TCONS_00048919 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00048919
Unique Name	TCONS_00048919
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3726

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_148:159874..169674-
coding sequence from alignment at scaffold_148:159874..169674-

transcript sequence

>TCONS_00048919 ID=TCONS_00048919|Name=TCONS_00048919|organism=Clytia hemisphaerica|type=transcript|length=3726bp
AATGAGAAAAACACGATCCGAATGAAAGCAAAAATCCATAAAACACTCTG
AGAGCTATTCGGTCAAACGATCAAGCAAATAAAAACTGATATATTTTGGC
TTaggaaaaaaagaacatgtcAGATATTCTTGGTTTATTGTAAttgaatt
ttgttgtttgttgtttgcgAGGAAATATGAAGtggtttttcttccttttt
gggGTATGGAATTNTTGTTTGCGAGGAAATATGAAGCGGTTTTTCCTCCT
TTTTGGGGTATGGAATTTAGTGGTGATTTCACAGCCAAAATCTATGAACC
TGACCAGTTCCTGCGAATTTGCTAAGAAAACTTATCGAGATGCAGGATAC
AAAGACGAGGATATTTTCACAACCGAGCAAGAAGGAAGCCTTCTGGAATG
CGGCTTGAAGAGAACTTGCTGCATGAAGAAAGCAGAGGAAAACTTGTTAT
CTTCAAGTGAAAAAGCCCGCATTGGCTTGTCTAACCCACTTCACAAATTG
AAAGATATGTTTCAAGGGAAAAGAGTGGAGTTTAAAGACAACTATCAAAT
TATGATGAACGTGTCACAGAGTAACCTCCATTCCATGTTCGAAAACACGT
ACAAATCACACTACACGAACAATGCTTATATTATCGATGATTTATACAAA
TCCCTTCGACAATACATTAATGGTGGAGAACTTGACTTGAGAGTGAAATT
CAACACTTTCTTCGGAAATCTCCACGAAAAAGTTTACGTCATGGTTAACC
CTGGCAAAACTTTCGATGCAAAATACAGAAATTGTATCCGAGACAACACG
AACTCTGTCAAACCTTTTGGCGACAAACAAAACACAATTTCCACACAAAT
GACCCGAGCTTTTGAAGCGTCGAGGGTATTTTTACAAGGCCTCAAAGAAG
GCATGGACGTTAGTTTGAAATTACTGGATTCACCAGTTCATGAAAAGTGT
AAATTAGCTTtcatgaaaatgtcaaaatgctCGATATGTTATGGACTCAA
TCCTAACGGGAAACCCTGCGCCAATTATTGTTTGAATGTAATGAAAGGCT
GTTACGCTTACACTATGATGTTTCAACCGCGATGGAATACTTATATTCAC
GCTATGACGGAGCTAGTCGCTAAATTAAAAGGTCCCTTTAATATGGAAGT
ATTCGTTGTACCATTGGGCGTTCAGATTTCTGGAGCTATCATGACCTTCC
AAGAGAATATTCAGAATGTCACACGCAAGgTTGAAGCTGTGTGTGGCCAA
CCAGCCGCAAACAAGAACTTCCTGAATGGCGATGCAAATTCGAGAAGTCG
CCGTGACACAGCAGCGGCCGACCAAGCCAAGAAGTCATTAGACCGGTTGA
AAGTCTCTTCGGAACAAGTGGTTAGCTCTGGCACCGATTTCCAGAAACAG
ACACAGGCCATAATTGATAGTTTGAAAAACGACCGCTTCATCCCAAGGTT
CATGATGGGAAAAGAGGAAGATATCAAGGCCACAGCTTATGAAAAACTTC
TCGCAGAAACGAAGAAAAAGTTGAGGGATTTGGAGGATTATTGGTATCTT
TTACCAAATCAAATATGTTCGGCTGGAATTGCTTCACAAAATAACACTAA
TTGTTGGAACGGCCAAAACACTAATGGTTACACGAAACCAGTGGTAAAAG
GAAATCTCAAAGACCTTTTCAACTCTAACCCAGAAATGGATTTGACATCA
AAATCTAAAGAGTACGATAGTGGCGTGTTGACACTGGATGCCAAACTTCA
AGACATTATCAAACAAATCGATTCGGTGATGGGAGGCAACGGTATCGTGC
AGCCAGATACTGAAGCCTCAGGTTCTGGCAGCGGTGACGACAGTTCTGGC
GATAATGACAATGAAGGGAGTGGTGAACGACCTGCCACTACTGAGGAACC
AGAGGAAGGTTCTGCGACAGGCAGCGGTGACGGGAAGAATGGTGGTGGTG
AGAATAAGACGAAGCCTCCAGTTCGCGTCACTACTGAATCCAACAGCGTG
GTCACGGATGCACCTACCATCCCTACGTGTCATCCCAATGATGCTAACTG
CTTACCCGACGAAAATAATATTGGGCCAAACGGCGTTAACGCTGCTGCTC
CACCCGAAATTCCACCATGGCAATCTCGTAATAAACAAACTCAAGAAAAC
CCTAGTAATGCCAGTACCACCTTAACAACGAACTTTTCTTTCATATCTAC
ACTGGTCGTATTAATAGTTTACTGGATCTGGTAATAAGTTTAACATGATT
ATATTTGCTGCACTCTCGACGGTGTTGCTCGAGGTATAATACTTTTAAAA
GAAGGTTGATATGAGTGCCCAATCGAAGGGAATGCTCCTCGTGTTTGTAT
TTTGTTATGACGCGTGTATGCCGAACAATGGATATGTTACGGTATTGGTC
AGAAATAAATATGTTAATATTAATCCATGAATGGAAGACTTTTCTTTGGG
ATAAATCTTCCTTACTAAGTTAAGAAAAATGAAcgtttttattattatat
taatatGAAGTTCTTATTAGCCCCAAATATCTAGATTTTAAGAGTACAGT
AACTTCATTCTCCATTCATTAAACCTCTAAATTGTAAATAACAAGAAATc
accaatttcaaaaatattttaggtcGATCGCCAAAACTTTTCCAAGTTCG
GCATTTTGTTACCTTACTGACTATTTCTCAAGCGATAGGTAAAATACTAT
TTAACGGTGTTGATGTGAAATTCAATGGATTTGATTTTGCATCGTGAACA
CAATAAACATGTCATTTTTGTATATAGgtgaaaattttttatatattatt
gATCATGATGTTCTTGGCTTTCGCTGTTCATAGCCATCAACCTCAAAGAT
TTGTTTCGATTATAAAGTACTGGTTGAAGAGGCTGTTTTCTTTTGTCGCA
GTTTGCAGGAACCTTCTATGGCTGTTTTGTTTCCAAAACTATCAAAAACC
CTATCAGGTGGTGCAGCGATACAAGGTTCGTGCAAACACACTGTCTCTTT
TGTTCTATAGTGTTccttattatattattattattttttgttacttACTT
TATATTCTTTGTTactaatttgaaataattttataaaatcgTTTTTATTT
ATCTAAGTACATGAATGAATGTCTAACAAATTGTAAAATGTGGACAGTTT
TTGGTATTCTGAAAGCTGTGCCAAAAGTCCATCTTCTCTCCGTTAAGtgt
aacttttcttttttattgtgaaagtttgttttatttttattgattgtttt
tacgcataaaaatgtaaaacatTTTATAATATGCGTCGCACTGCCTCTTG
AATATCAAGCCATTTGTATCTTTTTTCGCGAACTTCCAGTCATTGTCGTT
CGCTCAAATTCTTGTCATATTCGAAAAAAGTGCTTACAGTTACAACTCAA
TACGAAGTTTGAATGGTGTTTTCTGCTTATCTATGTTTGAGGTTTTTAGC
TTGATTTGATGAAGATGTTTGAGAAATGTCAGTGGAAAATGGAAAAGTTT
CAGCGTGAGCGAGCAAtgcttatattttttatatcatGTTATTGTGAACA
CtatacttttttaaataaataaaaactaaGTGATATCTACTCCCGAATTG
TCGTGGATTTGACTTTTCTTACCTTACACATAACTAGGTTTAAATTAAAT
TACTTTCATAATTTAACGCGTACCTTGGACGGAGCTGTTTTATTTAAATA
TCGTAATTCATTTACTCCAATAATTA

