TCONS_00049422 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049422
Unique NameTCONS_00049422
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1353

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049422 ID=TCONS_00049422|Name=TCONS_00049422|organism=Clytia hemisphaerica|type=transcript|length=1353bp
GGAAAGTCTAGAAAGAGaaatggATTACAAAGTTGCTTCTTATTTGCTGT
TATCCTGCATACTCATAAGTCATGTACATTCCAATAACTTAACTAACACA
ATTAACACCACAAACGAAACACCAACTAACCCTCCAACGTACACAATACC
ATTGATATTACAAAATACAACAAAGCTTACACCTATTACTATTACTAACG
AGAAAATAACAACCAAATCTATGACAACTCCAATAACGACAACCAACAAC
ACAACAACTaaaaccacaacaacaacagcaacaacaactaCTACTACAAC
CCCCACAACGACTACAACTATGAGACCTTGTAGAAGAATGAAATTTATCA
ATCGAATACATCAAGCCAATCCGGAAGTCTTGACGTTGGTTGGATCCACT
TTTGTCATCGATTGTAGCGTAGACCACACTGGTGGTCCTGAACCATCTGT
CTATTGGTATAAGGATGATATTCCTCTACAAGAAAATAGCTTTAGAACCT
TTGACGAACATAGATTAAACAAGACATTCAGACTTCGTTTAGAGAATGTG
GATATTCCAGACAATGGCAAATATAAATGCACTGTCGATAATGTTTGCAG
CAAGTCAATCACCAATACTGTTAGTATTATTGTTAGAGAACAAAGGAGTG
ATGTGCCGATAATCTCAACATTTGAACCAGTGAACGCTACAAGGCTCGTG
GGTGAGGAGTTGCAATTGACTTGTGGCGCTGATTTAGAAGATGGAGAGTT
TACACCGTTTATTAAATGGGTCCGTAAAACGAGTGAGAACGTGACATCCC
ATCTTAACCACACCTATAACAACACAACCTCTACAACCACCACCACAACG
CAACCACCTTTTGGTATCATTCAAAAGAAATCAGACAAAATTCAGAATGT
CCAAAATGTCCCAAAGATGAATACTGTATCTTATATAGAAGATGATGTCC
GATACACAGTAACAGATCTGAAGTTTGAACGCACTGCATCAAGTACGTTA
TCGTTAGAGGATCTTAAAGAAGAAGATAGTGGTGTCTACACGTGTGTCAT
GTCCAATCTAAAAGGTGTTGTGCGGAAATCATCTCATGTCACCATTAACC
CTAGTAAGTACGCGTTCTTACAGATTGAAGAGCTATTTCTAATGTAAGTT
TTCAAGGGGAAAATAAGAATTCACTATCCTAGGATGGCGGAAGAGGGCAA
CGTTACGGTTTATGCATTTGCTAAATTCCTAAACTTCCCCTTTTTGactt
atacatgtttttttcataagcataacGTGTATAAGCATACCAAGAcctga
atttgtctaaaaaataagcatattacaagcataTTTCTGAGCTTGCTTTT
GAT
Run BLAST on NCBI

protein sequence of TCONS_00049422-protein

>TCONS_00049422-protein ID=TCONS_00049422-protein|Name=TCONS_00049422-protein|organism=Clytia hemisphaerica|type=polypeptide|length=381bp
ESLEREMDYKVASYLLLSCILISHVHSNNLTNTINTTNETPTNPPTYTIP
LILQNTTKLTPITITNEKITTKSMTTPITTTNNTTTKTTTTTATTTTTTT
PTTTTTMRPCRRMKFINRIHQANPEVLTLVGSTFVIDCSVDHTGGPEPSV
YWYKDDIPLQENSFRTFDEHRLNKTFRLRLENVDIPDNGKYKCTVDNVCS
KSITNTVSIIVREQRSDVPIISTFEPVNATRLVGEELQLTCGADLEDGEF
TPFIKWVRKTSENVTSHLNHTYNNTTSTTTTTTQPPFGIIQKKSDKIQNV
QNVPKMNTVSYIEDDVRYTVTDLKFERTASSTLSLEDLKEEDSGVYTCVM
SNLKGVVRKSSHVTINPSKYAFLQIEELFLM
Run BLAST on NCBI

transcript from alignment at scaffold_159:31591..38158+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049422 ID=TCONS_00049422|Name=TCONS_00049422|organism=Clytia hemisphaerica|type=transcript|length=6568bp|location=Sequence derived from alignment at scaffold_159:31591..38158+ (Clytia hemisphaerica)
GGAAAGTCTAGAAAGAGGTAAgtgatttgttttgattcgatTGCTGAGCA
GCCGTGCCGGTGTGTtgctcttttttcttcttcagctTTTTTTCTTGGGT
