TCONS_00058012 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058012
Unique NameTCONS_00058012
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length827

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058012 ID=TCONS_00058012|Name=TCONS_00058012|organism=Clytia hemisphaerica|type=transcript|length=827bp
CCAAATATCACATAGAAACCGTGTATCAAATAATTTGGAAAGTTAcatac
tttctttttcaaatgagCGTTTCCATGAAAATCTGAGCCACGCTCCTTCA
TCAGACTACAAAAACCAGAAAACTAAGAAACAAAGTAAAGACAAAGATGG
AATTTGAAGAAGTCTCTAAGAAGAGCACGAAAAAGTACAAAAATCAGATG
TCAAAAGACCAGCCAATCCACCTGTCAACAAGGAACTTCAAAACGCCATC
CATCTCTCCTGAAGTTGATCTCACATGGTTTCTTCTACTTGGTGTGGCAT
CTGCTGTGCGTTTATACAAGTTATCAAAGCCAAATGCTGTTGTATTTGAC
GAGCTACATTATGGAAAGTTCACATCATATTTTGTGCAAGAGCGGTTTTT
CTTTGATGTGCATCCTCCACTTGGAAAATTGCTCTTTGCAGCTGCAGGAT
ACTTAACTGGTTTTGACGGATCTTTTAACTTTCCAAAGATTGGTGAAGAG
GTGCCAGACTCTCAAGTGCAAAGTGTTATGTATTTGCGAATGGTGACAAG
CTTCTTCAGTATTTTTCTGGTGCCATTGATTTACGAGATTGTATTGGAAC
TTTCGAGTAGTTACTGGTTTGCTGTAGTTGGTGCCCTACTTGTTTGTTTT
GGTAggaaaaatttgataatttgCCTTGGTGATAcatttttcctttaaaa
ctgTTAGGCGAGAgtaatttgattagttgttttacgggcctgaCCGACCT
GGACCAAccttgaaattccaaaaattgaagtaaaaataaaattgatttta
gttgtccttttttattttcattgctct
Run BLAST on NCBI

protein sequence of TCONS_00058012-protein

>TCONS_00058012-protein ID=TCONS_00058012-protein|Name=TCONS_00058012-protein|organism=Clytia hemisphaerica|type=polypeptide|length=183bp
MEFEEVSKKSTKKYKNQMSKDQPIHLSTRNFKTPSISPEVDLTWFLLLGV
ASAVRLYKLSKPNAVVFDELHYGKFTSYFVQERFFFDVHPPLGKLLFAAA
GYLTGFDGSFNFPKIGEEVPDSQVQSVMYLRMVTSFFSIFLVPLIYEIVL
ELSSSYWFAVVGALLVCFGRKNLIICLGDTFFL
Run BLAST on NCBI

transcript from alignment at scaffold_303:23114..33775-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058012 ID=TCONS_00058012|Name=TCONS_00058012|organism=Clytia hemisphaerica|type=transcript|length=10662bp|location=Sequence derived from alignment at scaffold_303:23114..33775- (Clytia hemisphaerica)
CCAAATATCACATAGAAACCGTGTATCAAATAATTTGGAAAGTTACATAC TTTCTTTTTCAAATGAGCGTTTCCATGAAAATCTGAGCCACGCTCCTTCA TCAGACTACAAAAACCAGAAAACTAAGAAACAAAGTAAAGACAAAGATGG AATTTGAAGAAGTCTCTAAGAAGAGCACGAAAAAGGTTGGTAAGAATGAG CATTTAAAAACCATGACAGGAAAAATTTATTTGATTTAGGCTACAGCTAC CATGCCATGCTACCATCCAAATTTCCCTGCTGACTGAATGGTTGGCAGAC GATATCATCCACCAGGATGCAAGTGAAATTTTTCAATCCGCGGACCTAGA CGGGGGTTCGGTTATTATCAGTTAGGGTTAGGGTTGGAGCTCNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNTTCAATTTCATGTTATTCAATCCAGTCCACTCATAGACTG