Run BLAST on NCBI

protein sequence of TCONS_00048919-protein

>TCONS_00048919-protein ID=TCONS_00048919-protein|Name=TCONS_00048919-protein|organism=Clytia hemisphaerica|type=polypeptide|length=685bp
MKWFFFLFGVWNXCLRGNMKRFFLLFGVWNLVVISQPKSMNLTSSCEFAK
KTYRDAGYKDEDIFTTEQEGSLLECGLKRTCCMKKAEENLLSSSEKARIG
LSNPLHKLKDMFQGKRVEFKDNYQIMMNVSQSNLHSMFENTYKSHYTNNA
YIIDDLYKSLRQYINGGELDLRVKFNTFFGNLHEKVYVMVNPGKTFDAKY
RNCIRDNTNSVKPFGDKQNTISTQMTRAFEASRVFLQGLKEGMDVSLKLL
DSPVHEKCKLAFMKMSKCSICYGLNPNGKPCANYCLNVMKGCYAYTMMFQ
PRWNTYIHAMTELVAKLKGPFNMEVFVVPLGVQISGAIMTFQENIQNVTR
KVEAVCGQPAANKNFLNGDANSRSRRDTAAADQAKKSLDRLKVSSEQVVS
SGTDFQKQTQAIIDSLKNDRFIPRFMMGKEEDIKATAYEKLLAETKKKLR
DLEDYWYLLPNQICSAGIASQNNTNCWNGQNTNGYTKPVVKGNLKDLFNS
NPEMDLTSKSKEYDSGVLTLDAKLQDIIKQIDSVMGGNGIVQPDTEASGS
GSGDDSSGDNDNEGSGERPATTEEPEEGSATGSGDGKNGGGENKTKPPVR
VTTESNSVVTDAPTIPTCHPNDANCLPDENNIGPNGVNAAAPPEIPPWQS
RNKQTQENPSNASTTLTTNFSFISTLVVLIVYWIW

