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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058155 ID=TCONS_00058155|Name=TCONS_00058155|organism=Clytia hemisphaerica|type=transcript|length=1270bp
GATTTCTTTATCGTTTTGGTTGTTCTTTCTGGTTGGTATCTAAAATAATG
GAATTAATACCGTAtttatttgtttgcttgtttgttAACTCAATCTATTT
TCTTTTCCATCTTTGTACAATCGACAGACGTGCTTCTCCGGGTTTCTACA
AATGCTTCAGAGCGATCTTTATCCCTTAACAAAGCTTCAAGGTACATTGA
ATCGGAAGTTTTGAGatttgatgGTAAGTGACATTGTATTTGTGGTGATC
TTTCTCTTCGTCCCATCTTTACCACAAGCGTACTACCTTGTCTCATTTTC
GTGGTTTGCACTGTTACTTATAAATTGGAGTTTCATAAATTGTTGGAATC
GTTGGGAAGGAATAAGAATCATAAAAGAATGGGGCACAGATGACAACGGT
AATCCAAAATGTACCAAGCGGTATAGACACTCGATGAAAGAAATCAAGGA
AATTCTGGATGAAAATTTACCAAAGGAGCCGAAAGTGATTGTTCAATGCG
AAGCTGTGGAACCTCGAACTTCGTGCTGCAGAAAACAACGCGTTAGTTGG
AGCAATCAGAAAGAGTTTGAATTTCAACATTGGATCGATGTGACTGAACA
ACATTTGGTGAAATCACAAATTGAAGAAGCGATTTTTGgtgaattgaaaa
ttgatttcgaATTTGATGACGAAGAAACGAAGGAATCATATGAACAACAC
GTTCAGAATCTTGTAAAAGAAGCAAAGCAACATTCTCCACACGCTCAAGT
CAACGTCAAGCAACTTTTCCAAGTCGGTGAAAAAGATATCAAAACCTACA
GACGGTCGTTTTATGGCAAGAAGGCTCTTTTTGGAAGACCATGGGTGTGT
CTTCAATGCGTTTTTCCTCAGATCGAACTTTcgttcaaaatattgaaatg
gtttctcgaaaaaattggcttcaaaagtttattgaccaaagaaattgtaa
tcaGAAAAGTAATATCTGACAGAAATATTGTATCTGTATAGCATTTGTGA
TCAATAATTTTATACCATTTTGAATAGTATAACATGGCGAAGACCTGTTC
CACGGGACGTTACGGTCTTTGTGTCTTAAACATTAAGCTATTCAACTTAC
AGTAAACCAATCAATCTGCTATACAGACCTGTTaggaaaaatttatttac
acTATAGCTCTTAAAACATCCATCCACGAAagttagaatttagaaaatat
acAAACTCTTTCAAAATCAGCCTCTTGAAAACACTTTTCATAAAAGCCAG
TAAGTTCGGTTGAAGCTGCG Run BLAST on NCBI protein sequence of TCONS_00058155-protein >TCONS_00058155-protein ID=TCONS_00058155-protein|Name=TCONS_00058155-protein|organism=Clytia hemisphaerica|type=polypeptide|length=256bp
MVSDIVFVVIFLFVPSLPQAYYLVSFSWFALLLINWSFINCWNRWEGIRI
IKEWGTDDNGNPKCTKRYRHSMKEIKEILDENLPKEPKVIVQCEAVEPRT
SCCRKQRVSWSNQKEFEFQHWIDVTEQHLVKSQIEEAIFGELKIDFEFDD
EETKESYEQHVQNLVKEAKQHSPHAQVNVKQLFQVGEKDIKTYRRSFYGK
KALFGRPWVCLQCVFPQIELSFKILKWFLEKIGFKSLLTKEIVIRKVISD
RNIVSV Run BLAST on NCBI transcript from alignment at scaffold_307:84736..86683- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058155 ID=TCONS_00058155|Name=TCONS_00058155|organism=Clytia hemisphaerica|type=transcript|length=1948bp|location=Sequence derived from alignment at scaffold_307:84736..86683- (Clytia hemisphaerica)
