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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058128 ID=TCONS_00058128|Name=TCONS_00058128|organism=Clytia hemisphaerica|type=transcript|length=1913bp
aaaaGGTTCTCCTCAAcaagttttgattttaatttaacATCCCGTCGCTG
ACGTATCAAGTTAGGATTTCATAAATTGCAATACGGAAtaaattatcatt
attttttgggGACTTTGAGGCAAATTACATCACTTATATCATTTTATTGA
GCAAAAGGTAAAATTATTTCGGATAAAGATATGGGAGTTAATGAAGTGGC
AGATCGCAACAGTCCACCAGCATTAAACATGGAGACTCTACTGCAAAACA
AATCAGACATCAAATTGAACGGAAGCACAGGAAAATATACCGAAGATGtg
caagaagaagaagattATGACTTTTACCGATTCATTGTATCTGATTTCCA
TGGCATTGCTCGCAGCAAGTTGGTTACCAAATCTGCGTATAAATACATGA
AGAAACGAGGTCCTGGAATCGCCTGGAAAACCGTTTTGTTGTCCTTCGAT
AACTACTTCAATTGTGAAGCGAAAAGGTTGGATGGAGAAAGATGTACTGA
TGCTAGGTTAACTCCAGCTGAAGATTTGAGCGTGCCGCGATCACTTCCTT
GGGCAGGAGAAGGGTATAAGATTGCAGGTGTTTTGTGTGAGACATGGTGG
GGTATTGATGGGTTGCGACAACAAGCGTGCCCACGATACATGGCGCGTCG
ACTATGTGATCAACTAGAATCGGAATTTGGTCTTCGCATTTTCCACGGTA
CCGAGATGGAGTTCACCTTGTTCAAAGAAAAGGGTGTGCCAGAGTTCGAT
GATGGTGGTTTGTACATTCCACAGGAGTTGGATACAGTGTGCAAAGAACT
TCTCCCGTTATCCAAACACTGTGAAGCTGCTGGTATCCCTATTGAAACAT
TGCAAACTGAATTCGGTCCTGGACAGTTGGAGgtTGTTTTAAAACCAGCA
TACGGAATCGAGGGAGCAGACAACAGTTTCTTATTCAAATGTGCAGCTAA
AGAAATCCTTGCAAAACCTGGCTTCCATGGACGCGCAACATTTATGTCTA
AACCAATCATCGACAAAGTTGGAAGCTCCAACCATTTCAATCACTCTCTT
TGGAAAGTAAAGGACAATGGTGAACTAGAAGACTCGATGTGGGATGGAAC
ACAGGAGAGTAAACTAACCAAGACTGCTCAACACTGGCTGGCTGGAATTC
TCAAACACACACCAGCCCTCGCAGccatttttaaCCCCACTGTCAATGAT
TGGAGAAGATTACATATCACAGCTAGTACTCGCGATATCACCACTCCACA
TTACATCACGTGGGGTATCGAAAACCGATTAACATTGATCCGCGTTATCG
CCCGAGGCGCCGGTAAAGCTACATATCTGGAGAACCGGTTACCCGGGGCA
ACCATGAATCCGTATCTTGCACTGGCCGGTATGGTTGCTGCCGGTATTGA
TGGTATCCGGAACAAAATCGAATTACCGGCTCCTGGAAATACGGAAAATG
AATTCGGAGTTTTGCCAGGTACTCTTGAAGAGGCTTTGGATGCACTGAAG
AGTAGTAGTGTCATGCGCGAGCATCTTGGTGATGAATTTGTCAATTGGTT
TGTGTGTGCCAAGGAGAAAGAAATCGAAGTCTTGAATGAATACACAGATA
AGAATGGGGGCGATTCTTTCCAAACTGAAGTTGACTTCTATTCCAAATGG
ATCTAAATTGTGTTTTAATGTTACTGTTTTATTTTAATATCTTTAtctgg
aaaaaaagaaagaaagaaaagactGTATTCTAAAAGCTAATCACGTGTCA
AAGAGACATTATAAGGAACTATCAATTCTTGGAAATGAAAATGTAgaata
gaaatattttaaatttatatGATAAAGCAAAGAAAACACCACACTGCATT