Run BLAST on NCBI

transcript from alignment at scaffold_148:159874..169674-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00048919 ID=TCONS_00048919|Name=TCONS_00048919|organism=Clytia hemisphaerica|type=transcript|length=9801bp|location=Sequence derived from alignment at scaffold_148:159874..169674- (Clytia hemisphaerica)
AATGAGAAAAACACGATCCGAATGAAAGCAAAAATCCATAAAACACTCTG
AGAGCTATTCGGTCAAACGATCAAGCAAATAAAAACTGATATATTTTGGC
TTAGGAAAAAAAGAACATGTCAGATATTCTTGGTTTATTGTAATTGAATT
TTGTTGTTTGTTGTTTGCGAGGAAATATGAAGTGGTTTTTCTTCCTTTTT
GGGGTATGGAATTNTTGTTTGCGAGGAAATATGAAGCGGTTTTTCCTCCT
TTTTGGGGTATGGAATTTAGTGGTGATTTCACAGCCAAAATCTATGAACC
TGACCAGTTCCTGCGAATTTGCTAAGAAAACTTATCGAGATGCAGGATAC
AAAGACGAGGATATTTTCACAACCGAGCAAGAAGGTATCAATTAGCTACA
ACTTTTTCTATAATGGTTTTTGGTTGATTTTTATGATGAAAAATTTGTCA
AACGTTGATCAATTTAGAACAATACAGTAGCCAGAACAAGCTATTGTAAT
CACTATACAGTCGGGGACAAAAAAGAATGAAACATTGTATAAGGGGGAAG
GGGGTTTTAGACGCATGTGTTTCTATGTTTATGTCACAGATTGTAGGTAA
TGCCAATAAAAGAGGCTCCCCCAGCAGTAACGTAACTCCGACAGTCTGCT
ATGGTATCTTGAATTTTTTGTCTTCAATTGTAATTGGGTATTACTGTACG
ATCACGACACAAAACAGCAAAAAACTTTGATGATCACGCATCCCTTTGAA
AAAAGTGCAATAACACTTCAAGGCTCAAAAATCTTTCAAATCACGATCAC
GTTTTGACATTTGATCATGTATATACCATAAGAGTGGAAAAAATCTTTTG
TCTATCAGTGATCCCGACCTACGTATCATTCCTATCTTTAAAGAAGAGTG
TTGAAATTGTGTCGATATTAGACCAACTTACAGTAATCACAAAGAAGAAA
TTTCCAAATCACGCAATCACGCCAGAAAAGGTACGGTCAGCTTTGAGGAG
ACTGGTAATAAAAATACAAGAAAGATTAAAGTGATAAAGTGACGTCAATA
TAGAGCTATTCAAATGTTAAATATAGTTTGCACTCCACACAGTGGCTCAG
TAAGTCTCTAAAAAGTTTTAGCAGTAATTTGCTTAGTTTGATTTAGCTGC
AGCCTTAAAATACTGTGCGCTGAGAACAAGTTGCTCTTGTTTAATTCTTT
ACCAGTCCTCTAAAGAGCTGATGGCGCTGCCATTTAGAGCTGTGTCAACA
TTAGATCAACTTACAGTTACCAAACCATATCCAACTGTATTATATTGAGA
AGTTTCAGTAAATTTGGTTGATGTTTGTTGTGTTTGATTTTTGTTTTCCT
CATAAAGTAGTGTTAATAGTTTTTTTGTGTCAGGTGGATATCTGTTTTAG
TGAAGTGTAAGAACATTTTGTCTCAAAATTTATCAAAAGTTCAATGTATA
TGATATTAATGTATACAAGTTCACGGCACACAAGGGCCTCTGAGTACCAG
ATCTTGATTACAATTGTCATGTCTCGAATCTTTTCAGATGTTTTTTCCAA
GCTTCGTTAAGTCTTTCTTGGAGAACTGAAACTGCCTTGAGATACAAAAA
AGAAGAGCTGACTGGAGCTGAAGATTTTCTGGTAAATTTATTTGTTTGGT
ACTGATAGATTGTTGTATGAACTTTTGGGTATGATTTAAGAAATGGTTTC
CTAGGCTGAGTCTTCAAACCTTTTTGACTAGTCCATAGCGAGATGTGTCA
TCCTTGAAGAGGTGCCATTAGATTTGACCAGCTTAGTTAACTGGGGTAAA
ATATGTCATCCCTCTGGTGTATGTGCTTTTATCTGCGATCCAAAAGATAT
CTGCAGTCTGATTGGTTAAAAAAGGTACAATACATCTTGTATTTTACATG
TAAAAATAGTNNGGAGCCGGGAGTGAGGGAGTCTATCCCCTTTTCTATTT
GCGCTAGACCTGGGAGATCGAATACTGAGGTGGAGCGCCACACCTACTCT
CAGCTCCCAGTAACTAAAATATAAATTGACAAAAAGAGTTGTGCATTGTA
GCGGCAGCAGCAATCTAACGTCACTTTGCTACAAAAGTGCCCTGCTTTTT
TTTCCAAAACAAAAAGTGCATTTTTTGGGTCACCGATAAACCAGTTATCA
GACATTTGCTTGTACAATATGGAAATATTTCACTCGTTCCGGATTTTCTG
TATATTTTCCTCGCCTAAAGGCTCGTAAAATATTGTACTCGCAAATGTCG
GATAACTATTACGTATGCAACCTTATGAAATACTTGAATGCTCAATGTAT
AATATGTAATCTCGATNGGATAACTATTACATATGCAACCTTATGAAATG
CTTGAATGCTCAATGTATAATATGTAATCTCGATTATAATAGCATTGAAT
GGGTCAAGGGAAAGTGTATTCCTTTAGGAGTGATTCCTGATTTAAAATTT
GGAAAATTAAGGGTATTGAGAAGTTGGATTTTAATGTTTTGTTTGGTTGG
GTATAGTCTTCTTTTTCTATGAATCATCATTTTTGCTCAGTTGATTATTA
GGTTTTTATTAGTTTTAAAGGATTCAAAGAAACATTCCCAGACGATATTC
GATTGAGATTCGATTGCGTTCGACAATCGAATTTAAATCGGTCGATTGCG
TTCGATTTGGTTCGACTGGTTGGATCATCGATTCCGTTCGATTGAGATCG
TCTGGACATTCAGAGGCAAAAAGTTGATCTGTGGGTCATTTGGCTACTAT
ACATCTATTCATTACATTTATTACTACTACATCTATGTGATTTGGCAAAG
AATTTAAAGTGTCATCCATAATTGTAATTTGGGCCATTTTCATTGAAGAT
ATGTGATTGACTATTTTGATGTTTTCATGGTTGTAAGGAGAACATGAAAT
TTGACTTGATGGTATGATGAGGGGGTGCCATAGTTTCGACATATCTGGCT
TGGCTTAGCAAAGAGACTGGAGATCGTAGCTATTTGGCTGAAATGGTTTT
GCTGCTAGTTTTTTTTTCTTAAATAACAGAGCGATGAGTTTGCCCTGAAA
GATACAACATGTTTTAGATGAATTTGCATTTTAATTCCCAATGTATCAAT
CTTTTTTTTTGCTTTCTTGTTGCTTTCAATTAAAAAATTACACTCGTACA
AATATCAGTTTACACAGCTAAGAAACAATTTTAATGACATTTATACCATG
TGTCAGCTTGTCTTGAATCCTGAAGGTTTGAAATATACCTTTTGATTGCA
ATGTCACACTTTAATAATTGTTTCAAGTTACTCTGTAGGATTTGAAAACC
AATTGTAGAAAACTTTTTAAGTATGAAACTGTTACCTGTCATGAAACTTT
AATCTAGAAGTACTTAATACCAAACAGCTGTTTTATGATGGAAATCCCTC
AAAAATGAACAAAGATATATCATCATATATAATTACAATAGCCTGCAAAA
TTGAAGGCTTGTACAAGAAAGAAAAATTCCCGGTTATTTGCTAGCAAGTG
TCTGCTTGGATTAAATCCTTTAGAAATAGAATTTATACAATTAATTGTCG
CTGACATAATGTCTACCGGCTTGCAATTGATAATTGCAGGACTCAAGTGG
AGAGTTTCCAGCAAGATGCCAATAGATTTAATGGTATCAGCCAGAAGAAT
TTTTATGTAGTTAAAATCATTAGGCGATTCTCAAATGTATTTTGGCTTAG
AACCTTAGCTAGGTACTAATTTTTTTATGCTTTTAGTTTGGACGGTTTGA
AAAATGTAACTACCATTTAAAAATGGTGAAGAGGTTCTTACTTTGAAAAC
TCTAAATAATTTTGTTACAATATCTTTGTTTATGTTACAGGAAGCCTTCT
GGAATGCGGCTTGAAGAGAACTTGCTGCATGAAGAAAGCAGAGGAAAACT
TGTTATCTTCAAGTGAAAAAGCCCGCATTGGCTTGTCTAACCCACTTCAC
AAATTGAAAGATATGTTTCAAGGGAAAAGAGTGGAGTTTAAAGGTATGTC
ATATTGTTTATTCAAAAGATATTCCCACTCAGCGATACAATATGAAGATA
TTGAGTTGCATTTGCATAAGGCTGTTCAAATTAACAATGGCATAAATTAA
AAGCAGGAAGGACGAGAGTTGAAATGACTATATTAAATGACAAGAGGAAG
AGACCTTTGATTTGATGGCTTCCCCTTTAAAAGGTTGTACCAACCTCTCA
TTAATTCTCATGTCATTGAATACCAAAGAAAGTATAGAAAAGTGCTTCTT
GCGTAATTTCCGCGTATTTTCCGCGGTAAAGAGTGCAGGAAAAGTGAGCA
CGCTATTCTATTTTGAACCCTTTGTCTATTGATATTGCTCAATCATTTTG
TTTGACATTTTGAAGTTAAAAAAAAAGGCTGAAGCCCTTGCAAAGTACAA
GAGTATTTTTTCATGATGAAGCTAATCCCGAATTTAATCCTTTGTCACTT
CTTTACCGAAAGATACAAACTTTTCAACCATTTAAAATATACCCTTATGG
CTAACAAGAATAAATACCCTTTTACTTTTTTGTGTCATTTTCAAGGTTCT
CATCTTTCCCTTTCCATATGTTCTACTTTTATTAAAAATGACACGGACCA
ATAATTGGTTTGTCATGGGGAGATTTTGTACTCGAACACTTTTCTTTTAT
GAGAAGGGATCGTCATTTGCTAAGCTGATTATTGATGAATCAAATTTCCT
TCGCTTTTATTCTCCTCTTTATTTTCGTCGCCTTGGTGTGACGCGTCATT
