TCONS_00056023 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056023
Unique NameTCONS_00056023
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2650

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056023 ID=TCONS_00056023|Name=TCONS_00056023|organism=Clytia hemisphaerica|type=transcript|length=2650bp
GAAAAGGAGAAAGAAGAGAGAAGTGAAAAAGTGATGGAATTACTTGAACC
AACACATTTGTTAGAATTCTTAGGCAACTCATTTAGGAAGACCACAGGTG
CAATGTTGCATTCAACACAATCAGGAAAAGTTTATGAGAACCCACTGTCA
GGACGTAAAGTTGCTCGTGTCCTGGTTATCTACACTGGAGGAACGATTGG
CATGAAAGACAATGGAACTGGAGGATACACAGTTGTCCCAAACTATTTTG
CACAAGCTTTAAAGAGACTACCCATGTTATATGATGAAGACTTTGCCGAA
AGCGGAATGCCAGAACTCAGCAATGAATGTGAAATGAACCCTGATTTACC
TTATTGCAAATATTCAAAGCTGGTTATGCCGATGTCAAAGATGGGAGTCA
GAGTGGTTTATTATATCAAAGAATTGGATCCTATACTGGATTCATCTAAC
ATGTCAATGGAACATTGGACCATGATTGCCAAAGTTGTCAAAGAGAATTA
TGATTATTTCGATTCATTTGTTATTCTTCATGGTACAGACACTATGGCTT
ACACTGCGTCAGCTTTATCATAcatgtttgaaaatttggatAAAACTGTT
GTCTTAACAGGTTCGCAGatCCCAATTTTCGAACAAAGGAATGATGGACG
TAGTAATTTCATTGGTGCATTAGTAATAGCTGGACACTTTATCATACCTG
AAGTTACACTTTTCTTCAACAACAAACTTTTCCGTGGAAACAGAAGTCAA
AAAGTTAGTGCTTCAGATCTAGATGCATTTGATTCACCAAACTTGCCACC
CCTTGCAAAACTTGGTACAGACATTGAAGTTGCTTGGGATGCTGTATTTC
CTAAAACATCAATGTTACCTTTTCACCTACacgataaaatgagtgaaaat
GTTGGTTTACTACAATTATTCCCAGGAATCAATGCTCAAATTGTTCGAGC
TTTCCTATCAGCACCAATGGAAGGAATTGTTATTGAATCTTTTGGTAGCG
GAAACATCCCATCCAATCGACCTGATCTTGTCAAAGAATTCAAGGAAGCA
GCTGAAAGAGGTGTACTGATGTTGAACATTACGCAATGTGCTCGTGGAAC
TGTCACTGATGCTTATGCTGCTGGACGTGTTCTGTTTGAGATTGGGGTCA
TCCCAGGATATGACATGACTCCTGAAGCAGCTTTAGCAAAAATGGCTTAT
GTATTAAGTAAGAAAGAAATCACACACAGTCAAAGGAGAgaatttttaga
gaaaaatattcGAGGAGAGATGACATTCCCAAAAACTCAcaaacaatttt
caatgaaGGATGGAGGATTGATCCAAACAGTTGCAAAAACTCTTAGCCTT
GGCTCTCAACAGGAAATGAATTCAGTACGAAAGACGTTGCTTCCTGTCCT
TCTCACTTGTGCAGCAAAAGCAGGTGACCTGAATTCCATCAAAGATTTGG
TTGATCAGGGTGCAAATTTGAATGAACCTTCAGATTATGATGGCAAAACG
AGTCTTCATTTAGCAGCAGCAGAAGGACATGTCAATGTTGTTCAATATTT
GTTACTTCACGGTGCTTCATACTTTGTGCGAGACCGAAGGGGAAGAACTC
CTTTGTTTGATGCTATAAGGAATAAGAATTCAAGGATAGTGGACATGTTG
ATCTCAAGTGGAGCGAACTTTGATCAAGACAATATGGAAGTTGCCAGAGA
GTTGAGTATAGCAGCAACAGATAACGATGTGGAACGGTTGAGGTTGTGGT
TGAGATGTAACGTCAATATGAACATTTCAGACCTTGAAGGAAGGTCACCT
CTTCACGTGgcTGTCCTCAAAGGGAACAAAGAAGCAGTCAAATTTCTTGT
TGAAGAAGCACATGTAAACGTCAATCGAAAAGACATCTTCGGTCGAACGC
CTATTGAAAATGCAGTCGAACTTCAATCCAAAGATGTTCTACAAATTTTG
CTACAAGTACTACAAAACAAACGAAGTAACGGTACTATGAATAAATTGAA
CGGAGTCACTGGTGATGTTAATATGAATAATCTTATAAACTGCAAAATGA