ATAAAATAGACCTGTTAATCAAAGCTTTGCACCCTGAACCCCCTACCAGA
GGTTAGTCCTGGACCCATTGGGGGGTACAGCACCTCCCCCTAAACCTCCT
ACCTACAAGCAGAACTTTTTTTGGTGTAGACCTCAGTTCAAACAAATAAC
CGAAATAACAATTCAGCGTAGATTTTGCAatgatgctggagtttttaatt
attcaacattacATATATATTCTGATTAGCATGATATGATGCATGTTTGG
GAGAATGcaacagtcttttgaataactaattactccagcagaattttttt
aatgaaaatgtcttACAATTGATTTGTCTTTAACACATCTATTACCTAGC
GTGTATGTACAACCTAGGTACGAGATAATTTATCCCGTTTTACGTTACTC
AAGCCAAATTCTGTttactaccgtaagttggtctaatgttgacatccgtc
ttctaatttcgacatccttctttatagataggaataataagaaggtcaaa
atcactgatagactaaagatttttcctctctaatcgcgctaatcaaagtc
aatcagcgattccgaccttatcctcagtttctattgttcctatctctaaa
gaaaggtgtcaaaattagaagacagatgtcgacattagaccaacttacgg
taaccTTAAAACAGACATCTTTGGTAATCTAGAAGGGCAACTTTTACCTC
TGCCAATGCCAAACAGGGTAGTGTCTCCTTGGTCAGTATATCATGGCtct
atcactttcaaagtggagccCTGGCCCATGGTTTCAATTCTTATTCATGT
TAAATGTCAAAGAGCGTTCTCTGTTGTCAAGTACAAGAATCGACTGACAT
ACTtacattttaatgaccagccaggtctttcatttgagggctatgcatgt
tagactccactgatgcaagttacccaatctcacacGGTACTGAcactatt
ttgttttgatgattcgtttttaacactgcaatgtttGAGTGCAAGCTCCA
CATTTTTTCCATAGGGGCACAGACCACAGTTTAAATATTATTGTTAAAAC
GGGTGTCTTTATACTGTTCAGTAGGTATTGAAGTTATAAACTTGTCCAAT
GGATAGCAACAGTGGTTAGAGTGCCAATTATACATTCATTGATATAATAC
TTCCTCACAGCTACTTGCTTCAAATATACTCCGCCCTCCTAAAAAGAGGA
GGCATTTTTCCAAAAGGGGCGTTTATtgagaaatttttctcaaaggAGAG
GCATTTATCCAAgggtgtttaaaagaagggTTTACTCAAAGTTATGGCAT
GCCATGTAGGTGTGTTTTTAAAACAGGGTCTGGACGCTCTTGAGTGAAAT
AGTACAAATATTTGATTTAAATATTTAGAAATGGGTCAAAATTAAATTAT
ACAATACAATTAGTAACCTTCAAACTATCAAAGGCAGGTTTTAGGGGATA
AAATGTTACATTTCATTTTGGAACGTTGCAATTTAGTAAACTTTGCCTAG
ATAACCTTGAGATGTCTAtgttttccttcttttttgtATTATGGAGATGT
TTAAATTTGAATTGATATTGTAAGCTCCTGTATTCTAAACACAGGATAAA
TGGTTTGAAAGTTTAAGAAGTTAGATtgtggcaagctattttttaaGAGA
TCTTTCTTAAAGATGAGtcctttttgaattttacatCAAAACTTCCTCCT
GTACCactgtaaaatgaaaattaaacaaaatgtTAGATTATCTTCCTAAT
AAATAttcgtaattttttttcttcagaaatggATTACAAAGTTGCTTCTT
ATTTGCTGTTATCCTGTAAGTAAAACTTTTccatttaatatttttatatt
ttttttacgaTAAAAACTTATCATGGTCAGAAAAGTCTCTATCCTTATGG
CAGGGTTCGAATTAACGTATCGCGTTTCACGATTCGCGATGCGTTTTTTG
GAAATGTACgaagaaaaaattcagaaattcaacaaaatcgcGATACAACA
TATAAAGAATTTTACAGCATTTTGAGCCTCCAAGCAAATACGATGGTTAT
TTGGCTTGTAAATTGGTCTTTAGAGTGGAGAATGCATCGTATATTGATAA
AAACGCATCGTGAAACCTAAAAAATCGTTAATCCGATCACTGTATGGGAT
CATTAATATGCCACATTAGAGCATAGAGCAAGTGATACTGCCAGCTTAGc
agaaaatcctttaaatttaaatgaaataaacatCTTTACTTTATAAGCGA
CCATGTGGGAAGGcttttcttattcaaaattaTTGACCCAGAATGAGGCA
TCACAAAAGATGGTTATATAATTTATATCTGGTCTAttattaattttgta
tttttctataAAACCATAGGCATACTCATAAGTCATGTACATTCCAATAA
CTTAACTAACACAATTAACACCACAAACGAAACACCAACTAACCCTCCAA
CGTACACAATACCATTGATATTACAAAATACAACAAAGCTTACACCTATT
ACTATTACTAACGAGAAAATAACAACCAAATCTATGACAACTCCAATAAC
GACAACCAACAACACAACAACTaaaaccacaacaacaacagcaacaacaa
ctaCTACTACAACCCCCACAACGACTACAACTATGAGACCTTGTAGAAGT
