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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052960 ID=TCONS_00052960|Name=TCONS_00052960|organism=Clytia hemisphaerica|type=transcript|length=906bp
CGGGGCGATACCGCGCCACGCCCGCCTTCCGGCCCTTTCATCACCCGGAC
CGGGCGGAAATTGCTTTTAAAAGAGCAGGGCGCTCAGCAACataatgtaa
acaaaacaaaatggcgaccAAAAAGGAAGCAGCTCCTGTGAATTATGTCC
ATCAAACAGCAATAAACTTGGAGACCATTAAGAAAGAGCagaagaaccag
aaaatttaCACAAACTACAGTATAAACCCTTTCAAGAAAAtgTATACATT
GTCAGGAAAACCAAATTCATTGCACGATTCTGCTGATGGTGAAGAAGATG
ATGATTTTTTGCAAGTAATCAAGAGAGCCAATCAAACGCCAGTGGAGAAA
TTTGAATTCCCACAAACAGAAGCACAAGAAATTGGCTGGTGCACAAAACC
ATTGATTGTTCAACCGAAAGACGATGCACGGTTACACCATCCCAAGAAAC
ATTCTGAAATCACCAAATTCATGGATGCTTACTGGAGACAAAAAGAACAA
TCTGAAAatctaaattaatttttttttctgatttttaaattatactcctt
ttattattattatttttttaaattgtatatgattttatttttgtagtgat
aattatttttttatgaggTATTTTAATGAATATGTAGTCAAACTATGGTG
TGTATGTAAGCTTTTATTTGTTCTTAATAATGTCCCACCAattgtatctt
tttttttaattctcagctgaaagtttggaatttttcaattttataaatta
tatgtgtataaaaaaatttacagaGCTCCTGCTCGACAATGACAGTACAT
CATCTTCCTTAGGGAAAActattttatgaaataaatttcactattatttt
gaaaacattttgatgATTAACTTTTTTCCTCCAAAGTCAattagatctta
tcggag Run BLAST on NCBI protein sequence of TCONS_00052960-protein >TCONS_00052960-protein ID=TCONS_00052960-protein|Name=TCONS_00052960-protein|organism=Clytia hemisphaerica|type=polypeptide|length=135bp
MATKKEAAPVNYVHQTAINLETIKKEQKNQKIYTNYSINPFKKMYTLSGK
PNSLHDSADGEEDDDFLQVIKRANQTPVEKFEFPQTEAQEIGWCTKPLIV
QPKDDARLHHPKKHSEITKFMDAYWRQKEQSENLN Run BLAST on NCBI transcript from alignment at scaffold_222:213997..221802- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052960 ID=TCONS_00052960|Name=TCONS_00052960|organism=Clytia hemisphaerica|type=transcript|length=7806bp|location=Sequence derived from alignment at scaffold_222:213997..221802- (Clytia hemisphaerica)
CGGGGCGATACCGCGCCACGCCCGCCTTCCGGCCCTTTCATCACCCGGAC
CGGGCGGAAATTGCTTTTAAAAGAGCAGGGCGCTCAGCAACATAATGTAA
ACAAAACAAAATGGCGACCAAAAAGGAAGCAGCTCCTGTGAATTATGTCC
ATCAAACAGCAATAAACTTGGAGACCATTAAGAAAGAGCAGAAGAACCAG
AAAATTTACACAAACTACAGTATAAACCCTTTCAAGAAAAGTAAGTTCTT
AAAATATATACAAACACTTTCAAAACAAAAGTTCAATATTCAAAGAATTT
TGACTAAAAAATTGTGTCTGTGGTTTTGTTAATATCCAATGTTTTTGATA
CAAAAAAGAATGCCAGGATGATTTCATACCTTAAATACAGTATTTCTTCA
AAATGAACGTCTCCCTTTTTTGAAACGCCCCCTCAAATATTAATGCCCCT
