TCONS_00062353-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062353-protein
Unique NameTCONS_00062353-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length259

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062353-protein ID=TCONS_00062353-protein|Name=TCONS_00062353-protein|organism=Clytia hemisphaerica|type=polypeptide|length=259bp
MPRSRSNSRSRSRSTSPKKRKSKDRERERDRDRDRDRHKRSSHRHRSRSP
ARSKRRSRSRSPSVDRFGRSTKRRDKFADEDDDTRVEPGMKNEEMERQRK
IRATEMQAKFIEEETQRRIEDVVMKRVEEELAKRKIDVDEEVMRKVEEAK
KHVEHHLEGEYERRTKEIAEQFKLKEEQLKQEIERLKKEIDLAYLKVQDT
EKKLAEERLTMLEKQRGLEDEKRQIEADFKKNERKAQEVILNKKNSRPKL
SFGLKSLPK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039069XLOC_039069Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062353TCONS_00062353Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033371ARGLU1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 169..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..98
IPR033371Arginine and glutamate-rich protein 1PFAMPF15346ARGLUcoord: 105..254
e-value: 1.1E-34
score: 119.4

Blast
[Close]
BLAST of TCONS_00062353-protein vs. Swiss-Prot (Human)
Match: ARGL1 (Arginine and glutamate-rich protein 1 OS=Homo sapiens GN=ARGLU1 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.680e-23
Identity = 87/204 (42.65%), Postives = 134/204 (65.69%), Query Frame = 0 
Query:   56 RSRSRSPS--VDRFGRSTKRRDKFADEDDDTRVEPGMKNEEMERQRKIRATEMQAKFIEEETQRRIEDVVMKRVEEELAKRKIDVDEEVMRKVEEAKKHVEHHLEGEYER-RTKEIAEQFKLKEEQLKQEIERLKKEIDLAYLKVQDTEKKLAEERLTMLEKQRGLEDEKRQIEADFKKNERKAQEVILNKKNSRPKLSFGLKS 256
            R R+ SP   +D FGR+  +R      D+  + E   K  E ERQRKIR  E++ K IEEET RR+E++V KRVEEEL KRK +++ EV+R+VEEAK+ +E  L  E ER R  E+A Q   +EE+  +  E L++ ++    K+ + + KLAEE+L ++E+QR + +E+ ++E + ++ +++ Q++IL K  SRPKLSF LK+
Sbjct:   72 RERASSPPDRIDIFGRTVSKRSSL---DEKQKREEEEKKAEFERQRKIRQQEIEEKLIEEETARRVEELVAKRVEEELEKRKDEIEREVLRRVEEAKRIMEKQLLEELERQRQAELAAQKAREEEERAKR-EELERILEENNRKIAEAQAKLAEEQLRIVEEQRKIHEERMKLEQERQRQQKEEQKIILGKGKSRPKLSFSLKT 271
The following BLAST results are available for this feature:
BLAST of TCONS_00062353-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARGL17.680e-2342.65Arginine and glutamate-rich protein 1 OS=Homo sapi... [more]
back to top