AATTCTTTTTATGAGCAGCCATAAAATAAAGGTCCCTCTACTTTGGGGAA
TTTCTTTAACTAGTTTGGGAAGGATTTTGTGAAGCTTGGATCTGTTTGAT
TTGTAAATTAGATCATCACCAAGAAGCCCCTTTAACCACACTACGCCTTT
CTTTGGGAGTCTATTTATTCTGGTTTTTAAGATTCAATTTGTTAAAACTT
CTAGGAATGAAATTTATCAATCGAATACATCAAGCCAATCCGGAAGTCTT
GACGTTGGTTGGATCCACTTTTGTCATCGATTGTAGCGTAGACCACACTG
GTGGTCCTGAACCATCTGTCTATTGGTATAAGGATGATATTCCTCTACAA
GAAAATAGCTTTAGGTAATAAATCTTTAAACATAAGAGCTTCAACTCACA
AGAACATTTTACAATGATATTACTGTTTTAATCAGTTAAAGTAATAGAAC
TTACAATTTCGAAAGTCTGTTTTAATAGCAGATGTGACCTTTTAAAGTTT
TATATCTTTAATATCTCCTGGCCTCTTCAAGGATTGGCACAATCGATTAA
TAATTCAAATTGTTGGGGTAACAAATTATATAACCACGCCCGTTACACTA
CATTATCGTTCCTTTCCTATTCCTTTACTATTTTCCTTTAGAACCTTTGA
CGAACATAGATTAAACAAGACATTCAGACTTCGTTTAGAGAATGTGGATA
TTCCAGACAATGGCAAATATAAATGCACTGTCGATAATGTTTGCAGCAAG
TCAATCACCAATACTGTTAGTATTATTGTTAGAGGTATGTCTGCCTTTTG
AAGTATTTGTTTCTACAGAAATTTTGGTCTGGAAGTTCAGTTTGTTTTTC
AAGTTAGTTTGACTTACATTATTTTATATATTGTATCACATCAGCACAGC
ATATGTATGAAGAAATTAACCAACAACGATTTTTGAAATTGACAACTTAT
TATTTGCGTTCGATAGTTTCAAAGAAAATCGAACTGTATTCCAGAACACA
AATATCTGCTTATAGCGGTTTTTAAGGCTTCGTGTGGTTGCAATATTaag
atttgttttcttttccttcCCTAGAACAAAGGAGTGATGTGCCGATAATC
TCAACATTTGAACCAGTGAACGCTACAAGGCTCGTGGGTGAGGAGTTGCA
ATTGACTTGTGGCGCTGATTTAGAAGATGGTAATATTGTTTTTTGTATTa
tgttcaaaaattgaaatatttcagtATGTTAGACAACTAAAATTTAAGAG
AAAGTTGTCTAtggtgaaaaaaattgaatgtcaTTATTATTATCCTCTTA
ACAACCCTTAGAGGCGTAGTCGGTTTTTGATGGGTACTGGTAATTCCGTT
TTCAAAGAATGATGAAGTCAAGTAAGGATGAAAGATTTCAAGCTAATTAA
GAAAATGttatgaataaatattttattaaagAATTCATTACTACCaattc
acaggaaaaaattttcgatttccaaggttggaaatttcaagttttcttag
ttggaaaaaagataaaatccaatggaaaatccaNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNgtaatcgctcaaatttccaacc
ttcaattataaaaccaaaatttccaacccaaaaatattgaatttccaacc
ttggaaatcgaaatttttttcctgtgattaCTGCGAAGAAGCTTAAAAGA
ACATCGTGTCAACGCCTGGAATCCTCtacaatattgaaaaaataagactG
GAACATCTTTTCATTTCCACAGGAGAGTTTACACCGTTTATTAAATGGGT
CCGTAAAACGAGTGAGAACGTGACATCCCATCTTAACCACACCTATAACA
ACACAACCTCTACAACCACCACCACAACGCAACCACCTTTTGGTATCATT
CAAAAGAAATCAGACAAAATTCAGAATGTCCAAAATGTCCCAAAGATGAA
TACTGTATCTTATATAGAAGATGGTATGTTCTTTGTTTTCGTATTCGCTC
TTACGTAACCTTAGGAGTAGTTGAATATCCGACTAATAATTCAacaaagt
gctctataccatATTGGTAGAGCAGTATACCATACCAGTCAAGAATAGAG
TTTCATACCTtttcaggcagtcttcagtcagaATCAAAGGTTGGCTGATA
TAACCTTAgtagtaaataaaaaaagatcaaaaaatatttagcgGCCATTT
TCTTTTTAGATGTCCGATACACAGTAACAGATCTGAAGTTTGAACGCACT
GCATCAAGTACGTTATCGTTAGAGGATCTTAAAGAAGAAGATAGTGGTGT
CTACACGTGTGTCATGTCCAATCTAAAAGGTGTTGTGCGGAAATCATCTC
ATGTCACCATTAACCCTAGTAAGTACGCGTTCTTACAGATTGAAGAGCTA
TTTCTAATGTAAGTTTTCAAGGGGAAAATAAGAATTCACTATCCTAGGAT
GGCGGAAGAGGGCAACGTTACGGTTTATGCATTTGCTAAATTCCTAAACT
TCCCCTTTTTGacttatacatgtttttttcataagcataacGTGTATAAG
CATACCAAGAcctgaatttgtctaaaaaataagcatattacaagcataTT
TCTGAGCTTGCTTTTGAT

Coding sequence (CDS) from alignment at scaffold_159:31591..38158+