TGTACAAAGAGAAATCGATGACAATTTGGGTTATTTGTGATCTTATGTTA
CTTCACATTTTTGAAACAAGCTTCTAATTTTTTATTTTCATTTTCATAAT
GGGCATTAAAAAAGTTAGCACATCCAAAGATCTTCCAGTTCACAAACTTT
GTCATTGCTCACGGACGAAGTATAAGAATTTTTTGCTTTTTTAATCACTC
ACTAATCTTTATGGCTCCATTAAAGACCTTTCCCTTGGTTTCAAATCCTT
TTGTTAATGTTTTACTAATTGGATTCTGGTTTCATTGCTGATCATTAAGT
TTGAAATTATTTTTCGTGGTTTTTTTATCACTAAAACTCGTCGTGGTTTT
TTCCTAATGTTGATTATCCCCCTCTTTTTTAAGACAACTATCAAATTATG
ATGAACGTGTCACAGAGTAACCTCCATTCCATGTTCGAAAACACGTACAA
ATCACACTACACGAACAATGCTTATATTATCGATGATTTATACAAATCCC
TTCGACAATACATTAATGGTGGAGAACTTGACTTGAGAGTGAAATTCAAC
ACTTTCTTCGGAAATCTCCACGAAAAAGTTTACGTCATGGTTAACCCTGG
CAAAACTTTCGATGCAAAATACAGAAATTGTATCCGAGACAACACGAACT
CTGTCAAACCTTTTGGCGACAAACAAAACACAATTTCCACACAAATGACC
CGAGCTTTTGAAGCGTCGAGGGTATTTTTACAAGGCCTCAAAGAAGGCAT
GGACGTTAGTTTGAAATTACTGGATTCACCAGTTCATGAAAAGTGTAAAT
TAGCTTTCATGAAAATGTCAAAATGCTCGATATGTTATGGACTCAATCCT
AACGGGAAACCCTGCGCCAATTATTGTTTGAATGTAATGAAAGGCTGTTA
CGCTTACACTATGATGTTTCAACCGCGATGGAATACTTATATTCACGCTA
TGACGGAGCTAGTCGCTAAATTAAAAGGTCCCTTTAATATGGAAGTATTC
GTTGTACCATTGGGCGTTCAGATTTCTGGAGCTATCATGACCTTCCAAGA
GAATATTCAGAATGTCACACGCAAGGTAAATCAATCATGATACGTTAGAA
ATATTATATTAAAGATGCCATTTATTTTAAATACGATTTCTGTCTAGGTT
GTTGAATTAAACATGCTTATTGGTAGGAGCATAATGCGGAATTTTTAATC
AATCAAAATATGAGATAAGGTTATTTCTGCCTCCAAAAGAATTTTATCTT
CTATTTAAATCGTCTGTTTGGTCGAAATATTTTAATATCGTTTTCTCTTT
TCTTTCCGATAACAATCTTTCTCGATATTCTACTAATCGGATTTTATTTA
TGCTTAGACGAGATGAGTAGAAGATTTTGGTTTTTGAATATTTTAGGTTG
AAGCTGTGTGTGGCCAACCAGCCGCAAACAAGAACTTCCTGAATGGCGAT
GCAAATTCGAGAAGTCGCCGTGACACAGCAGCGGCCGACCAAGCCAAGAA
GTCATTAGACCGGTTGAAAGTCTCTTCGGAACAAGTGGTTAGCTCTGGCA
CCGATTTCCAGAAACAGACACAGGCCATAATTGATAGTTTGAAAAACGAC
CGCTTCATCCCAAGGTTCATGATGGGAAAAGAGGAAGATATCAAGGCCAC
AGCTTATGAAAAGTGAGTTGTTGTTTTTTTGTTTATTTTGGGCTTCTTTT
AGAAAGAAAGTCTGGTTGACTTCCGTCAACACTTTGGTTTTGTCTGTCTT
TGGAAAGATGACCCCCTTCTTTTTGACGATCTGTTATATAACTGACATAA
AGATATCACAACAAGTAGAGATCGATAAAGAACACATTTCTTTTGATTAT
TACACCATGAATTGAGTAACGCCCTCTTATTTCCTCCAAAGCCAAAAGGC
GTTCTTTAGTCAATTGAGTAAAAAGAAGGGTTGATAAAATCAACCTTTCC
AATTTCCGACGTAATTATAACGAAATTTGTTTTTTGTTGTGTTTTTCGAC
TACACTACGTTATAACTTCACGAGAGTTTTATTGAAAAGGCTTTTACATT
TTTTCACGCCTTTTTGACACGCTCTTTTTGCTGACTGACGCTAGGTAGGT
TTGTTGGTTTTAGCATGCTTGGACACTGCTAGTAACTTTTGTCTCCCCTT
TCATTCAGACTTCTCGCAGAAACGAAGAAAAAGTTGAGGGATTTGGAGGA
TTATTGGTATCTTTTACCAAATCAAATATGTTCGGCTGGAATTGCTTCAC
AAAATAACACTAATTGTTGGAACGGCCAAAACACTAATGGGTAAGTGAAA
AATACGAATTATCCTTTTNAAGGGCCCCCCCCCCCGTTTATTAATCTCTA
AGAATATTTCCAGCTGTCAAATAGAAGGCCCCTTATTTTGCTCTAAATAG
CCTGATTTTAGCCTATTTTTACCTTATTTTTGGGTTTCAGAAGTTCAATT
TCCAACCCCCCGGCAATTAGCCCCGCCCCCCCGTTTATTTGGAACCTAAG
AGTATATTACAATAGCGCTACGCGTCGCATACGTCACTATTATCTTAGCT
AAAATTGTACGACTTTAAATCCCACAGTTTATTTGGAAATGGTTGGAAAA
CTGAGAAAGATTACCTTTTTGCTATTGTAAGCATTAACGTGCAAGATCAA
TTAACGTAAAGAAGGACGGGACTGAAAGTCGTACAAACAAGAAAATTTAT
GTAGATTTGAGACTAATTTTAGAGTCAAAGCAGTGTGCTTTTTTGCCGCT
TGGTAACTTGACTGTTATTTGTGAATCTAGATTTAAGTATTAAGTTTAAT
TATAAAAGTAAGTAGAATTGGGTGTCATTGATTAAAGTCGTGACGGAAAT
TTAAAAAAAGTTTTATTCGTGCGAAATACCATCACTTGAAATTAATGTGA
CCCCTGATCGAATTCGGTGAATGAAAAAAAATGATTGCGCTTTCTTTTCC
AGTTACACGAAACCAGTGGTAAAAGGAAATCTCAAAGACCTTTTCAACTC
TAACCCAGAAATGGATTTGACATCAAAATCTAAAGAGTACGATAGTGGCG
TGTTGACACTGGATGCCAAACTTCAAGACATTATCAAACAAATCGATTCG
GTGATGGGAGGCAACGGTATCGTGCAGCCAGATACTGAAGCCTCAGGTTC
TGGCAGCGGTGACGACAGTTCTGGCGATAATGACAATGAAGGGAGTGGTG
AACGACCTGCCACTACTGAGGAACCAGAGGAAGGTTCTGCGACAGGCAGC
GGTGACGGGAAGAATGGTGGTGGTGAGAATAAGACGAAGCCTCCAGTTCG
CGTCACTACTGAATCCAACAGCGTGGTCACGGATGCACCTACCATCCCTA
CGTGTCATCCCAATGATGCTAACTGCTTACCCGACGAAAATAATATTGGG
CCAAACGGCGTTAACGCTGCTGCTCCACCCGAAATTCCACCATGGCAATC
TCGTAATAAACAAACTCAAGAAAACCCTAGTAATGCCAGTACCACCTTAA
CAACGAACTTTTCTTTCATATCTACACTGGTCGTATTAATAGTTTACTGG
ATCTGGTAATAAGTTTAACATGATTATATTTGCTGCACTCTCGACGGTGT
TGCTCGAGGTATAATACTTTTAAAAGAAGGTTGATATGAGTGCCCAATCG
AAGGGAATGCTCCTCGTGTTTGTATTTTGTTATGACGCGTGTATGCCGAA
CAATGGATATGTTACGGTATTGGTCAGAAATAAATATGTTAATATTAATC
CATGAATGGAAGACTTTTCTTTGGGATAAATCTTCCTTACTAAGTTAAGA
AAAATGAACGTTTTTATTATTATATTAATATGAAGTTCTTATTAGCCCCA
AATATCTAGATTTTAAGAGTACAGTAACTTCATTCTCCATTCATTAAACC
TCTAAATTGTAAATAACAAGAAATCACCAATTTCAAAAATATTTTAGGTC
GATCGCCAAAACTTTTCCAAGTTCGGCATTTTGTTACCTTACTGACTATT
TCTCAAGCGATAGGTAAAATACTATTTAACGGTGTTGATGTGAAATTCAA
TGGATTTGATTTTGCATCGTGAACACAATAAACATGTCATTTTTGTATAT
AGGTGAAAATTTTTTATATATTATTGATCATGATGTTCTTGGCTTTCGCT
GTTCATAGCCATCAACCTCAAAGATTTGTTTCGATTATAAAGTACTGGTT
GAAGAGGCTGTTTTCTTTTGTCGCAGTTTGCAGGAACCTTCTATGGCTGT
TTTGTTTCCAAAACTATCAAAAACCCTATCAGGTGGTGCAGCGATACAAG
GTTCGTGCAAACACACTGTCTCTTTTGTTCTATAGTGTTCCTTATTATAT
TATTATTATTTTTTGTTACTTACTTTATATTCTTTGTTACTAATTTGAAA
TAATTTTATAAAATCGTTTTTATTTATCTAAGTACATGAATGAATGTCTA
ACAAATTGTAAAATGTGGACAGTTTTTGGTATTCTGAAAGCTGTGCCAAA
AGTCCATCTTCTCTCCGTTAAGTGTAACTTTTCTTTTTTATTGTGAAAGT
TTGTTTTATTTTTATTGATTGTTTTTACGCATAAAAATGTAAAACATTTT
ATAATATGCGTCGCACTGCCTCTTGAATATCAAGCCATTTGTATCTTTTT
TCGCGAACTTCCAGTCATTGTCGTTCGCTCAAATTCTTGTCATATTCGAA
AAAAGTGCTTACAGTTACAACTCAATACGAAGTTTGAATGGTGTTTTCTG
CTTATCTATGTTTGAGGTTTTTAGCTTGATTTGATGAAGATGTTTGAGAA
ATGTCAGTGGAAAATGGAAAAGTTTCAGCGTGAGCGAGCAATGCTTATAT
TTTTTATATCATGTTATTGTGAACACTATACTTTTTTAAATAAATAAAAA
CTAAGTGATATCTACTCCCGAATTGTCGTGGATTTGACTTTTCTTACCTT
ACACATAACTAGGTTTAAATTAAATTACTTTCATAATTTAACGCGTACCT
TGGACGGAGCTGTTTTATTTAAATATCGTAATTCATTTACTCCAATAATT
A