ACTGTGGGGGAAATTGATGTACTTGTTGTGGACTCAAATTTCCCCCTCAC
ATACAAATGTTTTAGCATAcatttttgctaaaagtcgAATCGTATATATA
ATAGTTTTCTACCtggattttgttgaattttgctTGCTTGCTGGCCGGAG
AATACAAATTGGTGAATTGTGTATCATACAGAGCTTGCTGAtgtcaacaa
aatatttttctttccggTAGAATAACTATATCTTATTTTATCATGTCTTA
CATTATTTTGTAATGTACATATTGATTTTCAGATCCTTGATATTTTCTCG
CATTCTGAGctgcaaaaaattctttgtcACTTCCATCATggttcttttca
aaaaaaaatcttccaaTCTTTTAATCTCAGGGATAAGGCTTGTTTTATGT
TATTtatatgaaagtttttttttgaaagtatatTTATTTGAGATATCTTT
ATACTGTacataatttgtaaatagttcaTCAAATTTATTCAAGTCAAAAA
AGATGGTTAACaatgaaattcaatgtttagaGTTTTGTTCTTGTACATGA
CTAAAAAGAAAGATGATGTagtattttgaaatacagaaGCATCTGGCGAT
Run BLAST on NCBI

transcript from alignment at scaffold_266:399586..406938-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056023 ID=TCONS_00056023|Name=TCONS_00056023|organism=Clytia hemisphaerica|type=transcript|length=7353bp|location=Sequence derived from alignment at scaffold_266:399586..406938- (Clytia hemisphaerica)
GAAAAGGAGAAAGAAGAGAGAAGTGAAAAAGTGATGGAATTACTTGAACC
AACACATTTGTTAGAATTCTTAGGCAACTCATTTAGGAAGACCACAGGTA
AAATAGTTTCTATGTGAAGATCCTCTTGTTAAGATGGAGACATCTTCTCG
TATTAAGTTTTAGTTTGACAAGTTTGTTTGCATTTTTCTTCGAAAGACTC
TGTCCATACTTTAACATGAGTTGAAATTTTTCGAAATCAAGATGGCAATG
ATAAGCATGCATGCGTGTTTCGTAATGCGCTGATTCGCGCTTCAAATCCG
AAGGCGTTTATTTTGCGTAGACTACTTAATGTGTGTTCCGAAATTCCAAC
AAATGCTTGCGAATGCTTTGTCATCAGATATTTCAAGCGTTTATATAGGA
TGATTCATTTTGTATATTTTCTTACTTTTTTTCTTCGGTAGATTATCATT
CCTTGTCTTTAATTCCCTTTAATTCAATGAGCAACCCAAAGCCTCTTTCT
CATACCTTTGAAATTCCCTCAATGAACTCGTGAGTTTGTGAAGGAACCTT
CTCTATATTTCTACAGTTCTCAACTATATAACATTTTGCAACGTTTAACG
AAGTTACATCACCTCATTACACTACAAAGTCACCTGGTTTCCATAACAAC
AAGGCGTAATCACGTTGTTAAATCGTGTCCCGGAAGCTCCCTCGTTGTAA
TAAGTGTCGTCTGTTGTAATTCCTTCCCAGTTTTCACCTATTTCGTTCGC
AATCACGTGTTCAAAAGCATGCCATGATTTCTCATCTTTATTCTCTCGCT
TCAATAACTCCGGTAACCGAAGAAACTTCTGCTGCAATAGATTCTTCAGA
TTGCTCGAGGCGGAAAAGAAACCCTCGAAAACTTTGAACTCCCTTTTGTC
TCGATGTTAGGTAATACTTTTCAGCCAGAATTGTAGCAAAATTTGAATAG
AGATCTCAAATTTGAACATCATTCCCGTCTGATAGGTGTTTTGGAAGGAG
GGTGACAAAATTATTTGTTTTTGTACGTTAATTTGCTTTTTGGAGGAGTG
TATATTTGAGGTATTTGATTGGATCAGCGATGTGTATTTTGTGTGTTTTA
AACAAAGAAATCTCAACGACAGCATCGAGTGAGTAGTGTATTGTCTTCAC
TTGGTCACTTTTAGCATGGTGTTATAATTCGATGCTTTCAGCATTTCTAT
GTTTTGGTGGCCCAATTTTTTATGATGATGTATTCTTTAACGATTCTAGG
CCAAATAAACATTTTTGATAATAGTTCCTGGGATGGGACCCTTTTCATTT
AATCTTCAATCAGATAACATATTTTGCAGAAAATAGGTTTGTTACAGGTT
GATATTTTGCGATATTTTTACTTATTCATGGTTTATGGAAATCATAAGAC
GATCCCGTGATTTCTGTAAATAATTCAGCGAGCGAACAGTTTGAGTCATT