CGTTCATGTCATCTTGGAGCTGAATGTATAGCCCTCAAATGAAAGACAAA GACCTGGCTGGTCATTAAAATACAAAGTTAAATCAGCCAACAATTTCTTT CGTTCAAAATATATTTTCCAATATTCAGATTTTGGAAAAACAGAACATCA AAATTTCCTGATTTTGGAAAATTGGAATGAAAAATTCCCCAATTTTCCAA TTTTGAACAATGTGAGAACCGGGTAACTTGCATCAGAGGCTAACATGTAT AGCCCTCAAATGAAAGACCTGGCTGGTCATTAAAATACAAAGTTAAATCA AAACAAAAATGGTCGATTAAAGCTGCGAGCAGAGCTGCGTAGATGTATTT TAATAGACCTTTTTTCAAAGAGGACGTCATNACGAGCGGAGCTGCGTAGA TGTATTTTAATAGACCTTTTTTCAAAGAGGACGTCATGTTGAATAATTAT GTAGTCCAGCCATAAAAACAATGATAGAGCCATGCATGATTACTATATCG TGCATATTGTAATAATTATGCATGGTTTTATCATTGTTTTTCTGCTGGAC TACATAATTATTCAACAGGGTGGCCTCTTTGAAAAAAGTTCTATGACCAG CCAGGTCATTCATTTGAGGGCTACCGTGAGTGGTCCTAAATCAGATAGCC CTACCTAAATCCAATGGGGTCTTTCGAAGATACAAACTAAAATAAAAAAC AAATCTTTCGCTGTGACGCAATGAAGATACCAAAGTGTAAACTAAACTGA GAGATTTGATACACTGAACCAATTGAACCAATACATTAAAAATTACTTCT TATAATATAATTTTTTATTACAAAATTGTTAACGTTTTAAACGCAAGCAA CAGATTCAGAATAGTAGAGGCAATTATTTTTACAACTCACACTATTTTTA TCACCTTAATTGACATCATGACATTTTAGTCATCTTATTAGACGTTTTGT TTCGAGAGTTCTTGCAATATAGTTTATTACTCAACTTGGAGAGGGAATNT GTTTTGTTTCGAGAGTTCTTTCAATATAGTTTATTACTCAACTTGGAGAG GGAATGTTTGTAAACACAGAAATTTTTTCATAGCAGGTCGGATTTAGGCA GGGGTGTCGGATTTAGGACCACTCACGGTATGCATGTTAGCAGAGGACCC TGTCGACGCAACTGACTTAAGGAACACCGGACACGCGAAAGTCGGTGTGA AATGACAATTTTTTTACCACCGGACATTCTCTACACCGACTTAAGGAAGT CGGATGTCCGGTGTCGGAGAAGGATATTTTTTTCCGCCAGACAATCAAAA CACCGGACATGACCAGTCCAGTGCGTCCTGTGTTTCTTAATTTTTTGTTT CATAAATGTCCAGCGTCCAAAATTCCCTGTATGCAACACCGGACTGACGC CGGTGTAGCAAAAGGATACTTTTTGCCACCAGGCAAATACACCGGACAGT CCGGTGCGTTGGCAGGGTCTTGTTAGCGGCCTCCACTGATGCAAGTTACC CAACCTCACGGTATTGGGGAAAGTTTTTCAACTTTGCTTGGTTTGGAGCT CTCTCGCTTTTTAATGAGGTGAAGTTAACAGCTACCATCAACTGCTTTAA CTTGGGACTATCTGTCAAAACATGGGAAGGCAATTCGGCCACCATTTAAC CTCCAAAGTTAGGCCGACTCTAAAAAAAAAAGTTTCCGGTCCACCGGCCG GGTGAAATTTTTTTTCGTTGTCACCCGACCGCATTTTTTTTCATAAGAAC CAAATAGATAACAGAGGAAACTTTCTTCTTAAAAACCTTTACTCATTTAA ACTCCCAGCTGGCACACAACGTTGTTTCGACGTTTATATAACGTTAAAAA GACGTTATGAAAATTAGATGGACGTTGAAACAATGTTGTGTGCCAGCTGG GCTGTTTCATCGTTCTCGTTGCTATAAAACACTTAAAAAAGTTTGTTTGT TTAGCATGACAGCATGCTTTCTGGACATTATGGATCAAATAAATAGTGTT ATGCATTTTAAAATGAGCAAAGAAAATCTTTCTTTGTCTAGGATAGGAGG ATTTCTGAACGTTAAAGATCAAATAGATAGTGTTATGCATATTAAATGAG TGAAGAAAATCTTTGTTTGTCTAGGAGGCTTNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNTTTAAAACCCTTTCGACCCATCAGTTTCAAAATTTATGTGTTTAA TTACTGAAAAATGCTCTTGATCGTGTAAAGGCTATTGCGATTGCCAAATT TAAAATAGAAATTTGATAGGTCGATTTGTAACGTTTTCGGGCACTTTCTG