TTATAGATGTAAAAGGGGAGCTGGCCATAATAGGGAAACTACCTTTTTGA
AGGAACAATCTTT Run BLAST on NCBI protein sequence of TCONS_00058128-protein >TCONS_00058128-protein ID=TCONS_00058128-protein|Name=TCONS_00058128-protein|organism=Clytia hemisphaerica|type=polypeptide|length=491bp
MGVNEVADRNSPPALNMETLLQNKSDIKLNGSTGKYTEDVQEEEDYDFYR
FIVSDFHGIARSKLVTKSAYKYMKKRGPGIAWKTVLLSFDNYFNCEAKRL
DGERCTDARLTPAEDLSVPRSLPWAGEGYKIAGVLCETWWGIDGLRQQAC
PRYMARRLCDQLESEFGLRIFHGTEMEFTLFKEKGVPEFDDGGLYIPQEL
DTVCKELLPLSKHCEAAGIPIETLQTEFGPGQLEVVLKPAYGIEGADNSF
LFKCAAKEILAKPGFHGRATFMSKPIIDKVGSSNHFNHSLWKVKDNGELE
DSMWDGTQESKLTKTAQHWLAGILKHTPALAAIFNPTVNDWRRLHITAST
RDITTPHYITWGIENRLTLIRVIARGAGKATYLENRLPGATMNPYLALAG
MVAAGIDGIRNKIELPAPGNTENEFGVLPGTLEEALDALKSSSVMREHLG
DEFVNWFVCAKEKEIEVLNEYTDKNGGDSFQTEVDFYSKWI Run BLAST on NCBI transcript from alignment at scaffold_307:131289..138467+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058128 ID=TCONS_00058128|Name=TCONS_00058128|organism=Clytia hemisphaerica|type=transcript|length=7179bp|location=Sequence derived from alignment at scaffold_307:131289..138467+ (Clytia hemisphaerica)
aaaaGGTTCTCCTCAAcaagttttgattttaatttaacATCCCGTCGCTG
ACGTATCAAGTTAGGATTTCATAAATTGCAATACGGAAtaaattatcatt
attttttgggGACTTTGAGGCAAATTACATCACTTATATCATTTTATTGA
GCAAAAGGTAAAATTATTTCGGATAAAGATATGGGAGTTAATGAAGTGGC
AGATCGCAACAGTCCACCAGCATTAAACATGGAGACTCTACTGCAAAACA
AATCAGACATCAAATTGAACGGAAGCACAGGAAAATATACCGAAGATGtg
caagaagaagaagattATGACTTTTACCGATTCATTGTATCTGATTTCCA
TGGCATTGCTCGCAGCAAGTTGGTTACCAAATCTGCGTATAAATACATGA
AGAAACGAGGTCCTGGAATCGCCTGGAAAACCGTTTTGTTGTCCTTCGAT
AACTACTTCAATTGTGAAGCGAAAAGGTTGGATGGAGAAAGATGTACTGA
TGCTAGGTTAACTCCAGCTGAAGATTTGAGCGTGCCGCGATCACTTCCTT
GGGCAGGAGAAGGGTATAAGATTGCAGGTGTTTTGTGTGAGACATGGTGG
GGTATTGATGGGTTGCGACAACAAGCGTGCCCACGATACATGGCGCGTCG
ACTATGTGATCAACTAGAATCGGAATTTGGTCTTCGCATTTTCCACGGTA
CCGAGATGGAGTTCACCTTGTTCAAAGAAAAGGGTGTGCCAGAGTTCGAT
GATGGTGGTTTGTACATTCCACAGGAGTTGGATACAGTGTGCAAAGAACT
TCTCCCGTTATCCAAACACTGTGAAGCTGCTGGTATCCCTATTGAAACAT
TGCAAACTGAATTCGGTCCTGGACAGTTGGAGGTAGGCTTTAGTTTTTCC
TTTTCCTCTTTGGTAAAATTTCCCTTCATCAGTCACCTATGTCTCACTGT