CCTTTTCTTTGACTCAAAGTTTGTGAGGAATAATAAGAAGTTTTTAAAGA
ACAACAGCCCCTCAAATTCAAATAAATACCTCTCATTTTTCTAAATTGAA
AACTTGTGCTTTTGAAAGCTTTTTGTGAGTTAATTCATTCAGTGCGCATG
AAAGTTCATTTTTAATAAAATCAGTTACTGTAGCTTGAAAACTGCCGCAA
ATTTTACGCTGATAATTTTCAAAAAACCGTACCAAGGCGAAAAATAACCG
CACCTCGCAAGATTTTTGGATGAACAGACAAAGTCACTTTCTGTTTTTGA
AGAAAGACCTAACTCTTCATACAGAAATTACGGGAAACGAATATTTGGAC
TTTGTACCCTACAGTATGCTGCACGCAAGCACTTAAGCCAAAGTCCCCCA
AAAGCGGGACAAAAATCTGTTATTTTCATCTGATCATTTCCATGGAAGTT
GTTGGAATATTTACAAGACTCTTGACAGAAAATACTTTGTTTTATTGTCA
ATGATGCCAGTGCCGTTATTAATTTTGTTAGATCTGACATATAGTCAACT
CAGGTAATCGTTACGCACTCCTAATTCTTACGCACTTTTTGAATCACCAA
TATTTCATGATATACTTGGTTTCTAGCCTTAAAGTAAAATTATCATGAAA
GCCAAAACATTTCCCTACCTTTTGTACCAATAATCTGTTTCTGTTTTGAC
TTCCCGCTCGCCAAAATTTGCTTCAAAGAAAATGCGCTGTGGCGATACCA
TTTTGATATTTTAGAAGGATGAAGTAACTTTTGAGCTGAGGAGATCTAGG
TACAAGATAGCGCGCAAATGGTTGTTGCTAAGAAGCAGCCTATTCAAGTA
CGTTTTACCCCATCAAATGTTTTTTCTTGAATATTCCGTGATAAATAACA
AGAGCCGCGGATCAATTAGGTGCCTAAAATTTACCAGGGTAGCCCAATCA
TTATGCACATTTTCAAGTTACTATTCAAGCTTAAAGTCGCCAATACATTG
TTTCAAGTAATATCTTTTCAACACAGTTTAATAGCCAATTGGTTTTCTTA
ACAGTTTTCCGATCCACGGAATCGATANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNGAGCAACTAGCCTTTAATCGCAAGAATT
AGCATGCGCGGAATCGATAGGGAAAAATGCGGAATAATTGCAGATTTGGC
ACCTAATCATTACGCAGTTGAATAAAGTGCGTAACGATTACCTGAGTTGA
CTATATTGATGTTTGTAAGTTCACTTTATAGTTTTGATTCCCATTGAAGA
ATCATATTTTGGTTTTCATGTTATTAGTTGCTGTTTTAGAGCTTTAGAGC
TTTAGAGCTAGCCTGTTATAAATGTTTTCAAATATGTGAAAACATTTATA
ACAGAAAAGTGAAAAAGAAATTGGCTAATAGTGAGTAAAATTCACAAAAT
TGACCAAAACGTCAAAAAGCTTCCAGATATGGCAGTCCGAAAAAGATTCC
GTATCCGGATGTTGATTAGACTGTCTAGGAGGGGCGTTTATTTGAAACAA
GTAGCTGTAAGGAAGTATAATATAAGAAAAAACTTAGATATACGATGATT
AATTTTACAGTACTCTTTTAGTATTTGGAACTGATTACTGATTACAGTAT
ATTATTGTACTCAAATAATAAGGGGTCACTCAGGGTCAGGTTGGAAAGAC
CGATGTTGTTTCAAAACACGTATGATTGAACATGGGAAACGAGTGGACCA
ACCCATGAATCATCATTTAAATAACTGTAATAATTTTCACGATTTGACTG
ACATGTTTAATCTCGCACAATTGTTTGGAGAATCACATGGGATTAACCAT
AAAGAACACATTTTGAACGCTGTTTTGAATAAATTGTAAAATCTTAGATT
TGAATGATAATTGGTCACAATTGGCCTTTTTAGAAGCATTTTACATAAAA
AAACTAATGCCAAAGATTAATGACGGGTTGAAAGCTTCAAAAGAACTTCA
ATTGTTTGGATAGGCCCCTGACAATTGACACTCTTTTGTTCATTTCATTC
AGTCAATTTTTTAGCTTTTATCAATTTTATTTCCCTTGTACATTTTATAA
CTCACTGTGACGTTTTTTTTAATTATCATTTTACTGCTGTACAGATTTTT
AGAATAAAAGTAGATTTTTGGAATGTATTTAGTTTATGGTTGACAATGAT
GAGATAGAAGTCATAGAAAATATTCCAAGTTATGAACACTTTCTTGTTGT