AAAGTAACTTTTTTATTCAATTGAGCATAACTTTTGATCTAAAGAACTGA ATCAGATAAATGACCCATCAAAATTTAAGTTTATATTTCTTCTTTCCAAT GGAATAGGCAAAATTTTATATTTCAAGCAAATCAGTTTCAAAGAGAGAAA CTTTTTTGTGGCGCATCCGGTAGCTAAGCGCACCTCTCTTATTCATTATC TAAGAATTGAAGCGACAAAAGTTATTTGAAGATATATTCAGTTATAATCC AAGGTAGAACAATCTAAACATAGAAAGGGGGTATTTTTTAGTGCTCTTTA CGATGATCGGTAGTTTTTTTGGATTCTATGTTTAGATTTTTCTACCCAGC CCCGTTGCTATGTACGCGCGCCCTGTTGCTAAGACCTATGCTTGAAATCG AAAGCGAAACCAAGATAATTTAGCGCACACTGCCGTTTTGCGTAATATCG ATAAAGTGAAAGGAGGTCCTGACTGAAGTTTGAGCAGTTGACGCTATGTA TGTATCCTTCATAGGGACTATCTTGGGACTATCTGCCCTGGTTCTGCAAA GTACCGTAAGTTGGGGTCTGATATCAACATCCCTCGTCTAAATTCAGACA CCTTTCTTTAGAGAAAGGAATATATAATATGAAAGGTTGAATCAATGATT GAAACAGGATTATTCCTCTCACTGACCACTAAGCAAGAGGATGTCGGAAT TAGAGGAGGGGTGTTGAAATTAGACCAAGTTAGGGTAGGTAGAGTGATTT TTTAAACAGCTTTACTCAGAAGGTTTTATCTTTAAAACATTTAAAAGACT AGATAGTTGCTATGACAAACAGTTTTAGTCACATTAGGAAATCAAGGTTT CAGAAATAACAACATCAGTCATCTACAGAATGTATTTGAAACAAGGGTGA GAATTACCTGAATCAAGTTGAAGATCCCAAGACAATTAATAAAAATCGAA AGCTTGAAACAAAACATAATGTCCAATTAGACCACTCACAAATAAGTTGT GTTCGCATCCTCCAACCGACTCACTTTCCTCATCTTAAAAATCCTACCCT TTTCTAGTTGGAAAGTCGGAAAATTTGTGAGATCTTTTAGCAATATTATT CAAAGAATTTAGTAGATTCAGTGTAACCAGTGTTTTGATTATCGATTATA TATTGTTTTTAAGATTTCTATCCGCAATTTTCAAAGATTTTTGCGCTACG CAACTCGTTTTTGCGCAGTTGCGATATGCAAAATAATCACATTGCAGCTC ACGCGCTCTATAATTCTTGTCGCCTGAACAAACCTTTTCCAATGATTTTA GCACCACCTGACACTACTAGATCTAAAAACATCAATTGTGGACACTGTTG ATGTTTTTTATCCACAGTAGATCATTTTTATGGACAGTTTTTCCTTTTTC TTGACAGTTGATGTCTGGAAATAGACAGCCAATACTTTTAATGAACTGTC AAGATTATTTAATTGACTGTCAATATCTGATATTGACTGTTGATGTCTGA TATATTGACTGTCGATATCTGATATTGACTGTCGATAGCTTTTATCTTGA CTGTTGATGTCTGCGATCTTTTATATCAATCGACAGTCAATTAAATAATC TTGGCAGTTCATTAAAAGTATTGGCTGTCTATTTCAAGACATCAACAGTC AAGAAAAAGAAAAAACTGTCCATAAAAATGATAGACTGTGGATAAAAAAC ATCAACCGTGTTCACAATTGATGTTTTCAGACCTAGCAGTGTGACTGCCT ATATTCAGAGCGCATTTTTCCGATGATTTAAGAAACCAACCAACCGACTC ATATTTTGGGGCTGTCAGTCAGGGAAATCCCTCAATTGCAGTAGTAATTT TTTACTGCAATTGCGGTATAAACATCACTTTTACATTTTTCATATATACC ACAATTGCAGTATATTCAAGAAACAGAATTCAAGATTGAAGTTTTCTAAA AAATTCCTTTATCTGACAGATCAAATCGGGTCGGGAGAATAAAAATTGAT TTCATTGATTTCAATTTATTATCATTTAATTTTTGCAATTTATTTTTGTC AGCAAATCTGTAAACCAGAAAATAAAAAAGTAATTTCCCAATGAAACACT TAAAATTTAGGAAGCAAGTCCTTTAAGAGATCGCACTAACATTTTTGTTT GGCGTTAACTCCAGCTCTTTTTGCCGTCAATTTTTATTGTCACAAATGAA TTCCTTTGAAGTAAACAAAAGAAAAAAACAACTGGAGTAAAGGTCTATTG GAATGGTGGTGCAATCTCATAAAGGACTACTTGAGTTCGATTAGTTTGTT CAGTACAAACTGTGATAAGTTAATTTCCAATCACCTCTTCCTTCACTTGC