TTGAAGCTTGAGATTTCTGTGATAAAGCTTGACTAACTATACGTTTCTTT
AGTAGAAGATTTTCCGGTAAAATATGACAAAAGCGTGGACCTTCAACTCA
AGTCACATATAGGATCTTTCAGTGCAAATTAAGTTTCAAAAGCTAAATGA
TAACACAGTAATAGAAATCTAAGAAAAGGAGACGAGATTCTTCATACAGA
AAAAGGGATAGGTTGATTCAACCGTGGATGTTATATGGTGATcaagactt
tacaaataaatatcccttatttttttctttaggtTGTTTTAAAACCAGCA
TACGGAATCGAGGGAGCAGACAACAGTTTCTTATTCAAATGTGCAGCTAA
AGAAATCCTTGCAAAACCTGGCTTCCATGGACGCGCAACATTTATGTCTA
AACCAATCATCGACAAAGTTGGAAGCTCCAACCATTTCAATCACTCTCTT
TGGAAAGTAGGTTTAGTACTTTTTAGTTATTAAAGAATATCATATGTTTC
TAAGATTTTATGTTTTGTGAGGTGAATGGAATATGAAGGGGCAGGGTTCG
AACCCAGGAAAAGCGTGGTAAGAATTATATGGTCGCCAAGTAACACTGCC
TCACTGCCCTGGTGgaaattttttcctcagtggggataaaaattcctatt
gaaattccaattgGGATATAAATTTCATTGTTGCAAGGTTGAAAAAtaca
gtggggatggttttggagtgcaaacGGGACGAAAGAGGGacgaaaatttt
gccaaattttttcATGGGGCTGggatcccagtgggtctgtaacACAGGGG
TGTAGTAACTATCAAGAAAAATACTCTATCGGATTGTGCGAAAGATCCTC
CTTGTTATGGGCCATATTATTTTTCTTGAAGGTGTAGTGAAGGTGTAACT
TCTCGGTCGAGGTCAGGTCTCTCTTAAGAAAACTGTGCATTATTATCAAA
ACGTAGTAATAGAAACAACAAACTTTTCTTAAACACTCTATTTCAGGTAA
AGGACAATGGTGAACTAGAAGACTCGATGTGGGATGGAACACAGGAGAGT
AAACTAACCAAGACTGCTCAACACTGGCTGGCTGGAATTCTCAAACACAC
ACCAGCCCTCGCAGGTAACCTATCGTCATAGCACACCAAAATTGAAAGTC
ACACTTATGTGTATtatcaagaaaaaattcaaaattcttaaGACCATAAA
AAACGGTTGATTTGAGATAACAATCATGGCATTCTTAAATATAGAAACAT
TTTTTCGAAATGGTGCTTATGGTGACGTGAATGTATAAATGggtgaaatt
taatttttcgtACAACCTTTGTTATCTCGGACAATCTTCGGCAGGATATG
TCCTTTTTACAAATATCTTatggaaaatatcaaaatgatcAACTGATGAT
GAAGGGGCAAAATATCATATGACTATGAGCAATTTATGAAAAACTTCATG
AACATTTGAATTACCAAAATACATTTTGAGGTTAACAAACACCTAAATTT
AAACcacattttctttcattttcagccatttttaaCCCCACTGTCAATGA
TTGGAGAAGATTACATATCACAGCTAGTACTCGCGATATCAGTAAGTCTT
GTGACAAATACCCATAATGCCCTCGCAAAATTAAAACCCAAAATTTCTAA
GGTGTTCAAAAGGTTTTCTCGAGTAAGTCTGCCACCACATTGGGCGACCC
AAAAGGTTCCTCTTTTGACATACCAAAAGGTATGGGAGGTGCCACACTCC
GTTTCTTCACTACGTCTTTTCTCTCGAATACCCATTTTctagtaaaacaa
aaaatttcagatGTCTCCTTAGCCGGTGACTACAGCATAATAAAATCACT
CAAAAGCTCTTACCTCAAAAGTTTAGCAGCTTTGATTTTACATCGAATAG
CCTATCGTTTGAAGTCTTTCAACCTTTAAAAACGGGATAGAAAACCTTAG
AATTGAAAAGAAACTCAATACTCCCGACACGGTTACTTTTGAATAATAAc
gtaattttattaaaataatatCACGTTGTCAACAGAACAAAGCATTGAGC
