TCONS_00055923 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00055923
Unique Name	TCONS_00055923
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1735

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_266:182945..188884+

transcript sequence

>TCONS_00055923 ID=TCONS_00055923|Name=TCONS_00055923|organism=Clytia hemisphaerica|type=transcript|length=1735bp
GTctagagaagaagaagaagaagagaaatGAACAGTAAAATATGgcagat
gattttttatttcttgatGGGCGCATGTCTTACTGAGGCTGTACTCAACC
CAAATGGGACTCACGTTTGTAAAGAGACTGGAAACACCACTGTTTGTTGT
AAAGGTTGGAAACAACAGGGCAACGCGTGTCCATTAGACATCGACGAATG
CACAGCAAAACCATGTcaacaaaattgcaaaaacacTGCTGGAAGTTTTC
AATGTTCGTGTAACGTAGGATACAAAGTTGACCCTAAAGACTCTTCCAAA
TGTTTGGATATTGACGAGTGCACCACAAGTCCATGTCAACAAGATTGTAA
AAATACTGCTGGAAGTTTTCAATGTTCGTGTGGAGTGGGCTACAAAGTTG
AtccaaaagatttaaaaaagtgCTTGGACATAGACGAATGCACAACAAAA
CCATGTcaacaaaattgtaaaaacacACCTGGAAGTTTTCAATGTTCGTG
TGGAGTTGGTTACAAAGTTGACCCTAAGGATTTGACAAAGTGTTTGGACA
TCGACGAATGCACAACAAATCCATGTCAGCAAGATTGCAAAAATACTGCT
GGAAGTTTCCAATGTTCATGCAAAGGAGGCTACAAAGTTGACCCCAAAGA
TTCTACAAAGTGTTTAGATATCGACGAATGTTCAACAAAACCATGTcaac
aaaattgcaaaaacacTGCTGGAAGTTTTAAATGTTCGTGTAACGTAGGC
TACAAAGTTGACCCCAAAGATAAGACAAAATGTTTGGATATCGATGAATG
TACGACAAAATCTTGtcagcaaaattgcaaaaatactgCTGGAAGTTTTC
AATGTTCGTGTAAAGATGGCTACAAAGTTGACCCTAAAGATAAGACAAAG
TGTCTAGACATTGATGAATGCACAACAAATCCTTGtcagcaaaattgcaa
aaacacTGTTGGAAGTTTTCAATGTTCGTGTAGAAAGGGATACAAAGTCG
ACCAGAAAGATTCGACGAAGTGCTTGGaCATCGACGAATGTGCTACAAAA
CCATGtcatcaaaattgtaaaaatactGCTGGAAGTTTTAAATGTTCATG
CAAAGTGGGCTACAAAGTTGACCCGAAGAACTCCTCAAAATGCTTGGACA
TCGATGAGTGCACAACAAAACCATGTCAGCAAGATTGTAAAAATACTGCA
GGAAGTTTTCAGTGTTCGTGTAGAGATGGCTACAGAGTTGATCCTAAAGA
TAGGACGAAATGCCAACCCACTTGTCTGGAAAATGGATGTGTTCAAGGTG
TTTGCAGTGCACCAAATTTTTGTGATTGTCATCCTGGATTCGTTGGCAAA
AACTGTTCGAGTGAATGCAGCGAAGACACTTTTGGCAAGAACTGTTCACA
AATTTGTTTGTGCAAGAACGGCGCATCATGTGACAAGGTGAACGGTTCGT
GCACTTGTACACCGGGATGGATAGGTGAATTTTGTGAGAAAGCATGCGAA
AATTCTTGGGGACTTGGGTGCGAGAACAATTTCACATGCGTGGCCAATCA
GACACGAGCTACAGATCACGTGACAGGAAGATGCGAGTGTGAAAGAGGAT
ATACTGGCATCAATTGTGAGAAGAAATGTGCTCAGGGTTATTACGGAGAA
AGATGCAGATCAAAATGTGGATGTATTTCAAAGAATACCTTAGATTGCAA
TCATGAAAGCGGAAGATGTTCTTGTAAGATTGGAN

