TCONS_00058081 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00058081
Unique Name	TCONS_00058081
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1561

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_305:13380..17281-
coding sequence from alignment at scaffold_305:13380..17281-

transcript sequence

>TCONS_00058081 ID=TCONS_00058081|Name=TCONS_00058081|organism=Clytia hemisphaerica|type=transcript|length=1561bp
TTTTGGTCACTTTTCAGTTTACGTTTTGCGGTCGGTTGCTTGGTTGAACT
TGGTTGATCTCTTTTTAGTTccatttaaaattttatcaccTTGCCATCAC
CTAATTTGCATATAAGTCTCCTTTCTTGAATTAGCAATTGTTTTTGGATT
ATAAAATGTATGGACTTGGTAAAGAAAAGCCGTTCGTACCGATATTTGGT
TGTCGAAAAAGACAGCAGCGCCACGCAGCCTACGCGAATCCAGATGAACT
GTCTACTCTTCCATCTTCAAATTCAAACATACCAAGCAATCATAACGTCT
CTCAAATATCGATGGGCTCTGactttgattgttttgatatcCCGATGATG
GCTGATGAGAAGCCACCTGTcacaaagaagaaaatcatGCATGAGCAAAA
ACCACCACGATATAAACAAAATCAAGAACAACAAAGAAACACTTTCCaac
aacagaaaaaaacaaaactaatGAAATCATTTTCCGAAAAACATGGGTCG
TCTAATAACAGCAAAACAATGGAGAAAACTGATTACATTCCGTCTTTTCA
AAAACAACAACCCTCCTATCAAAACCATTCTACCAGGAAATTTCCCGATC
ATGACGAAccaaaacattatttttctcGACAACAACAAGGACAGAATCTT
TCAACAACGATGCAAGACCAAGGACCTTCTAGAAAGCCTTttgatgaaaa
aactttttcatgcCAACCGGGAAACACGCAAAGGTCCGGAGATTTCGGGA
ATAATGAATTCAATCAAGGCTCAAAAGCCTCGTCTTTGAAATACGTTGAA
ACGAAAAAGGACGACTCAATGATGGATATTTCAACAATAAACCGATCTAT
CATAGTAAGGAATAAGACACAATCACTTGCTCCACGTTTTATAAGCTCTC
GTGTTGGTGACATAAAGAAATGGTTAGATTTGCCAATCAATGAAGAAACT
TCACAAATTGTCTTCGAGCTCGTCGGTATCTTAGATTCAACCATCTCGTA
TCATTTACCTGGAGTTGAAAAGAAATTCACATTAAAAGATTCCTCAGGAA
CCATTAGgtgCGTGTTTTGGGAGATGGACCGTAAAATTCCACAACTTCGA
CGTGGTAGTTTGATTCGATGTGTTGGCAGAATGAGAGATAGCTCCATCTT
TCACTGCGTCTCTGTTAGATCGATCGCACCAAGTGAGCAATCAATACTTC
AAAAGTTTCAACAGAATTGTCAACAGTACCTTCAACATAAAATGACTACG
TTTAATGAAGTCTGACTACTACAACCGTTTTGCTTCTTTCATGCTCGGAT
GAACTATATTAGAGCTGTTGAATTAGGCTGAATCGAACGCACTTAATAAT
AGCCTTTTTTAGCAGGCGTTAGAAAGGAAAAGTGTCGGTTTATTTTCCAC
AAATATGCACGATCGATTTAATTATTTTAGGACTTCCAAAAGGAAATGTT
GCGTTTTAAGTTTTTAGCCTTGTAATTATATATTTTGTACCTTGAAATTt
gcatttttaaacaattttatgTGACTAtgttttgtgtttatcttgaattg
gaagaaagtca

Run BLAST on NCBI

protein sequence of TCONS_00058081-protein

>TCONS_00058081-protein ID=TCONS_00058081-protein|Name=TCONS_00058081-protein|organism=Clytia hemisphaerica|type=polypeptide|length=369bp
MYGLGKEKPFVPIFGCRKRQQRHAAYANPDELSTLPSSNSNIPSNHNVSQ
ISMGSDFDCFDIPMMADEKPPVTKKKIMHEQKPPRYKQNQEQQRNTFQQQ
KKTKLMKSFSEKHGSSNNSKTMEKTDYIPSFQKQQPSYQNHSTRKFPDHD
EPKHYFSRQQQGQNLSTTMQDQGPSRKPFDEKTFSCQPGNTQRSGDFGNN
EFNQGSKASSLKYVETKKDDSMMDISTINRSIIVRNKTQSLAPRFISSRV
GDIKKWLDLPINEETSQIVFELVGILDSTISYHLPGVEKKFTLKDSSGTI
RCVFWEMDRKIPQLRRGSLIRCVGRMRDSSIFHCVSVRSIAPSEQSILQK
FQQNCQQYLQHKMTTFNEV

