TCONS_00058421-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058421-protein
Unique NameTCONS_00058421-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length169

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058421-protein ID=TCONS_00058421-protein|Name=TCONS_00058421-protein|organism=Clytia hemisphaerica|type=polypeptide|length=169bp
MGSTESNCQHYQRKCFMVSPCCNKEYGCRICHDENEGHTLNRREVEQIVC
LQCKTKQKVQRNCEECGILFGRYTCLTCRLFDDVDKKQFHCEGCGICRVG
GSENFYHCDICNMCIGIGIKDSHKCLADSSKQNCPVCLEYLHTSRKVLHI
PQCSHVLHYECYRSMLQHG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036809XLOC_036809Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058421TCONS_00058421Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008913Znf_CHY
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017921Znf_CTCHY
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008913Zinc finger, CHY-typePFAMPF05495zf-CHYcoord: 8..80
e-value: 8.0E-18
score: 64.6
IPR008913Zinc finger, CHY-typePROSITEPS51266ZF_CHYcoord: 1..68
score: 21.119
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 133..168
e-value: 2.8E-6
score: 27.5
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 127..169
e-value: 6.0E-9
score: 34.8
IPR017921Zinc finger, CTCHY-typePROSITEPS51270ZF_CTCHYcoord: 70..133
score: 28.107
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 132..168
NoneNo IPR availableSUPERFAMILY161245Zinc hairpin stackcoord: 71..126
NoneNo IPR availableSUPERFAMILY161219CHY zinc finger-likecoord: 4..70

Blast
[Close]
BLAST of TCONS_00058421-protein vs. Swiss-Prot (Human)
Match: ZN363 (RING finger and CHY zinc finger domain-containing protein 1 OS=Homo sapiens GN=RCHY1 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.291e-59
Identity = 84/165 (50.91%), Postives = 115/165 (69.70%), Query Frame = 0 
Query:    5 ESNCQHYQRKCFMVSPCCNKEYGCRICHDENEGHTLNRREVEQIVCLQCKTKQKVQRNCEECGILFGRYTCLTCRLFDDVDKKQFHCEGCGICRVGGSENFYHCDICNMCIGIGIKDSHKCLADSSKQNCPVCLEYLHTSRKVLHIPQCSHVLHYECYRSMLQHG 169
            +  C+HY R C + +PCC+K Y CR+CHD NE H L+R +V+++ C+ C+  Q  Q+ CEEC  LFG Y C  C LFD  DKKQ+HCE CGICR+G  E+F+HC  CN+C+ + ++  HKC+ + S+QNCP+CLE +HTSR V H+  C H+LH  CY  ML+ G
Sbjct:   17 QRGCEHYDRGCLLKAPCCDKLYTCRLCHDNNEDHQLDRFKVKEVQCINCEKIQHAQQTCEECSTLFGEYYCDICHLFDK-DKKQYHCENCGICRIGPKEDFFHCLKCNLCLAMNLQGRHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG 180
The following BLAST results are available for this feature:
BLAST of TCONS_00058421-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN3632.291e-5950.91RING finger and CHY zinc finger domain-containing ... [more]
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