>TCONS_00049422 ID=TCONS_00049422|Name=TCONS_00049422|organism=Clytia hemisphaerica|type=CDS|length=9168bp|location=Sequence derived from alignment at scaffold_159:31591..38158+ (Clytia hemisphaerica)
GAAAGTCTAGAAAGAGaaatggATTACAAAGTTGCTTCTTATTTGCTGTT
ATCCTGCATACTCATAAGTCATGTACATTCCAATAACTTAACTAACACAA
TTAACACCACAAACGAAACACCAACTAACCCTCCAACGTACACAATACCA
TTGATATTACAAAATACAACAAAGCTTACACCTATTACTATTACTAACGA
GAAAATAACAACCAAATCTATGACAACTCCAATAACGACAACCAACAACA
CAACAACTaaaaccacaacaacaacagcaacaacaactaCTACTACAACC
CCCACAACGACTACAACTATGAGACCTTGTAGAAGAATGAAATTTATCAA
TCGAATACATCAAGCCAATCCGGAAGTCTTGACGTTGGTTGGATCCACTT
TTGTCATCGATTGTAGCGTAGACCACACTGGTGGTCCTGAACCATCTGTC
TATTGGTATAAGGATGATATTCCTCTACAAGAAAATAGCTTTAGAACCTT
TGACGAACATAGATTAAACAAGACATTCAGACTTCGTTTAGAGAATGTGG
ATATTCCAGACAATGGCAAATATAAATGCACTGTCGATAATGTTTGCAGC
AAGTCAATCACCAATACTGTTAGTATTATTGTTAGAGAACAAAGGAGTGA
TGTGCCGATAATCTCAACATTTGAACCAGTGAACGCTACAAGGCTCGTGG
GTGAGGAGTTGCAATTGACTTGTGGCGCTGATTTAGAAGATGGAGAGTTT
ACACCGTTTATTAAATGGGTCCGTAAAACGAGTGAGAACGTGACATCCCA
TCTTAACCACACCTATAACAACACAACCTCTACAACCACCACCACAACGC
AACCACCTTTTGGTATCATTCAAAAGAAATCAGACAAAATTCAGAATGTC
CAAAATGTCCCAAAGATGAATACTGTATCTTATATAGAAGATGATGTCCG
ATACACAGTAACAGATCTGAAGTTTGAACGCACTGCATCAAGTACGTTAT
CGTTAGAGGATCTTAAAGAAGAAGATAGTGGTGTCTACACGTGTGTCATG
TCCAATCTAAAAGGTGTTGTGCGGAAATCATCTCATGTCACCATTAACCC
TAGTAAGTACGCGTTCTTACAGATTGAAGAGCTATTTCTAATGTAAGAAA
GTCTAGAAAGAGaaatggATTACAAAGTTGCTTCTTATTTGCTGTTATCC
TGCATACTCATAAGTCATGTACATTCCAATAACTTAACTAACACAATTAA
CACCACAAACGAAACACCAACTAACCCTCCAACGTACACAATACCATTGA
TATTACAAAATACAACAAAGCTTACACCTATTACTATTACTAACGAGAAA
ATAACAACCAAATCTATGACAACTCCAATAACGACAACCAACAACACAAC
AACTaaaaccacaacaacaacagcaacaacaactaCTACTACAACCCCCA
CAACGACTACAACTATGAGACCTTGTAGAAGAATGAAATTTATCAATCGA
ATACATCAAGCCAATCCGGAAGTCTTGACGTTGGTTGGATCCACTTTTGT
CATCGATTGTAGCGTAGACCACACTGGTGGTCCTGAACCATCTGTCTATT
GGTATAAGGATGATATTCCTCTACAAGAAAATAGCTTTAGAACCTTTGAC
GAACATAGATTAAACAAGACATTCAGACTTCGTTTAGAGAATGTGGATAT
TCCAGACAATGGCAAATATAAATGCACTGTCGATAATGTTTGCAGCAAGT
CAATCACCAATACTGTTAGTATTATTGTTAGAGAACAAAGGAGTGATGTG
CCGATAATCTCAACATTTGAACCAGTGAACGCTACAAGGCTCGTGGGTGA
GGAGTTGCAATTGACTTGTGGCGCTGATTTAGAAGATGGAGAGTTTACAC
CGTTTATTAAATGGGTCCGTAAAACGAGTGAGAACGTGACATCCCATCTT
AACCACACCTATAACAACACAACCTCTACAACCACCACCACAACGCAACC
ACCTTTTGGTATCATTCAAAAGAAATCAGACAAAATTCAGAATGTCCAAA
ATGTCCCAAAGATGAATACTGTATCTTATATAGAAGATGATGTCCGATAC
ACAGTAACAGATCTGAAGTTTGAACGCACTGCATCAAGTACGTTATCGTT
AGAGGATCTTAAAGAAGAAGATAGTGGTGTCTACACGTGTGTCATGTCCA
ATCTAAAAGGTGTTGTGCGGAAATCATCTCATGTCACCATTAACCCTAGT
AAGTACGCGTTCTTACAGATTGAAGAGCTATTTCTAATGTAAGAAAGTCT
AGAAAGAGaaatggATTACAAAGTTGCTTCTTATTTGCTGTTATCCTGCA
TACTCATAAGTCATGTACATTCCAATAACTTAACTAACACAATTAACACC
ACAAACGAAACACCAACTAACCCTCCAACGTACACAATACCATTGATATT