Run BLAST on NCBI

transcript from alignment at scaffold_305:13380..17281-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00058081 ID=TCONS_00058081|Name=TCONS_00058081|organism=Clytia hemisphaerica|type=transcript|length=3902bp|location=Sequence derived from alignment at scaffold_305:13380..17281- (Clytia hemisphaerica)
TTTTGGTCACTTTTCAGTTTACGTTTTGCGGTCGGTTGCTTGGTTGAACT
TGGTTGATCTCTTTTTAGTTCCATTTAAAATTTTATCACCTTGCCATCAC
CTAATTTGCATATAAGTCTCCTTTCTTGAATTAGCAATTGTTTTTGGATT
ATAAAATGTATGGACTTGGTAAAGGTAAGGAGACATACTTTCATCCTACC
GTTTTATTATTTTATTACCGTTTTTTATTTACCTAACTTCACTTCACCCC
TACCTTCCTTCTAAAAAGTTATAAAAAGGACGATTTGATTTTTAGAGCAG
AGTTTCTCTTCTCGTTTATTCCTTATTCTTCATTCCCCACAAGTCTCGTC
ATATTTCTATTCGCTCCTCTAAAAATAGACCTTTTTTCAAAGAGGCCACC
CTGTTGAATAATTAAATTATGTAGTCCAGCAGAAAAACAATGATGAGACC
ATGCATAATTATTACAATATGCATGATACAGTAATTATGCATGGCTCTAT
CATTGTTTTTATGGCTGGACTACATAATTATTCAACAGGACGTCCTCTTT
GAAAAAAGGTCTATTGCTAAGTCACTCCATGCAGATGCATCCAGCATCAG
CATAAAACAAAAATTCCATAAAAAAGAAAAAAAGGCATAACACACGTTTT
TTATAAGAACATTCAAAATTTTTAATGTCTTCGACTGTTCTTAACTTTTT
GAGTTTTAAACCTAATAATATTAACATGTTTTTTTTTCCCCTAAGAAATA
AATAGGGTGTTTTTTTTTATTGGTGAGCCCACAAAGTCTTAAAATGTTCT
TGACTTGTTCTTAACATCATAGCCATCGAAGCCATATGTTCTTTAGTTTG
TTCTTATAAAAAAACGTGTAGGTTTTGAAATTAATAACGGTCGTCTGGCG
GACCTAAAATGTTTACTGCCTGTTGTCCCAAAAATTAAAAATCAGTACAG
TATCCAATCAAAATTAACCCTGATCGGACACATTTTGTCCGACCAACCCG
ATGTCCTCGATTGAAATCGTAAAATATTAAAGACATTTTTCGTTCGAATT
TCTTTCCATAGAAAAGCCGTTCGTACCGATATTTGGTTGTCGAAAAAGAC
AGCAGCGCCACGCAGCCTACGCGAATCCAGATGAACTGTCTACTCTTCCA
TCTTCAAATTCAAACATACCAAGCAATCATAACGTCTCTCAAATATCGAT
GGGCTCTGACTTTGATTGTTTTGATATCCCGATGATGGCTGATGAGAAGC
CACCTGTCACAAAGAAGAAAATCATGCATGAGCAAAAACCACCACGATAT
AAACAAAATCAAGAACAACAAAGAAACACTTTCCAACAACAGAAAAAAAC
AAAACTAATGAAATCATTTTCCGAAAAACATGGGTCGTCTAATAACAGCA
AAACAATGGAGAAAACTGATTACATTCCGTCTTTTCAAAAACAACAACCC
TCCTATCAAAACCATTCTACCAGGAAATTTCCCGATCATGACGAACCAAA
ACATTATTTTTCTCGACAACAACAAGGACAGAATCTTTCAACAACGATGC
AAGACCAAGGACCTTCTAGAAAGCCTTTTGATGAAAAAACTTTTTCATGC
CAACCGGGAAACACGCAAAGGTGATTCTTCATTTAAACCAGGAAAAATCA
ATTAAAGTCACATTGATATAGGTTTTTCATTCATTGTAAAAAGCCGAAAT
ATTTTTGAAAGGTTTCTGATTTGAAAAGTCAAATAAGATAAAACTTGACA
ACATTTTCAGTCGGACTGGTCGCACCTTTTTTGAACGATTAATTTATTTA