Run BLAST on NCBI

transcript from alignment at scaffold_266:182945..188884+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00055923 ID=TCONS_00055923|Name=TCONS_00055923|organism=Clytia hemisphaerica|type=transcript|length=5940bp|location=Sequence derived from alignment at scaffold_266:182945..188884+ (Clytia hemisphaerica)
GTctagagaagaagaagaagaagagaaatGAACAGTAAAATATGgcagat
gattttttatttcttgatGGGCGCATGTCTTACTGAGGCTGTACTCAACC
CAAATGGGTGAGTTTGATTTTCCATTTGTGTTGAGACGGTCTAATCGACA
TGAAAATTCATATGATGAACAAAGCTAACAACATTCAACTTTCTGCATGA
TCATAATATTTTCGTATTGATATCTTTTTGGAATTCTCCCGATTTTAACT
TTTACTTCATTGTTTTACAACAGGACTCACGTTTGTAAAGAGACTGGAAA
CACCACTGTTTGTTGTAAAGGTTGGAAACAACAGGGCAACGCGTGTCCAT
TAGGTGAGTTAAAAGTCGGGCTTCTCTAGGCCATTCCCCTCTTCATTTTC
CGAGGTTCACAGCCTCCTGGACCTCTAGTTTAATAGctcatttcacagtc
gcaaagcgtaatgggtaatcaggagcactgcgcgctaatgacgacttact
attggtccaaagttttgaaaatttttgaagatttttgcgtctagctaACC
GGAAGTCGTTATTTGAGCTCAACAAGTCCTGAtgacccatgattcatttc
gactctGAAATGGGAGAAAGACCACCTCAAGATTCCCAAGTAGTTCAAAG
GAATGAGGATATTCGAAGTCGTCACTcgccctggatatcctctcttgtAG
GCTTTTTGTTataaaacattgaaacaatataagattacatgtacaaaatt
aaatttcttcATTCTTATAAccttttttaaccgttttagACATCGACGAA
TGCACAGCAAAACCATGTcaacaaaattgcaaaaacacTGCTGGAAGTTT
TCAATGTTCGTGTAACGTAGGATACAAAGTTGACCCTAAAGACTCTTCCA
AATGTTTGGGTGAGATTTTCAATGTTATAAATATTTACCCACACTCAGTT
AATGAATCGAGGCTACACATTGGGAAGGGCCTTTTTCAGGGAAGGGTTAT
TAAAGTAAACACTCGATAGAAATACCGAGAAAAATCGCGaaatattttat
ctttcttTCAGATATTGACGAGTGCACCACAAGTCCATGTCAACAAGATT
GTAAAAATACTGCTGGAAGTTTTCAATGTTCGTGTGGAGTGGGCTACAAA
GTTGAtccaaaagatttaaaaaagtgCTTGGGTAAGATTGTGTAGGAATG
TCTATAACTGAGACTGAGTAGTTTAATATTTGTTAACATAGCCAtttaga
caaaaaaaattaaatatgttATGCTCTGGCAATCATCTTTCTATGCTCTG
AGTGAAGATAGCTGGACTGGActaaaacagtttttttatctttttaaata
ctAGACATAGACGAATGCACAACAAAACCATGTcaacaaaattgtaaaaa
cacACCTGGAAGTTTTCAATGTTCGTGTGGAGTTGGTTACAAAGTTGACC
CTAAGGATTTGACAAAGTGTTTGGGTACGATTTTAAACGCACTTAGTTTG
TAATTATCTTACAGCCCTGCAAAGGTAggctaaaaaacaaaaataggcAA
ATCAAGCCGCTGCGCTTTAATGGGTGTTAACTCTCAATCCAAGAAAGATG
GAATCAGCAATCCTCGATATTTAAAGATAAATAGAAATTCTAGACTATCT
CTGCGAAGAGGTATTGCTTTCAATTTACAccctttttctttcaagaatGT
CAAAATGTGTGAACTGCCATATTTAGTACAGACTATAATCTCTTTAATTT