ACAGTCAAAGTTGCTATTGCTGTTAAATTCATTTTGGTTTGTTTCGTTGC
GGCCTGGGGGGGTAGGCAAATGGAGGTTACGGTATGTGCCGCCCTTAAGG
GTACCTTTTTTGGAATTCCAAAGTCCCGCTAAGGGTCGGAAAAATCAGAA
AATCAAATTTCAGTCCCACTAAGGGTCGGAAAATAGGAAAATTTCAACTT
ACCCCTTGAAAAATTTAAATTTGGTCAAAATTGGTCAAATTTGTTCCGCA
AAGGGTCGTAAAATTCCCAAAATTTTCCTTTGTTTTCTCCTTTTTAGTCC
CGGTAAGGGTCCAAAGTTCGAAAGTCGGGCGGCACCCCCCCCCAGCTCGC
AACCCCCGGGCGTTGTGGGTTTTCGTGTAAGACTTTAGGAGTAGCTTTCG
TGTTAAGTGCTTATGTAATTATCTATGGAAGGAATAAACTTTATACTTAG
TCATGGTATGCGATTTGCTACGCGTAGGTAGTCGCGCTGGTATGTAGACC
AAAAGAAGGAAGCAAAAGTTGAAAGGGTAGAAAGAAATTCAAAGCTGATG
AAATCTCCCGCCGCTTTTTCATTCATGAGTTTTAATTATGTAGAGAAAAA
TGCATATTTAAAATTCCTTGCATAATTTCTTTTCTTCGAGTAACATAATT
TATGCATAATTAAAATACTTTGACTGGGGAGTTATTTTTGCGAGTATAAA
TTATACAAAAGTTTGTTTTGTTTGCATAAATTACTAGTAAAAATATAACG
CTGTAAAAATTTCTGATGTAATTTTTAGATACGATTTCTAGGGAGCCACT
GGTTTCCTATAAATGGAATTGAAAATGTGGAATAGCTTCAGTTAAAGATT
AAGATCTGGAAAAGAAGGACTTTTTCATGTCAAGAAATTCTCGAAAGTGT
TTTTAAAATTTAAATTTTATTCAAGTTTTGCTGTAACTTTTCAACGTTTA
TCAATCAAAANCGGGCGTTGCGGGTTTTCGTGTAAGACTTTAGGAGTAGC
TTTCGTGTTAAGTGCTTATGTAATTATCTATGGAAGGAATAAACTTTATA
CTTAGTCATGGTATGCGATTTGCTACGCGTAGGTAGTCGCGCTGGTATGT
AGACCAAAAGAAGGAAGCAAAAGTTGAAAGGGTAGAAAGAAATTCAAAGC
TGATGAAATCTCCCGCCGCTTTTTCATTCATGAGTTTTAATTATGTAGAG
AAAAATGCATATTTAAAATTCCTTGCATAATTTCTTTTCTTCGAGTAACA
TAATTTATGCATAATTAAAATACTTTGACTGGGGAGTTATTTTTGCGAGT
ATAAATTATACAAAAGTTTGTTTTGTTTGCATAAATTACTAGTAAAAATA
TAACGCTGTAAAAATTTCTGATGTAATTTTTAGATACGATTTCTAGGGAG
CCACTGGTTTCCTATAAATGGAATTGAAAATGTGGAATAGCTTCAGTTAA
AGATTAAGATCTGGAAAAGAAGGACTTTTTCATGTCAAGAAATTCTCGAA
AGTGTTTTTAAAATTTAAATTTTATTCAAGTTTTGCTGTAACTTTTCAAC
GTTTATCAATCAAAAATGGTTTGCTCGTTTTCTTTTGACAATATTATGGA
ATCTAAAACAAAAGAAAGTAAGTATAAGAAAAAAATATTTCATTTCAATA
TTGATAAAATTTTCCTCATTTTCGAGGAGGAATGAAAGAGGTGTGTTTCA
GTGAGTGTTGTCTCTCTTTTTTTATCCAAAAATTTTAAGAGGTTCAACGT
TTTGATTTATCCGCGGTTTTTTTATAGACGCGTTTGTGGAGCAATACGAA
AATAAAACTTTTTGCTAAGAGTTAGTGCTTTGGTGTGTTTAAATTGAAAG
ATACCAGTTTATTTTAAATATTGTTCAGTTAATGAGAGAGTTTCTCTGTA
GTTGTTAAATGATGAACTTTTTTTTTAATTCTGATTTTTTCAGCTGCCTT
TCTATCTCTTTCCCAGTAAAATTACACAAGCCTCATTTTTTTATAAAAAC
ACAAAAAATGAAATTCTTTCTGTGTTTTTTTTTGTTTCAAAATGGGTCAA
GAGAAGATTAAGATATGGTTTTTGAATAAATCCATGAAAAGGGTTTTTGT
TCAACTGCCAACATTAATAGTGAAAATGTCAGATTATTTACCTGACATGA
GTTTTTAAAATTTATTTAAAATCATGCTAGTATGTCATTTTTATTTACAC
ATCATTCTTTTCAATATTTCTAGGTGCAATGTTGCATTCAACACAATCAG
GAAAAGTTTATGAGAACCCACTGTCAGGACGTAAAGTTGCTCGTGTCCTG
GTTATCTACACTGGAGGAACGATTGGCATGAAAGACAATGGAACTGGAGG