ATTTTTTTTTACTTTGCTGCACCTTTTCTCATAGGTCCGGAGATTTCGGG
AATAATGAATTCAATCAAGGCTCAAAAGCCTCGTCTTTGAAATACGTTGA
AACGAAAAAGGTATAAAAAACTGATAATTCTTTGTAACTCAGCGGTTTCA
TTTTTGCAATATTCAATTTCGCGGAGGAGCTGAAATCTACTGAAGATAGA
TAGCCTTGAAAACTCTTCGTCTAAAATAGAAATTACGAATTTTCAATCAC
AAATTTGATTTGATTTTGAAAATTTCGCATGAATTTAACTCGCGAGAGTC
AGCAGAGCACACTGTTTTTGCAAGATCTATTTTCGCGAAAAAGGTAGAAA
TTTACAGCAATGCGAAGTTTAATCTCATGAAAATAATCCGATTAAAGTGA
GGTGTAAGGCTGGCAGTATCTTGATAAAGTAACGAAATAATCAATAATGA
TAGTTTCCTCTGCAGGACGACTCAATGATGGATATTTCAACAATAAACCG
ATCTATCATAGTAAGGAATAAGACACAATCACTTGCTCCACGTTTTATAA
GCTCTCGTGTTGGTGACATAAAGAAATGGTTAGATTTGCCAATCAATGAA
GAAACTTCACAAATTGTCTTCGAGCTCGTCGGTAAAGTTATTGATAATGT
TGAATTTTATACACTTTTTCGATCGTAGCCGCCAATTGCCGCGCGGGCGA
TTTTTTGTCCGTTTTACCACCCTAAAACCGCCCCAGTCTTTTTTTGCACC
TATAAAAGCAATAGAAAAAAGTGTAAAAAAGGATTGGATCAAGTTTAGGG
TGATAAATTAAATAATAAAGTGGCACGCGCCTGACCGCGATCGAAAAGGT
GTATTCTCTTAGAATTTTGTTGGTCAGTTTGATTGATTTGTTTTTGTATT
TCTAGTTGTGTATGTAGGGATATTTTGACTAAAACTTTCATGACTGAATA
TCTAAGACCCTTCTTTATTACCTTAGGTATCTTAGATTCAACCATCTCGT
ATCATTTACCTGGAGTTGAAAAGAAATTCACATTAAAAGATTCCTCAGGA
ACCATTAGGTAGGTAAGGTTTTTTATCCGAAACTTGCTTGATTACACCCG
TGTCTCAGTGAGTGATTGTTTTTCAGACAGGTAAAATTCAGTAGAATGGC
CATATTTTTAAACCAATCTTAATATTACTCTTGGGTATACTTATTTTTCT
CCACAATTTCATTATTATTCAGAGCAATGAACGGAAGACGAAAAATGATT
TTAACATAACTGAGTGTAAATTTTCACCTTATTTTATTTTCAGGTGCGTG
TTTTGGGAGATGGTAAGCATTTACATTCATTCACCATCGTTATGGTCATC
ATAAGAAATCTTCAAGAGCAACATGAACTCCATAAAAAGCTTTTTAGCTT
CAAATCAGGAGTAATAAGATATTATTTTCTCATATAGGACCGTAAAATTC
CACAACTTCGACGTGGTAGTTTGATTCGGTAAGTTTGGTAATATATCATC
TTTTTAGTCGAAAACGAACTGCTACATCCCTGTCTCAGTGACTTGGAGAT
CAGTGAGATAAAACGAACTCTAATAGTGGAAGTAAGCTAAGGATTAGTAC
AGTAAACATTTGTTAAAGAACAGGTTTACTTAAGAAATCAAATGTTCTTC
TATTCTAGATGTGTTGGCAGAATGAGAGATAGCTCCATCTTTCACTGCGT
CTCTGTTAGATCGATCGCACCAAGTGAGCAATCAATACTTCAAAAGTTTC
AACAGAATTGTCAACAGTACCTTCAACATAAAATGACTACGTTTAATGAA
GTCTGACTACTACAACCGTTTTGCTTCTTTCATGCTCGGATGAACTATAT
TAGAGCTGTTGAATTAGGCTGAATCGAACGCACTTAATAATAGCCTTTTT
TAGCAGGCGTTAGAAAGGAAAAGTGTCGGTTTATTTTCCACAAATATGCA
CGATCGATTTAATTATTTTAGGACTTCCAAAAGGAAATGTTGCGTTTTAA
GTTTTTAGCCTTGTAATTATATATTTTGTACCTTGAAATTTGCATTTTTA
AACAATTTTATGTGACTATGTTTTGTGTTTATCTTGAATTGGAAGAAAGT
CA