Coding sequence (CDS) from alignment at scaffold_148:159874..169674-

>TCONS_00048919 ID=TCONS_00048919|Name=TCONS_00048919|organism=Clytia hemisphaerica|type=CDS|length=12348bp|location=Sequence derived from alignment at scaffold_148:159874..169674- (Clytia hemisphaerica)
TTACACGAAACCAGTGGTAAAAGGAAATCTCAAAGACCTTTTCAACTCTA
ACCCAGAAATGGATTTGACATCAAAATCTAAAGAGTACGATAGTGGCGTG
TTGACACTGGATGCCAAACTTCAAGACATTATCAAACAAATCGATTCGGT
GATGGGAGGCAACGGTATCGTGCAGCCAGATACTGAAGCCTCAGGTTCTG
GCAGCGGTGACGACAGTTCTGGCGATAATGACAATGAAGGGAGTGGTGAA
CGACCTGCCACTACTGAGGAACCAGAGGAAGGTTCTGCGACAGGCAGCGG
TGACGGGAAGAATGGTGGTGGTGAGAATAAGACGAAGCCTCCAGTTCGCG
TCACTACTGAATCCAACAGCGTGGTCACGGATGCACCTACCATCCCTACG
TGTCATCCCAATGATGCTAACTGCTTACCCGACGAAAATAATATTGGGCC
AAACGGCGTTAACGCTGCTGCTCCACCCGAAATTCCACCATGGCAATCTC
GTAATAAACAAACTCAAGAAAACCCTAGTAATGCCAGTACCACCTTAACA
ACGAACTTTTCTTTCATATCTACACTGGTCGTATTAATAGTTTACTGGAT
CTGGTAAACTTCTCGCAGAAACGAAGAAAAAGTTGAGGGATTTGGAGGAT
TATTGGTATCTTTTACCAAATCAAATATGTTCGGCTGGAATTGCTTCACA
AAATAACACTAATTGTTGGAACGGCCAAAACACTAATGGGTTGAAGCTGT
GTGTGGCCAACCAGCCGCAAACAAGAACTTCCTGAATGGCGATGCAAATT
CGAGAAGTCGCCGTGACACAGCAGCGGCCGACCAAGCCAAGAAGTCATTA
GACCGGTTGAAAGTCTCTTCGGAACAAGTGGTTAGCTCTGGCACCGATTT
CCAGAAACAGACACAGGCCATAATTGATAGTTTGAAAAACGACCGCTTCA
TCCCAAGGTTCATGATGGGAAAAGAGGAAGATATCAAGGCCACAGCTTAT
GAAAAACAACTATCAAATTATGATGAACGTGTCACAGAGTAACCTCCATT
CCATGTTCGAAAACACGTACAAATCACACTACACGAACAATGCTTATATT
ATCGATGATTTATACAAATCCCTTCGACAATACATTAATGGTGGAGAACT
TGACTTGAGAGTGAAATTCAACACTTTCTTCGGAAATCTCCACGAAAAAG
TTTACGTCATGGTTAACCCTGGCAAAACTTTCGATGCAAAATACAGAAAT
TGTATCCGAGACAACACGAACTCTGTCAAACCTTTTGGCGACAAACAAAA
CACAATTTCCACACAAATGACCCGAGCTTTTGAAGCGTCGAGGGTATTTT
TACAAGGCCTCAAAGAAGGCATGGACGTTAGTTTGAAATTACTGGATTCA
CCAGTTCATGAAAAGTGTAAATTAGCTTTCATGAAAATGTCAAAATGCTC
GATATGTTATGGACTCAATCCTAACGGGAAACCCTGCGCCAATTATTGTT
TGAATGTAATGAAAGGCTGTTACGCTTACACTATGATGTTTCAACCGCGA
TGGAATACTTATATTCACGCTATGACGGAGCTAGTCGCTAAATTAAAAGG
TCCCTTTAATATGGAAGTATTCGTTGTACCATTGGGCGTTCAGATTTCTG
GAGCTATCATGACCTTCCAAGAGAATATTCAGAATGTCACACGCAAGGAA
GCCTTCTGGAATGCGGCTTGAAGAGAACTTGCTGCATGAAGAAAGCAGAG
GAAAACTTGTTATCTTCAAGTGAAAAAGCCCGCATTGGCTTGTCTAACCC
ACTTCACAAATTGAAAGATATGTTTCAAGGGAAAAGAGTGGAGTTTAAAG
ATGAAGTGGTTTTTCTTCCTTTTTGGGGTATGGAATTNTTGTTTGCGAGG
AAATATGAAGCGGTTTTTCCTCCTTTTTGGGGTATGGAATTTAGTGGTGA
TTTCACAGCCAAAATCTATGAACCTGACCAGTTCCTGCGAATTTGCTAAG
AAAACTTATCGAGATGCAGGATACAAAGACGAGGATATTTTCACAACCGA
GCAAGAAGTTACACGAAACCAGTGGTAAAAGGAAATCTCAAAGACCTTTT
CAACTCTAACCCAGAAATGGATTTGACATCAAAATCTAAAGAGTACGATA
GTGGCGTGTTGACACTGGATGCCAAACTTCAAGACATTATCAAACAAATC
GATTCGGTGATGGGAGGCAACGGTATCGTGCAGCCAGATACTGAAGCCTC
AGGTTCTGGCAGCGGTGACGACAGTTCTGGCGATAATGACAATGAAGGGA
GTGGTGAACGACCTGCCACTACTGAGGAACCAGAGGAAGGTTCTGCGACA
GGCAGCGGTGACGGGAAGAATGGTGGTGGTGAGAATAAGACGAAGCCTCC
AGTTCGCGTCACTACTGAATCCAACAGCGTGGTCACGGATGCACCTACCA
TCCCTACGTGTCATCCCAATGATGCTAACTGCTTACCCGACGAAAATAAT
ATTGGGCCAAACGGCGTTAACGCTGCTGCTCCACCCGAAATTCCACCATG
GCAATCTCGTAATAAACAAACTCAAGAAAACCCTAGTAATGCCAGTACCA
CCTTAACAACGAACTTTTCTTTCATATCTACACTGGTCGTATTAATAGTT
TACTGGATCTGGTAAACTTCTCGCAGAAACGAAGAAAAAGTTGAGGGATT
TGGAGGATTATTGGTATCTTTTACCAAATCAAATATGTTCGGCTGGAATT
GCTTCACAAAATAACACTAATTGTTGGAACGGCCAAAACACTAATGGGTT
GAAGCTGTGTGTGGCCAACCAGCCGCAAACAAGAACTTCCTGAATGGCGA
TGCAAATTCGAGAAGTCGCCGTGACACAGCAGCGGCCGACCAAGCCAAGA
AGTCATTAGACCGGTTGAAAGTCTCTTCGGAACAAGTGGTTAGCTCTGGC
ACCGATTTCCAGAAACAGACACAGGCCATAATTGATAGTTTGAAAAACGA
CCGCTTCATCCCAAGGTTCATGATGGGAAAAGAGGAAGATATCAAGGCCA
CAGCTTATGAAAAACAACTATCAAATTATGATGAACGTGTCACAGAGTAA
CCTCCATTCCATGTTCGAAAACACGTACAAATCACACTACACGAACAATG
CTTATATTATCGATGATTTATACAAATCCCTTCGACAATACATTAATGGT
GGAGAACTTGACTTGAGAGTGAAATTCAACACTTTCTTCGGAAATCTCCA
CGAAAAAGTTTACGTCATGGTTAACCCTGGCAAAACTTTCGATGCAAAAT
ACAGAAATTGTATCCGAGACAACACGAACTCTGTCAAACCTTTTGGCGAC
AAACAAAACACAATTTCCACACAAATGACCCGAGCTTTTGAAGCGTCGAG
GGTATTTTTACAAGGCCTCAAAGAAGGCATGGACGTTAGTTTGAAATTAC
TGGATTCACCAGTTCATGAAAAGTGTAAATTAGCTTTCATGAAAATGTCA
AAATGCTCGATATGTTATGGACTCAATCCTAACGGGAAACCCTGCGCCAA
TTATTGTTTGAATGTAATGAAAGGCTGTTACGCTTACACTATGATGTTTC
AACCGCGATGGAATACTTATATTCACGCTATGACGGAGCTAGTCGCTAAA
TTAAAAGGTCCCTTTAATATGGAAGTATTCGTTGTACCATTGGGCGTTCA
GATTTCTGGAGCTATCATGACCTTCCAAGAGAATATTCAGAATGTCACAC
GCAAGGAAGCCTTCTGGAATGCGGCTTGAAGAGAACTTGCTGCATGAAGA
AAGCAGAGGAAAACTTGTTATCTTCAAGTGAAAAAGCCCGCATTGGCTTG
TCTAACCCACTTCACAAATTGAAAGATATGTTTCAAGGGAAAAGAGTGGA
GTTTAAAGATGAAGTGGTTTTTCTTCCTTTTTGGGGTATGGAATTNTTGT
TTGCGAGGAAATATGAAGCGGTTTTTCCTCCTTTTTGGGGTATGGAATTT
AGTGGTGATTTCACAGCCAAAATCTATGAACCTGACCAGTTCCTGCGAAT
TTGCTAAGAAAACTTATCGAGATGCAGGATACAAAGACGAGGATATTTTC
