TCONS_00065053-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065053-protein
Unique NameTCONS_00065053-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length110

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065053-protein ID=TCONS_00065053-protein|Name=TCONS_00065053-protein|organism=Clytia hemisphaerica|type=polypeptide|length=110bp
MNFCCFTCQERAGRYCGSLRVLNSYWIAQDSTFKYFEVIMVDPQHKAIRR
DPRINWIVKSVHKHRELRGLTSAGRKNRGIAKGHGYNKVKSSSRRATWKK
HNLVSLRRYR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040784XLOC_040784Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065053TCONS_00065053Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000439Ribosomal_L15e
IPR024794Rbsml_L15e_core_dom
IPR012678Ribosomal_L23/L15e_core_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000439Ribosomal protein L15eSMARTSM01384Ribosomal_L15e_2coord: 1..99
e-value: 1.4E-20
score: 84.3
IPR000439Ribosomal protein L15ePFAMPF00827Ribosomal_L15ecoord: 9..96
e-value: 2.4E-41
score: 141.5
IPR024794Ribosomal protein L15e core domainGENE3D3.40.1120.10coord: 4..99
e-value: 6.0E-48
score: 162.5
IPR012678Ribosomal protein L23/L15e core domainSUPERFAMILY54189Ribosomal proteins S24e, L23 and L15ecoord: 7..100

Blast
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BLAST of TCONS_00065053-protein vs. Swiss-Prot (Human)
Match: RL15 (60S ribosomal protein L15 OS=Homo sapiens GN=RPL15 PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 1.018e-46
Identity = 65/104 (62.50%), Postives = 83/104 (79.81%), Query Frame = 0 
Query:    7 TCQERAGRYCGSLRVLNSYWIAQDSTFKYFEVIMVDPQHKAIRRDPRINWIVKSVHKHRELRGLTSAGRKNRGIAKGHGYNKVKSSSRRATWKKHNLVSLRRYR 110
              +ERAGR+CG+LRVLNSYW+ +DST+K+FEVI++DP HKAIRR+P   WI K VHKHRE+RGLTSAGRK+RG+ KGH ++     SRRA W++ N + L RYR
Sbjct:  101 VAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204
The following BLAST results are available for this feature:
BLAST of TCONS_00065053-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RL151.018e-4662.5060S ribosomal protein L15 OS=Homo sapiens GN=RPL15... [more]
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