TCONS_00057250 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057250
Unique NameTCONS_00057250
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length752

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057250 ID=TCONS_00057250|Name=TCONS_00057250|organism=Clytia hemisphaerica|type=transcript|length=752bp
gaggtaaacgttgctcgtgacgtaattcataaaaaggtctattttgggta
ttttaacgttttttcaCAATATCTCGGGCGAGAATTATGGTTTCAGTACT
CTTTGGTTTAACTTCCTTCTGTTTTTCACTTCAGGATTTTAGACTCTTGT
ACAGCGTTAATGAAAGCAATccgagaattaattttgaaatccaAAGATCT
TCAGGACGAAATTGTGTCTGAAGGAAGAGGTTCGGCGTCGGTGAAAGACT
TTTACAAACGGCATCATAAATGGACAGAGGGATTACTGTCAGCAGCTAAA
TCGGTTGGTTACGGAGCTACAATTTTAGTAGATGCAGCTGATAAGGTGAT
CGAACGAAAAGGGAAATTCGAAGAGTTGGTTGTTTCGTCACATGAAATTG
CTGCTTCGACCGCACAACTAGTTGCAGCATCTCGAGTGAAAGCACACAAA
ACAAGTACACGACTTCCACCACTCATGACTGCATCCAAAGgagTTGGTGA
GGCAACAGCGGGGGTTGTAGCAGCCGTACGGAGTGGTGCATCTATGACCG
AGGAATCTCaGACCGTTCCTGATTATTCGAAGATGTCTTTAACACAAGCC
AAACGATACGAGATGGACAGCCAGGTCAAAATTTTGGAGTTGGAAGACAA
ATTACAGAAAGAGCGGCAAAATTTGGGACGGTTACGTCAAGCACATTATC
AAATCGCTGTCGAGATGTATGGTGAAGATGCTGTCACCATGGATTAACGC
TG
Run BLAST on NCBI

protein sequence of TCONS_00057250-protein

>TCONS_00057250-protein ID=TCONS_00057250-protein|Name=TCONS_00057250-protein|organism=Clytia hemisphaerica|type=polypeptide|length=195bp
MKAIRELILKSKDLQDEIVSEGRGSASVKDFYKRHHKWTEGLLSAAKSVG
YGATILVDAADKVIERKGKFEELVVSSHEIAASTAQLVAASRVKAHKTST
RLPPLMTASKGVGEATAGVVAAVRSGASMTEESQTVPDYSKMSLTQAKRY
EMDSQVKILELEDKLQKERQNLGRLRQAHYQIAVEMYGEDAVTMD
Run BLAST on NCBI

transcript from alignment at scaffold_286:392761..403315-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057250 ID=TCONS_00057250|Name=TCONS_00057250|organism=Clytia hemisphaerica|type=transcript|length=10555bp|location=Sequence derived from alignment at scaffold_286:392761..403315- (Clytia hemisphaerica)
GAGGTAAACGTTGCTCGTGACGTAATTCATAAAAAGGTCTATTTTGGGTA TTTTAACGTTTTTTCACAATATCTCGGGCGAGAATTATGGTTTCAGTACT CTTTGGTTTAACTTCCTTCTGTTTTTCACTTCAGGATTTTAGACTCTTGT ACAGCGTTAATGAAAGCAATCCGAGAATTAATTTTGAAATCCAAAGATCT TCAGGACGAAATTGTGTCTGAAGGAAGAGTAAGTATGTCCAAACATTCCA TAAGGAATTTAAGGTTACTATACCGTTACGAAGCTGTTTGTTTATGGGTC TGTGAAAAGGGGGTGTAATCGTGTACTGTTAGTTTCAAGACCTTTCCCCC AGTAACTGTCTGAACATACTAAGGTTTAATATACAGTAAACTCTCGCTTA TTTAAACTTTTATTATTCGAACTCGTTTCTAGTCTTCGAATCAACGAGAT TCAACTGTAATTACGTAAAATCAAAGCTTCGAAACTCTCCCCTTTCACAT GAGAGCCTGTTTAGAATTTTTATAACTCTTCAATTTTGTGACTTTTAATT TTCACAGGGTTCGGCGTCGGTGAAAGACTTTTACAAACGGCATCATAAAT GGACAGAGGGATTACTGTCAGCAGCTAAATCGGTTGGTTACGGAGCTACA