ACAACCGAGCAAGAAGTTACACGAAACCAGTGGTAAAAGGAAATCTCAAA
GACCTTTTCAACTCTAACCCAGAAATGGATTTGACATCAAAATCTAAAGA
GTACGATAGTGGCGTGTTGACACTGGATGCCAAACTTCAAGACATTATCA
AACAAATCGATTCGGTGATGGGAGGCAACGGTATCGTGCAGCCAGATACT
GAAGCCTCAGGTTCTGGCAGCGGTGACGACAGTTCTGGCGATAATGACAA
TGAAGGGAGTGGTGAACGACCTGCCACTACTGAGGAACCAGAGGAAGGTT
CTGCGACAGGCAGCGGTGACGGGAAGAATGGTGGTGGTGAGAATAAGACG
AAGCCTCCAGTTCGCGTCACTACTGAATCCAACAGCGTGGTCACGGATGC
ACCTACCATCCCTACGTGTCATCCCAATGATGCTAACTGCTTACCCGACG
AAAATAATATTGGGCCAAACGGCGTTAACGCTGCTGCTCCACCCGAAATT
CCACCATGGCAATCTCGTAATAAACAAACTCAAGAAAACCCTAGTAATGC
CAGTACCACCTTAACAACGAACTTTTCTTTCATATCTACACTGGTCGTAT
TAATAGTTTACTGGATCTGGTAAACTTCTCGCAGAAACGAAGAAAAAGTT
GAGGGATTTGGAGGATTATTGGTATCTTTTACCAAATCAAATATGTTCGG
CTGGAATTGCTTCACAAAATAACACTAATTGTTGGAACGGCCAAAACACT
AATGGGTTGAAGCTGTGTGTGGCCAACCAGCCGCAAACAAGAACTTCCTG
AATGGCGATGCAAATTCGAGAAGTCGCCGTGACACAGCAGCGGCCGACCA
AGCCAAGAAGTCATTAGACCGGTTGAAAGTCTCTTCGGAACAAGTGGTTA
GCTCTGGCACCGATTTCCAGAAACAGACACAGGCCATAATTGATAGTTTG
AAAAACGACCGCTTCATCCCAAGGTTCATGATGGGAAAAGAGGAAGATAT
CAAGGCCACAGCTTATGAAAAACAACTATCAAATTATGATGAACGTGTCA
CAGAGTAACCTCCATTCCATGTTCGAAAACACGTACAAATCACACTACAC
GAACAATGCTTATATTATCGATGATTTATACAAATCCCTTCGACAATACA
TTAATGGTGGAGAACTTGACTTGAGAGTGAAATTCAACACTTTCTTCGGA
AATCTCCACGAAAAAGTTTACGTCATGGTTAACCCTGGCAAAACTTTCGA
TGCAAAATACAGAAATTGTATCCGAGACAACACGAACTCTGTCAAACCTT
TTGGCGACAAACAAAACACAATTTCCACACAAATGACCCGAGCTTTTGAA
GCGTCGAGGGTATTTTTACAAGGCCTCAAAGAAGGCATGGACGTTAGTTT
GAAATTACTGGATTCACCAGTTCATGAAAAGTGTAAATTAGCTTTCATGA
AAATGTCAAAATGCTCGATATGTTATGGACTCAATCCTAACGGGAAACCC
TGCGCCAATTATTGTTTGAATGTAATGAAAGGCTGTTACGCTTACACTAT
GATGTTTCAACCGCGATGGAATACTTATATTCACGCTATGACGGAGCTAG
TCGCTAAATTAAAAGGTCCCTTTAATATGGAAGTATTCGTTGTACCATTG
GGCGTTCAGATTTCTGGAGCTATCATGACCTTCCAAGAGAATATTCAGAA
TGTCACACGCAAGGAAGCCTTCTGGAATGCGGCTTGAAGAGAACTTGCTG
CATGAAGAAAGCAGAGGAAAACTTGTTATCTTCAAGTGAAAAAGCCCGCA
TTGGCTTGTCTAACCCACTTCACAAATTGAAAGATATGTTTCAAGGGAAA
AGAGTGGAGTTTAAAGATGAAGTGGTTTTTCTTCCTTTTTGGGGTATGGA
ATTNTTGTTTGCGAGGAAATATGAAGCGGTTTTTCCTCCTTTTTGGGGTA
TGGAATTTAGTGGTGATTTCACAGCCAAAATCTATGAACCTGACCAGTTC
CTGCGAATTTGCTAAGAAAACTTATCGAGATGCAGGATACAAAGACGAGG
ATATTTTCACAACCGAGCAAGAAGTTACACGAAACCAGTGGTAAAAGGAA
ATCTCAAAGACCTTTTCAACTCTAACCCAGAAATGGATTTGACATCAAAA
TCTAAAGAGTACGATAGTGGCGTGTTGACACTGGATGCCAAACTTCAAGA
CATTATCAAACAAATCGATTCGGTGATGGGAGGCAACGGTATCGTGCAGC
CAGATACTGAAGCCTCAGGTTCTGGCAGCGGTGACGACAGTTCTGGCGAT
AATGACAATGAAGGGAGTGGTGAACGACCTGCCACTACTGAGGAACCAGA
GGAAGGTTCTGCGACAGGCAGCGGTGACGGGAAGAATGGTGGTGGTGAGA
ATAAGACGAAGCCTCCAGTTCGCGTCACTACTGAATCCAACAGCGTGGTC
ACGGATGCACCTACCATCCCTACGTGTCATCCCAATGATGCTAACTGCTT
ACCCGACGAAAATAATATTGGGCCAAACGGCGTTAACGCTGCTGCTCCAC
CCGAAATTCCACCATGGCAATCTCGTAATAAACAAACTCAAGAAAACCCT
AGTAATGCCAGTACCACCTTAACAACGAACTTTTCTTTCATATCTACACT
GGTCGTATTAATAGTTTACTGGATCTGGTAAACTTCTCGCAGAAACGAAG
AAAAAGTTGAGGGATTTGGAGGATTATTGGTATCTTTTACCAAATCAAAT
ATGTTCGGCTGGAATTGCTTCACAAAATAACACTAATTGTTGGAACGGCC
AAAACACTAATGGGTTGAAGCTGTGTGTGGCCAACCAGCCGCAAACAAGA
ACTTCCTGAATGGCGATGCAAATTCGAGAAGTCGCCGTGACACAGCAGCG
GCCGACCAAGCCAAGAAGTCATTAGACCGGTTGAAAGTCTCTTCGGAACA
AGTGGTTAGCTCTGGCACCGATTTCCAGAAACAGACACAGGCCATAATTG
ATAGTTTGAAAAACGACCGCTTCATCCCAAGGTTCATGATGGGAAAAGAG
GAAGATATCAAGGCCACAGCTTATGAAAAACAACTATCAAATTATGATGA
ACGTGTCACAGAGTAACCTCCATTCCATGTTCGAAAACACGTACAAATCA
CACTACACGAACAATGCTTATATTATCGATGATTTATACAAATCCCTTCG
ACAATACATTAATGGTGGAGAACTTGACTTGAGAGTGAAATTCAACACTT
TCTTCGGAAATCTCCACGAAAAAGTTTACGTCATGGTTAACCCTGGCAAA
ACTTTCGATGCAAAATACAGAAATTGTATCCGAGACAACACGAACTCTGT
CAAACCTTTTGGCGACAAACAAAACACAATTTCCACACAAATGACCCGAG
CTTTTGAAGCGTCGAGGGTATTTTTACAAGGCCTCAAAGAAGGCATGGAC
GTTAGTTTGAAATTACTGGATTCACCAGTTCATGAAAAGTGTAAATTAGC
TTTCATGAAAATGTCAAAATGCTCGATATGTTATGGACTCAATCCTAACG
GGAAACCCTGCGCCAATTATTGTTTGAATGTAATGAAAGGCTGTTACGCT
TACACTATGATGTTTCAACCGCGATGGAATACTTATATTCACGCTATGAC
GGAGCTAGTCGCTAAATTAAAAGGTCCCTTTAATATGGAAGTATTCGTTG
TACCATTGGGCGTTCAGATTTCTGGAGCTATCATGACCTTCCAAGAGAAT
ATTCAGAATGTCACACGCAAGGAAGCCTTCTGGAATGCGGCTTGAAGAGA
ACTTGCTGCATGAAGAAAGCAGAGGAAAACTTGTTATCTTCAAGTGAAAA
AGCCCGCATTGGCTTGTCTAACCCACTTCACAAATTGAAAGATATGTTTC
AAGGGAAAAGAGTGGAGTTTAAAGATGAAGTGGTTTTTCTTCCTTTTTGG
GGTATGGAATTNTTGTTTGCGAGGAAATATGAAGCGGTTTTTCCTCCTTT
TTGGGGTATGGAATTTAGTGGTGATTTCACAGCCAAAATCTATGAACCTG
ACCAGTTCCTGCGAATTTGCTAAGAAAACTTATCGAGATGCAGGATACAA
AGACGAGGATATTTTCACAACCGAGCAAGAAGTTACACGAAACCAGTGGT
AAAAGGAAATCTCAAAGACCTTTTCAACTCTAACCCAGAAATGGATTTGA
CATCAAAATCTAAAGAGTACGATAGTGGCGTGTTGACACTGGATGCCAAA
CTTCAAGACATTATCAAACAAATCGATTCGGTGATGGGAGGCAACGGTAT
CGTGCAGCCAGATACTGAAGCCTCAGGTTCTGGCAGCGGTGACGACAGTT
CTGGCGATAATGACAATGAAGGGAGTGGTGAACGACCTGCCACTACTGAG