ACAAAATACAACAAAGCTTACACCTATTACTATTACTAACGAGAAAATAA
CAACCAAATCTATGACAACTCCAATAACGACAACCAACAACACAACAACT
aaaaccacaacaacaacagcaacaacaactaCTACTACAACCCCCACAAC
GACTACAACTATGAGACCTTGTAGAAGAATGAAATTTATCAATCGAATAC
ATCAAGCCAATCCGGAAGTCTTGACGTTGGTTGGATCCACTTTTGTCATC
GATTGTAGCGTAGACCACACTGGTGGTCCTGAACCATCTGTCTATTGGTA
TAAGGATGATATTCCTCTACAAGAAAATAGCTTTAGAACCTTTGACGAAC
ATAGATTAAACAAGACATTCAGACTTCGTTTAGAGAATGTGGATATTCCA
GACAATGGCAAATATAAATGCACTGTCGATAATGTTTGCAGCAAGTCAAT
CACCAATACTGTTAGTATTATTGTTAGAGAACAAAGGAGTGATGTGCCGA
TAATCTCAACATTTGAACCAGTGAACGCTACAAGGCTCGTGGGTGAGGAG
TTGCAATTGACTTGTGGCGCTGATTTAGAAGATGGAGAGTTTACACCGTT
TATTAAATGGGTCCGTAAAACGAGTGAGAACGTGACATCCCATCTTAACC
ACACCTATAACAACACAACCTCTACAACCACCACCACAACGCAACCACCT
TTTGGTATCATTCAAAAGAAATCAGACAAAATTCAGAATGTCCAAAATGT
CCCAAAGATGAATACTGTATCTTATATAGAAGATGATGTCCGATACACAG
TAACAGATCTGAAGTTTGAACGCACTGCATCAAGTACGTTATCGTTAGAG
GATCTTAAAGAAGAAGATAGTGGTGTCTACACGTGTGTCATGTCCAATCT
AAAAGGTGTTGTGCGGAAATCATCTCATGTCACCATTAACCCTAGTAAGT
ACGCGTTCTTACAGATTGAAGAGCTATTTCTAATGTAAGAAAGTCTAGAA
AGAGaaatggATTACAAAGTTGCTTCTTATTTGCTGTTATCCTGCATACT
CATAAGTCATGTACATTCCAATAACTTAACTAACACAATTAACACCACAA
ACGAAACACCAACTAACCCTCCAACGTACACAATACCATTGATATTACAA
AATACAACAAAGCTTACACCTATTACTATTACTAACGAGAAAATAACAAC
CAAATCTATGACAACTCCAATAACGACAACCAACAACACAACAACTaaaa
ccacaacaacaacagcaacaacaactaCTACTACAACCCCCACAACGACT
ACAACTATGAGACCTTGTAGAAGAATGAAATTTATCAATCGAATACATCA
AGCCAATCCGGAAGTCTTGACGTTGGTTGGATCCACTTTTGTCATCGATT
GTAGCGTAGACCACACTGGTGGTCCTGAACCATCTGTCTATTGGTATAAG
GATGATATTCCTCTACAAGAAAATAGCTTTAGAACCTTTGACGAACATAG
ATTAAACAAGACATTCAGACTTCGTTTAGAGAATGTGGATATTCCAGACA
ATGGCAAATATAAATGCACTGTCGATAATGTTTGCAGCAAGTCAATCACC
AATACTGTTAGTATTATTGTTAGAGAACAAAGGAGTGATGTGCCGATAAT
CTCAACATTTGAACCAGTGAACGCTACAAGGCTCGTGGGTGAGGAGTTGC
AATTGACTTGTGGCGCTGATTTAGAAGATGGAGAGTTTACACCGTTTATT
AAATGGGTCCGTAAAACGAGTGAGAACGTGACATCCCATCTTAACCACAC
CTATAACAACACAACCTCTACAACCACCACCACAACGCAACCACCTTTTG
GTATCATTCAAAAGAAATCAGACAAAATTCAGAATGTCCAAAATGTCCCA
AAGATGAATACTGTATCTTATATAGAAGATGATGTCCGATACACAGTAAC
AGATCTGAAGTTTGAACGCACTGCATCAAGTACGTTATCGTTAGAGGATC
TTAAAGAAGAAGATAGTGGTGTCTACACGTGTGTCATGTCCAATCTAAAA
GGTGTTGTGCGGAAATCATCTCATGTCACCATTAACCCTAGTAAGTACGC
GTTCTTACAGATTGAAGAGCTATTTCTAATGTAAGAAAGTCTAGAAAGAG
aaatggATTACAAAGTTGCTTCTTATTTGCTGTTATCCTGCATACTCATA
AGTCATGTACATTCCAATAACTTAACTAACACAATTAACACCACAAACGA
AACACCAACTAACCCTCCAACGTACACAATACCATTGATATTACAAAATA
CAACAAAGCTTACACCTATTACTATTACTAACGAGAAAATAACAACCAAA
TCTATGACAACTCCAATAACGACAACCAACAACACAACAACTaaaaccac
aacaacaacagcaacaacaactaCTACTACAACCCCCACAACGACTACAA
CTATGAGACCTTGTAGAAGAATGAAATTTATCAATCGAATACATCAAGCC
AATCCGGAAGTCTTGACGTTGGTTGGATCCACTTTTGTCATCGATTGTAG
CGTAGACCACACTGGTGGTCCTGAACCATCTGTCTATTGGTATAAGGATG
ATATTCCTCTACAAGAAAATAGCTTTAGAACCTTTGACGAACATAGATTA