TTTAAGCCCTGAAGGAATCTGTTGGAACCTCTTTCTGTCTGGGCTTTAAA
CCCAGTTGAATAAAGAACCCGAACCACTCCAGCCTTCTAAACAGTTATAA
ATATATAAACATACTCACCGTGAATAAATTCTTTTTTAGCCACTCCACAT
TACATCACATGGGGTATCGAAAACCGATTAACATTGATTCGTGTTATTGC
TCGAGGTGCTGGTAAAGCTACATATCTAGAAAACCGGTTACCCGGGGCAA
CCATGAATCCGTATCTTGCACTGGCTGGTATGGTTGCTGCCGGTATTGAT
GGTATCCGGAACAAAATCGAATTACCGGCTCCTGGAAATACGGAAAATGA
ATTCGGAGTTTTGCCAGGTACTCTTGAAGAGGCTTTGGATGCNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTT
CTTCTAAACACATgcaaaatcaggcaaaaactTGCTTTCTTGAACAAAGT
AGCGCTTTTTTGAACGAAGTAGCCTTACTGTCAAGAATGATTGTGAATAA
TCGCtaggtaggaaattaaaatgctagggtgaaaagtttccttttgagtt
gttcttcaaaatgaacATTATTTTGGGACCCCGGTCCAGGCCCTGCGATG
CCGGTTTTGGTCCATAGGCTAGGGCTAAGTAGAAGGTTTGAAAATCTTCA
ATATTCTTAAtataaatatttctttataaattaaaatgaaaaacaagcGA
TGTACCAGATCTCATTCTTTAATATATAAAGCTCGCGTTTAAAAATCTCA
ATATTTACAAAATCACACAAAATCATACAAAAAACGGTCCCAAAAACCAA
CAGCCTGAGAAAAATATATTAGATTTCTATAATACAAGTTTGTAGTGCAT
AAAAATTACACTATAATAAAATTGTTAAGGCGTAGCAATTATTGAAAAAG
CAATCATTGGGAAGCTTGGAATGTCTTAACAATAATTGTATAGACCAATG
AAAATGTAGCGAAAAGCACAGATGATCATTacagatttttgtttatttga
ccAGAAAGTTACCAATAGCTAGGATACCATATGAGATAATTTAAGGATAT
GTTGTGTATGAATAGTTGTAAACAGTATCATTAAAAATGTAATATATAAA
TGTGCATGTGATTAAAAGGGTTAGTTATAAACATTACAATTACATACAAA
ATAAGCCACGAATaaatcatttcatttcatttatatatataaaaaatttc
ccccaaaaaatgAGTCGGTCAATAAACAGGGTAAggtatgaagaaaaaga
aaatacaaatcttcctaaaaaaatactgtataaaggcttggggacacaag
aagttttttttcgcatTAGTGCAATGCAACATACTTCATctcaccaacct
gaaacgctttctcgtgtcttcaccccatttttctttcgaccaataaaagt
gaaatctcacttttgtccctgggacagtGGAACAAAATtaattcgaatca
attttgctccattgtcccaggggcAAAagcagcgtgtcttttgggtattt
ccctcactttttgtcccatgaaacaaaaacaaaaaaccatggggaacgca
ctttttttcttgtgttgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTTAGAATTGAAAAGAAACTCAATACTCCCGACACGGT
TACTTTTGAATAATAACGTAATTTTGTTAAAATAATATCACGTTGTCAAC
AGAACAAAGCATTGAGCTTTAAGCCCTGAAGGAATCTGTTGGAACCTCTT
TCTGTCTGGGCTTTAAACTCAGTTGAATAAAGATCCCGAACCACTCCAGC
CTTCTAAACAGTTATAAATATATAAACACACTCACCGTGAATAAATTCAT
TTTTAGCCACTCCACATTACATCACGTGGGGTATCGAAAACCGATTAACA
TTGATCCGCGTTATCGCCCGAGGCGCCGGTAAAGCTACATATCTGGAGAA