TCAGACATCGACGAATGCACAACAAATCCATGTCAGCAAGATTGCAAAAA
TACTGCTGGAAGTTTCCAATGTTCATGCAAAGGAGGCTACAAAGTTGACC
CCAAAGATTCTACAAAGTGTTTAGGTAAGGGTTGATCCAGTAAAGTTTCT
TGTAGTAATTTCTTCAATTTATTACCTTATCGTACTATGAAATGTCATAG
GGTTGATCGTAAAGATTTAACAAAATGTTTGGGTAAGTTCTTAGCTTACc
cattataataaaaaatcttACCAGTGAAAAGAAAAGCTCGAGAATTGATA
AATCGAAAAAATAGGAGTTTTCAATCACATTGACCCCTTTCTAACAGACA
TCGACGAATGCACAACAAATCCATGTCAACAAGATTGTAAAAACACTGCT
GGAAGTTTTAAATGTTCGTGTGGAGTAGGCTACAAAGTTGACCCCAAAGA
TAAGACAAAATGTTTAGGTAAGCCTTAATTTCACAAGACTATTTTTGAAA
TACCATTATCTGAATGAGATGCTAGACAATCGGATGAAAATTATATCCAT
GATGATGATCCTTTATCTATTAATTTCTAAACAGACATCGATGAATGCAC
AGCAAAACCATGTCAGCAAGAATGTAAAAACACACCTGGAAGTTTTAAAT
GTTCGTGTGGAGTAGGCTACAAAGTTGATTCTAAAGATCCCACAAAGTGT
TTGGGTAGGTATTACGCAACGGGTTCATGTTTAACAATTTTCATACCTAT
CTTTCTAAGTGACATCCGAAGTGATAtccgaatgaatgaatgaatgaatg
aatgatatTCTAAGCTTTCCTTCATACTCCCTCAGACATCGACGAATGTT
CAACAAAACCATGTcaacaaaattgcaaaaatacagCTGGAGGTTTTCGA
TGCTCTTGCCGGGAGGGCTACAAAGTGGACCCGAAAGATTCCACGAAATG
TTCTGGTAAGTGACGGAGAGAGTTCAGTACGTAAATTGTGATTACCCTTT
TCACGTAAATAAGTCagatcacgcatcacgcaaaaTCGTTGGTTGCTCGT
TTGGAAAGACTTAATCCATGTTAACAGTAAGATGAAAATTATATCTATAA
TATCTTCTTTATCTATTAAATCCAAACAGACATCGATGAATGCACAACAA
ATCCATGTCAACAAGATTGTAAAAACACTGCTGGAAGTTTTCAATGTTCG
TGTGGAGTTGGCTACAGAGTTGATCCTAAAGATTTGACAAAATGTTTAGG
TAAGCCTCAATTTGACTTGAGTATTTGTGGAAATCGCCATAACTTAAGTG
TAGTAACAAAGGTGTGCATGTGgatatttgttctttttcaaatttaccgA
AAAAGTTTCCAGAAGTTTCTGACAGATGTTCTCCTTAAAATACTAGAAAA
TCCTACTTTTAGTCGGTTCAAAGTACAATAATTTGTTCGTTCTTTTAGAC
ATCAACGAATGCACCACAAATCCATGTCAACAAGATTGTAAAAACACTGC
TGGAAGTTTTCAGTGTTCGTGTAGAGTTGGCTACAAAGTCGATCAAAAAG
ATTCAACAAAATGCTTAGGTAAACCTTAATTTCACAagaccatttttgaa
atacCATTATCTGAATGAGTACAACTAAGACCAATTATAAGATTTCCCAA
TAAGTTTCTGACAGACTTCAAAATACTATTTTACGGACGGTCATACAATA
CGCAATTTTTCTCTCTCAGATATCGACGAATGTTCAACAAAACCATGTca
acaaaattgcaaaaacacTGCTGGAAGTTTTAAATGTTCGTGTAACGTAG
GCTACAAAGTTGACCCCAAAGATAAGACAAAATGTTTGGGTAAGTATCAA
TTTAACATGAAGTATCTCGGAAAAGTAACGATGTTGTTAAATCAATGACT
CGAGCCAAGCCATTCATGGGTTTGTAATTTTTACCTTTCCAGAAGATTCT
GATGTAAGCTTTTCTATCTAACACGAAATTGTTCTACTTTTCACTCTTTT
AGATATCGATGAATGTACGACAAAATCTTGtcagcaaaattgcaaaaata
ctgCTGGAAGTTTTCAATGTTCGTGTAAAGATGGCTACAAAGTTGACCCT