Coding sequence (CDS) from alignment at scaffold_305:13380..17281-

>TCONS_00058081 ID=TCONS_00058081|Name=TCONS_00058081|organism=Clytia hemisphaerica|type=CDS|length=8880bp|location=Sequence derived from alignment at scaffold_305:13380..17281- (Clytia hemisphaerica)
ATGTGTTGGCAGAATGAGAGATAGCTCCATCTTTCACTGCGTCTCTGTTA
GATCGATCGCACCAAGTGAGCAATCAATACTTCAAAAGTTTCAACAGAAT
TGTCAACAGTACCTTCAACATAAAATGACTACGTTTAATGAAGTCTGAGA
CCGTAAAATTCCACAACTTCGACGTGGTAGTTTGATTCGGTGCGTGTTTT
GGGAGATGGTATCTTAGATTCAACCATCTCGTATCATTTACCTGGAGTTG
AAAAGAAATTCACATTAAAAGATTCCTCAGGAACCATTAGGACGACTCAA
TGATGGATATTTCAACAATAAACCGATCTATCATAGTAAGGAATAAGACA
CAATCACTTGCTCCACGTTTTATAAGCTCTCGTGTTGGTGACATAAAGAA
ATGGTTAGATTTGCCAATCAATGAAGAAACTTCACAAATTGTCTTCGAGC
TCGTCGGTCCGGAGATTTCGGGAATAATGAATTCAATCAAGGCTCAAAAG
CCTCGTCTTTGAAATACGTTGAAACGAAAAAGAAAAGCCGTTCGTACCGA
TATTTGGTTGTCGAAAAAGACAGCAGCGCCACGCAGCCTACGCGAATCCA
GATGAACTGTCTACTCTTCCATCTTCAAATTCAAACATACCAAGCAATCA
TAACGTCTCTCAAATATCGATGGGCTCTGACTTTGATTGTTTTGATATCC
CGATGATGGCTGATGAGAAGCCACCTGTCACAAAGAAGAAAATCATGCAT
GAGCAAAAACCACCACGATATAAACAAAATCAAGAACAACAAAGAAACAC
TTTCCAACAACAGAAAAAAACAAAACTAATGAAATCATTTTCCGAAAAAC
ATGGGTCGTCTAATAACAGCAAAACAATGGAGAAAACTGATTACATTCCG
TCTTTTCAAAAACAACAACCCTCCTATCAAAACCATTCTACCAGGAAATT
TCCCGATCATGACGAACCAAAACATTATTTTTCTCGACAACAACAAGGAC
AGAATCTTTCAACAACGATGCAAGACCAAGGACCTTCTAGAAAGCCTTTT
GATGAAAAAACTTTTTCATGCCAACCGGGAAACACGCAAAGATGTATGGA
CTTGGTAAAGATGTGTTGGCAGAATGAGAGATAGCTCCATCTTTCACTGC
GTCTCTGTTAGATCGATCGCACCAAGTGAGCAATCAATACTTCAAAAGTT
TCAACAGAATTGTCAACAGTACCTTCAACATAAAATGACTACGTTTAATG
AAGTCTGAGACCGTAAAATTCCACAACTTCGACGTGGTAGTTTGATTCGG
TGCGTGTTTTGGGAGATGGTATCTTAGATTCAACCATCTCGTATCATTTA
CCTGGAGTTGAAAAGAAATTCACATTAAAAGATTCCTCAGGAACCATTAG
GACGACTCAATGATGGATATTTCAACAATAAACCGATCTATCATAGTAAG
GAATAAGACACAATCACTTGCTCCACGTTTTATAAGCTCTCGTGTTGGTG
ACATAAAGAAATGGTTAGATTTGCCAATCAATGAAGAAACTTCACAAATT
GTCTTCGAGCTCGTCGGTCCGGAGATTTCGGGAATAATGAATTCAATCAA
GGCTCAAAAGCCTCGTCTTTGAAATACGTTGAAACGAAAAAGAAAAGCCG
TTCGTACCGATATTTGGTTGTCGAAAAAGACAGCAGCGCCACGCAGCCTA
CGCGAATCCAGATGAACTGTCTACTCTTCCATCTTCAAATTCAAACATAC
CAAGCAATCATAACGTCTCTCAAATATCGATGGGCTCTGACTTTGATTGT
TTTGATATCCCGATGATGGCTGATGAGAAGCCACCTGTCACAAAGAAGAA
AATCATGCATGAGCAAAAACCACCACGATATAAACAAAATCAAGAACAAC
AAAGAAACACTTTCCAACAACAGAAAAAAACAAAACTAATGAAATCATTT
TCCGAAAAACATGGGTCGTCTAATAACAGCAAAACAATGGAGAAAACTGA
TTACATTCCGTCTTTTCAAAAACAACAACCCTCCTATCAAAACCATTCTA
CCAGGAAATTTCCCGATCATGACGAACCAAAACATTATTTTTCTCGACAA