ATTTTAGTGTAAGTTTTCCCCCCTTTCATCCTATCGAGGGGGACGTATGG GGGACGCGAACATCGAAATACCCACGCATTTTTCTTAGATCACCGTCAAC ACTGATCAGCATAAATTGCAAAATTCCATATTTTGTTGCCACATGGCATT TTTGACATCATAACATTTCTTCAAACACCGAAACATCAACGGAGAACACC AGGCTTAAAACCTATACGCTCTCTACCCCGCCTCCTCTCTCCTTCCTCCG CTTTCCAATTAACTTGATAGTCAAGGAGCGATACGAAACCATATAACATC TGAACATGGTCTTAATTAGCCTGTACCAAACTCTCCTTCGCTTGCTGAAA AGATAACGCGAAGTTCGACGCACGCCAAGTTTTTTTCAAAATATAAAAAA CCCCTTACATGCTAAGTCTTAATTTTTATTATCTTTTTATCAACAGAGAT GCAGCTGATAAGGTGATCGAACGAAAAGGGAAATTCGAAGAGTTGGTTGT TTCGTCACATGAAATTGCTGCTTCGACCGCACAACTAGTTTGTTCATTTA TACACTATTTTCTTGTTGACCCATTCTATGGAATTATTTTTTGTCTTATA AACGCGTGTTTTCATTTTCAATCTTTTTCACTTCTGTCAAAAGAAAAGAA GCTTTAAAGACTGGTGCCTTTAATTCGAGATGTACTTCGGTTGATTGAGG ATATTTTTTATGATATAAAAAGGAAAAGCGCCTCTAGTATGCTGAAAAAG CAAAATAAGCAAAAGAATTTCCCAACATTTGTGCGCCCGCGGCACCGAAA GTCGCCGTTCTTTTATTTGAAAATGCTATGTAAGCAAACGATGAGAGTAT AAATTATAAATTTTGTCCTTTAAGAAAAAGTGAAAAATTCTTAAATTTTT TTCTCAACCAGGTTGCAGCATCTCGAGTGAAAGCACACAAAACAAGTACA CGACTTCCACCACTCATGACTGCATCCAAAGGAGGTAAAAAAAAGATTGA AAAAAAGTATTTTATTGAACTGGTTTACCATTGGCCATTCTATATAACCG AAAATTTCCAGGGGATAATCCGAAATTGTTTTCCAGGGGGTCTAAGGGAA GCTTTCGTATTTTTTCTAGGGAGGTTGAGAATGCTTTTGTGTTATTTTCC AGTAGAGTGTTTGATTTTAGTTGTTGCAAAATTGAACCTGCGGTTAAGCA AAAAGTGAGCATTTTAGTTAGAAATTGACCGGTAAAATTGCCATTGATCC AGATTTTAACTCAAAAACTTTCATTTAAAGTAAAGTACCAAATTTGTCAG CAATTTTTAAACTCTGGTTTGTAAAATACCAACCAAATAGCAGGCCTACC TGAAGTTTTACATATCATTTTCAGTTTGTCAACATCTATAACGGGTCAAA GTTTAAAACTCAATCCTGAAATGTGAGTGAAAATTTCATCTCCTTCAATA CACTCTTCTCGAGATACATAAACTTAGTGTTGCCCTCGTTCTCAAATACA TTTGATTGCTATGAAATTCAGCGTTGATCCTTACATATTCAAATCAGTCT AAATTCCCAAAAGGCAAGTATTAGCTCTCAAACAAAAGAACATTAAATTC AAAATGTCTCTCGTAAACAACACAATTACCATTATGAATATGTGATTTTA CAGCAATCCAATCTGTTTGAAAACGAGGCCAACAATAAGTTAATGCATCT CGAGAAGAGTGTATATGCAGGAAGATTCTTAAAGGGCTGACGTTTACCAG GCTTTTCAGAAACAAATAGAGGGACAAAAGGATAAGTAATTTTGATTATT TTTATTCATTATCATTCATAATAATATACGTAATATAAGAAAAAAACCGA TATTAGAAAAACAAGAAAAAACTGAAAAAAAACTCCTCAAAAAATACCCT GAAAATGGTGGAAAATACTGCAAATAAATAATTCCAAAAATGAAAAAAAA GATAAAAAAATTGGAAAAATTATAATAAAAATTGTGCGTTAACTTTCACT CGATGCGTGACTCAATGGCTTGGCGAGCTCTGTCTTTGGCTCGTTTTCGG AATAATCGTCGTTTTGCTGTCTTCGTGAGTTTTTTGGGAATGATTTGATC CCAAAGGTTATTCGAAAGTGATTTTTCGTACAGTTCTGCTGAGTTGCCTT CATCGTTGTGCTTCAAGTGGCAATCATTAGGTACTTTGTGTGTTTTCTCT TCTGTGAAAGAATTCTCATAAGTACAGTCAACGTTGCTGCTGAACATTGG TGTGAAGATATCGACTTTGTTTGGAGCTGTAGAGGCTCTATACCACGCGC CCTCATTGTAATTACCGTACAATCCAGATGTGTTGACTTCGTTTGTAGTT TGGACTAAGCGATTCCATACGCTCTGGTTGTTATTACCATACATAAATTC GAAAGCGTCGACTTTGATTTGTGGTACACCTTGCCGTACGTGCGTTTCTG