TGTGTATGATTCTAATATTTTTGTAAATTTCTACTCATCCAAAGAATTCA
CAGCGATGTTGAAGTGCGGAGCCATCTTCTTATTCCTGTTTCTTTTTAAA
CCAAATTACAGTTCAAAGGCTAATTTTTGATCTATTTTTTAGGATACACA
GTTGTCCCAAACTATTTTGCACAAGCTTTAAAGAGACTACCCATGTTATA
TGATGAAGACTTTGCCGAAAGCGGAATGCCAGAACTCAGCAATGAATGTG
AAATGAACCCTGATTTACCTTATTGCAAATATTCAAAGCTGGTTATGCCG
TAAGTATTTTATGAATGATTGCCAGTACCTTTTTGGAATTTAAAGTTTGT
CGATTGTTTTATAAATTAAATGATTTCTTTTTTATTTATGTTTTTGAAAC
TTCTTCAAGAATACTGTGTTACATTGAGCGTGAGTAGGCTTTGACTCTAG
ATAGTTTCTTTTGCCTTTTAGGATGTCAAAGATGGGAGTCAGAGTGGTTT
ATTATATCAAAGAATTGGATCCTATACTGGATTCATCTAACATGTCAATG
GAACATTGGACCATGATTGCCAAAGTTGTCAAAGAGAATTATGATTATTT
CGATTCATTTGTTATTCTTCATGGTACAGACACTATGGCTTACACTGCGT
CAGCTTTATCATACATGTTTGAAAATTTGGATAAAACTGTTGTCTTAACA
GGTTCGCAGGTAATTTGAAAGAAACACTTTTTCAACAACTTCATTTATGT
TCTCATGGGAATTTCCCTACTGTACACATTCTCTTTTATAATGATTGACA
GATGATGTAACATTACATAACTTTATAGAGTTGATTAGTTAATCTTTTTG
ATATTGTTTACTCAGTAACTTTTAGTTATAATCCATTGTTATTTTGTTTT
TATAGATCCCAATTTTCGAACAAAGGAATGATGGACGTAGTAATTTCATT
GGTGCATTAGTAATAGCTGGACACTTTATCATACCTGAAGTTACACTTTT
CTTCAACAACAAACTTTTCCGTGGAAACAGAAGTCAAAAAGTTAGTGCTT
CAGATCTAGATGCATTTGATTCACCAAACTTGCCACCCCTTGCAAAACTT
GGTACAGACATTGAAGTTGCTTGGGATGCTGTATTTCCTAAAACATCAAT
GTTACCTTTTCACCTACACGATAAAATGAGTGAAAATGTTGGTTTACTAC
AATTATTCCCAGGAATCAATGCTCAAATTGTTCGAGCTTTCCTATCAGCA
CCAATGGAAGGAATTGTTATTGAATCTTTTGGTAGCGGAAACATCCCATC
CAATCGACCTGATCTTGTCAAAGAATTCAAGGAAGCAGCTGAAAGAGGTG
TACTGATGTTGAACATTACGCAATGTGCTCGTGGAACTGTCACTGATGCT
TATGCTGCTGGACGTGTTCTGTTTGAGATTGGGGTCATCCCAGGATATGA
CATGACTCCTGAAGCAGCTTTAGCAAAAATGGCTTATGTATTAAGTAAGA
AAGAAATCACACACAGTCAAAGGAGAGAATTTTTAGAGAAAAATATTCGA
GGAGAGATGACATTCCCAAAAACTCACAAACAATTTTCAATGAAGGATGG
AGGATTGATCCAAACAGTTGCAAAAACTCTTAGCCTTGGCTCTCAACAGG
TAAAATGAAAAGATATTTATAGATTGATAAAATTTTCCCATATGAAAGTT
TATAAATTCTTCTTTGAGCTATATCACTTTCACTTCTCACACTCTTGGAT
GTTTACATCTTATTTAACAATGTTTATCAATTTATCTTATCCAGGAAATG
AATTCAGTACGAAAGACGTTGCTTCCTGTCCTTCTCACTTGTGCAGCAAA
AGCAGGTGACCTGAATTCCATCAAAGATTTGGTTGATCAGGGTGCAAATT
TGAATGAACCTTCAGATTATGATGGCAAAACGAGTCTTCATTTAGCAGCA
GCAGAAGGACATGTCAATGTTGTTCAATATTTGTTACTTCACGGTGCTTC
ATACTTTGTGCGAGACCGAAGGGGAAGAACTCCTTTGTTTGATGCTATAA
GGTATGTATTACATAATATTGCTTTTAAACGTTGTCAATTTTTTATTTTA
ATCTGATTTGCCATTTTCACTTATTCGTATCTTGGTTTTTTTAAACAAAT
ATTTCTGCCTGTGGTTTATAGATATTAGTATTACCTGGATAATTAATGTA
AAATTTCTTTCCCTTTTTTAGGAATAAGAATTCAAGGATAGTGGACATGT
TGATCTCAAGTGGAGCGAACTTTGATCAAGACAATATGGAAGTTGCCAGA
GAGTTGAGTATAGCAGCAACAGATAACGATGTGGAACGGTTGAGGTTGTG
