TCONS_00057411-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057411-protein
Unique NameTCONS_00057411-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length121

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057411-protein ID=TCONS_00057411-protein|Name=TCONS_00057411-protein|organism=Clytia hemisphaerica|type=polypeptide|length=121bp
MPHVLDPTVEIEQEDQIYRVERILKSRKRSGITSYLVKRQGYPLSQATWE
PSENILDPNLIVDFNRRTEQKNANKAKAKEKKGENKTTRKESLNMIVVKE
PENENHSNFSISNSIIMVLVL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036170XLOC_036170Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057411TCONS_00057411Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000953Chromo/chromo_shadow_dom
IPR023780Chromo_domain
IPR016197Chromodomain-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000953Chromo/chromo shadow domainSMARTSM00298chromo_7coord: 17..69
e-value: 1.7E-9
score: 47.6
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 18..76
score: 14.947
NoneNo IPR availableGENE3D2.40.50.40coord: 6..90
e-value: 6.0E-17
score: 60.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..93
NoneNo IPR availableCDDcd00024CHROMOcoord: 18..67
e-value: 3.41204E-10
score: 50.7255
IPR023780Chromo domainPFAMPF00385Chromocoord: 18..67
e-value: 1.3E-11
score: 44.1
IPR016197Chromo domain-likeSUPERFAMILY54160Chromo domain-likecoord: 8..71

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057411-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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