GTTTGCGGACAGCATCCATGGCCCGTTGGGTGCTGACCCGCAACTCAGCT TCTCGTGCGTAGTAAGCATGACGAACTTTGTCTTCGAGTGTCATACGATC TCTTTGTTGCTGGATTCTTGAGGCGCTTCGTTGCCAACCAATGGGTTTGA CAGATTCGTTTTGCCGACCGATTGCATCCATTTCGAATGATTCAGATATT AGATACTATATTTTACTTTGATTAACGTTTACAACTGTTTAATTGCTTGT CATTCACTGCTTTAACAAACAATGTACTAGCGAAAACTACTTCCGAAAAT CTGTATCTCGATTGTTATTCAAATATGATATTTGACGTCAATTTCTACGT AAAAAAAATGGTAAAAAATAGATAACGTAATTTTTAGACAGATAATTTGT TGAAATATGCGGTGATTTTTGGAAAAGATTAAGTAATGTTCAAAAAGCAT AACATATTATCATTACACTAGCTCAGCAATTTTTCACAGTAATTCGAACC TTAATACAAGTATCAAAACCTGGCTTTAATAAATTTTTCACTAATTCATT TATCCTTATTTTATTTAGTTGGTGAGGCAACAGCGGGGGTTGTAGCAGCC GTACGGAGTGGTGCATCTATGACCGAGGAATCTCGTAAGTAATGATAACA TTATTAAAGTGACATGCTCCGAAAAATTTAAAACCTTTTAGACAGCAAAG GGATTGTTTCCACGAAGGGCCGCTAAAGTTTTTTCAAAGTTATTTTGCTG AAACTTTTTAATAGTTTTTATTTGGTTAATAGGTAAAGACTGATGGTGAA TGCGAGGGCAAAATCCCCAAAAAACATTCCTCTGTTTGTTTGTTTGTTTT CAGAATAGTCTGAACTGGAGCCCAATCCTCTTGTGGAGTTAGTGTTGACA GGTGTATTTAGTCCACGTTTTTCATTAGAATTTAACAATAATCTTAAATT TGAGACACAACCTCTATATACAGCCCCTTGTCACACCCGGTAGGATTTTT TTCAGCCAGTGGGGGTAAAAATAATAGACCAAAACTTGATTGGGATTTAT GTAACTGCAGGAGAGCCGGACGTGATACTTTACGGTTTCGGACGGTAATA TATTTTGCTAAAATAGATAAAGGTACAGTTCTTAAGTACAAATCAAACCT GAGAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNTGTGTCGTAAATCTCAGTGAAAAA TTGATCATTTTCATCATTATTCATGATGTTTTGGACTAGATTTATGAGAA GTTTGATGCATACTGGCTCTCTAACATGTGGAAAGACTTTGGAGCAATTT TGGCCATGAATCGTCAGCTGATCGAGTGCTAAAAAATCTTGCATATGCTA TGGTAAACAAAACCATAAAATTCTGTAGGTGTAACTTGACAATGAAACTT TCAAACACACATCCATTGGAATTTAAAAGAGAATACTAAAATTACAACAT TACAGTGAAAATTTGAAAACGATCTGAGTAGTTTTTNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNATTCAATAAAGGATACTAAAACACAATTCCAGTGTAA ATTTGAACAAGAATGGAGAAATCTTCACAGTTTTATGGCTGAAAATGATC GTTTTTGGACTTCTTGCCGTATAATTTTTTCATCGCGGCTTGCGACCATT CCTTTTGATTTTTCAAACCCGACACAGATTTTTTACAAACATATGACTAT GAGCATTCAGTAAAGGATACTAAAACACAATTCCTGTGAAAATTTGAACA AGATTGGAGAAATTTTCAGTGTTATGGCTGAAAATGATCGTTTTTGGACT TTGTTGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATTCC TGTGTAAATTTGAACAAGATCGGAGAAATTTTCACAGTTTTATAACTGAA AATTATATTTTTTGGACTTTGTCGTAATTTCATTGGCTGGGGCGACCATC CCTTTTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAGTTTGTGGG CAACATTCTAACAAAACTAACTCAACAAGCTCATCTTTCACATCTTTGAA TCTCTTAAGCCGGAGCTTCCAGCGCAGCTGGTTTATTACAAATTTCAATC TTTTCATAAAATCTCCGATTCCCTCTGTTTGCTCAGACACTTTTTCTGAA GAGATTACAAACTCTTGATAACACGATACGTCCGTGATTTCGTCATTTCT TGAACTTTCAAATAGATTCTTAGTTTCAATACCAGCAACGAGCCAACAAG AAGTTTGTCCAAATTTATAGGAGGCCTTCTGTAAGGAATTACCAACAACA ATTTTTGGATCGGACAAAGACACAGATTCAAAAACATTCGCGATTCGAAC