TTTTTATTTAAAGACTAAGAAGGATGCTGATCTTCGGGTTATGTTTTTTC
TTATATACAAGACACCTTTTAGAAACCATTTTGACCCTTTCCTGGCCTTT
CATAGTCTTAAAATGGGCAAAAAATACTCATTTTTCGCTTTAGTGCGAAT
CAAAGACCCCCCTGGGGAATGCTGGATTGTTGACCTAGGAGGTTGAAAAT
TGCGCAAAATGTCTTACAATAGATTAAATTTTCACAAAAAAATACTACAC
TTTGAATTTTTTGACTTTGCCATTTGACGATCTACCCTACGCACTGTTGC
AAGTTACCCAACTTTGCAGTAACATTTGGCATGAAAAATCAATGTTTCTG
GATTTTACAATTAAAACGTCAACAACTTTTGCCTGGGGCGTTTATTGAAA
GTAATACAGTATTTATGATCACAAAAAGACTCTTCTGAATAAGAAAAAGA
AAGAAAGAAATTTTCAGAACGGTGGAAGATTAGAAGAACTTTTTCTGCCC
ACCCCCTTGCCCTGCCTCATCGCCCGTTGGTAAGTACAGATATGACTGAA
TCCCACACAAAGCTGTGCAATAATGATGTGAGTAGAACTCAAGTATTTTC
TATAAAGATTTTTATAAATCTCAAGGTTATTTTCCAGACCCGATCAATCA
AACTTGTCAAACCAATCAAACAACCGAACTGATCAAACTCCATCGAACTA
TTAAAGTTTGAGTAAAAAAAATTAATCTAACTCAATTTTGAGTGTTCTAT
CAAGTTTGGTCAATGGGTTGCGGTTTGATCAGTTTGATAATCCAATTTTG
TTTGACAAGTTTGTTGTGCTCCGCCGAATATCAGCTTCTGTTGAAAGCCA
AATTAGAAATTTAAATTGGGAAATTATTTCTGACAGATTGAACACTTATC
CTGTATCCTTTCAACACCATCACCAGGGCGGTACCTAGCAGTTTGCCATG
TGGCTGTGAGCAAAACCTTGACAGAGGGGCTACAGACTTTGTTCATGAGA
GACAAAACATCTAGGTACACAATAATCCTTAAGTCTGGGAACCGTTGAAA
TGGTAGTAGCTGCGTGTCGCGATAAAAAGTTTTGCAAGTGAGGGAAGAGG
TGAGGATTGGAAATCATTATAAACTAATTGAACTTTTTACTGGAGGAAGT
AATCAAACTCCTATTAGCTTCAAAAATTGTGAGTGTGAATGATACAATAT
TTCATTTTTCATTTTAGTGTATACATTGTCAGGAAAACCAAATTCATTGC
ACGATTCTGCTGATGGTGAAGAAGATGGTCAGTTCCTTTAGTTATATTTT
GTATTTTGACTTTAACCATTAAGTTCATAGATAAAAAAAGCTTTGACAAC
TAAATACTTAAAATAATGTGAATCTCCAAGCCAAAATATGATAAAGTACC
TGGAAACTGAATATTCACTAAAAAAATGGTTTGGTTAATACATGTGCGTT
TTTTAATAATTCAATAACCAGTCCCAGAAAAACCTTGATCTACTGATTGA
CTTCTTTGTTTAAGAAAAACTTGTTTACATTGATACCTACATACACTATG
AATAGGTCAAAATCACACTCTTTTTAATAAGAATATAAGATAATTAAGAT
AATTTTATAAGATAATCATGATGAAATTATAACCAAATAAATTGAGAACA
TGCTAAGAATAGCACCATCATGGAATTTGGCAACTGTTCTTTAGAATGTG
GATTTTACCTATAAAATGTCAATTATCCCCAAGTGACAGGCTATAAACTT
TCACAAAAATGCTAAATCTTTGCTTGAGGTATACATATTAAATGCTAGAT
TTTGGCTTGGTTGGATCCTAGCCTAAGAATACTGTAAGAATATTTTAGAA
AGAATTTCATTAGAACTTAAGATTATCCATGATGAAATGGAAAAATAAAA
TACTTATAAAAAAGCATGTAAATGGCCTTACATTACACCATGATCAGATC
TGTTTGCAGGTGGTATACCCTGAGAAACAACAGTCAGCTAAATATTGTTT
TAACAAAGGGACAACAAGAACAGAAAGCTATAAAATTAGATGTCCGAAAT
GAATAATTTTATTTATGATTTTATATTCTTAAAATATTTCTTTTATAATT
TTTGCTAAATTTCGCATGATCACAATCTTCTTTTAGATGATTTTTTGCAA
GTAATCAAGAGAGCCAATCAAACGCCAGTGGAGAAATTTGAATTCCCACA
