TCONS_00057319-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00057319-protein
Unique Name	TCONS_00057319-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1490

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00057319-protein ID=TCONS_00057319-protein|Name=TCONS_00057319-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1490bp
MIPMDNENAFFENKVKEIINQELVKAKFDDLCKTISTKIIERVHKIDDDH
QEINQQYDELGEMIEGLLANNPELKDVVSKSKDSVIVIDDDEEDDNLKEN
TKTNYKNGETTNCKNTLVKEISKSISLSISKETNTTAKSYSTVLNSSRKL
EDVISKLTSRVKNSSSITDRVSTDDSQPDETTDQSSQEECDDPITISESN
ELPSIVTTTTLTSQSINSILNSPSKIDNETSVENEGSEIEIGKTKNIDLP
ASLLQTLQKVEDSGTNEPIVVQESPVKTNSSVNEQPTKTFTENRNLLIKS
KKEKNSGTLSDNDKTNLLTYTLETNTNKRDKIVSLNIVSSSKDQYNLKVE
PSVTPGRSSPRSPRTKSVKNKLELSIDTDTFIPTIPLPPRRHEFAFEYEK
LVFAKPGKSDIWYQAKLMKELGAKGPSAKYSIQFISGQKLRQKVDSKSIA
TRQHCHPSDVVLGTRIVAGRPSDTVNSTVQKKYKDITTTTSYTVMFAGTI
AELACEANRYRYLVFFDDGYAQYLPLNRIFPVVHSSKNVWEDVSPDCQEF
IKEYLQEYPMRPLVVTQLGYEMQTEWNGEWWQSKVVSIDSSLVKILFDVD
KRSEWIYRGTTRLEPLYNHFINPPAPESKASKGKKGRKKGAKETLVSYVD
EKITDPQHGVCNHSLTDPRGEKQFAEWGEPRDFTDKILARCYNEEGVSLS
LTSPRVSSPPPAPPVDHKMLKIVTQSTEGAQNATRGHLKLKLKRSSSNDL
FKASKSSSPSNSPRCRKKLKAESPDDYADNNLPFDGQMQLSPSPEKSKEE
ISQEELLGALSALNTSPNVLSPKTKGESSATPETTKATPRGGRSPRRSST
KPSPQTPNFPKPTRHTCNENCITDRRNILDYHRFGFTNYLSIPFHLGWKR
ESAKKSSSYHRDIYYRTPCNKRVRNLAEITKYLLMTNCTNVCIDMFCFYS
KISCRSQPVKAKTPKVKIDDLSDGRETCPVVLINDINEDLPPHLAYISSR
NKAEDVYINIDPGFLVCCDCTDFCQDKSKCRCAQLTVESSNAIDGVVDPN
AGYHYRRLKECITTGIYECNSNCSCKKSCYNRVVQNGIQLRLQVFMTENR
GWGLRCMDDVAKGTFICTYAGQVLNEQTANREGMDYGDEYLAELDHIEVV
ERAKDGYESDVPELKEKSFEDSDNESSIYTESESSDSVINISSDSDGDSS
DERDGEVGTIEPLPKKLRSATSIDAQTSTAKIKDTSKDEKQSQSADTAIN
KKTTEKNKGEDPKSSEFQNDKTKTSDSSETRTSKTTVDEPMEQTNKKSEN
PTTADKKSETLESGKPEAMASSATAPAALPQGKKARLAKKSTGQFACKGT
NNGIIIGQKKTKDKEKDGKEPETGETKTSNDTNDTSTVKKDKVIPTRSLF
NKDDQMYVIDAKSFGNVGRFMNHSCSPNLFVQNVMVDTHDLRFPWVAFFA
GQNIPAYTELTWDYSYEIGSVSGKELYCKCGSKDCKGRLL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_036121	XLOC_036121	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00057319	TCONS_00057319	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001214	SET_dom
IPR001739	Methyl_CpG_DNA-bd
IPR007728	Pre-SET_dom
IPR003616	Post-SET_dom
IPR016177	DNA-bd_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0003677	DNA binding
GO:0018024	histone-lysine N-methyltransferase activity
GO:0008270	zinc ion binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0034968	histone lysine methylation

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034968	histone lysine methylation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0018024	histone-lysine N-methyltransferase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1147..1167
None	No IPR available	COILS	Coil	Coil	coord: 50..70
None	No IPR available	GENE3D	3.30.890.10		coord: 891..952 e-value: 2.7E-10 score: 39.7
None	No IPR available	GENE3D	2.170.270.10		coord: 955..1490 e-value: 2.8E-69 score: 233.1
None	No IPR available	GENE3D	2.30.30.140		coord: 462..529 e-value: 4.5E-7 score: 29.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 348..370
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1357..1390
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 744..867
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1156..1337
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..203
None	No IPR available	CDD	cd00122	MBD	coord: 890..948 e-value: 8.97079E-12 score: 61.9565
None	No IPR available	SUPERFAMILY	82199	SET domain	coord: 1403..1480 coord: 962..1148
IPR001214	SET domain	SMART	SM00317	set_7	coord: 1090..1471 e-value: 9.6E-38 score: 141.4
IPR001214	SET domain	PFAM	PF00856	SET	coord: 1101..1464 e-value: 2.7E-22 score: 79.8
IPR001214	SET domain	PROSITE	PS50280	SET	coord: 1090..1465 score: 17.134
IPR001739	Methyl-CpG DNA binding	SMART	SM00391	TAM_2	coord: 887..960 e-value: 1.0E-6 score: 38.3
IPR001739	Methyl-CpG DNA binding	PFAM	PF01429	MBD	coord: 894..953 e-value: 1.1E-6 score: 28.2
IPR001739	Methyl-CpG DNA binding	PROSITE	PS50982	MBD	coord: 884..953 score: 11.394
IPR007728	Pre-SET domain	SMART	SM00468	preset_2	coord: 968..1074 e-value: 5.9E-15 score: 65.7
IPR007728	Pre-SET domain	PFAM	PF05033	Pre-SET	coord: 972..1082 e-value: 1.1E-12 score: 48.5
IPR007728	Pre-SET domain	PROSITE	PS50867	PRE_SET	coord: 1016..1087 score: 10.338
IPR003616	Post-SET domain	PROSITE	PS50868	POST_SET	coord: 1474..1490 score: 8.79
IPR016177	DNA-binding domain	SUPERFAMILY	54171	DNA-binding domain	coord: 891..974