ACAAGGGCGACAAACTACGTTAACGCAAGCACGTGACAACTTTTCGACTT TAGGAACCACTGTTTCAACGGCATGTGGCGAGATATGCTCTGCGATTCTA ATTTCTGGGAGTGGTACAGCGATGACAGTCTGACGACCTAAAATTCGTTC TGGAAGCGATTCCAAAATTTTAAGGGCAGCATCAATAAAACTCTTACCGA ATCGGACTTCAACATGATCATTTGTAAACAGGCTTTCGCAATCGGAATAG AGTCTTGCGTAGTCGTCTAGAGTTGTCAGCAGTCTTTCTCGTTCACAACC ATAGGATAATACATTTTGCACAAGGTCTTCCTTTCTGCTATAGATTTTTT GCATTTGCTGCGTAGAGTTCATGATGATATCAACAAATCGATTTCTTTTC ACATAAAAGTCTTCTTCTGATAGATTCGTCATCGTGATGAATAAGTCTTA CGTTACCTTCGTAACAACAACTCGATAACTTTATGCTGGGAGTTATTGAA CCAACACACCGATTACGTGTAATGTTGCACTGCAAATTCGTGTTTCTCTT CTTTCAATGGATACTTGTTTACTGGTGCAAGATACCNGTGTCACATAATT ACGTAATAATTGACAAATAAATAGACAATACACTGACGATCAAATTAACA TAAAAATATACAAAACAACTGCTATTCGGCAGTTACAATTTATATTCCCA TGTTTTATACGGCTGGGGATTTGAATTCCATTGTTTTTTGAACCAGAAAA AACAGTGGGGATGGAAAAAATAGCACAATATTTTTCAGTGAGGATTTGCT TATCTGATTTTTTCAGCGGGGACAAAATTTAGAGTATAATTTTTCAATGG GGACGATATTTTGGCCTATTTTGCCAGTGGGAAGGGTTCCTAGGGTCTGT GAGAAGGGGTTATCTATATGAATTTAAAANTTTTTCAATGGGGACGATAT TTTGGCCTATTTTGCCAGTGGGAAGGGGTCTGTGAGAAGGGGTTATCAAT ATGAATTTAAAAATGACATAATGCTGATGCCAACCCTTTTCTTTCTTTTT GTTTCTTTCAGAGACCGTTCCTGATTATTCGAAGATGTCTTTAACACAAG CCAAACGATACGAGATGGACAGCCAGGTAGGTTTATTTACAACTGACTCT CTCGCTTATTCGAACTCGGATTGGGAATCTTATTTGCTCGAGTTTCAGAG AGATTCAAATTATAGAAAGTATTTCCTCGACGGAGACTGGGAAATTAGTC TGAATTATAGAAAGACTCGAATATAATTTTGAATAAGCGAGAGTCTACTG TGTTTACAATTGACTTGAAAAGACGCACCATTGTACCCTTTTGCTGAGTA GGGCCAACGTCCCTTTCCCTTAGGATTGGGATCACAGGCAAATCTTTTGT AACTACTCTTAGGTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGCGGGGGGGGGG GTTGGAAAATTTTCGAAAAATTAACAAGTGGAGGGGCCCGTTTATTTGGC ACCTAAGAGTAACGGTGGAATACCATTGAGCTGGCATATTTTTCAAAGCA TCCAGAAAGATTTAGAAATGAGATTGAAGAGAGCTTTAAGAACGGTGAAT TCCATGCAATTTCAGTGTAGTGTAGAGATTTTGAAAATTAAAAGAGTTTA GCAAACCTTTCTAACGGGGATGATTGTATCGCACGGCTTTTCTTTTTACA ATCCAGGTCAAAATTTTGGAGTTGGAAGACAAATTACAGAAAGAGCGGCA AAATTTGGGACGGTTACGTCAAGCACATTATCAAATCGCTGTCGAGATGT ATGGTGAAGATGCTGTGAGTAAAAGCGAATAGAACTTTCGTTTTGAAATT CAGTCGTGATTGTGAATCTGTTCATGTAATCAAATTGATTCATTCATTCA TTCATTCGTTTATTCGTGCATTCTTTCATTCATTCATTCATTCATTTATT CGTGCATTTTTTCATTTATCCATTCATTCACTCGTTCATTCATTCAATCC TTTATTCATTCATTCATTCATTTATTCAATCCTTCATTATTTCATCCATT CGCACTTTTATTGACTTGTCTGTTCATTCGTTTTTGCTTTTCTTTCATTC ATCATTTACTGAATCATTATTATGATTACGTCTATGTTATACCCATGATA GTAGGGGGAAATTTGTAAATTCGCTCGATTTTTTTAGTCAAAGCACTTGT TATACATTTTTGGAAAGCTAAGGGGTAGGAAAATCAAAATAATTTGGGTG CCAATTTTTTTTCGGACACTTTGGTGTGATTTTCGGACAAATATGACGGT CTCGGACAAAAATTATAGGGTAAAAAATTAATGAAAATTTTAGCTTGAGA AGATAGAGACCTGTAGTATATTTTTAGAAAGCCCTCAAAAAATTAGAATT