CAACAAGGACAGAATCTTTCAACAACGATGCAAGACCAAGGACCTTCTAG
AAAGCCTTTTGATGAAAAAACTTTTTCATGCCAACCGGGAAACACGCAAA
GATGTATGGACTTGGTAAAGATGTGTTGGCAGAATGAGAGATAGCTCCAT
CTTTCACTGCGTCTCTGTTAGATCGATCGCACCAAGTGAGCAATCAATAC
TTCAAAAGTTTCAACAGAATTGTCAACAGTACCTTCAACATAAAATGACT
ACGTTTAATGAAGTCTGAGACCGTAAAATTCCACAACTTCGACGTGGTAG
TTTGATTCGGTGCGTGTTTTGGGAGATGGTATCTTAGATTCAACCATCTC
GTATCATTTACCTGGAGTTGAAAAGAAATTCACATTAAAAGATTCCTCAG
GAACCATTAGGACGACTCAATGATGGATATTTCAACAATAAACCGATCTA
TCATAGTAAGGAATAAGACACAATCACTTGCTCCACGTTTTATAAGCTCT
CGTGTTGGTGACATAAAGAAATGGTTAGATTTGCCAATCAATGAAGAAAC
TTCACAAATTGTCTTCGAGCTCGTCGGTCCGGAGATTTCGGGAATAATGA
ATTCAATCAAGGCTCAAAAGCCTCGTCTTTGAAATACGTTGAAACGAAAA
AGAAAAGCCGTTCGTACCGATATTTGGTTGTCGAAAAAGACAGCAGCGCC
ACGCAGCCTACGCGAATCCAGATGAACTGTCTACTCTTCCATCTTCAAAT
TCAAACATACCAAGCAATCATAACGTCTCTCAAATATCGATGGGCTCTGA
CTTTGATTGTTTTGATATCCCGATGATGGCTGATGAGAAGCCACCTGTCA
CAAAGAAGAAAATCATGCATGAGCAAAAACCACCACGATATAAACAAAAT
CAAGAACAACAAAGAAACACTTTCCAACAACAGAAAAAAACAAAACTAAT
GAAATCATTTTCCGAAAAACATGGGTCGTCTAATAACAGCAAAACAATGG
AGAAAACTGATTACATTCCGTCTTTTCAAAAACAACAACCCTCCTATCAA
AACCATTCTACCAGGAAATTTCCCGATCATGACGAACCAAAACATTATTT
TTCTCGACAACAACAAGGACAGAATCTTTCAACAACGATGCAAGACCAAG
GACCTTCTAGAAAGCCTTTTGATGAAAAAACTTTTTCATGCCAACCGGGA
AACACGCAAAGATGTATGGACTTGGTAAAGATGTGTTGGCAGAATGAGAG
ATAGCTCCATCTTTCACTGCGTCTCTGTTAGATCGATCGCACCAAGTGAG
CAATCAATACTTCAAAAGTTTCAACAGAATTGTCAACAGTACCTTCAACA
TAAAATGACTACGTTTAATGAAGTCTGAGACCGTAAAATTCCACAACTTC
GACGTGGTAGTTTGATTCGGTGCGTGTTTTGGGAGATGGTATCTTAGATT
CAACCATCTCGTATCATTTACCTGGAGTTGAAAAGAAATTCACATTAAAA
GATTCCTCAGGAACCATTAGGACGACTCAATGATGGATATTTCAACAATA
AACCGATCTATCATAGTAAGGAATAAGACACAATCACTTGCTCCACGTTT
TATAAGCTCTCGTGTTGGTGACATAAAGAAATGGTTAGATTTGCCAATCA
ATGAAGAAACTTCACAAATTGTCTTCGAGCTCGTCGGTCCGGAGATTTCG
GGAATAATGAATTCAATCAAGGCTCAAAAGCCTCGTCTTTGAAATACGTT
GAAACGAAAAAGAAAAGCCGTTCGTACCGATATTTGGTTGTCGAAAAAGA
CAGCAGCGCCACGCAGCCTACGCGAATCCAGATGAACTGTCTACTCTTCC
ATCTTCAAATTCAAACATACCAAGCAATCATAACGTCTCTCAAATATCGA
TGGGCTCTGACTTTGATTGTTTTGATATCCCGATGATGGCTGATGAGAAG
CCACCTGTCACAAAGAAGAAAATCATGCATGAGCAAAAACCACCACGATA
TAAACAAAATCAAGAACAACAAAGAAACACTTTCCAACAACAGAAAAAAA
CAAAACTAATGAAATCATTTTCCGAAAAACATGGGTCGTCTAATAACAGC
AAAACAATGGAGAAAACTGATTACATTCCGTCTTTTCAAAAACAACAACC
CTCCTATCAAAACCATTCTACCAGGAAATTTCCCGATCATGACGAACCAA
AACATTATTTTTCTCGACAACAACAAGGACAGAATCTTTCAACAACGATG
CAAGACCAAGGACCTTCTAGAAAGCCTTTTGATGAAAAAACTTTTTCATG
CCAACCGGGAAACACGCAAAGATGTATGGACTTGGTAAAGATGTGTTGGC
AGAATGAGAGATAGCTCCATCTTTCACTGCGTCTCTGTTAGATCGATCGC