AAAGATAAGACAAAGTGTCTAGGTAGGTAGTTAGCAAGTTAACTGTGTCC
AGATCAAgtttaaaatctgaaatctgACTGAATGATTTTCCCATTTGAAT
AAAGAATTGACGATTATACATACAAGCCCCTCTCTTTATTCTCTTTCTTA
GACATTGATGAATGCACAACAAATCCTTGtcagcaaaattgcaaaaacac
TGTTGGAAGTTTTCAATGTTCGTGTAGAAAGGGATACAAAGTCGACCAGA
AAGATTCGACGAAGTGCTTGGGTAAGACTTTGACCAAATAAAATTCGAGT
CGAAGTAAttcttaatttcattaaaacgCTTTACTACTTATTGTCAAAAT
GTCAATCTAGATTGATAAGGCCACATCTGTGGGTGCTAATTCCATGACAA
TAACATACACATCGACCTTCATCGTGAAtggactttttttctttctcaga
CATCGACGAATGTGCNAATAACATACACATAGACCTTCATCGTGAAtgga
ctttttttctttctcagaCATCGACGAATGTGCTACAAAACCATGtcatc
aaaattgtaaaaatactGCTGGAAGTTTTAAATGTTCATGCAAAGTGGGC
TACAAAGTTGACCCGAAGAACTCCTCAAAATGCTTGGGTAATAACTTGAA
TTTAAGGCCATAAGAGTAATTCTTtgcactttaaaaaaatacctcacAGT
AAATCAAGATATTTATAAAAGATAACCCGCACTTTTACTGTTATTTCAGA
CATCGATGAGTGCACAACAAAACCATGTCAGCAAGATTGTAAAAATACTG
CAGGAAGTTTTCAGTGTTCGTGTAGAGATGGCTACAGAGTTGATCCTAAA
GATAGGACGAAATGCCAACgtaagaaatgagaatttttctcGGTTTTTGC
CGAATTGAGGTTAAAATTTATCTGAAAACTGACTGTACTAAAGGACAGCT
ATCTTTATCATTAAACATAATATAAACATAATATAAGCATGAAATTTCAT
AGTagcaagaaaaaaaacaaatcaaaacttaaGGATGAATTTCATCCACT
CATTCAATTTCAGCCACTTGTCTGGAAAATGGATGTGTTCAAGGTGTTTG
CAGTGCACCAAATTTTTGTGATTGTCATCCTGGATTCGTTGGCAAAAACT
GTTCGAGTGGTAGGTAGACTTTTCACGGACTTTGATATCAGAGAGCGTAC
AAGAGACTCTTTTTTACCATTCAAATGTCAAATTCAACACACGAATGTGC
AATAAAtgaaaagttgacaaaattTCATACCAACAGTGGAAAACATGAAA
TTCACAAAAACGAACAGAAATATCGACTACAAATACACCCTAAACAAATG
AAACTAACAATATTTATTTATGTTTCATAGAATGCAGCGAAGACACTTTT
GGCAAGAACTGTTCACAAATTTGTTTGTGCAAGAACGGCGCATCATGTGA
CAAGGTGAACGGTTCGTGCACTTGTACACCGGGATGGATAGGTGAATTTT
GTGAGAAAGCATGCGAAAATTCTTGGGGACTTGGGTGCGAGAACAATTTC
ACATGCGTGGCCAATCAGACACGAGCTACAGATCACGTGACAGGAAGATG
CGAGTGTGAAAGAGGATATACTGGCATCAAGTAAGTTTGAGAAAgctaaa
tgaaaagaaagattgCACCGTTGTTCTAGAAAATCGATGTATCAAATAAT
AACCCAACATAACAGCCAAGCAAGTGTACTCTGCACAACGGTATAATATA
AAAACCGAGCCCATTTGAAAGGTCACCTAGGGATGACAAAACCTATGGTA
TTAGACAACCTCAGTTAGCaatgtatttacaattgattGTTGTTATGGTT
TGAAGccatttttcaaagttcaaatcttaaaaacaatcaAGCGCTATATT
TCACCATTTCTAAGCTTGTATTATATTTTCAAGCAGTGCTTAAACCATTG
AATTTCTTTTATCTTTAGTTGTGAGAAGAAATGTGCTCAGGGTTATTACG
GAGAAAGATGCAGATCAAAATGTGGATGTATTTCAAAGAATACCTTAGAT
TGCAATCATGAAAGCGGAAGATGTTCTTGTAAGATTGGAN