AACAGAAGCACAAGAAATTGGCTGGTGCACAAAACCATTGGTAAGGTCTC
AATTCAACCAACGACTTCAATTACATATAAGTAACAGACATAATTCACAT
ATAATTCATTGAATCAGGGGGGGGTCGGTACTAAGTTGTGGAGGCCAGTG
CCGGGTGGTCTCATAAGGTAAGTAAAAAACAACTTAGTACATGGTACTAA
GTGGTGGTCCTAATTGAAAAAAACATTTACGCAACTTTGTATCAAGGGAC
TAAATGGTGGTCTCAATGCCAAATGTGAGGCATCAAGTTAGTATCTGGTA
CTCAAAATCCTGCAAAATCCTGAAAAATCACAAAAAATGTTCTTTAACTT
TCTCTTGACTTATCCAATTTTTAAGAAAATGCAAGAAAATGAGTTGAAGA
GAAAGTCTTTTTGTTGTTTTCACAGCATGCTATCAGTGGTCACCATTTGT
TTGATTTGATTTGTTTTTTTATTTTAGGTAAATTCTAATTATATAAGTGA
ATAATTTTTTTCCAGCAAATTTATTTTTTGATATGGGTCAATTGTTGAAT
CTGTTTATTTCAGTAATTTTCATTTGGCTATAATTCGGTTTGCACTGATA
GCTAGAGTACATACCCTTTGAATAACTGAAAAAAACAGTTATTTATCAAC
TTTGCTTGATTAAAGTTTATGTTGATGATGTTTCAAATTAAAGAATAATT
AATTAGTTAATTAGAACTAAGTTTGTTTCTTTTGATTTAAAAAAAATTGA
CTTGAAAATGATAATTTGCCTTGACCTAACTTGACAGGAATTTTTACTTA
GATATTGTTATTGAGATTGGTACAGAGTGGTGCTGAGTGGTGTGGTACAG
GGTGGTGTTGTAAAGTTTTTTATGAAATTTAAAGGGGGTGTACCAGAAAG
TACCATTACGAAGAAAAAAGGGTGGTATACCTATTTTGAGGGGGAAAATC
AACTTAGTACAGGGTACTTAAGGGTGGTGTGTCATTTCTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNATTGAATATTAAAAATGAGCTTTTTA
CTTCAGGGAACTTTTAGATAAGATTTTGTTAGTGTGCAATTGGTTTTATA
AAAAACAAAATTAACTGAAGAGTTTTGCTCACTTCAAAAAGAGCGACTAG
ATTGAAATTTAAAGATATTTTTGTTTATCATATATCGCAAACTCTTACAA
TATGGCACATTAGCCTGATGAGCAGAGAAAAATATTTCAAGACCTAGGTC
ATTGAATCTGCCATATTGGCTGATGTCAAGCCCAACTGATGTCAAGGCCA
ACTATTCTATGTTCTTCTTTTAACTTCTTCTAACTACTTCCCATATAAAT
GAAGCGTGTCCAGTTTCAGAACTAACTAGCCATGATGTTTTCAATTCTAT
TTTGAAATTCAAACGTTCAAAAATTTAAGGTAAATTAAAAAACAATATGG
AGGACTAGTCGACTTCAAAAATGGACACTTAATGGACACACTTCCTCAGG
AAATTCAATGAGCAGTTATCTTATCTAGTGTGTAAAGGAATATGATATCT
GTGCCTCATCCTCATTTTTTACTTTTTATTTTCACATCTGATTAACCACA
ATAGATTGTTCAACCGAAAGACGATGCACGGTTACACCATCCCAAGAAAC
ATTCTGAAATCACCAAATTCATGGATGCTTACTGGAGACAAAAAGAACAA
TCTGAAAATCTAAATTAATTTTTTTTTCTGATTTTTAAATTATACTCCTT
TTATTATTATTATTTTTTTAAATTGTATATGATTTTATTTTTGTAGTGAT
AATTATTTTTTTATGAGGTATTTTAATGAATATGTAGTCAAACTATGGTG
TGTATGTAAGCTTTTATTTGTTCTTAATAATGTCCCACCAATTGTATCTT
TTTTTTTAATTCTCAGCTGAAAGTTTGGAATTTTTCAATTTTATAAATTA
TATGTGTATAAAAAAATTTACAGAGCTCCTGCTCGACAATGACAGTACAT
CATCTTCCTTAGGGAAAACTATTTTATGAAATAAATTTCACTATTATTTT
GAAAACATTTTGATGATTAACTTTTTTCCTCCAAAGTCAATTAGATCTTA