AGTGATATATTGTGAGTGCGAGTATAGGTGATTTCAGTACCTAACTCAAG ATATTGAGCATCCAAAAGCTGGACAAAACAGCTGTTTCTGGCTGAAAAAC ACTGTTTTTAAGGGTTAATATCTCGAGTTAGGTACAGAAATCACCTATAC TTGCAATCCAATATATCTCTAATCTTCATTTTTTGAGAGCTTTCCAAAAA TATACAACAGGTCTCCGTTTTCTCAAGCTAAAATTTTCATTAATTTTTCA CCCTATAATTTTTGCCTGAGACCGTCATATTTGTCCGAGAATCACACCAA AGTGTCCGAAAAAAAACTGGCACCCAAGTTATTTTGATTCCCCCACCCTT TAGCTTTCAAAAAATGTATAACAAGTGCTTTGACTAAAAAAATCGAGCGA CATAAAAAAAACGAACAAATTTTCCCCTTAGTAAAAACATGCTCGAATTA ACATTAAAACCATTTTCACCTTTTTCAACTTCTAGGTCACCATGGATTAA CGCTG

Coding sequence (CDS) from alignment at scaffold_286:392761..403315-

>TCONS_00057250 ID=TCONS_00057250|Name=TCONS_00057250|organism=Clytia hemisphaerica|type=CDS|length=4704bp|location=Sequence derived from alignment at scaffold_286:392761..403315- (Clytia hemisphaerica)
GTCACCATGGATTAAGTCAAAATTTTGGAGTTGGAAGACAAATTACAGAA
AGAGCGGCAAAATTTGGGACGGTTACGTCAAGCACATTATCAAATCGCTG
TCGAGATGTATGGTGAAGATGCTAGACCGTTCCTGATTATTCGAAGATGT
CTTTAACACAAGCCAAACGATACGAGATGGACAGCCAGTTGGTGAGGCAA
CAGCGGGGGTTGTAGCAGCCGTACGGAGTGGTGCATCTATGACCGAGGAA
TCTCGTTGCAGCATCTCGAGTGAAAGCACACAAAACAAGTACACGACTTC
CACCACTCATGACTGCATCCAAAGGAGAGATGCAGCTGATAAGGTGATCG
AACGAAAAGGGAAATTCGAAGAGTTGGTTGTTTCGTCACATGAAATTGCT
GCTTCGACCGCACAACTAGGTTCGGCGTCGGTGAAAGACTTTTACAAACG
GCATCATAAATGGACAGAGGGATTACTGTCAGCAGCTAAATCGGTTGGTT
ACGGAGCTACAATTTTAGTATGAAAGCAATCCGAGAATTAATTTTGAAAT
CCAAAGATCTTCAGGACGAAATTGTGTCTGAAGGAAGAGTCACCATGGAT
TAAGTCAAAATTTTGGAGTTGGAAGACAAATTACAGAAAGAGCGGCAAAA
TTTGGGACGGTTACGTCAAGCACATTATCAAATCGCTGTCGAGATGTATG
GTGAAGATGCTAGACCGTTCCTGATTATTCGAAGATGTCTTTAACACAAG
CCAAACGATACGAGATGGACAGCCAGTTGGTGAGGCAACAGCGGGGGTTG
TAGCAGCCGTACGGAGTGGTGCATCTATGACCGAGGAATCTCGTTGCAGC
ATCTCGAGTGAAAGCACACAAAACAAGTACACGACTTCCACCACTCATGA
CTGCATCCAAAGGAGAGATGCAGCTGATAAGGTGATCGAACGAAAAGGGA
AATTCGAAGAGTTGGTTGTTTCGTCACATGAAATTGCTGCTTCGACCGCA
CAACTAGGTTCGGCGTCGGTGAAAGACTTTTACAAACGGCATCATAAATG
GACAGAGGGATTACTGTCAGCAGCTAAATCGGTTGGTTACGGAGCTACAA
TTTTAGTATGAAAGCAATCCGAGAATTAATTTTGAAATCCAAAGATCTTC
AGGACGAAATTGTGTCTGAAGGAAGAGTCACCATGGATTAAGTCAAAATT
TTGGAGTTGGAAGACAAATTACAGAAAGAGCGGCAAAATTTGGGACGGTT
ACGTCAAGCACATTATCAAATCGCTGTCGAGATGTATGGTGAAGATGCTA
GACCGTTCCTGATTATTCGAAGATGTCTTTAACACAAGCCAAACGATACG
AGATGGACAGCCAGTTGGTGAGGCAACAGCGGGGGTTGTAGCAGCCGTAC
GGAGTGGTGCATCTATGACCGAGGAATCTCGTTGCAGCATCTCGAGTGAA
AGCACACAAAACAAGTACACGACTTCCACCACTCATGACTGCATCCAAAG
GAGAGATGCAGCTGATAAGGTGATCGAACGAAAAGGGAAATTCGAAGAGT
TGGTTGTTTCGTCACATGAAATTGCTGCTTCGACCGCACAACTAGGTTCG
GCGTCGGTGAAAGACTTTTACAAACGGCATCATAAATGGACAGAGGGATT
ACTGTCAGCAGCTAAATCGGTTGGTTACGGAGCTACAATTTTAGTATGAA