AACAAGACATTCAGACTTCGTTTAGAGAATGTGGATATTCCAGACAATGG
CAAATATAAATGCACTGTCGATAATGTTTGCAGCAAGTCAATCACCAATA
CTGTTAGTATTATTGTTAGAGAACAAAGGAGTGATGTGCCGATAATCTCA
ACATTTGAACCAGTGAACGCTACAAGGCTCGTGGGTGAGGAGTTGCAATT
GACTTGTGGCGCTGATTTAGAAGATGGAGAGTTTACACCGTTTATTAAAT
GGGTCCGTAAAACGAGTGAGAACGTGACATCCCATCTTAACCACACCTAT
AACAACACAACCTCTACAACCACCACCACAACGCAACCACCTTTTGGTAT
CATTCAAAAGAAATCAGACAAAATTCAGAATGTCCAAAATGTCCCAAAGA
TGAATACTGTATCTTATATAGAAGATGATGTCCGATACACAGTAACAGAT
CTGAAGTTTGAACGCACTGCATCAAGTACGTTATCGTTAGAGGATCTTAA
AGAAGAAGATAGTGGTGTCTACACGTGTGTCATGTCCAATCTAAAAGGTG
TTGTGCGGAAATCATCTCATGTCACCATTAACCCTAGTAAGTACGCGTTC
TTACAGATTGAAGAGCTATTTCTAATGTAAGAAAGTCTAGAAAGAGaaat
ggATTACAAAGTTGCTTCTTATTTGCTGTTATCCTGCATACTCATAAGTC
ATGTACATTCCAATAACTTAACTAACACAATTAACACCACAAACGAAACA
CCAACTAACCCTCCAACGTACACAATACCATTGATATTACAAAATACAAC
AAAGCTTACACCTATTACTATTACTAACGAGAAAATAACAACCAAATCTA
TGACAACTCCAATAACGACAACCAACAACACAACAACTaaaaccacaaca
acaacagcaacaacaactaCTACTACAACCCCCACAACGACTACAACTAT
GAGACCTTGTAGAAGAATGAAATTTATCAATCGAATACATCAAGCCAATC
CGGAAGTCTTGACGTTGGTTGGATCCACTTTTGTCATCGATTGTAGCGTA
GACCACACTGGTGGTCCTGAACCATCTGTCTATTGGTATAAGGATGATAT
TCCTCTACAAGAAAATAGCTTTAGAACCTTTGACGAACATAGATTAAACA
AGACATTCAGACTTCGTTTAGAGAATGTGGATATTCCAGACAATGGCAAA
TATAAATGCACTGTCGATAATGTTTGCAGCAAGTCAATCACCAATACTGT
TAGTATTATTGTTAGAGAACAAAGGAGTGATGTGCCGATAATCTCAACAT
TTGAACCAGTGAACGCTACAAGGCTCGTGGGTGAGGAGTTGCAATTGACT
TGTGGCGCTGATTTAGAAGATGGAGAGTTTACACCGTTTATTAAATGGGT
CCGTAAAACGAGTGAGAACGTGACATCCCATCTTAACCACACCTATAACA
ACACAACCTCTACAACCACCACCACAACGCAACCACCTTTTGGTATCATT
CAAAAGAAATCAGACAAAATTCAGAATGTCCAAAATGTCCCAAAGATGAA
TACTGTATCTTATATAGAAGATGATGTCCGATACACAGTAACAGATCTGA
AGTTTGAACGCACTGCATCAAGTACGTTATCGTTAGAGGATCTTAAAGAA
GAAGATAGTGGTGTCTACACGTGTGTCATGTCCAATCTAAAAGGTGTTGT
GCGGAAATCATCTCATGTCACCATTAACCCTAGTAAGTACGCGTTCTTAC
AGATTGAAGAGCTATTTCTAATGTAAGAAAGTCTAGAAAGAGaaatggAT
TACAAAGTTGCTTCTTATTTGCTGTTATCCTGCATACTCATAAGTCATGT
ACATTCCAATAACTTAACTAACACAATTAACACCACAAACGAAACACCAA
CTAACCCTCCAACGTACACAATACCATTGATATTACAAAATACAACAAAG
CTTACACCTATTACTATTACTAACGAGAAAATAACAACCAAATCTATGAC
AACTCCAATAACGACAACCAACAACACAACAACTaaaaccacaacaacaa
cagcaacaacaactaCTACTACAACCCCCACAACGACTACAACTATGAGA
CCTTGTAGAAGAATGAAATTTATCAATCGAATACATCAAGCCAATCCGGA
AGTCTTGACGTTGGTTGGATCCACTTTTGTCATCGATTGTAGCGTAGACC
ACACTGGTGGTCCTGAACCATCTGTCTATTGGTATAAGGATGATATTCCT
CTACAAGAAAATAGCTTTAGAACCTTTGACGAACATAGATTAAACAAGAC
ATTCAGACTTCGTTTAGAGAATGTGGATATTCCAGACAATGGCAAATATA
AATGCACTGTCGATAATGTTTGCAGCAAGTCAATCACCAATACTGTTAGT
ATTATTGTTAGAGAACAAAGGAGTGATGTGCCGATAATCTCAACATTTGA
ACCAGTGAACGCTACAAGGCTCGTGGGTGAGGAGTTGCAATTGACTTGTG
GCGCTGATTTAGAAGATGGAGAGTTTACACCGTTTATTAAATGGGTCCGT
AAAACGAGTGAGAACGTGACATCCCATCTTAACCACACCTATAACAACAC
AACCTCTACAACCACCACCACAACGCAACCACCTTTTGGTATCATTCAAA
AGAAATCAGACAAAATTCAGAATGTCCAAAATGTCCCAAAGATGAATACT