GATTTCTTTATCGTTTTGGTTGTTCTTTCTGGTTGGTATCTAAAATAATG
GAATTAATACCGTATTTATTTGTTTGCTTGTTTGTTAACTCAATCTATTT
TCTTTTCCATCTTTGTACAATCGACAGACGTGCTTCTCCGGGTTTCTACA
AATGCTTCAGAGCGATCTTTATCCCTTGTAAGTTTTAAGAATCCTTTTAA
GAAAGAAATACTTTACACATGAACTTTAGCATATCCTTCTCAAATCGAAT
CGCTCTTAATATAGTAGCCAAAAGTTAAGTTAATTTTAGTTAAAATACAC
GTGTTCAGATGCTCTTAACTTTTAGAGTTTTAAGCCTAAAAATGTTCTTA
ACATGTTCTTATATTTCAGCCATTGAAATCTCATCTTATGATATATTTTG
CTCTTATAAACGTGCATCACTTTTAGAACAAAGCTTCAAGGTACATTGAA
TCGGAAGTTTTGAGGTAAAGACATTATCCGGATATAGTTACATTATCAGT
ATGTACTATCTGTTCAATAATAGTGAACATAAATAGTCAATTCCAGAAGA
AATCAGCACTTTTTGATACATTTTTCTTTTTCAAAGCAACGGCAATACAC
CCTTGTCTCCCGGCCCAGGTGGAACTTCTTCCCACAATGGGGATGAAAAT
TGTCTAACGAAATCCGCATGGGAATAGTAATTCTATTGTTCTCATGTCAA
AAAATCGAATGGGGATGGGTTTGGAGTGGAATTTTTCTACATTGAATATC
TGATGGAAATTAAAATAACAAGTCAAGTTACCATATATTAGGGCTGAAAT
TGTTGGGTATTTTCCCACCAGGAGAAAGTTTAGCCAAACATTCCATCTGG
TCTATTACGCGGAGGTCTAACAATATTCATTTCAAATTTTCAGATTTGAT
GGTAAGTGACATTGTATTTGTGGTGATCTTTCTCTTCGTCCCATCTTTAC
CACAAGCGTACTACCTTGTCTCATTTTCGTGGTTTGCACTGTTACTTATA
AATTGGAGTTTCATAAATTGTTGGAATCGTTGGGAAGGAATAAGAATCAT
AAAAGAATGGGGCACAGATGACAACGGTAATCCAAAATGTACCAAGCGGT
ATAGACACTCGATGAAAGAAATCAAGGAAATTCTGGATGAAAATTTACCA
AAGGAGCCGAAAGTGATTGTTCAATGCGAAGCTGTGGAACCTCGAACTTC
GTGCTGCAGAAAACAACGCGTTAGTTGGAGCAATCAGAAAGAGTTTGAAT
TTCAACATTGGATCGATGTGACTGAACAACATTTGGTGAAATCACAAATT
GAAGAAGCGATTTTTGGTGAATTGAAAATTGATTTCGAATTTGATGACGA
AGAAACGAAGGAATCATATGAACAACACGTTCAGAATCTTGTAAAAGAAG
CAAAGCAACATTCTCCACACGCTCAAGTCAACGTCAAGCAACTTTTCCAA
GTCGGTGAAAAAGATATCAAAACCTACAGACGGTCGTTTTATGGCAAGAA
GGCTCTTTTTGGAAGACCATGGGTGTGTCTTCAATGCGTTTTTCCTCAGA
TCGAACTTTCGTTCAAAATATTGAAATGGTTTCTCGAAAAAATTGGCTTC
AAAAGTTTATTGACCAAAGAAATTGTAATCAGAAAAGTAATATCTGACAG
AAATATTGTATCTGTATAGCATTTGTGATCAATAATTTTATACCATTTTG
AATAGTATAACATGGCGAAGACCTGTTCCACGGGACGTTACGGTCTTTGT
GTCTTAAACATTAAGCTATTCAACTTACAGTAAACCAATCAATCTGCTAT
ACAGACCTGTTAGGAAAAATTTATTTACACTATAGCTCTTAAAACATCCA
TCCACGAAAGTTAGAATTTAGAAAATATACAAACTCTTTCAAAATCAGCC
TCTTGAAAACACTTTTCATAAAAGCCAGTAAGTTCGGTTGAAGCTGCG Coding sequence (CDS) from alignment at scaffold_307:84736..86683- >TCONS_00058155 ID=TCONS_00058155|Name=TCONS_00058155|organism=Clytia hemisphaerica|type=CDS|length=771bp|location=Sequence derived from alignment at scaffold_307:84736..86683- (Clytia hemisphaerica)
ATGGTAAGTGACATTGTATTTGTGGTGATCTTTCTCTTCGTCCCATCTTT