AAAAATTTAAAACCACAGACATTGTCCATGAAAAGTTACCATTTTGACAT TATCCAAACTTAAGGTTTCCTGGAATATTTATTTATCCACGGTCATATTA CAAATCTAGATTTCAGAAGTTTCTTATTTATCCCCTATCCCTATTAATTT CAGTACAAAAATCAGATGTCAAAAGACCAGCCAATCCACCTGTCAACAAG GAACTTCAAAACGCCATCCATCTCTCCTGAAGTTGATCTCACATGGTTTC TTCTACTTGGTGTGGCATCTGCTGTGCGTTTATACAAGTTATCAAAGCCA AATGCTGTTGTGTAAGATGATATTATTACTGTCATCATTATTTTGTAATT TGTCAGAAATGAAGATTCAAATAATCATATTCCCCCAAAGGACTAAACAA ACTTGTGTTATGACTTTGAGAATCTAAAAAGGAGAGTGATCATACAGTAA TTCTTATCTTATAGATTTGACGAGCTACATTATGGAAAGTTCACATCATA TTTTGTGCAAGAGCGGTTTTTCTTTGATGTGCATCCTCCACTTGGAAAAT TGCTCTTTGCAGCTGCAGGTATGACACCTTTTAAAAGTGCCAACTAGCTA GCTTGTTTTTTGATTGCCTGTCATAGATAGAGTCAATATTTTACATGGAT AGCTCAGTAATCTAGGACTTTTAGACAGTCTTTCGATTGTTTTCATGGGG TCCAAGGCCAGCTGGCTCGGCTATCTATGAACTGAACGGAATATTGAAAG GAGCAGGGATTCGAACTTCGAATTCCTTGACCGCTTGGCCATCGCTCCTC AAATGTTCATGAGTTCATCAGTCAATGAACAAAAATACCTAAGCATTGAT GATTCCAAAGAGTCGTTATTGGTGTATATTGCTTTTTTCAAGCTTTTTAA ACCTATCTAAACAATTGTAGAGAAATGGGCTACATTAGTTACCTGACCAA AACTTCCTTATTGAATCCTTTCATTGATCAGATTTATTACTTTTAAGATA GGATTCTGATTTTCTTTGCCAGGCTTCAGGGGAAGTGTTAAGTAACAGCC TTAACGTCTTTTTGCTCTAATATTCCACCATTTGCCATCAGAATTATAAG TTTACTTTGTAATATTTAATTTTTGCTTTTAGGATACTTAACTGGTTTTG ACGGATCTTTTAACTTTCCAAAGATTGGTGAAGGTAAAAGACTTTCTGTA CCATTAATTATTTAAGTTTTTTGCAGAAAATGAATGAAAAGGGCAAAACT GTGAAAGTTAGATTCTGAAATGCAATTTTGTATATTGTAAATCATATTTT TTTGGTCTTATCCTGACAGCCTTCTTGAAGATTTCCAGAGTACTTTTATT TTTATATTCTAGAGGTGCCAGACTCTCAAGTGCAAAGTGTTATGTATTTG CGAATGGTGACAAGCTTCTTCAGTATTTTTCTGGTGCCATTGATTTACGA GGTTTGTTAACTAAAACTATTGTTATATTTTGAAACCACTTAAGTGTCAT TGATATTTTGATAGAAGTGAACTATTTTGAATCATTTGATAGACCCTCGG ATACATTTTTTTGTAATGATACAGCTTTGATAAAGTTTCAATGCCCTTAA GAACAAACCAAGTGCAAAACAGAGAAAATTAAATAATAATAGCTGCATTC TTTTTCAGTGTTCAATATAAACTAATGTAAATACTTCTCTTGCACTAATG ATTTACATTTCTTATGTTTCAGATTGTATTGGAACTTTCGAGTAGTTACT GGTTTGCTGTAGTTGGTGCCCTACTTGTTTGTTTTGGTAGGAAAAATTTG ATAATTTGCCTTGGTGATACATTTTTCCTTTAAAACTGTTAGGCGAGAGT AATTTGATTAGTTGTTTTACGGGCCTGACCGACCTGGACCAACCTTGAAA TTCCAAAAATTGAAGTAAAAATAAAATTGATTTTAGTTGTCCTTTTTTAT TTTCATTGCTCT

Coding sequence (CDS) from alignment at scaffold_303:23114..33775-

>TCONS_00058012 ID=TCONS_00058012|Name=TCONS_00058012|organism=Clytia hemisphaerica|type=CDS|length=3312bp|location=Sequence derived from alignment at scaffold_303:23114..33775- (Clytia hemisphaerica)
ATTGTATTGGAACTTTCGAGTAGTTACTGGTTTGCTGTAGTTGGTGCCCT
ACTTGTTTGTTTTGGTAGGAAAAATTTGATAATTTGCCTTGGTGATACAT