AGCAATCCGAGAATTAATTTTGAAATCCAAAGATCTTCAGGACGAAATTG
TGTCTGAAGGAAGAGTCACCATGGATTAAGTCAAAATTTTGGAGTTGGAA
GACAAATTACAGAAAGAGCGGCAAAATTTGGGACGGTTACGTCAAGCACA
TTATCAAATCGCTGTCGAGATGTATGGTGAAGATGCTAGACCGTTCCTGA
TTATTCGAAGATGTCTTTAACACAAGCCAAACGATACGAGATGGACAGCC
AGTTGGTGAGGCAACAGCGGGGGTTGTAGCAGCCGTACGGAGTGGTGCAT
CTATGACCGAGGAATCTCGTTGCAGCATCTCGAGTGAAAGCACACAAAAC
AAGTACACGACTTCCACCACTCATGACTGCATCCAAAGGAGAGATGCAGC
TGATAAGGTGATCGAACGAAAAGGGAAATTCGAAGAGTTGGTTGTTTCGT
CACATGAAATTGCTGCTTCGACCGCACAACTAGGTTCGGCGTCGGTGAAA
GACTTTTACAAACGGCATCATAAATGGACAGAGGGATTACTGTCAGCAGC
TAAATCGGTTGGTTACGGAGCTACAATTTTAGTATGAAAGCAATCCGAGA
ATTAATTTTGAAATCCAAAGATCTTCAGGACGAAATTGTGTCTGAAGGAA
GAGTCACCATGGATTAAGTCAAAATTTTGGAGTTGGAAGACAAATTACAG
AAAGAGCGGCAAAATTTGGGACGGTTACGTCAAGCACATTATCAAATCGC
TGTCGAGATGTATGGTGAAGATGCTAGACCGTTCCTGATTATTCGAAGAT
GTCTTTAACACAAGCCAAACGATACGAGATGGACAGCCAGTTGGTGAGGC
AACAGCGGGGGTTGTAGCAGCCGTACGGAGTGGTGCATCTATGACCGAGG
AATCTCGTTGCAGCATCTCGAGTGAAAGCACACAAAACAAGTACACGACT
TCCACCACTCATGACTGCATCCAAAGGAGAGATGCAGCTGATAAGGTGAT
CGAACGAAAAGGGAAATTCGAAGAGTTGGTTGTTTCGTCACATGAAATTG
CTGCTTCGACCGCACAACTAGGTTCGGCGTCGGTGAAAGACTTTTACAAA
CGGCATCATAAATGGACAGAGGGATTACTGTCAGCAGCTAAATCGGTTGG
TTACGGAGCTACAATTTTAGTATGAAAGCAATCCGAGAATTAATTTTGAA
ATCCAAAGATCTTCAGGACGAAATTGTGTCTGAAGGAAGAGTCACCATGG
ATTAAGTCAAAATTTTGGAGTTGGAAGACAAATTACAGAAAGAGCGGCAA
AATTTGGGACGGTTACGTCAAGCACATTATCAAATCGCTGTCGAGATGTA
TGGTGAAGATGCTAGACCGTTCCTGATTATTCGAAGATGTCTTTAACACA
AGCCAAACGATACGAGATGGACAGCCAGTTGGTGAGGCAACAGCGGGGGT
TGTAGCAGCCGTACGGAGTGGTGCATCTATGACCGAGGAATCTCGTTGCA
GCATCTCGAGTGAAAGCACACAAAACAAGTACACGACTTCCACCACTCAT
GACTGCATCCAAAGGAGAGATGCAGCTGATAAGGTGATCGAACGAAAAGG
GAAATTCGAAGAGTTGGTTGTTTCGTCACATGAAATTGCTGCTTCGACCG
CACAACTAGGTTCGGCGTCGGTGAAAGACTTTTACAAACGGCATCATAAA
TGGACAGAGGGATTACTGTCAGCAGCTAAATCGGTTGGTTACGGAGCTAC
AATTTTAGTATGAAAGCAATCCGAGAATTAATTTTGAAATCCAAAGATCT
TCAGGACGAAATTGTGTCTGAAGGAAGAGTCACCATGGATTAAGTCAAAA
TTTTGGAGTTGGAAGACAAATTACAGAAAGAGCGGCAAAATTTGGGACGG
TTACGTCAAGCACATTATCAAATCGCTGTCGAGATGTATGGTGAAGATGC
TAGACCGTTCCTGATTATTCGAAGATGTCTTTAACACAAGCCAAACGATA
CGAGATGGACAGCCAGTTGGTGAGGCAACAGCGGGGGTTGTAGCAGCCGT
ACGGAGTGGTGCATCTATGACCGAGGAATCTCGTTGCAGCATCTCGAGTG
AAAGCACACAAAACAAGTACACGACTTCCACCACTCATGACTGCATCCAA
AGGAGAGATGCAGCTGATAAGGTGATCGAACGAAAAGGGAAATTCGAAGA
GTTGGTTGTTTCGTCACATGAAATTGCTGCTTCGACCGCACAACTAGGTT
CGGCGTCGGTGAAAGACTTTTACAAACGGCATCATAAATGGACAGAGGGA
TTACTGTCAGCAGCTAAATCGGTTGGTTACGGAGCTACAATTTTAGTATG
AAAGCAATCCGAGAATTAATTTTGAAATCCAAAGATCTTCAGGACGAAAT