GTTGAGATGTAACGTCAATATGAACATTTCAGACCTTGAAGGAAGGTCAC
CTCTTCACGTGGTAAGTGGCCTTATAGTCTATTTTATAAAAAATATTTTT
CAACTTCTTTATTGTTGAATAAAAAAATTCACATGAAAATTAACTTCTAC
ATTATACTAAATGCTTTAACGTGAAGGATAACAGCGATATAATTGGTATG
ATAAAATAACAATATTTACCACGATTTGAATGGTAATGAACTGTTAATAT
CCAAGTTTGTAATATTGATATATTTTCTCNTAACAATATTTACCACGATT
TGAATGGTAATGAACTGTTAATATCCAAGTTTGTAATATTGATGTATTTA
TTTATTTTTCAGGCTGTCCTCAAAGGGAACAAAGAAGCAGTCAAATTTCT
TGTTGAAGAAGCACATGTAAACGTCAATCGAAAAGACATCTTCGGTCGAA
CGCCTATTGAAAATGCAGTCGAACTTCAATCCAAAGATGTTCTACAAATT
TTGCTACAAGTACTACAAAACAAACGAAGTAACGGTACTATGAATAAATT
GAACGGAGTCACTGGTGATGTTAATATGAATAATCTTATAAACTGCAAAA
TGAACTGTGGGGGAAATTGATGTACTTGTTGTGGACTCAAATTTCCCCCT
CACATACAAATGTTTTAGCATACATTTTTGCTAAAAGTCGAATCGTATAT
ATAATAGTTTTCTACCTGGATTTTGTTGAATTTTGCTTGCTTGCTGGCCG
GAGAATACAAATTGGTGAATTGTGTATCATACAGAGCTTGCTGATGTCAA
CAAAATATTTTTCTTTCCGGTAGAATAACTATATCTTATTTTATCATGTC
TTACATTATTTTGTAATGTACATATTGATTTTCAGATCCTTGATATTTTC
TCGCATTCTGAGCTGCAAAAAATTCTTTGTCACTTCCATCATGGTTCTTT
TCAAAAAAAAATCTTCCAATCTTTTAATCTCAGGGATAAGGCTTGTTTTA
TGTTATTTATATGAAAGTTTTTTTTTGAAAGTATATTTATTTGAGATATC
TTTATACTGTACATAATTTGTAAATAGTTCATCAAATTTATTCAAGTCAA
AAAAGATGGTTAACAATGAAATTCAATGTTTAGAGTTTTGTTCTTGTACA
TGACTAAAAAGAAAGATGATGTAGTATTTTGAAATACAGAAGCATCTGGC
GAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035250XLOC_035250Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056023-exon-scaffold_266-1575043694:406842..406938TCONS_00056023-exon-scaffold_266-1575043694:406842..406938Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1575043694:403140..403265TCONS_00056023-exon-scaffold_266-1575043694:403140..403265Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1575043694:402840..402996TCONS_00056023-exon-scaffold_266-1575043694:402840..402996Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1575043694:402430..402667TCONS_00056023-exon-scaffold_266-1575043694:402430..402667Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1575043694:401490..402233TCONS_00056023-exon-scaffold_266-1575043694:401490..402233Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1575043694:401088..401344TCONS_00056023-exon-scaffold_266-1575043694:401088..401344Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1575043694:400728..400917TCONS_00056023-exon-scaffold_266-1575043694:400728..400917Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1575043694:399586..400426TCONS_00056023-exon-scaffold_266-1575043694:399586..400426Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