TTTTCCTTTAAAGGTGCCAGACTCTCAAGTGCAAAGTGTTATGTATTTGC
GAATGGTGACAAGCTTCTTCAGTATTTTTCTGGTGCCATTGATTTACGAG
GATACTTAACTGGTTTTGACGGATCTTTTAACTTTCCAAAGATTGGTGAA
GATTTGACGAGCTACATTATGGAAAGTTCACATCATATTTTGTGCAAGAG
CGGTTTTTCTTTGATGTGCATCCTCCACTTGGAAAATTGCTCTTTGCAGC
TGCAGTACAAAAATCAGATGTCAAAAGACCAGCCAATCCACCTGTCAACA
AGGAACTTCAAAACGCCATCCATCTCTCCTGAAGTTGATCTCACATGGTT
TCTTCTACTTGGTGTGGCATCTGCTGTGCGTTTATACAAGTTATCAAAGC
CAAATGCTGTTGTATGGAATTTGAAGAAGTCTCTAAGAAGAGCACGAAAA
AGATTGTATTGGAACTTTCGAGTAGTTACTGGTTTGCTGTAGTTGGTGCC
CTACTTGTTTGTTTTGGTAGGAAAAATTTGATAATTTGCCTTGGTGATAC
ATTTTTCCTTTAAAGGTGCCAGACTCTCAAGTGCAAAGTGTTATGTATTT
GCGAATGGTGACAAGCTTCTTCAGTATTTTTCTGGTGCCATTGATTTACG
AGGATACTTAACTGGTTTTGACGGATCTTTTAACTTTCCAAAGATTGGTG
AAGATTTGACGAGCTACATTATGGAAAGTTCACATCATATTTTGTGCAAG
AGCGGTTTTTCTTTGATGTGCATCCTCCACTTGGAAAATTGCTCTTTGCA
GCTGCAGTACAAAAATCAGATGTCAAAAGACCAGCCAATCCACCTGTCAA
CAAGGAACTTCAAAACGCCATCCATCTCTCCTGAAGTTGATCTCACATGG
TTTCTTCTACTTGGTGTGGCATCTGCTGTGCGTTTATACAAGTTATCAAA
GCCAAATGCTGTTGTATGGAATTTGAAGAAGTCTCTAAGAAGAGCACGAA
AAAGATTGTATTGGAACTTTCGAGTAGTTACTGGTTTGCTGTAGTTGGTG
CCCTACTTGTTTGTTTTGGTAGGAAAAATTTGATAATTTGCCTTGGTGAT
ACATTTTTCCTTTAAAGGTGCCAGACTCTCAAGTGCAAAGTGTTATGTAT
TTGCGAATGGTGACAAGCTTCTTCAGTATTTTTCTGGTGCCATTGATTTA
CGAGGATACTTAACTGGTTTTGACGGATCTTTTAACTTTCCAAAGATTGG
TGAAGATTTGACGAGCTACATTATGGAAAGTTCACATCATATTTTGTGCA
AGAGCGGTTTTTCTTTGATGTGCATCCTCCACTTGGAAAATTGCTCTTTG
CAGCTGCAGTACAAAAATCAGATGTCAAAAGACCAGCCAATCCACCTGTC
AACAAGGAACTTCAAAACGCCATCCATCTCTCCTGAAGTTGATCTCACAT
GGTTTCTTCTACTTGGTGTGGCATCTGCTGTGCGTTTATACAAGTTATCA
AAGCCAAATGCTGTTGTATGGAATTTGAAGAAGTCTCTAAGAAGAGCACG
AAAAAGATTGTATTGGAACTTTCGAGTAGTTACTGGTTTGCTGTAGTTGG
TGCCCTACTTGTTTGTTTTGGTAGGAAAAATTTGATAATTTGCCTTGGTG
ATACATTTTTCCTTTAAAGGTGCCAGACTCTCAAGTGCAAAGTGTTATGT
ATTTGCGAATGGTGACAAGCTTCTTCAGTATTTTTCTGGTGCCATTGATT
TACGAGGATACTTAACTGGTTTTGACGGATCTTTTAACTTTCCAAAGATT
GGTGAAGATTTGACGAGCTACATTATGGAAAGTTCACATCATATTTTGTG
CAAGAGCGGTTTTTCTTTGATGTGCATCCTCCACTTGGAAAATTGCTCTT
TGCAGCTGCAGTACAAAAATCAGATGTCAAAAGACCAGCCAATCCACCTG
TCAACAAGGAACTTCAAAACGCCATCCATCTCTCCTGAAGTTGATCTCAC
ATGGTTTCTTCTACTTGGTGTGGCATCTGCTGTGCGTTTATACAAGTTAT
CAAAGCCAAATGCTGTTGTATGGAATTTGAAGAAGTCTCTAAGAAGAGCA
CGAAAAAGATTGTATTGGAACTTTCGAGTAGTTACTGGTTTGCTGTAGTT
GGTGCCCTACTTGTTTGTTTTGGTAGGAAAAATTTGATAATTTGCCTTGG
TGATACATTTTTCCTTTAAAGGTGCCAGACTCTCAAGTGCAAAGTGTTAT
GTATTTGCGAATGGTGACAAGCTTCTTCAGTATTTTTCTGGTGCCATTGA
TTTACGAGGATACTTAACTGGTTTTGACGGATCTTTTAACTTTCCAAAGA