GAACCAGAGGAAGGTTCTGCGACAGGCAGCGGTGACGGGAAGAATGGTGG
TGGTGAGAATAAGACGAAGCCTCCAGTTCGCGTCACTACTGAATCCAACA
GCGTGGTCACGGATGCACCTACCATCCCTACGTGTCATCCCAATGATGCT
AACTGCTTACCCGACGAAAATAATATTGGGCCAAACGGCGTTAACGCTGC
TGCTCCACCCGAAATTCCACCATGGCAATCTCGTAATAAACAAACTCAAG
AAAACCCTAGTAATGCCAGTACCACCTTAACAACGAACTTTTCTTTCATA
TCTACACTGGTCGTATTAATAGTTTACTGGATCTGGTAAACTTCTCGCAG
AAACGAAGAAAAAGTTGAGGGATTTGGAGGATTATTGGTATCTTTTACCA
AATCAAATATGTTCGGCTGGAATTGCTTCACAAAATAACACTAATTGTTG
GAACGGCCAAAACACTAATGGGTTGAAGCTGTGTGTGGCCAACCAGCCGC
AAACAAGAACTTCCTGAATGGCGATGCAAATTCGAGAAGTCGCCGTGACA
CAGCAGCGGCCGACCAAGCCAAGAAGTCATTAGACCGGTTGAAAGTCTCT
TCGGAACAAGTGGTTAGCTCTGGCACCGATTTCCAGAAACAGACACAGGC
CATAATTGATAGTTTGAAAAACGACCGCTTCATCCCAAGGTTCATGATGG
GAAAAGAGGAAGATATCAAGGCCACAGCTTATGAAAAACAACTATCAAAT
TATGATGAACGTGTCACAGAGTAACCTCCATTCCATGTTCGAAAACACGT
ACAAATCACACTACACGAACAATGCTTATATTATCGATGATTTATACAAA
TCCCTTCGACAATACATTAATGGTGGAGAACTTGACTTGAGAGTGAAATT
CAACACTTTCTTCGGAAATCTCCACGAAAAAGTTTACGTCATGGTTAACC
CTGGCAAAACTTTCGATGCAAAATACAGAAATTGTATCCGAGACAACACG
AACTCTGTCAAACCTTTTGGCGACAAACAAAACACAATTTCCACACAAAT
GACCCGAGCTTTTGAAGCGTCGAGGGTATTTTTACAAGGCCTCAAAGAAG
GCATGGACGTTAGTTTGAAATTACTGGATTCACCAGTTCATGAAAAGTGT
AAATTAGCTTTCATGAAAATGTCAAAATGCTCGATATGTTATGGACTCAA
TCCTAACGGGAAACCCTGCGCCAATTATTGTTTGAATGTAATGAAAGGCT
GTTACGCTTACACTATGATGTTTCAACCGCGATGGAATACTTATATTCAC
GCTATGACGGAGCTAGTCGCTAAATTAAAAGGTCCCTTTAATATGGAAGT
ATTCGTTGTACCATTGGGCGTTCAGATTTCTGGAGCTATCATGACCTTCC
AAGAGAATATTCAGAATGTCACACGCAAGGAAGCCTTCTGGAATGCGGCT
TGAAGAGAACTTGCTGCATGAAGAAAGCAGAGGAAAACTTGTTATCTTCA
AGTGAAAAAGCCCGCATTGGCTTGTCTAACCCACTTCACAAATTGAAAGA
TATGTTTCAAGGGAAAAGAGTGGAGTTTAAAGATGAAGTGGTTTTTCTTC
CTTTTTGGGGTATGGAATTNTTGTTTGCGAGGAAATATGAAGCGGTTTTT
CCTCCTTTTTGGGGTATGGAATTTAGTGGTGATTTCACAGCCAAAATCTA
TGAACCTGACCAGTTCCTGCGAATTTGCTAAGAAAACTTATCGAGATGCA
GGATACAAAGACGAGGATATTTTCACAACCGAGCAAGAAGTTACACGAAA
CCAGTGGTAAAAGGAAATCTCAAAGACCTTTTCAACTCTAACCCAGAAAT
GGATTTGACATCAAAATCTAAAGAGTACGATAGTGGCGTGTTGACACTGG
ATGCCAAACTTCAAGACATTATCAAACAAATCGATTCGGTGATGGGAGGC
AACGGTATCGTGCAGCCAGATACTGAAGCCTCAGGTTCTGGCAGCGGTGA
CGACAGTTCTGGCGATAATGACAATGAAGGGAGTGGTGAACGACCTGCCA
CTACTGAGGAACCAGAGGAAGGTTCTGCGACAGGCAGCGGTGACGGGAAG
AATGGTGGTGGTGAGAATAAGACGAAGCCTCCAGTTCGCGTCACTACTGA
ATCCAACAGCGTGGTCACGGATGCACCTACCATCCCTACGTGTCATCCCA
ATGATGCTAACTGCTTACCCGACGAAAATAATATTGGGCCAAACGGCGTT
AACGCTGCTGCTCCACCCGAAATTCCACCATGGCAATCTCGTAATAAACA
AACTCAAGAAAACCCTAGTAATGCCAGTACCACCTTAACAACGAACTTTT
CTTTCATATCTACACTGGTCGTATTAATAGTTTACTGGATCTGGTAAACT
TCTCGCAGAAACGAAGAAAAAGTTGAGGGATTTGGAGGATTATTGGTATC
TTTTACCAAATCAAATATGTTCGGCTGGAATTGCTTCACAAAATAACACT
AATTGTTGGAACGGCCAAAACACTAATGGGTTGAAGCTGTGTGTGGCCAA
CCAGCCGCAAACAAGAACTTCCTGAATGGCGATGCAAATTCGAGAAGTCG
CCGTGACACAGCAGCGGCCGACCAAGCCAAGAAGTCATTAGACCGGTTGA
AAGTCTCTTCGGAACAAGTGGTTAGCTCTGGCACCGATTTCCAGAAACAG
ACACAGGCCATAATTGATAGTTTGAAAAACGACCGCTTCATCCCAAGGTT
CATGATGGGAAAAGAGGAAGATATCAAGGCCACAGCTTATGAAAAACAAC
TATCAAATTATGATGAACGTGTCACAGAGTAACCTCCATTCCATGTTCGA
AAACACGTACAAATCACACTACACGAACAATGCTTATATTATCGATGATT
TATACAAATCCCTTCGACAATACATTAATGGTGGAGAACTTGACTTGAGA
GTGAAATTCAACACTTTCTTCGGAAATCTCCACGAAAAAGTTTACGTCAT
GGTTAACCCTGGCAAAACTTTCGATGCAAAATACAGAAATTGTATCCGAG
ACAACACGAACTCTGTCAAACCTTTTGGCGACAAACAAAACACAATTTCC
ACACAAATGACCCGAGCTTTTGAAGCGTCGAGGGTATTTTTACAAGGCCT
CAAAGAAGGCATGGACGTTAGTTTGAAATTACTGGATTCACCAGTTCATG
AAAAGTGTAAATTAGCTTTCATGAAAATGTCAAAATGCTCGATATGTTAT
GGACTCAATCCTAACGGGAAACCCTGCGCCAATTATTGTTTGAATGTAAT
GAAAGGCTGTTACGCTTACACTATGATGTTTCAACCGCGATGGAATACTT
ATATTCACGCTATGACGGAGCTAGTCGCTAAATTAAAAGGTCCCTTTAAT
ATGGAAGTATTCGTTGTACCATTGGGCGTTCAGATTTCTGGAGCTATCAT
GACCTTCCAAGAGAATATTCAGAATGTCACACGCAAGGAAGCCTTCTGGA
ATGCGGCTTGAAGAGAACTTGCTGCATGAAGAAAGCAGAGGAAAACTTGT
TATCTTCAAGTGAAAAAGCCCGCATTGGCTTGTCTAACCCACTTCACAAA
TTGAAAGATATGTTTCAAGGGAAAAGAGTGGAGTTTAAAGATGAAGTGGT
TTTTCTTCCTTTTTGGGGTATGGAATTNTTGTTTGCGAGGAAATATGAAG
CGGTTTTTCCTCCTTTTTGGGGTATGGAATTTAGTGGTGATTTCACAGCC
AAAATCTATGAACCTGACCAGTTCCTGCGAATTTGCTAAGAAAACTTATC
GAGATGCAGGATACAAAGACGAGGATATTTTCACAACCGAGCAAGAAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_031075	XLOC_031075	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00048919-protein	TCONS_00048919-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_148	supercontig	scaffold_148:159874..169674 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
51.3289	46.425	64.1801	77.6348	427.436	296.297	110.355	118.213	80.7557	101.253	71.6587	67.3734	97.7497	83.4071	41.6888	43.7263	113.686	118.498	82.879	134.791	136.468	141.831	83.727	92.1514	79.0075	81.2585	202.493	186.597	181.878	196.25