Blast

[Close]

BLAST of TCONS_00057319-protein vs. Swiss-Prot (Human)
Match: SETB1 (Histone-lysine N-methyltransferase SETDB1 OS=Homo sapiens GN=SETDB1 PE=1 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 3.666e-79
Identity = 147/375 (39.20%), Postives = 217/375 (57.87%), Query Frame = 0

Query:  853 SPQTPNFPKPTR------HTCNENCITDRRNILDYHRFGFTNYLSIPFHLGWKRESAKK----SSSYHRDIYYRTPCNKRVRNLAEITKYLLMTNCTNVCIDMFCF--YSKISCRSQPVKAKTPKVKIDDLSDGRETCPVVLINDINEDLPPHLAYISSRNKAEDVYINIDPGFLVCCDCTDFCQDKSKCRCAQLTVESSNAI-DGVVDPNAGYHYRRLKECITTGIYECNSNCSCKKS-CYNRVVQNGIQLRLQVFMTENRGWGLRCMDDVAKGTFICTYAGQVLNEQTANREGMDYGDEYLAELDHIEVVERAKDGYESDVPELKEKSFEDSDNESSIYTESESSDSVINISSDSDG-DSSDERDGEVGTIEP 1212
            +P  P++  P        H C+  C++  R + +    G  N L +P    ++R +A++       +H  + Y+TPC   +R + EI +YL  T C  + ++MFC   Y  +  + QP K   P   I D++ G+E  P+  +N+I+   PP +AY   R   + V+IN  P FLV CDC D C+DKSKC C QLT++++     G ++PN+GY Y+RL+EC+ TG+YECN  C C  + C NR+VQ+G+Q+RLQ+F T+N+GWG+RC+DD+AKG+F+C YAG++L +  A++EG++ GDEY A LDHIE VE  K+GYESD P                             SSDS G D  D+ DG  GT +P
Sbjct:  558 APAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRNEQYRG-KNPLLVPLLYDFRRMTARRRVNRKMGFH--VIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLDPYVLVDRKFQPYK---PFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGVYECNKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAP----------------------------CSSDSSGVDLKDQEDGNSGTEDP 898

HSP 2 Score: 160.999 bits (406), Expect = 1.329e-39
Identity = 79/212 (37.26%), Postives = 123/212 (58.02%), Query Frame = 0

Query:  408 KSDIWYQAKLMKELGAKGPSAKYSIQFISGQKLRQKVDSKSIATRQHCHPSDVVLGTRIVAGRPSDTVNSTVQKKYKDITTTTSYTVMFAGTIAELACEANRYRYLVFFDDGYAQYLPLNRIFPVVHSSKNVWEDVSP-DCQEFIKEYLQEYPMRPLVVTQLGYEMQTEWNGEWWQSKVVSIDSSLVKILFDVDKRSEWIYRGTTRLEPLYN 618
            ++  W++  L+  +   GP  KY ++F    K +  +    IA   H     + +G+R+VA             KYKD     +   ++AG +AE     N+ R+L+FFDDGYA Y+  + ++P+    K  WED+    C++FI+EY+  YP RP+V+ + G  ++TEW G WW+S+V  +D SLV+ILF  DKR EWIYRG+TRLEP+++
Sbjct:  209 RTKTWHKGTLIA-IQTVGPGKKYKVKF--DNKGKSLLSGNHIAYDYHPPADKLYVGSRVVA-------------KYKD----GNQVWLYAGIVAETPNVKNKLRFLIFFDDGYASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYVTAYPNRPMVLLKSGQLIKTEWEGTWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFS 400

HSP 3 Score: 160.229 bits (404), Expect = 1.984e-39
Identity = 83/157 (52.87%), Postives = 105/157 (66.88%), Query Frame = 0

Query: 1334 KARLAKKSTGQFACKGTNNGIIIGQKKTKDKEKDGKEPETGETKTSNDTNDTSTVKKDKVIPTRSLFNKDDQMYVIDAKSFGNVGRFMNHSCSPNLFVQNVMVDTHDLRFPWVAFFAGQNIPAYTELTWDYSYEIGSVSGKELYCKCGSKDCKGRLL 1490
            K ++A KST  FA K T+ GI I  K T                 S D  +++ V+K+    TR  ++ ++  Y+IDAK  GN+GR++NHSCSPNLFVQNV VDTHDLRFPWVAFFA + I A TELTWDY+YE+GSV GKEL C CG+ +C+GRLL
Sbjct: 1156 KRQVAVKSTRGFALKSTH-GIAI--KST--------------NMASVDKGESAPVRKN----TRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL 1291

The following BLAST results are available for this feature:

BLAST of TCONS_00057319-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00057319-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SETB1	3.666e-79	39.20	Histone-lysine N-methyltransferase SETDB1 OS=Homo ...	[more]

You are here

TCONS_00057319-protein (polypeptide) - C. hemisphaerica