1510915933:406842..406938TCONS_00056023-exon-scaffold_266-1510915933:406842..406938Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1510915933:403140..403265TCONS_00056023-exon-scaffold_266-1510915933:403140..403265Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1510915933:402840..402996TCONS_00056023-exon-scaffold_266-1510915933:402840..402996Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1510915933:402430..402667TCONS_00056023-exon-scaffold_266-1510915933:402430..402667Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1510915933:401490..402233TCONS_00056023-exon-scaffold_266-1510915933:401490..402233Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1510915933:401088..401344TCONS_00056023-exon-scaffold_266-1510915933:401088..401344Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1510915933:400728..400917TCONS_00056023-exon-scaffold_266-1510915933:400728..400917Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1510915933:399586..400426TCONS_00056023-exon-scaffold_266-1510915933:399586..400426Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1491911889:406842..406938TCONS_00056023-exon-scaffold_266-1491911889:406842..406938Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1491911889:403140..403265TCONS_00056023-exon-scaffold_266-1491911889:403140..403265Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1491911889:402840..402996TCONS_00056023-exon-scaffold_266-1491911889:402840..402996Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1491911889:402430..402667TCONS_00056023-exon-scaffold_266-1491911889:402430..402667Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1491911889:401490..402233TCONS_00056023-exon-scaffold_266-1491911889:401490..402233Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1491911889:401088..401344TCONS_00056023-exon-scaffold_266-1491911889:401088..401344Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1491911889:400728..400917TCONS_00056023-exon-scaffold_266-1491911889:400728..400917Clytia hemisphaericaexon
TCONS_00056023-exon-scaffold_266-1491911889:399586..400426TCONS_00056023-exon-scaffold_266-1491911889:399586..400426Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_266supercontigscaffold_266:399586..406938 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000797649	0.909529	6.73036e-07	0.230114	7.86744	7.41361	32.0996	30.2608	51.5365	76.66	38.0118	149.694	20.906	5.72116	6.30335	4.39912	15.1467	19.0767	14.0654	21.2052	72.9137	110.288	8.60851	12.4608	0.95197	0.00973265	13.162	15.5676	25.8023	23.4532