ACCAAGTGAGCAATCAATACTTCAAAAGTTTCAACAGAATTGTCAACAGT
ACCTTCAACATAAAATGACTACGTTTAATGAAGTCTGAGACCGTAAAATT
CCACAACTTCGACGTGGTAGTTTGATTCGGTGCGTGTTTTGGGAGATGGT
ATCTTAGATTCAACCATCTCGTATCATTTACCTGGAGTTGAAAAGAAATT
CACATTAAAAGATTCCTCAGGAACCATTAGGACGACTCAATGATGGATAT
TTCAACAATAAACCGATCTATCATAGTAAGGAATAAGACACAATCACTTG
CTCCACGTTTTATAAGCTCTCGTGTTGGTGACATAAAGAAATGGTTAGAT
TTGCCAATCAATGAAGAAACTTCACAAATTGTCTTCGAGCTCGTCGGTCC
GGAGATTTCGGGAATAATGAATTCAATCAAGGCTCAAAAGCCTCGTCTTT
GAAATACGTTGAAACGAAAAAGAAAAGCCGTTCGTACCGATATTTGGTTG
TCGAAAAAGACAGCAGCGCCACGCAGCCTACGCGAATCCAGATGAACTGT
CTACTCTTCCATCTTCAAATTCAAACATACCAAGCAATCATAACGTCTCT
CAAATATCGATGGGCTCTGACTTTGATTGTTTTGATATCCCGATGATGGC
TGATGAGAAGCCACCTGTCACAAAGAAGAAAATCATGCATGAGCAAAAAC
CACCACGATATAAACAAAATCAAGAACAACAAAGAAACACTTTCCAACAA
CAGAAAAAAACAAAACTAATGAAATCATTTTCCGAAAAACATGGGTCGTC
TAATAACAGCAAAACAATGGAGAAAACTGATTACATTCCGTCTTTTCAAA
AACAACAACCCTCCTATCAAAACCATTCTACCAGGAAATTTCCCGATCAT
GACGAACCAAAACATTATTTTTCTCGACAACAACAAGGACAGAATCTTTC
AACAACGATGCAAGACCAAGGACCTTCTAGAAAGCCTTTTGATGAAAAAA
CTTTTTCATGCCAACCGGGAAACACGCAAAGATGTATGGACTTGGTAAAG
ATGTGTTGGCAGAATGAGAGATAGCTCCATCTTTCACTGCGTCTCTGTTA
GATCGATCGCACCAAGTGAGCAATCAATACTTCAAAAGTTTCAACAGAAT
TGTCAACAGTACCTTCAACATAAAATGACTACGTTTAATGAAGTCTGAGA
CCGTAAAATTCCACAACTTCGACGTGGTAGTTTGATTCGGTGCGTGTTTT
GGGAGATGGTATCTTAGATTCAACCATCTCGTATCATTTACCTGGAGTTG
AAAAGAAATTCACATTAAAAGATTCCTCAGGAACCATTAGGACGACTCAA
TGATGGATATTTCAACAATAAACCGATCTATCATAGTAAGGAATAAGACA
CAATCACTTGCTCCACGTTTTATAAGCTCTCGTGTTGGTGACATAAAGAA
ATGGTTAGATTTGCCAATCAATGAAGAAACTTCACAAATTGTCTTCGAGC
TCGTCGGTCCGGAGATTTCGGGAATAATGAATTCAATCAAGGCTCAAAAG
CCTCGTCTTTGAAATACGTTGAAACGAAAAAGAAAAGCCGTTCGTACCGA
TATTTGGTTGTCGAAAAAGACAGCAGCGCCACGCAGCCTACGCGAATCCA
GATGAACTGTCTACTCTTCCATCTTCAAATTCAAACATACCAAGCAATCA
TAACGTCTCTCAAATATCGATGGGCTCTGACTTTGATTGTTTTGATATCC
CGATGATGGCTGATGAGAAGCCACCTGTCACAAAGAAGAAAATCATGCAT
GAGCAAAAACCACCACGATATAAACAAAATCAAGAACAACAAAGAAACAC
TTTCCAACAACAGAAAAAAACAAAACTAATGAAATCATTTTCCGAAAAAC
ATGGGTCGTCTAATAACAGCAAAACAATGGAGAAAACTGATTACATTCCG
TCTTTTCAAAAACAACAACCCTCCTATCAAAACCATTCTACCAGGAAATT
TCCCGATCATGACGAACCAAAACATTATTTTTCTCGACAACAACAAGGAC
AGAATCTTTCAACAACGATGCAAGACCAAGGACCTTCTAGAAAGCCTTTT
GATGAAAAAACTTTTTCATGCCAACCGGGAAACACGCAAAGATGTATGGA
CTTGGTAAAGATGTGTTGGCAGAATGAGAGATAGCTCCATCTTTCACTGC
GTCTCTGTTAGATCGATCGCACCAAGTGAGCAATCAATACTTCAAAAGTT
TCAACAGAATTGTCAACAGTACCTTCAACATAAAATGACTACGTTTAATG
AAGTCTGAGACCGTAAAATTCCACAACTTCGACGTGGTAGTTTGATTCGG
TGCGTGTTTTGGGAGATGGTATCTTAGATTCAACCATCTCGTATCATTTA
