNTIGSYRCVVRCGSGFRRTSDGLSCQDINEC--QESSPCHQRCFNAIGSFHCGCEPGYQLKGRKCMDVNECRQNVCRPDQHCKNTRGGYKCIDLCPNGMTKAENGTCIDIDECKDGTHQCRYNQICENTRGSYRCVCPRGYRSQG-----VGRPCMDINECEQVPKPCAHQCSNTPGSFKCICPPGQHLLGDGK 5352

HSP 3 Score: 124.405 bits (311), Expect = 5.799e-28
Identity = 77/229 (33.62%), Postives = 104/229 (45.41%), Query Frame = 0 
Query:    7 RCQHKCMNNMGSFTCACNKGYKLLPDGKSCQDINECSTLNGGCNQICTNRPGSFQCSCRRGFRLSSDGKTCKDINE------------CSEQKPCDNNNGICKN---------TFGSYRCS--------------CKVGYQLLSNKKTCKDINECSKKELNGCQHKCSNTVGSFVCSCIFGYRLNADKKKCDDINECIEQTDKCGHN--CHNTIGLYTC---SCRPGYR 195
            R    C N  GS+ C C +GY+    G+ C DINEC  +   C   C+N PGSF+C C  G  L  DGK+C  +               +   P  NN    ++         ++  YR S              C  G +  ++  TC DI+EC  +  + CQH+C NT GS+ C C  GY+L  + K C DI+EC+EQ   CG N  C N  G Y C    C P Y+
Sbjct: 5284 RYNQICENTRGSYRCVCPRGYRSQGVGRPCMDINECEQVPKPCAHQCSNTPGSFKCICPPGQHLLGDGKSCAGLERLPNYGTQYSSYNLARFSPVRNNYQPQQHYRQYSHLYSSYSEYRNSRTSLSRTRRTIRKTCPEGSE--ASHDTCVDIDEC--ENTDACQHECKNTFGSYQCICPPGYQLTHNGKTCQDIDECLEQNVHCGPNRMCFNMRGSYQCIDTPCPPNYQ 5508
The following BLAST results are available for this feature:
BLAST of TCONS_00055213-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HMCN12.189e-4138.00Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2[more]
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