TCONS_00057094-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00057094-protein
Unique Name	TCONS_00057094-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	313

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00057094-protein ID=TCONS_00057094-protein|Name=TCONS_00057094-protein|organism=Clytia hemisphaerica|type=polypeptide|length=313bp
MQHMVETVDTRGPAFEVGLKENDLITHVNNEAIQGYQHVDVVRLILRSGE
TVKLTVTDIERTSIRTGSKRKTVGNRVQSRKLRGRSRNSSVEDSGRSSAG
GAISRKSAIYRKLRKPSLRRNSSLKRAKKSNLFIPGASFDARRAANAMEG
GDQANASSATSPTGGGSTSPNSPNTHSSKNAFLHGMLPKLARTVGAHSRR
RSISCIPVSPLARTPSIGAASVRSPSPLATKNGGTVMSPTNNFTRPKSST
MTPGSPLLRRALSPDRLNAPVQFEDLVNSRDGTLLVPANETGVDRRLNRS
QSMKENKRKKHRR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_035965	XLOC_035965	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00057094	TCONS_00057094	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001478	PDZ

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001478	PDZ domain	PFAM	PF00595	PDZ	coord: 7..56 e-value: 8.9E-7 score: 29.1
IPR001478	PDZ domain	PROSITE	PS50106	PDZ	coord: 1..60 score: 10.375
IPR001478	PDZ domain	SUPERFAMILY	50156	PDZ domain-like	coord: 3..57
None	No IPR available	GENE3D	2.30.42.10		coord: 1..108 e-value: 1.5E-11 score: 44.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 287..313
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..254
None	No IPR available	CDD	cd00992	PDZ_signaling	coord: 5..56 e-value: 6.43535E-10 score: 53.7247

Blast

[Close]

BLAST of TCONS_00057094-protein vs. Swiss-Prot (Human)
Match: MAST4 (Microtubule-associated serine/threonine-protein kinase 4 OS=Homo sapiens GN=MAST4 PE=1 SV=3)

HSP 1 Score: 96.2857 bits (238), Expect = 6.362e-22
Identity = 94/310 (30.32%), Postives = 142/310 (45.81%), Query Frame = 0

Query:    1 MQHMVETVDTRGPAFEVGLKENDLITHVNNEAIQGYQHVDVVRLILRSGETVKLTVTDIERTSIRTGSKRKTVGNRVQSRKLRGRSRNSSVEDSGRSSAGGAISRKSAIYRKLRK---PSL---RRNSSLKRAKKSNLFIPGASFDARRAANAMEGGDQANASSATSPTGGGSTSPNSPNTHSS--------------------KNAFLHGMLPKLARTVGAHSRRRSISCIPVSPLAR---TPSIGAASVRSPSPLATKNGGT----------VMSP---TNNFTRPKSSTMTPGSPLLRRALSPDRLN 268
            + H+V  V+   PA + GLK  DLITH+N E + G  H +V+ L+L+SG  V +T T  E TSI+TG  R+   N  +SR +R   ++   E         ++ R+ ++++KL K   P L   R  S L R+  S   +PG+                 ++ S  SPT    ++P+ P+  +S                    + + LHG+ PKL        RR+S   IP+SPLAR         +  RSPSPL   + G           + SP     +  RPKS+   P SPLL+R  S ++L+
Sbjct: 1173 VHHIVWNVEEGSPACQAGLKAGDLITHINGEPVHGLVHTEVIELLLKSGNKVSITTTPFENTSIKTGPARR---NSYKSRMVRRSKKSKKKE---------SLERRRSLFKKLAKQPSPLLHTSRSFSCLNRSLSSGESLPGSP---------------THSLSPRSPTPSYRSTPDFPSGTNSSQSSSPSSSAPNSPAGSGHIRPSTLHGLAPKLGGQRYRSGRRKSAGNIPLSPLARTPSPTPQPTSPQRSPSPLLGHSLGNSKIAQAFPSKMHSPPTIVRHIVRPKSAE-PPRSPLLKRVQSEEKLS 1454

The following BLAST results are available for this feature:

BLAST of TCONS_00057094-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00057094-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MAST4	6.362e-22	30.32	Microtubule-associated serine/threonine-protein ki...	[more]

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TCONS_00057094-protein (polypeptide) - C. hemisphaerica