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_035215	XLOC_035215	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_266	supercontig	scaffold_266:182945..188884 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.116244	0	0	0	0	0	0.0427244	0	0.0970058	0.112047	0.020524	0.0775921	0.071783	0.137707	0.00511907	0.0182561	0.0306046	0.110599	0.0775168	0.0991579	0.0207845	0.103589	4.33719e-05	0.0309284	0.220354	0.0287299	0.0134022	0	0.034852	0

Blast

[Close]

BLAST of TCONS_00055923 vs. Swiss-Prot (Human)
Match: LTBP4 (Latent-transforming growth factor beta-binding protein 4 OS=Homo sapiens GN=LTBP4 PE=1 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 5.837e-63
Identity = 190/556 (34.17%), Postives = 269/556 (48.38%), Query Frame = 1

Query:  115 VCKETGNTTVCCKGWK--QQGNACPLDIDECTAKP---CQQNCKNTAGSFQCSCNVGYKVDPKDSSKCLDIDECTTSPCQQD---CKNTAGSFQCSCGVGYKVDPKDLKKCLDIDECTTKPC---QQNCKNTPGSFQCSCGVGYKVDPKDLTKCL-DIDECTTNPCQ---QDCKNTAGSFQCSCKGGYKVDPKDSTKCLDIDECSTKP---CQQNCKNTAGSFKCSCNVGYKVDPKDKTKCLDIDECTTKSC--QQNCKNTAGSFQC-SCKDGYKVDPKDKTKCLDIDECTTN--PC--QQNCKNTVGSFQCSCRKGYKVDQKDSTKCLDIDECATKPC---HQNCKNTAGSFKCSCKVGYKVDPKNSSKCLDIDECTTK-PCQQD-CKNTAGSFQCSCRDGYRVDPKD---------RTKCQPTCLENGCVQGVCSAPNFCDCHPGFVGKNCSS-----ECSEDTFGKNCSQICLCKNGASCDKVNGSCTCTPGWIGEFCEKACENSWGLGCE------NNFTCVANQTRATDHVTGRCECERGYTGINCEKKCA 1632
            + + +G T  C  G++   QG  C +D+DEC   P       C+N+ GSF+C C  G++  P+ +++CLD+DEC   P   D   C+NT GSF C C  GY+  P     C D+DECT  P    +  CKN PGSF+C C  G++      + C  D+DEC   P       C NTAGSF C+C  G++        C D+DEC+  P       C+NT GSF+C C +G++ +    ++C D+DEC        Q C N+ GSFQC +C  G+ +    + +C D+DEC++   PC    +C NT GSF+CSC  GY+        C D++EC        H  C NT GSF C+C  GY+  P+ +S CLD+DEC+ +  CQ   C NT GSF+C C  G+R  P           R +    C    C     S     DC PG+      +     EC E  +G    +IC       C+   GS  CTP      C+   + + G GC+      N   C A+        + +C C++GY G    + C 
Sbjct:  562 ISRPSGYTCACDSGFRLSPQGTRC-IDVDECRRVPPPCAPGRCENSPGSFRCVCGPGFRAGPR-AAECLDVDECHRVPPPCDLGRCENTPGSFLCVCPAGYQAAPHG-ASCQDVDECTQSPGLCGRGACKNLPGSFRCVCPAGFRG-----SACEEDVDECAQEPPPCGPGRCDNTAGSFHCACPAGFRSR-GPGAPCQDVDECARSPPPCTYGRCENTEGSFQCVCPMGFQPN-TAGSECEDVDECENHLACPGQECVNSPGSFQCRTCPSGHHLH---RGRCTDVDECSSGAPPCGPHGHCTNTEGSFRCSCAPGYRAPSGRPGPCADVNECLEGDFCFPHGECLNTDGSFACTCAPGYRPGPRGAS-CLDVDECSEEDLCQSGICTNTDGSFECICPPGHRAGPDLASCLDVDECRERGPALCGSQRCENSPGSYRCVRDCDPGYHAGPEGTCDDVDECQE--YGP---EIC---GAQRCENTPGSYRCTPA-----CDPGYQPTPGGGCQDVDECRNRSFCGAHAVCQNLPGSFQCLCDQGYEGARDGRHCV 1090