TGTGTCTGAAGGAAGAGTCACCATGGATTAAGTCAAAATTTTGGAGTTGG
AAGACAAATTACAGAAAGAGCGGCAAAATTTGGGACGGTTACGTCAAGCA
CATTATCAAATCGCTGTCGAGATGTATGGTGAAGATGCTAGACCGTTCCT
GATTATTCGAAGATGTCTTTAACACAAGCCAAACGATACGAGATGGACAG
CCAGTTGGTGAGGCAACAGCGGGGGTTGTAGCAGCCGTACGGAGTGGTGC
ATCTATGACCGAGGAATCTCGTTGCAGCATCTCGAGTGAAAGCACACAAA
ACAAGTACACGACTTCCACCACTCATGACTGCATCCAAAGGAGAGATGCA
GCTGATAAGGTGATCGAACGAAAAGGGAAATTCGAAGAGTTGGTTGTTTC
GTCACATGAAATTGCTGCTTCGACCGCACAACTAGGTTCGGCGTCGGTGA
AAGACTTTTACAAACGGCATCATAAATGGACAGAGGGATTACTGTCAGCA
GCTAAATCGGTTGGTTACGGAGCTACAATTTTAGTATGAAAGCAATCCGA
GAATTAATTTTGAAATCCAAAGATCTTCAGGACGAAATTGTGTCTGAAGG
AAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036064XLOC_036064Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057250-exon-scaffold_286-1575043694:403088..403315TCONS_00057250-exon-scaffold_286-1575043694:403088..403315Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1575043694:402658..402758TCONS_00057250-exon-scaffold_286-1575043694:402658..402758Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1575043694:402129..402219TCONS_00057250-exon-scaffold_286-1575043694:402129..402219Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1575043694:401682..401754TCONS_00057250-exon-scaffold_286-1575043694:401682..401754Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1575043694:399582..399647TCONS_00057250-exon-scaffold_286-1575043694:399582..399647Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1575043694:394990..395054TCONS_00057250-exon-scaffold_286-1575043694:394990..395054Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1575043694:393852..393959TCONS_00057250-exon-scaffold_286-1575043694:393852..393959Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1575043694:392761..392780TCONS_00057250-exon-scaffold_286-1575043694:392761..392780Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1510915933:403088..403315TCONS_00057250-exon-scaffold_286-1510915933:403088..403315Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1510915933:402658..402758TCONS_00057250-exon-scaffold_286-1510915933:402658..402758Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1510915933:402129..402219TCONS_00057250-exon-scaffold_286-1510915933:402129..402219Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1510915933:401682..401754TCONS_00057250-exon-scaffold_286-1510915933:401682..401754Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1510915933:399582..399647TCONS_00057250-exon-scaffold_286-1510915933:399582..399647Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