Blast
[Close]
BLAST of TCONS_00056023 vs. Swiss-Prot (Human)
Match: LPP60 (60 kDa lysophospholipase OS=Homo sapiens GN=ASPG PE=2 SV=3)

HSP 1 Score: 434.106 bits (1115), Expect = 8.900e-141
Identity = 236/564 (41.84%), Postives = 344/564 (60.99%), Query Frame = 1 
Query:  166 RVLVIYTGGTIGMKDNGTGGYTVVPNYFAQALKRLPMLYDEDFAES-GMPELSNECEMNPDLPYCKYSKLVMPMSKMGVRVVYYIKELDPILDSSNMSMEHWTMIAKVVKENYDYFDSFVILHGTDTMAYTASALSYMFENLDKTVVLTGSQIPIFEQRNDGRSNFIGALVIAGHFIIPEVTLFFNNKLFRGNRSQKVSASDLDAFDSPNLPPLAKLGTDIEVAWDAVFPKTSMLPFHLHDKMSENVGLLQLFPGINAQIVRAFLSAPMEGIVIESFGSGNIPSNRPDLVKEFKEAAERGVLMLNITQCARGTVTDAYAAGRVLFEIGVIPGYDMTPEAALAKMAYVLSKKEITHSQRREFLEKNIRGEMTFPKT-HKQFSMKDGGLIQTVAKTLSLGSQQEMNSVRKTLLPVLLTCAAKAGDLNSIKDLVDQGANLNEPSDYDGKTSLHLAAAEGHVNVVQYLLLHGASYFVRDRRGRTPLFDAIRNKNSRIVDMLISSGANFDQDNMEVA-RELSIAATDNDVERLRLWLRCNVNMNISDLEGRSPLHVAVLKGNKEAVKFL 1848
            R+L +YTGGTIGM+     G  V     A  L+ LPM +DE+ A + G+ E                  LV+P +    R++Y + E  P+ DSS+M++  W  +A+ +K +Y+ +  FV++HGTDTMA+ AS LS+M ENL KTV+LTG+Q+PI    +DGR N +GAL++AG ++IPEV LFF N+LFRGNR+ KV A    AF SPNL PLA +G DI +  + V          +H  M ++VGLL+L+PGI A +VRAFL  P++G+V+E+FGSGN P+ +PDL++E + A ERG++++N T C +G VT  YAAG  +   GVI G+DMT EAALAK++YVL +  ++   R+E L K++RGEMT P    ++ S++   L   V+  LSL   QE +++R  L+P L   AA AGD+ +++ LV+ G++L    D++G+T LH AA  GH   V  LL  G     RD  G +PL  A+R ++  ++ +L  +GA+     +E A  EL   A   D+E L++W +   ++     +G S LHVA   GN   V FL
Sbjct:   10 RLLAVYTGGTIGMRSEL--GVLVPGTGLAAILRTLPMFHDEEHARARGLSE----------------DTLVLPPASRNQRILYTVLECQPLFDSSDMTIAEWVCLAQTIKRHYEQYHGFVVIHGTDTMAFAASMLSFMLENLQKTVILTGAQVPIHALWSDGRENLLGALLMAGQYVIPEVCLFFQNQLFRGNRATKVDARRFAAFCSPNLLPLATVGADITINRELVRKVDGKAGLVVHSSMEQDVGLLRLYPGIPAALVRAFLQPPLKGVVMETFGSGNGPT-KPDLLQELRVATERGLVIVNCTHCLQGAVTTDYAAGMAMAGAGVISGFDMTSEAALAKLSYVLGQPGLSLDVRKELLTKDLRGEMTPPSVEERRPSLQGNTLGGGVSWLLSLSGSQEADALRNALVPSLACAAAHAGDVEALQALVELGSDLGL-VDFNGQTPLHAAARGGHTEAVTMLLQRGVDVNTRDTDGFSPLLLAVRGRHPGVIGLLREAGASLSTQELEEAGTELCRLAYRADLEGLQVWWQAGADLGQPGYDGHSALHVAEAAGNLAVVAFL 553
The following BLAST results are available for this feature:
BLAST of TCONS_00056023 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LPP608.900e-14141.8460 kDa lysophospholipase OS=Homo sapiens GN=ASPG P... [more]
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