TTGGTGAAGATTTGACGAGCTACATTATGGAAAGTTCACATCATATTTTG
TGCAAGAGCGGTTTTTCTTTGATGTGCATCCTCCACTTGGAAAATTGCTC
TTTGCAGCTGCAGTACAAAAATCAGATGTCAAAAGACCAGCCAATCCACC
TGTCAACAAGGAACTTCAAAACGCCATCCATCTCTCCTGAAGTTGATCTC
ACATGGTTTCTTCTACTTGGTGTGGCATCTGCTGTGCGTTTATACAAGTT
ATCAAAGCCAAATGCTGTTGTATGGAATTTGAAGAAGTCTCTAAGAAGAG
CACGAAAAAGATTGTATTGGAACTTTCGAGTAGTTACTGGTTTGCTGTAG
TTGGTGCCCTACTTGTTTGTTTTGGTAGGAAAAATTTGATAATTTGCCTT
GGTGATACATTTTTCCTTTAAAGGTGCCAGACTCTCAAGTGCAAAGTGTT
ATGTATTTGCGAATGGTGACAAGCTTCTTCAGTATTTTTCTGGTGCCATT
GATTTACGAGGATACTTAACTGGTTTTGACGGATCTTTTAACTTTCCAAA
GATTGGTGAAGATTTGACGAGCTACATTATGGAAAGTTCACATCATATTT
TGTGCAAGAGCGGTTTTTCTTTGATGTGCATCCTCCACTTGGAAAATTGC
TCTTTGCAGCTGCAGTACAAAAATCAGATGTCAAAAGACCAGCCAATCCA
CCTGTCAACAAGGAACTTCAAAACGCCATCCATCTCTCCTGAAGTTGATC
TCACATGGTTTCTTCTACTTGGTGTGGCATCTGCTGTGCGTTTATACAAG
TTATCAAAGCCAAATGCTGTTGTATGGAATTTGAAGAAGTCTCTAAGAAG
AGCACGAAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036568XLOC_036568Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058012-proteinTCONS_00058012-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058012-exon-scaffold_303-1575043694:33591..33775TCONS_00058012-exon-scaffold_303-1575043694:33591..33775Clytia hemisphaericaexon
TCONS_00058012-exon-scaffold_303-1575043694:24765..24922TCONS_00058012-exon-scaffold_303-1575043694:24765..24922Clytia hemisphaericaexon
TCONS_00058012-exon-scaffold_303-1575043694:24508..24611TCONS_00058012-exon-scaffold_303-1575043694:24508..24611Clytia hemisphaericaexon
TCONS_00058012-exon-scaffold_303-1575043694:23893..23943TCONS_00058012-exon-scaffold_303-1575043694:23893..23943Clytia hemisphaericaexon
TCONS_00058012-exon-scaffold_303-1575043694:23625..23713TCONS_00058012-exon-scaffold_303-1575043694:23625..23713Clytia hemisphaericaexon
TCONS_00058012-exon-scaffold_303-1575043694:23114..23353TCONS_00058012-exon-scaffold_303-1575043694:23114..23353Clytia hemisphaericaexon
TCONS_00058012-exon-scaffold_303-1510915933:33591..33775TCONS_00058012-exon-scaffold_303-1510915933:33591..33775Clytia hemisphaericaexon
TCONS_00058012-exon-scaffold_303-1510915933:24765..24922TCONS_00058012-exon-scaffold_303-1510915933:24765..24922Clytia hemisphaericaexon
TCONS_00058012-exon-scaffold_303-1510915933:24508..24611TCONS_00058012-exon-scaffold_303-1510915933:24508..24611Clytia hemisphaericaexon
