Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00057094-protein ID=TCONS_00057094-protein|Name=TCONS_00057094-protein|organism=Clytia hemisphaerica|type=polypeptide|length=313bp MQHMVETVDTRGPAFEVGLKENDLITHVNNEAIQGYQHVDVVRLILRSGE TVKLTVTDIERTSIRTGSKRKTVGNRVQSRKLRGRSRNSSVEDSGRSSAG GAISRKSAIYRKLRKPSLRRNSSLKRAKKSNLFIPGASFDARRAANAMEG GDQANASSATSPTGGGSTSPNSPNTHSSKNAFLHGMLPKLARTVGAHSRR RSISCIPVSPLARTPSIGAASVRSPSPLATKNGGTVMSPTNNFTRPKSST MTPGSPLLRRALSPDRLNAPVQFEDLVNSRDGTLLVPANETGVDRRLNRS QSMKENKRKKHRR Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR001478 PDZ
Vocabulary: Molecular Function
Term Definition
GO:0005515 protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
molecular_function
GO:0005515
protein binding
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
50 100 150 200 250 300 Expect = 8.9E-7 / Score = 29.1 Score = 10.375 Score = Expect = 1.5E-11 / Score = 44.0 Score = Score = Score = Score = Expect = 6.43535E-10 / Score = 53.7247 Sequence PF00595 PS50106 SSF50156 G3DSA:2.30.42.10 mobidb-lite mobidb-lite mobidb-lite mobidb-lite cd00992
IPR Term IPR Description Source Source Term Source Description Alignment
IPR001478 PDZ domain PFAM PF00595 PDZ coord: 7..56 e-value: 8.9E-7 score: 29.1
IPR001478 PDZ domain PROSITE PS50106 PDZ coord: 1..60 score: 10.375
IPR001478 PDZ domain SUPERFAMILY 50156 PDZ domain-like coord: 3..57
None No IPR available GENE3D 2.30.42.10 coord: 1..108 e-value: 1.5E-11 score: 44.0
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 147..180
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 67..126
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 287..313
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 217..254
None No IPR available CDD cd00992 PDZ_signaling coord: 5..56 e-value: 6.43535E-10 score: 53.7247
Blast
BLAST of TCONS_00057094-protein vs. Swiss-Prot (Human)
Match:
MAST4 (Microtubule-associated serine/threonine-protein kinase 4 OS=Homo sapiens GN=MAST4 PE=1 SV=3)
HSP 1 Score: 96.2857 bits (238), Expect = 6.362e-22
Identity = 94/310 (30.32%), Postives = 142/310 (45.81%), Query Frame = 0
Query: 1 MQHMVETVDTRGPAFEVGLKENDLITHVNNEAIQGYQHVDVVRLILRSGETVKLTVTDIERTSIRTGSKRKTVGNRVQSRKLRGRSRNSSVEDSGRSSAGGAISRKSAIYRKLRK---PSL---RRNSSLKRAKKSNLFIPGASFDARRAANAMEGGDQANASSATSPTGGGSTSPNSPNTHSS--------------------KNAFLHGMLPKLARTVGAHSRRRSISCIPVSPLAR---TPSIGAASVRSPSPLATKNGGT----------VMSP---TNNFTRPKSSTMTPGSPLLRRALSPDRLN 268
+ H+V V+ PA + GLK DLITH+N E + G H +V+ L+L+SG V +T T E TSI+TG R+ N +SR +R ++ E ++ R+ ++++KL K P L R S L R+ S +PG+ ++ S SPT ++P+ P+ +S + + LHG+ PKL RR+S IP+SPLAR + RSPSPL + G + SP + RPKS+ P SPLL+R S ++L+
Sbjct: 1173 VHHIVWNVEEGSPACQAGLKAGDLITHINGEPVHGLVHTEVIELLLKSGNKVSITTTPFENTSIKTGPARR---NSYKSRMVRRSKKSKKKE---------SLERRRSLFKKLAKQPSPLLHTSRSFSCLNRSLSSGESLPGSP---------------THSLSPRSPTPSYRSTPDFPSGTNSSQSSSPSSSAPNSPAGSGHIRPSTLHGLAPKLGGQRYRSGRRKSAGNIPLSPLARTPSPTPQPTSPQRSPSPLLGHSLGNSKIAQAFPSKMHSPPTIVRHIVRPKSAE-PPRSPLLKRVQSEEKLS 1454
The following BLAST results are available for this feature:
BLAST of TCONS_00057094-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M Q H M V E T V D T R G P A F E V G L K E N D L I T H V N N E A I Q G Y Q H V D V V R L I L R S G E T V K L T V T D I E R T S I R T G S K R K T V G N R V Q S R K L R G R S R N S S V E D S G R S S A G G A I S R K S A I Y R K L R K P S L R R N S S L K R A K K S N L F I P G A S F D A R R A A N A M E G G D Q A N A S S A T S P T G G G S T S P N S P N T H S S K N A F L H G M L P K L A R T V G A H S R R R S I S C I P V S P L A R T P S I G A A S V R S P S P L A T K N G G T V M S P T N N F T R P K S S T M T P G S P L L R R A L S P D R L N A P V Q F E D L V N S R D G T L L V P A N E T G V D R R L N R S Q S M K E N K R K K H R R 50 100 150 200 250 300 Expect = 6.36e-22 / Id = 30.32 Sequence MAST4
Match Name E-value Identity Description
MAST4 6.362e-22 30.32 Microtubule-associated serine/threonine-protein ki... [more]
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