CCGGTTACCCGGGGCAACCATGAATCCGTATCTTGCACTGGCCGGTATGG
TTGCTGCCGGTATTGATGGTATCCGGAACAAAATCGAATTACCGGCTCCT
GGAAATACGGAAAATGAATTCGGAGTTTTGCCAGGTACTCTTGAAGAGGC
TTTGGATGCACTGAAGAGTAGTAGTGTCATGCGCGAGCATCTTGGTGATG
AATTTGTCAATTGGTTTGTGTGTGCCAAGGAGAAAGAAATCGAAGTCTTG
AATGAATACACAGATAAGAATGGGGGCGATTCTTTCCAAACTGAAGTTGA
CTTCTATTCCAAATGGATCTAAATTGTGTTTTAATGTTACTGTTTTATTT
TAATATCTTTAtctggaaaaaaagaaagaaagaaaagactGTATTCTAAA
AGCTAATCACGTGTCAAAGAGACATTATAAGGAACTATCAATTCTTGGAA
ATGAAAATGTAgaatagaaatattttaaatttatatGATAAAGCAAAGAA
AACACCACACTGCATTTTATAGATGTAAAAGGGGAGCTGGCCATAATAGG
GAAACTACCTTTTTGAAGGAACAATCTTT Coding sequence (CDS) from alignment at scaffold_307:131289..138467+ >TCONS_00058128 ID=TCONS_00058128|Name=TCONS_00058128|organism=Clytia hemisphaerica|type=CDS|length=8856bp|location=Sequence derived from alignment at scaffold_307:131289..138467+ (Clytia hemisphaerica)
ATGGGAGTTAATGAAGTGGCAGATCGCAACAGTCCACCAGCATTAAACAT
GGAGACTCTACTGCAAAACAAATCAGACATCAAATTGAACGGAAGCACAG
GAAAATATACCGAAGATGtgcaagaagaagaagattATGACTTTTACCGA
TTCATTGTATCTGATTTCCATGGCATTGCTCGCAGCAAGTTGGTTACCAA
ATCTGCGTATAAATACATGAAGAAACGAGGTCCTGGAATCGCCTGGAAAA
CCGTTTTGTTGTCCTTCGATAACTACTTCAATTGTGAAGCGAAAAGGTTG
GATGGAGAAAGATGTACTGATGCTAGGTTAACTCCAGCTGAAGATTTGAG
CGTGCCGCGATCACTTCCTTGGGCAGGAGAAGGGTATAAGATTGCAGGTG
TTTTGTGTGAGACATGGTGGGGTATTGATGGGTTGCGACAACAAGCGTGC
CCACGATACATGGCGCGTCGACTATGTGATCAACTAGAATCGGAATTTGG
TCTTCGCATTTTCCACGGTACCGAGATGGAGTTCACCTTGTTCAAAGAAA
AGGGTGTGCCAGAGTTCGATGATGGTGGTTTGTACATTCCACAGGAGTTG
GATACAGTGTGCAAAGAACTTCTCCCGTTATCCAAACACTGTGAAGCTGC
TGGTATCCCTATTGAAACATTGCAAACTGAATTCGGTCCTGGACAGTTGG
AGgtTGTTTTAAAACCAGCATACGGAATCGAGGGAGCAGACAACAGTTTC
TTATTCAAATGTGCAGCTAAAGAAATCCTTGCAAAACCTGGCTTCCATGG
ACGCGCAACATTTATGTCTAAACCAATCATCGACAAAGTTGGAAGCTCCA
ACCATTTCAATCACTCTCTTTGGAAAGTAAAGGACAATGGTGAACTAGAA
GACTCGATGTGGGATGGAACACAGGAGAGTAAACTAACCAAGACTGCTCA
ACACTGGCTGGCTGGAATTCTCAAACACACACCAGCCCTCGCAGccattt
ttaaCCCCACTGTCAATGATTGGAGAAGATTACATATCACAGCTAGTACT
CGCGATATCACCACTCCACATTACATCACGTGGGGTATCGAAAACCGATT
AACATTGATCCGCGTTATCGCCCGAGGCGCCGGTAAAGCTACATATCTGG
AGAACCGGTTACCCGGGGCAACCATGAATCCGTATCTTGCACTGGCCGGT