HSP 2 Score: 210.69 bits (535), Expect = 2.138e-57
Identity = 138/368 (37.50%), Postives = 200/368 (54.35%), Query Frame = 1

Query:  223 NCKNTAGSFQCSCNVGYKVDPKDSSKCLDIDECTTSP---CQQDCKNTAGSFQCSCGVGYKVDPKDLKKCLDIDEC--TTKPCQQ-NCKNTPGSFQCSCGVGYKVDPKDLTKCLDIDECTTNPC---QQDCKNTAGSFQCSCKGGYKVDPKDSTKCL-DIDECSTKPCQ---QNCKNTAGSFKCSCNVGYKVDPKDKTKCLDIDECTTKS---CQQNCKNTAGSFQCSCKDGYKVDPKDKTKCLDIDECTTNPC--QQNCKNTVGSFQC-SCRKGYKVDQKDSTKCLDIDECAT--KPC--HQNCKNTAGSFKCSCKVGYKVDPKNSSKCLDIDECTTKPC---QQDCKNTAGSFQCSCRDGYRVDPK 1248
             C +    + C+C+ G+++ P+  ++C+D+DEC   P       C+N+ GSF+C CG G++  P+   +CLD+DEC     PC    C+NTPGSF C C  GY+  P   + C D+DECT +P    +  CKN  GSF+C C  G++      + C  D+DEC+ +P       C NTAGSF C+C  G++        C D+DEC           C+NT GSFQC C  G++ +    ++C D+DEC  +     Q C N+ GSFQC +C  G+ + +    +C D+DEC++   PC  H +C NT GSF+CSC  GY+        C D++EC          +C NT GSF C+C  GYR  P+
Sbjct:  560 RCISRPSGYTCACDSGFRLSPQ-GTRCIDVDECRRVPPPCAPGRCENSPGSFRCVCGPGFRAGPR-AAECLDVDECHRVPPPCDLGRCENTPGSFLCVCPAGYQAAPHGAS-CQDVDECTQSPGLCGRGACKNLPGSFRCVCPAGFR-----GSACEEDVDECAQEPPPCGPGRCDNTAGSFHCACPAGFRSR-GPGAPCQDVDECARSPPPCTYGRCENTEGSFQCVCPMGFQPN-TAGSECEDVDECENHLACPGQECVNSPGSFQCRTCPSGHHLHRG---RCTDVDECSSGAPPCGPHGHCTNTEGSFRCSCAPGYRAPSGRPGPCADVNECLEGDFCFPHGECLNTDGSFACTCAPGYRPGPR 914

HSP 3 Score: 193.356 bits (490), Expect = 1.234e-51
Identity = 146/394 (37.06%), Postives = 207/394 (52.54%), Query Frame = 1