GTATCTTATATAGAAGATGATGTCCGATACACAGTAACAGATCTGAAGTT
TGAACGCACTGCATCAAGTACGTTATCGTTAGAGGATCTTAAAGAAGAAG
ATAGTGGTGTCTACACGTGTGTCATGTCCAATCTAAAAGGTGTTGTGCGG
AAATCATCTCATGTCACCATTAACCCTAGTAAGTACGCGTTCTTACAGAT
TGAAGAGCTATTTCTAATGTAAGAAAGTCTAGAAAGAGaaatggATTACA
AAGTTGCTTCTTATTTGCTGTTATCCTGCATACTCATAAGTCATGTACAT
TCCAATAACTTAACTAACACAATTAACACCACAAACGAAACACCAACTAA
CCCTCCAACGTACACAATACCATTGATATTACAAAATACAACAAAGCTTA
CACCTATTACTATTACTAACGAGAAAATAACAACCAAATCTATGACAACT
CCAATAACGACAACCAACAACACAACAACTaaaaccacaacaacaacagc
aacaacaactaCTACTACAACCCCCACAACGACTACAACTATGAGACCTT
GTAGAAGAATGAAATTTATCAATCGAATACATCAAGCCAATCCGGAAGTC
TTGACGTTGGTTGGATCCACTTTTGTCATCGATTGTAGCGTAGACCACAC
TGGTGGTCCTGAACCATCTGTCTATTGGTATAAGGATGATATTCCTCTAC
AAGAAAATAGCTTTAGAACCTTTGACGAACATAGATTAAACAAGACATTC
AGACTTCGTTTAGAGAATGTGGATATTCCAGACAATGGCAAATATAAATG
CACTGTCGATAATGTTTGCAGCAAGTCAATCACCAATACTGTTAGTATTA
TTGTTAGAGAACAAAGGAGTGATGTGCCGATAATCTCAACATTTGAACCA
GTGAACGCTACAAGGCTCGTGGGTGAGGAGTTGCAATTGACTTGTGGCGC
TGATTTAGAAGATGGAGAGTTTACACCGTTTATTAAATGGGTCCGTAAAA
CGAGTGAGAACGTGACATCCCATCTTAACCACACCTATAACAACACAACC
TCTACAACCACCACCACAACGCAACCACCTTTTGGTATCATTCAAAAGAA
ATCAGACAAAATTCAGAATGTCCAAAATGTCCCAAAGATGAATACTGTAT
CTTATATAGAAGATGATGTCCGATACACAGTAACAGATCTGAAGTTTGAA
CGCACTGCATCAAGTACGTTATCGTTAGAGGATCTTAAAGAAGAAGATAG
TGGTGTCTACACGTGTGTCATGTCCAATCTAAAAGGTGTTGTGCGGAAAT
CATCTCATGTCACCATTAACCCTAGTAAGTACGCGTTCTTACAGATTGAA
GAGCTATTTCTAATGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031372XLOC_031372Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049422-exon-scaffold_159-1491911889:31591..31607TCONS_00049422-exon-scaffold_159-1491911889:31591..31607Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1510915933:31591..31607TCONS_00049422-exon-scaffold_159-1510915933:31591..31607Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1575043694:31591..31607TCONS_00049422-exon-scaffold_159-1575043694:31591..31607Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1491911889:33467..33505TCONS_00049422-exon-scaffold_159-1491911889:33467..33505Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1510915933:33467..33505TCONS_00049422-exon-scaffold_159-1510915933:33467..33505Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1575043694:33467..33505TCONS_00049422-exon-scaffold_159-1575043694:33467..33505Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1491911889:34060..34338TCONS_00049422-exon-scaffold_159-1491911889:34060..34338Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1510915933:34060..34338TCONS_00049422-exon-scaffold_159-1510915933:34060..34338Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1575043694:34060..34338TCONS_00049422-exon-scaffold_159-1575043694:34060..34338Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