1510915933:394990..395054TCONS_00057250-exon-scaffold_286-1510915933:394990..395054Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1510915933:393852..393959TCONS_00057250-exon-scaffold_286-1510915933:393852..393959Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1510915933:392761..392780TCONS_00057250-exon-scaffold_286-1510915933:392761..392780Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1491911889:403088..403315TCONS_00057250-exon-scaffold_286-1491911889:403088..403315Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1491911889:402658..402758TCONS_00057250-exon-scaffold_286-1491911889:402658..402758Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1491911889:402129..402219TCONS_00057250-exon-scaffold_286-1491911889:402129..402219Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1491911889:401682..401754TCONS_00057250-exon-scaffold_286-1491911889:401682..401754Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1491911889:399582..399647TCONS_00057250-exon-scaffold_286-1491911889:399582..399647Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1491911889:394990..395054TCONS_00057250-exon-scaffold_286-1491911889:394990..395054Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1491911889:393852..393959TCONS_00057250-exon-scaffold_286-1491911889:393852..393959Clytia hemisphaericaexon
TCONS_00057250-exon-scaffold_286-1491911889:392761..392780TCONS_00057250-exon-scaffold_286-1491911889:392761..392780Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057250-proteinTCONS_00057250-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_286supercontigscaffold_286:392761..403315 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0.674992 tpm) - - (21.2161 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.89766 1.62489 4.95331 11.3471 20.5069 21.2161 11.4833 15.3118 9.01154 10.792 6.2051 6.73245 8.37334 7.05736 9.77944 9.12374 8.66733 8.16018 10.4241 10.2839 4.54993 1.55535 6.14026 3.30519 8.13513 5.85215 3.48303 3.81485 4.7073 0.674992
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002558ILWEQ_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003779 actin binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057250 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
100200300400500600700Expect = 3.16e-64 / Id = 63.54SequenceHIP1
Match NameE-valueIdentityDescription
HIP13.157e-6463.54Huntingtin-interacting protein 1 OS=Homo sapiens G... [more]
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