TCONS_00057094-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057094-protein
Unique NameTCONS_00057094-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length313

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057094-protein ID=TCONS_00057094-protein|Name=TCONS_00057094-protein|organism=Clytia hemisphaerica|type=polypeptide|length=313bp
MQHMVETVDTRGPAFEVGLKENDLITHVNNEAIQGYQHVDVVRLILRSGE
TVKLTVTDIERTSIRTGSKRKTVGNRVQSRKLRGRSRNSSVEDSGRSSAG
GAISRKSAIYRKLRKPSLRRNSSLKRAKKSNLFIPGASFDARRAANAMEG
GDQANASSATSPTGGGSTSPNSPNTHSSKNAFLHGMLPKLARTVGAHSRR
RSISCIPVSPLARTPSIGAASVRSPSPLATKNGGTVMSPTNNFTRPKSST
MTPGSPLLRRALSPDRLNAPVQFEDLVNSRDGTLLVPANETGVDRRLNRS
QSMKENKRKKHRR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035965XLOC_035965Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057094TCONS_00057094Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300Score = 10.375Score = Expect = 1.5E-11 / Score = 44.0Score = Score = Score = Score = SequencePF00595PS50106SSF50156G3DSA:2.30.42.10mobidb-litemobidb-litemobidb-litemobidb-litecd00992
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001478PDZ domainPFAMPF00595PDZcoord: 7..56
e-value: 8.9E-7
score: 29.1
IPR001478PDZ domainPROSITEPS50106PDZcoord: 1..60
score: 10.375
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 3..57
NoneNo IPR availableGENE3D2.30.42.10coord: 1..108
e-value: 1.5E-11
score: 44.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..313
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..254
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 5..56
e-value: 6.43535E-10
score: 53.7247

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057094-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
MQHMVETVDTRGPAFEVGLKENDLITHVNNEAIQGYQHVDVVRLILRSGETVKLTVTDIERTSIRTGSKRKTVGNRVQSRKLRGRSRNSSVEDSGRSSAGGAISRKSAIYRKLRKPSLRRNSSLKRAKKSNLFIPGASFDARRAANAMEGGDQANASSATSPTGGGSTSPNSPNTHSSKNAFLHGMLPKLARTVGAHSRRRSISCIPVSPLARTPSIGAASVRSPSPLATKNGGTVMSPTNNFTRPKSSTMTPGSPLLRRALSPDRLNAPVQFEDLVNSRDGTLLVPANETGVDRRLNRSQSMKENKRKKHRR50100150200250300Expect = 6.36e-22 / Id = 30.32SequenceMAST4
Match NameE-valueIdentityDescription
MAST46.362e-2230.32Microtubule-associated serine/threonine-protein ki... [more]
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