TCONS_00058012-exon-scaffold_303-1510915933:23893..23943TCONS_00058012-exon-scaffold_303-1510915933:23893..23943Clytia hemisphaericaexon
TCONS_00058012-exon-scaffold_303-1510915933:23625..23713TCONS_00058012-exon-scaffold_303-1510915933:23625..23713Clytia hemisphaericaexon
TCONS_00058012-exon-scaffold_303-1510915933:23114..23353TCONS_00058012-exon-scaffold_303-1510915933:23114..23353Clytia hemisphaericaexon
TCONS_00058012-exon-scaffold_303-1491911889:33591..33775TCONS_00058012-exon-scaffold_303-1491911889:33591..33775Clytia hemisphaericaexon
TCONS_00058012-exon-scaffold_303-1491911889:24765..24922TCONS_00058012-exon-scaffold_303-1491911889:24765..24922Clytia hemisphaericaexon
TCONS_00058012-exon-scaffold_303-1491911889:24508..24611TCONS_00058012-exon-scaffold_303-1491911889:24508..24611Clytia hemisphaericaexon
TCONS_00058012-exon-scaffold_303-1491911889:23893..23943TCONS_00058012-exon-scaffold_303-1491911889:23893..23943Clytia hemisphaericaexon
TCONS_00058012-exon-scaffold_303-1491911889:23625..23713TCONS_00058012-exon-scaffold_303-1491911889:23625..23713Clytia hemisphaericaexon
TCONS_00058012-exon-scaffold_303-1491911889:23114..23353TCONS_00058012-exon-scaffold_303-1491911889:23114..23353Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_303supercontigscaffold_303:23114..33775 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (4.45246 tpm) - - (56.1063 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.1704 14.3312 5.13496 4.76939 51.1727 45.0255 50.8525 56.1063 26.0263 38.0502 21.7523 22.0604 13.4011 9.59533 15.158 14.7626 17.4968 19.1263 8.90969 9.51493 11.3785 13.32 14.6783 16.5164 10.8479 11.0567 6.61222 4.45246 15.6745 14.9312
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003342Glyco_trans_39/83
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0000030mannosyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006493protein O-linked glycosylation
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006493 protein O-linked glycosylation
cellular_component GO:0016020 membrane
molecular_function GO:0000030 mannosyltransferase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058012 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
100200300400500600700800Expect = 2.36e-23 / Id = 34.18SequencePOMT2
Match NameE-valueIdentityDescription
POMT22.358e-2334.18Protein O-mannosyl-transferase 2 OS=Homo sapiens G... [more]
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