ATGGTTGCTGCCGGTATTGATGGTATCCGGAACAAAATCGAATTACCGGC
TCCTGGAAATACGGAAAATGAATTCGGAGTTTTGCCAGGTACTCTTGAAG
AGGCTTTGGATGCACTGAAGAGTAGTAGTGTCATGCGCGAGCATCTTGGT
GATGAATTTGTCAATTGGTTTGTGTGTGCCAAGGAGAAAGAAATCGAAGT
CTTGAATGAATACACAGATAAGAATGGGGGCGATTCTTTCCAAACTGAAG
TTGACTTCTATTCCAAATGGATCTAAATGGGAGTTAATGAAGTGGCAGAT
CGCAACAGTCCACCAGCATTAAACATGGAGACTCTACTGCAAAACAAATC
AGACATCAAATTGAACGGAAGCACAGGAAAATATACCGAAGATGtgcaag
aagaagaagattATGACTTTTACCGATTCATTGTATCTGATTTCCATGGC
ATTGCTCGCAGCAAGTTGGTTACCAAATCTGCGTATAAATACATGAAGAA
ACGAGGTCCTGGAATCGCCTGGAAAACCGTTTTGTTGTCCTTCGATAACT
ACTTCAATTGTGAAGCGAAAAGGTTGGATGGAGAAAGATGTACTGATGCT
AGGTTAACTCCAGCTGAAGATTTGAGCGTGCCGCGATCACTTCCTTGGGC
AGGAGAAGGGTATAAGATTGCAGGTGTTTTGTGTGAGACATGGTGGGGTA
TTGATGGGTTGCGACAACAAGCGTGCCCACGATACATGGCGCGTCGACTA
TGTGATCAACTAGAATCGGAATTTGGTCTTCGCATTTTCCACGGTACCGA
GATGGAGTTCACCTTGTTCAAAGAAAAGGGTGTGCCAGAGTTCGATGATG
GTGGTTTGTACATTCCACAGGAGTTGGATACAGTGTGCAAAGAACTTCTC
CCGTTATCCAAACACTGTGAAGCTGCTGGTATCCCTATTGAAACATTGCA
AACTGAATTCGGTCCTGGACAGTTGGAGgtTGTTTTAAAACCAGCATACG
GAATCGAGGGAGCAGACAACAGTTTCTTATTCAAATGTGCAGCTAAAGAA
ATCCTTGCAAAACCTGGCTTCCATGGACGCGCAACATTTATGTCTAAACC
AATCATCGACAAAGTTGGAAGCTCCAACCATTTCAATCACTCTCTTTGGA
AAGTAAAGGACAATGGTGAACTAGAAGACTCGATGTGGGATGGAACACAG
GAGAGTAAACTAACCAAGACTGCTCAACACTGGCTGGCTGGAATTCTCAA
ACACACACCAGCCCTCGCAGccatttttaaCCCCACTGTCAATGATTGGA
GAAGATTACATATCACAGCTAGTACTCGCGATATCACCACTCCACATTAC
ATCACGTGGGGTATCGAAAACCGATTAACATTGATCCGCGTTATCGCCCG
AGGCGCCGGTAAAGCTACATATCTGGAGAACCGGTTACCCGGGGCAACCA
TGAATCCGTATCTTGCACTGGCCGGTATGGTTGCTGCCGGTATTGATGGT
ATCCGGAACAAAATCGAATTACCGGCTCCTGGAAATACGGAAAATGAATT
CGGAGTTTTGCCAGGTACTCTTGAAGAGGCTTTGGATGCACTGAAGAGTA
GTAGTGTCATGCGCGAGCATCTTGGTGATGAATTTGTCAATTGGTTTGTG
TGTGCCAAGGAGAAAGAAATCGAAGTCTTGAATGAATACACAGATAAGAA
TGGGGGCGATTCTTTCCAAACTGAAGTTGACTTCTATTCCAAATGGATCT
AAATGGGAGTTAATGAAGTGGCAGATCGCAACAGTCCACCAGCATTAAAC
ATGGAGACTCTACTGCAAAACAAATCAGACATCAAATTGAACGGAAGCAC
AGGAAAATATACCGAAGATGtgcaagaagaagaagattATGACTTTTACC
GATTCATTGTATCTGATTTCCATGGCATTGCTCGCAGCAAGTTGGTTACC
AAATCTGCGTATAAATACATGAAGAAACGAGGTCCTGGAATCGCCTGGAA
AACCGTTTTGTTGTCCTTCGATAACTACTTCAATTGTGAAGCGAAAAGGT