CCTGGAGTTGAAAAGAAATTCACATTAAAAGATTCCTCAGGAACCATTAG
GACGACTCAATGATGGATATTTCAACAATAAACCGATCTATCATAGTAAG
GAATAAGACACAATCACTTGCTCCACGTTTTATAAGCTCTCGTGTTGGTG
ACATAAAGAAATGGTTAGATTTGCCAATCAATGAAGAAACTTCACAAATT
GTCTTCGAGCTCGTCGGTCCGGAGATTTCGGGAATAATGAATTCAATCAA
GGCTCAAAAGCCTCGTCTTTGAAATACGTTGAAACGAAAAAGAAAAGCCG
TTCGTACCGATATTTGGTTGTCGAAAAAGACAGCAGCGCCACGCAGCCTA
CGCGAATCCAGATGAACTGTCTACTCTTCCATCTTCAAATTCAAACATAC
CAAGCAATCATAACGTCTCTCAAATATCGATGGGCTCTGACTTTGATTGT
TTTGATATCCCGATGATGGCTGATGAGAAGCCACCTGTCACAAAGAAGAA
AATCATGCATGAGCAAAAACCACCACGATATAAACAAAATCAAGAACAAC
AAAGAAACACTTTCCAACAACAGAAAAAAACAAAACTAATGAAATCATTT
TCCGAAAAACATGGGTCGTCTAATAACAGCAAAACAATGGAGAAAACTGA
TTACATTCCGTCTTTTCAAAAACAACAACCCTCCTATCAAAACCATTCTA
CCAGGAAATTTCCCGATCATGACGAACCAAAACATTATTTTTCTCGACAA
CAACAAGGACAGAATCTTTCAACAACGATGCAAGACCAAGGACCTTCTAG
AAAGCCTTTTGATGAAAAAACTTTTTCATGCCAACCGGGAAACACGCAAA
GATGTATGGACTTGGTAAAGATGTGTTGGCAGAATGAGAGATAGCTCCAT
CTTTCACTGCGTCTCTGTTAGATCGATCGCACCAAGTGAGCAATCAATAC
TTCAAAAGTTTCAACAGAATTGTCAACAGTACCTTCAACATAAAATGACT
ACGTTTAATGAAGTCTGAGACCGTAAAATTCCACAACTTCGACGTGGTAG
TTTGATTCGGTGCGTGTTTTGGGAGATGGTATCTTAGATTCAACCATCTC
GTATCATTTACCTGGAGTTGAAAAGAAATTCACATTAAAAGATTCCTCAG
GAACCATTAGGACGACTCAATGATGGATATTTCAACAATAAACCGATCTA
TCATAGTAAGGAATAAGACACAATCACTTGCTCCACGTTTTATAAGCTCT
CGTGTTGGTGACATAAAGAAATGGTTAGATTTGCCAATCAATGAAGAAAC
TTCACAAATTGTCTTCGAGCTCGTCGGTCCGGAGATTTCGGGAATAATGA
ATTCAATCAAGGCTCAAAAGCCTCGTCTTTGAAATACGTTGAAACGAAAA
AGAAAAGCCGTTCGTACCGATATTTGGTTGTCGAAAAAGACAGCAGCGCC
ACGCAGCCTACGCGAATCCAGATGAACTGTCTACTCTTCCATCTTCAAAT
TCAAACATACCAAGCAATCATAACGTCTCTCAAATATCGATGGGCTCTGA
CTTTGATTGTTTTGATATCCCGATGATGGCTGATGAGAAGCCACCTGTCA
CAAAGAAGAAAATCATGCATGAGCAAAAACCACCACGATATAAACAAAAT
CAAGAACAACAAAGAAACACTTTCCAACAACAGAAAAAAACAAAACTAAT
GAAATCATTTTCCGAAAAACATGGGTCGTCTAATAACAGCAAAACAATGG
AGAAAACTGATTACATTCCGTCTTTTCAAAAACAACAACCCTCCTATCAA
AACCATTCTACCAGGAAATTTCCCGATCATGACGAACCAAAACATTATTT
TTCTCGACAACAACAAGGACAGAATCTTTCAACAACGATGCAAGACCAAG
GACCTTCTAGAAAGCCTTTTGATGAAAAAACTTTTTCATGCCAACCGGGA
AACACGCAAAGATGTATGGACTTGGTAAAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_036601	XLOC_036601	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00058081-protein	TCONS_00058081-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_305	supercontig	scaffold_305:13380..17281 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.0559271	0	0	0	0	0	0	0	0	0.0298009	0	0.157592	0.201908	0	0	0.101485	0.148502	0.150437	0	21.6371	19.7352	0	0	0	0