TCGGAG Coding sequence (CDS) from alignment at scaffold_222:213997..221802- >TCONS_00052960 ID=TCONS_00052960|Name=TCONS_00052960|organism=Clytia hemisphaerica|type=CDS|length=1632bp|location=Sequence derived from alignment at scaffold_222:213997..221802- (Clytia hemisphaerica)
ATTGTTCAACCGAAAGACGATGCACGGTTACACCATCCCAAGAAACATTC
TGAAATCACCAAATTCATGGATGCTTACTGGAGACAAAAAGAACAATCTG
AAAATCTAAATTAAATGATTTTTTGCAAGTAATCAAGAGAGCCAATCAAA
CGCCAGTGGAGAAATTTGAATTCCCACAAACAGAAGCACAAGAAATTGGC
TGGTGCACAAAACCATTGTGTATACATTGTCAGGAAAACCAAATTCATTG
CACGATTCTGCTGATGGTGAAGAAGATGATGGCGACCAAAAAGGAAGCAG
CTCCTGTGAATTATGTCCATCAAACAGCAATAAACTTGGAGACCATTAAG
AAAGAGCAGAAGAACCAGAAAATTTACACAAACTACAGTATAAACCCTTT
CAAGAAAAATTGTTCAACCGAAAGACGATGCACGGTTACACCATCCCAAG
AAACATTCTGAAATCACCAAATTCATGGATGCTTACTGGAGACAAAAAGA
ACAATCTGAAAATCTAAATTAAATGATTTTTTGCAAGTAATCAAGAGAGC
CAATCAAACGCCAGTGGAGAAATTTGAATTCCCACAAACAGAAGCACAAG
AAATTGGCTGGTGCACAAAACCATTGTGTATACATTGTCAGGAAAACCAA
ATTCATTGCACGATTCTGCTGATGGTGAAGAAGATGATGGCGACCAAAAA
GGAAGCAGCTCCTGTGAATTATGTCCATCAAACAGCAATAAACTTGGAGA
CCATTAAGAAAGAGCAGAAGAACCAGAAAATTTACACAAACTACAGTATA
AACCCTTTCAAGAAAAATTGTTCAACCGAAAGACGATGCACGGTTACACC
ATCCCAAGAAACATTCTGAAATCACCAAATTCATGGATGCTTACTGGAGA
CAAAAAGAACAATCTGAAAATCTAAATTAAATGATTTTTTGCAAGTAATC
AAGAGAGCCAATCAAACGCCAGTGGAGAAATTTGAATTCCCACAAACAGA
AGCACAAGAAATTGGCTGGTGCACAAAACCATTGTGTATACATTGTCAGG
AAAACCAAATTCATTGCACGATTCTGCTGATGGTGAAGAAGATGATGGCG
ACCAAAAAGGAAGCAGCTCCTGTGAATTATGTCCATCAAACAGCAATAAA
CTTGGAGACCATTAAGAAAGAGCAGAAGAACCAGAAAATTTACACAAACT
ACAGTATAAACCCTTTCAAGAAAAATTGTTCAACCGAAAGACGATGCACG
GTTACACCATCCCAAGAAACATTCTGAAATCACCAAATTCATGGATGCTT
ACTGGAGACAAAAAGAACAATCTGAAAATCTAAATTAAATGATTTTTTGC
AAGTAATCAAGAGAGCCAATCAAACGCCAGTGGAGAAATTTGAATTCCCA
CAAACAGAAGCACAAGAAATTGGCTGGTGCACAAAACCATTGTGTATACA
TTGTCAGGAAAACCAAATTCATTGCACGATTCTGCTGATGGTGAAGAAGA
TGATGGCGACCAAAAAGGAAGCAGCTCCTGTGAATTATGTCCATCAAACA
GCAATAAACTTGGAGACCATTAAGAAAGAGCAGAAGAACCAGAAAATTTA
CACAAACTACAGTATAAACCCTTTCAAGAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052960-exon-scaffold_222-1575043694:221563..221802 | TCONS_00052960-exon-scaffold_222-1575043694:221563..221802 | Clytia hemisphaerica | exon |
| TCONS_00052960-exon-scaffold_222-1575043694:217326..217385 | TCONS_00052960-exon-scaffold_222-1575043694:217326..217385 | Clytia hemisphaerica | exon |
| TCONS_00052960-exon-scaffold_222-1575043694:216363..216466 | TCONS_00052960-exon-scaffold_222-1575043694:216363..216466 | Clytia hemisphaerica | exon |