ACCACAAGCGTACTACCTTGTCTCATTTTCGTGGTTTGCACTGTTACTTA
TAAATTGGAGTTTCATAAATTGTTGGAATCGTTGGGAAGGAATAAGAATC
ATAAAAGAATGGGGCACAGATGACAACGGTAATCCAAAATGTACCAAGCG
GTATAGACACTCGATGAAAGAAATCAAGGAAATTCTGGATGAAAATTTAC
CAAAGGAGCCGAAAGTGATTGTTCAATGCGAAGCTGTGGAACCTCGAACT
TCGTGCTGCAGAAAACAACGCGTTAGTTGGAGCAATCAGAAAGAGTTTGA
ATTTCAACATTGGATCGATGTGACTGAACAACATTTGGTGAAATCACAAA
TTGAAGAAGCGATTTTTGGTGAATTGAAAATTGATTTCGAATTTGATGAC
GAAGAAACGAAGGAATCATATGAACAACACGTTCAGAATCTTGTAAAAGA
AGCAAAGCAACATTCTCCACACGCTCAAGTCAACGTCAAGCAACTTTTCC
AAGTCGGTGAAAAAGATATCAAAACCTACAGACGGTCGTTTTATGGCAAG
AAGGCTCTTTTTGGAAGACCATGGGTGTGTCTTCAATGCGTTTTTCCTCA
GATCGAACTTTCGTTCAAAATATTGAAATGGTTTCTCGAAAAAATTGGCT
TCAAAAGTTTATTGACCAAAGAAATTGTAATCAGAAAAGTAATATCTGAC
AGAAATATTGTATCTGTATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058155-exon-scaffold_307-1575043694:86507..86683 | TCONS_00058155-exon-scaffold_307-1575043694:86507..86683 | Clytia hemisphaerica | exon |
| TCONS_00058155-exon-scaffold_307-1575043694:86220..86257 | TCONS_00058155-exon-scaffold_307-1575043694:86220..86257 | Clytia hemisphaerica | exon |
| TCONS_00058155-exon-scaffold_307-1575043694:84736..85790 | TCONS_00058155-exon-scaffold_307-1575043694:84736..85790 | Clytia hemisphaerica | exon |
| TCONS_00058155-exon-scaffold_307-1510915933:86507..86683 | TCONS_00058155-exon-scaffold_307-1510915933:86507..86683 | Clytia hemisphaerica | exon |
| TCONS_00058155-exon-scaffold_307-1510915933:86220..86257 | TCONS_00058155-exon-scaffold_307-1510915933:86220..86257 | Clytia hemisphaerica | exon |
| TCONS_00058155-exon-scaffold_307-1510915933:84736..85790 | TCONS_00058155-exon-scaffold_307-1510915933:84736..85790 | Clytia hemisphaerica | exon |
| TCONS_00058155-exon-scaffold_307-1491911889:86507..86683 | TCONS_00058155-exon-scaffold_307-1491911889:86507..86683 | Clytia hemisphaerica | exon |
| TCONS_00058155-exon-scaffold_307-1491911889:86220..86257 | TCONS_00058155-exon-scaffold_307-1491911889:86220..86257 | Clytia hemisphaerica | exon |
| TCONS_00058155-exon-scaffold_307-1491911889:84736..85790 | TCONS_00058155-exon-scaffold_307-1491911889:84736..85790 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_307 | supercontig | scaffold_307:84736..86683 - |
Blast
The following BLAST results are available for this feature:
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