TCONS_00057272-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057272-protein
Unique NameTCONS_00057272-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length547

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057272-protein ID=TCONS_00057272-protein|Name=TCONS_00057272-protein|organism=Clytia hemisphaerica|type=polypeptide|length=547bp
MKTVTFLLLLTSELTFHIEALTKPIPPSNPIKISSGNTVFNSRHILKKNQ
RAKLEFVSRTTGGSEGYRRVYDASANLLIPCSHFKTDGQIVKIHETSICQ
QPSQVMSFPYKWIAYVNRRHLRNNGHGCRSTSALIQRLFKSGAQAVILSS
SLIILNGGTKALQKSGPVVIVDGDVAERIDQVLKIQQKTFVRIKSQQRQP
SRQRDTESGNVETEEKNEYLDMGIFMSFFIIVSLVCLAMLIKIKWKQTYL
RNTRTKIAVEALQTMQIRHYDVTARLRNDDVNSETFNNCAVCLDVLENGK
DIRILPCHHEFHVTCIDKWLISNYTCPLCMHSIIGTHKSKSKHRSRNPFC
NLHFDKFRNNLSTTTRNPQQPEQEEEEEIRNTLENTQHIEDNSWNVHRQT
DQQSRHSSKTTTLVQHYSNHNVTGLQDSKTTREQRVPLLLNCGDTEHACA
VKRQHHYGHYRCPFHKKHSTDVSYKQHKKQENKNQSSNNLQTNADACEFL
SKSCHDIEDDDGPQNTRFLDHKQRRHSFPIETVVFIENEQNLQASNL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036077XLOC_036077Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057272TCONS_00057272Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300350400450500Expect = 4.3E-9 / Score = 35.8Score = Expect = 7.4E-17 / Score = 60.6SequenceCoilG3DSA:3.50.30.30mobidb-litemobidb-litemobidb-liteSSF57850SM00184PF13639PS50089cd00162G3DSA:3.30.40.10
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 372..392
NoneNo IPR availableGENE3D3.50.30.30coord: 45..189
e-value: 4.3E-9
score: 35.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..380
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 471..490
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 397..431
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 288..334
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 289..329
e-value: 1.5E-8
score: 44.4
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 288..329
e-value: 5.6E-12
score: 45.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 289..329
score: 12.519
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 289..333
e-value: 1.86097E-10
score: 55.9148
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 190..360
e-value: 7.4E-17
score: 60.6

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057272-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
50100150200250300350400450500Expect = 6.79e-39 / Id = 32.32SequenceZNRF3
Match NameE-valueIdentityDescription
ZNRF36.786e-3932.32E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens ... [more]
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