Query:  142 VCCKGWKQQGNACP-LDIDECTAKP---CQQNCKNTAGSFQCSCNVGYKVDPKDSSKCLDIDECTTSPC--QQDCKNTAGSFQC-SCGVGYKVDPKDLKKCLDIDECTT--KPC--QQNCKNTPGSFQCSCGVGYKVDPKDLTKCLDIDECTTNPC---QQDCKNTAGSFQCSCKGGYKVDPKDSTKCLDIDECSTK-PCQQN-CKNTAGSFKCSCNVGYKVDPKDKTKCLDIDECTTKSC----QQNCKNTAGSFQC--SCKDGYKVDPKDKTKCLDIDECTTNPCQ----QNCKNTVGSFQC--SCRKGYKVDQKDSTKCLDIDECATKP---CHQNCKNTAGSFKCSCKVGYKVDPKNSSKCLDIDECTTKP---CQQDCKNTAGSFQCSC 1221
             C  G++ +G   P  D+DEC   P       C+NT GSFQC C +G++ +    S+C D+DEC        Q+C N+ GSFQC +C  G+ +      +C D+DEC++   PC    +C NT GSF+CSC  GY+        C D++EC          +C NT GSF C+C  GY+  P+ ++ CLD+DECS +  CQ   C NT GSF+C C  G++  P D   CLD+DEC  +       Q C+N+ GS++C   C  GY   P+    C D+DEC     +    Q C+NT GS++C  +C  GY+        C D+DEC  +     H  C+N  GSF+C C  GY+   ++   C+D++EC T         C+N  GSF C C
Sbjct:  736 ACPAGFRSRGPGAPCQDVDECARSPPPCTYGRCENTEGSFQCVCPMGFQPN-TAGSECEDVDECENHLACPGQECVNSPGSFQCRTCPSGHHLH---RGRCTDVDECSSGAPPCGPHGHCTNTEGSFRCSCAPGYRAPSGRPGPCADVNECLEGDFCFPHGECLNTDGSFACTCAPGYRPGPRGAS-CLDVDECSEEDLCQSGICTNTDGSFECICPPGHRAGP-DLASCLDVDECRERGPALCGSQRCENSPGSYRCVRDCDPGYHAGPEGT--CDDVDECQEYGPEICGAQRCENTPGSYRCTPACDPGYQ--PTPGGGCQDVDECRNRSFCGAHAVCQNLPGSFQCLCDQGYE-GARDGRHCVDVNECETLQGVCGAALCENVEGSFLCVC 1118

HSP 4 Score: 166.392 bits (420), Expect = 7.512e-43
Identity = 127/336 (37.80%), Postives = 174/336 (51.79%), Query Frame = 1

Query:  187 DIDECTAKPC--QQNCKNTAGSFQC-SCNVGYKVDPKDSSKCLDIDECTTS--PC--QQDCKNTAGSFQCSCGVGYKVDPKDLKKCLDIDECTTKPC---QQNCKNTPGSFQCSCGVGYKVDPKDLTKCLDIDECTT-NPCQQD-CKNTAGSFQCSCKGGYKVDPKDSTKCLDIDECSTK-PC---QQNCKNTAGSFKC--SCNVGYKVDPKDKTKCLDIDECTTKSCQ----QNCKNTAGSFQC--SCKDGYKVDPKDKTKCLDIDECTTNP---CQQNCKNTVGSFQCSCRKGYKVDQKDSTKCLDIDECATKP---CHQNCKNTAGSFKCSCK 1104
            D+DEC        Q C N+ GSFQC +C  G+ +      +C D+DEC++   PC     C NT GSF+CSC  GY+        C D++EC           C NT GSF C+C  GY+  P+  + CLD+DEC+  + CQ   C NT GSF+C C  G++  P D   CLD+DEC  + P     Q C+N+ GS++C   C+ GY   P+    C D+DEC     +    Q C+NT GS++C  +C  GY+  P     C D+DEC           C+N  GSFQC C +GY+   +D   C+D++EC T         C+N  GSF C C 
Sbjct:  794 DVDECENHLACPGQECVNSPGSFQCRTCPSGHHLH---RGRCTDVDECSSGAPPCGPHGHCTNTEGSFRCSCAPGYRAPSGRPGPCADVNECLEGDFCFPHGECLNTDGSFACTCAPGYRPGPRGAS-CLDVDECSEEDLCQSGICTNTDGSFECICPPGHRAGP-DLASCLDVDECRERGPALCGSQRCENSPGSYRCVRDCDPGYHAGPEGT--CDDVDECQEYGPEICGAQRCENTPGSYRCTPACDPGYQ--PTPGGGCQDVDECRNRSFCGAHAVCQNLPGSFQCLCDQGYE-GARDGRHCVDVNECETLQGVCGAALCENVEGSFLCVCP 1119

The following BLAST results are available for this feature:

BLAST of TCONS_00055923 vs. Swiss-Prot (Human)

BLAST of TCONS_00055923 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
LTBP4	5.837e-63	34.17	Latent-transforming growth factor beta-binding pro...	[more]

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TCONS_00055923 (transcript) - C. hemisphaerica