| TCONS_00052960-exon-scaffold_222-1575043694:213997..214498 | TCONS_00052960-exon-scaffold_222-1575043694:213997..214498 | Clytia hemisphaerica | exon |
| TCONS_00052960-exon-scaffold_222-1510915933:221563..221802 | TCONS_00052960-exon-scaffold_222-1510915933:221563..221802 | Clytia hemisphaerica | exon |
| TCONS_00052960-exon-scaffold_222-1510915933:217326..217385 | TCONS_00052960-exon-scaffold_222-1510915933:217326..217385 | Clytia hemisphaerica | exon |
| TCONS_00052960-exon-scaffold_222-1510915933:216363..216466 | TCONS_00052960-exon-scaffold_222-1510915933:216363..216466 | Clytia hemisphaerica | exon |
| TCONS_00052960-exon-scaffold_222-1510915933:213997..214498 | TCONS_00052960-exon-scaffold_222-1510915933:213997..214498 | Clytia hemisphaerica | exon |
| TCONS_00052960-exon-scaffold_222-1491911889:221563..221802 | TCONS_00052960-exon-scaffold_222-1491911889:221563..221802 | Clytia hemisphaerica | exon |
| TCONS_00052960-exon-scaffold_222-1491911889:217326..217385 | TCONS_00052960-exon-scaffold_222-1491911889:217326..217385 | Clytia hemisphaerica | exon |
| TCONS_00052960-exon-scaffold_222-1491911889:216363..216466 | TCONS_00052960-exon-scaffold_222-1491911889:216363..216466 | Clytia hemisphaerica | exon |
| TCONS_00052960-exon-scaffold_222-1491911889:213997..214498 | TCONS_00052960-exon-scaffold_222-1491911889:213997..214498 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_222 | supercontig | scaffold_222:213997..221802 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR029214 | FAM183 |
Blast
BLAST of TCONS_00052960 vs. Swiss-Prot (Human)
Match: F183A (Protein FAM183A OS=Homo sapiens GN=FAM183A PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.508e-21 Identity = 49/121 (40.50%), Postives = 70/121 (57.85%), Query Frame = 3
Query: 123 KEAAPVNYVHQTAINLETIKKEQKNQKIYTNYSINPFKKMYTLSGKPNSLHDSADGEEDDDFLQVIKRANQTPVEKFEFPQTEAQEIGWCTKPLIVQPKDDARLHHPKKHSEITKFMDAYW 485
KE + VHQ I E KE + QK+YT Y +NP +K++T++ KP S HD+ + D FL +I A Q P +K+ QTE QE+GW +PLI + D RL+H + S+IT + W
Sbjct: 6 KEKVIPDEVHQNQILRELYLKELRTQKLYTQYHVNPLRKIHTVTRKPMSWHDNLEEPADARFLNLIHHAAQGPRKKYPETQTENQEVGWDLEPLINPERHDRRLNHFRVCSDITLYKAKTW 126
The following BLAST results are available for this feature:
|