1491911889:34545..34704TCONS_00049422-exon-scaffold_159-1491911889:34545..34704Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1510915933:34545..34704TCONS_00049422-exon-scaffold_159-1510915933:34545..34704Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1575043694:34545..34704TCONS_00049422-exon-scaffold_159-1575043694:34545..34704Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1491911889:34982..35124TCONS_00049422-exon-scaffold_159-1491911889:34982..35124Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1510915933:34982..35124TCONS_00049422-exon-scaffold_159-1510915933:34982..35124Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1575043694:34982..35124TCONS_00049422-exon-scaffold_159-1575043694:34982..35124Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1491911889:35415..35519TCONS_00049422-exon-scaffold_159-1491911889:35415..35519Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1510915933:35415..35519TCONS_00049422-exon-scaffold_159-1510915933:35415..35519Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1575043694:35415..35519TCONS_00049422-exon-scaffold_159-1575043694:35415..35519Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1491911889:37313..37513TCONS_00049422-exon-scaffold_159-1491911889:37313..37513Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1510915933:37313..37513TCONS_00049422-exon-scaffold_159-1510915933:37313..37513Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1575043694:37313..37513TCONS_00049422-exon-scaffold_159-1575043694:37313..37513Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1491911889:37750..38158TCONS_00049422-exon-scaffold_159-1491911889:37750..38158Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1510915933:37750..38158TCONS_00049422-exon-scaffold_159-1510915933:37750..38158Clytia hemisphaericaexon
TCONS_00049422-exon-scaffold_159-1575043694:37750..38158TCONS_00049422-exon-scaffold_159-1575043694:37750..38158Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049422-proteinTCONS_00049422-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_159supercontigscaffold_159:31591..38158 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.3415	20.0568	6.61507	4.8463	15.0496	12.3858	13.0328	12.2274	11.8346	13.1814	10.4294	9.64772	9.60299	6.7601	7.56924	7.84632	15.6929	17.4339	10.1713	11.9379	10.8291	10.8714	15.606	13.7632	7.69521	9.1027	16.7363	13.7253	5.02759	5.92661
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003598Ig_sub2
IPR003599Ig_sub
IPR013783Ig-like_fold
IPR013098Ig_I-set
IPR007110Ig-like_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049422 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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