Blast

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BLAST of TCONS_00058081 vs. Swiss-Prot (Human)
Match: SPT22 (Spermatogenesis-associated protein 22 OS=Homo sapiens GN=SPATA22 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 5.510e-18
Identity = 44/127 (34.65%), Postives = 74/127 (58.27%), Query Frame = 3

Query:  885 RFISSRVGDIKKWLDLPINEETSQIVFELVGILDSTISYHLPGVEKKFTLKDSSGTIRCVFWEMDRKIPQLRRGSLIRCVGRM-RDSSIFHCVSVRSIAPSEQSILQKFQQNCQQYLQHKMTTFNEV 1262
            R IS+ +  +K W +   + + + ++FE++ +LDS ++   P   K F ++D   T+ CVF+E+DR++P+L RG + RCVG   +  +IF CVSVR  + SEQ   Q F +     +Q+ +   NE 
Sbjct:  241 RIISAVIESMKYWRE---HAQKTVLLFEVLAVLDSAVTPG-PYYSKTFLMRDGKNTLPCVFYEIDRELPRLIRGRVHRCVGNYDQKKNIFQCVSVRPASVSEQKTFQAFVKIADVEMQYYINVMNET 363

The following BLAST results are available for this feature:

BLAST of TCONS_00058081 vs. Swiss-Prot (Human)

BLAST of TCONS_00058081 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SPT22	5.510e-18	34.65	Spermatogenesis-associated protein 22 OS=Homo sapi...	[more]

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TCONS_00058081 (transcript) - C. hemisphaerica