TCONS_00057349-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057349-protein
Unique NameTCONS_00057349-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length333

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057349-protein ID=TCONS_00057349-protein|Name=TCONS_00057349-protein|organism=Clytia hemisphaerica|type=polypeptide|length=333bp
MQDKMLRVAVIEGGYSKEKDISVKSAQGVFENLDLSKYLPTRVYIDDVEW
TAYDADGRYPINKNDFSFIHKDNIKITFDVAFILVHGTPGEDGKLQGYFD
MIGIPYTTSSAVVTTLAFHKFYVKQFIRSLNLANVAEAVLVKRGETVNDD
EVLMKIGLPCFVKPTDGGSSYGVTKVKEKTQLQEAISLAFKHGSQVMIES
FVGGREITNGVYRKADKQIKVLPITEIITDNEFFDYEAKYEGKVDEVTPA
DLDDKMTMKIKTLTQRIYDALGMRGVVRIDYIINDVNNEPHLIEINNVPG
QSAPSSIIPQMARCEQISLHELYGDLIQASLNP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036140XLOC_036140Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057349TCONS_00057349Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005905D_ala_D_ala
IPR011127Dala_Dala_lig_N
IPR011095Dala_Dala_lig_C
IPR013815ATP_grasp_subdomain_1
IPR000291D-Ala_lig_Van_CS
IPR011761ATP-grasp
IPR016185PreATP-grasp_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0008716D-alanine-D-alanine ligase activity
GO:0003824catalytic activity
GO:0005524ATP binding
GO:0046872metal ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005524 ATP binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0008716 D-alanine-D-alanine ligase activity
molecular_function GO:0046872 metal ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.20coord: 1..129
e-value: 3.5E-28
score: 97.2
NoneNo IPR availableGENE3D3.30.470.20coord: 192..333
e-value: 2.6E-32
score: 111.4
NoneNo IPR availableSUPERFAMILY56059Glutathione synthetase ATP-binding domain-likecoord: 120..324
IPR005905D-alanine--D-alanine ligaseTIGRFAMTIGR01205TIGR01205coord: 7..329
e-value: 4.1E-76
score: 253.9
IPR005905D-alanine--D-alanine ligasePIRSFPIRSF039102Ddl/VanBcoord: 3..333
e-value: 2.3E-82
score: 274.8
IPR005905D-alanine--D-alanine ligaseHAMAPMF_00047Dala_Dala_ligcoord: 6..331
score: 30.257
IPR011127D-alanine--D-alanine ligase, N-terminal domainPFAMPF01820Dala_Dala_lig_Ncoord: 7..109
e-value: 4.6E-23
score: 81.5
IPR011095D-alanine--D-alanine ligase, C-terminalPFAMPF07478Dala_Dala_lig_Ccoord: 138..328
e-value: 2.0E-44
score: 151.5
IPR013815ATP-grasp fold, subdomain 1GENE3D3.30.1490.20coord: 135..191
e-value: 3.6E-16
score: 58.3
IPR000291D-alanine--D-alanine ligase/VANA/B/C, conserved sitePROSITEPS00843DALA_DALA_LIGASE_1coord: 86..97
IPR011761ATP-grasp foldPROSITEPS50975ATP_GRASPcoord: 124..328
score: 45.802
IPR016185Pre-ATP-grasp domainSUPERFAMILY52440PreATP-grasp domaincoord: 6..118

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057349-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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