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR001863	Glypican

Vocabulary: **Molecular Function**
Term	Definition
GO:0043395	heparan sulfate proteoglycan binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005578	proteinaceous extracellular matrix
GO:0016020	membrane

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
cellular_component	GO:0005578	proteinaceous extracellular matrix
molecular_function	GO:0043395	heparan sulfate proteoglycan binding

Blast

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BLAST of TCONS_00048919 vs. Swiss-Prot (Human)
Match: GPC6 (Glypican-6 OS=Homo sapiens GN=GPC6 PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 3.720e-57
Identity = 145/470 (30.85%), Postives = 222/470 (47.23%), Query Frame = 3

Query:  309 SCEFAKKTYRDAGYKDEDIFTTEQEGSLLE-CGLKRTCCMKKAEENLLSSSEKARIGLSNPL----HKLKDMFQGKRVEFKDNYQIMMNVSQSNLHSMFENTYKSHYTNNAYIIDDLYKSLRQYINGGELDLRVKFNTFFGNLHEKVYVMVNPGKTFDAKYRNCIRDNTNSVKPFGDKQNTISTQMTRAFEASRVFLQGLKEGMDVSLKLLDSPVHEKCKLAFMKMSKCSICYGLNPNGKPCANYCLNVMKGCYAYTMMFQPRWNTYIHAMTELVAKLKGPFNMEVFVVPLGVQISGAIMTFQENIQNVTRKVEAVCGQPAANKNFLNGDANSRSRRDTAAADQAKKSLDRLKVSSEQVVSSGTDFQKQTQAIIDSLKNDRFIPRFMMGKEEDIKATAYEKLLAETKKKLRDLEDYWYLLPNQIC---SAGIASXXXXXXXXXXXXXXYTKPVVKGNLKDLFNSNPEMDL 1694
            SC   ++ Y   G+   DI   E  G  L  C  + TCC  + E+ L   S+++++   N +    H ++  F  +  +F + ++ ++  ++ +L+ MF  TY   Y  N+ +  DL+  L++Y  GG ++L    N F+  L E+++ ++NP   F   Y  C+   T+ +KPFGD    +  Q+TRAF A+R F+QGL  G +V+ ++        C  A MKM  C  C GL P  +PC NYCLNVMKGC A        WN +I AM  +  +L+GPFN+E  + P+ V+IS AIM  QEN   V+ KV   CGQP             RS R                       S+  +F            N RF P     +      T+ ++L+ + K+KL+  +  W  LP  IC   S    + N   CWNG +   Y   ++   L +  N NPE+D+
Sbjct:   29 SCGEVRQAYGAKGFSLADIPYQEIAGEHLRICPQEYTCCTTEMEDKL---SQQSKLEFENLVEETSHFVRTTFVSRHKKFDEFFRELLENAEKSLNDMFVRTYGMLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWARLLERMFQLINPQYHFSEDYLECVSKYTDQLKPFGDVPRKLKIQVTRAFIAARTFVQGLTVGREVANRVSKVSPTPGCIRALMKMLYCPYCRGL-PTVRPCNNYCLNVMKGCLANQADLDTEWNLFIDAMLLVAERLEGPFNIESVMDPIDVKISEAIMNMQENSMQVSAKVFQGCGQPKPAPAL-------RSAR-----------------------SAPENF------------NTRFRPYNPEERPTTAAGTSLDRLVTDIKEKLKLSKKVWSALPYTICKDESVTAGTSNEEECWNGHSKARYLPEIMNDGLTNQIN-NPEVDV 451

The following BLAST results are available for this feature:

BLAST of TCONS_00048919 vs. Swiss-Prot (Human)

BLAST of TCONS_00048919 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GPC6	3.720e-57	30.85	Glypican-6 OS=Homo sapiens GN=GPC6 PE=1 SV=1	[more]

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TCONS_00048919 (transcript) - C. hemisphaerica