TGGATGGAGAAAGATGTACTGATGCTAGGTTAACTCCAGCTGAAGATTTG
AGCGTGCCGCGATCACTTCCTTGGGCAGGAGAAGGGTATAAGATTGCAGG
TGTTTTGTGTGAGACATGGTGGGGTATTGATGGGTTGCGACAACAAGCGT
GCCCACGATACATGGCGCGTCGACTATGTGATCAACTAGAATCGGAATTT
GGTCTTCGCATTTTCCACGGTACCGAGATGGAGTTCACCTTGTTCAAAGA
AAAGGGTGTGCCAGAGTTCGATGATGGTGGTTTGTACATTCCACAGGAGT
TGGATACAGTGTGCAAAGAACTTCTCCCGTTATCCAAACACTGTGAAGCT
GCTGGTATCCCTATTGAAACATTGCAAACTGAATTCGGTCCTGGACAGTT
GGAGgtTGTTTTAAAACCAGCATACGGAATCGAGGGAGCAGACAACAGTT
TCTTATTCAAATGTGCAGCTAAAGAAATCCTTGCAAAACCTGGCTTCCAT
GGACGCGCAACATTTATGTCTAAACCAATCATCGACAAAGTTGGAAGCTC
CAACCATTTCAATCACTCTCTTTGGAAAGTAAAGGACAATGGTGAACTAG
AAGACTCGATGTGGGATGGAACACAGGAGAGTAAACTAACCAAGACTGCT
CAACACTGGCTGGCTGGAATTCTCAAACACACACCAGCCCTCGCAGccat
ttttaaCCCCACTGTCAATGATTGGAGAAGATTACATATCACAGCTAGTA
CTCGCGATATCACCACTCCACATTACATCACGTGGGGTATCGAAAACCGA
TTAACATTGATCCGCGTTATCGCCCGAGGCGCCGGTAAAGCTACATATCT
GGAGAACCGGTTACCCGGGGCAACCATGAATCCGTATCTTGCACTGGCCG
GTATGGTTGCTGCCGGTATTGATGGTATCCGGAACAAAATCGAATTACCG
GCTCCTGGAAATACGGAAAATGAATTCGGAGTTTTGCCAGGTACTCTTGA
AGAGGCTTTGGATGCACTGAAGAGTAGTAGTGTCATGCGCGAGCATCTTG
GTGATGAATTTGTCAATTGGTTTGTGTGTGCCAAGGAGAAAGAAATCGAA
GTCTTGAATGAATACACAGATAAGAATGGGGGCGATTCTTTCCAAACTGA
AGTTGACTTCTATTCCAAATGGATCTAAATGGGAGTTAATGAAGTGGCAG
ATCGCAACAGTCCACCAGCATTAAACATGGAGACTCTACTGCAAAACAAA
TCAGACATCAAATTGAACGGAAGCACAGGAAAATATACCGAAGATGtgca
agaagaagaagattATGACTTTTACCGATTCATTGTATCTGATTTCCATG
GCATTGCTCGCAGCAAGTTGGTTACCAAATCTGCGTATAAATACATGAAG
AAACGAGGTCCTGGAATCGCCTGGAAAACCGTTTTGTTGTCCTTCGATAA
CTACTTCAATTGTGAAGCGAAAAGGTTGGATGGAGAAAGATGTACTGATG
CTAGGTTAACTCCAGCTGAAGATTTGAGCGTGCCGCGATCACTTCCTTGG
GCAGGAGAAGGGTATAAGATTGCAGGTGTTTTGTGTGAGACATGGTGGGG
TATTGATGGGTTGCGACAACAAGCGTGCCCACGATACATGGCGCGTCGAC
TATGTGATCAACTAGAATCGGAATTTGGTCTTCGCATTTTCCACGGTACC
GAGATGGAGTTCACCTTGTTCAAAGAAAAGGGTGTGCCAGAGTTCGATGA
TGGTGGTTTGTACATTCCACAGGAGTTGGATACAGTGTGCAAAGAACTTC
TCCCGTTATCCAAACACTGTGAAGCTGCTGGTATCCCTATTGAAACATTG
CAAACTGAATTCGGTCCTGGACAGTTGGAGgtTGTTTTAAAACCAGCATA
CGGAATCGAGGGAGCAGACAACAGTTTCTTATTCAAATGTGCAGCTAAAG
AAATCCTTGCAAAACCTGGCTTCCATGGACGCGCAACATTTATGTCTAAA
CCAATCATCGACAAAGTTGGAAGCTCCAACCATTTCAATCACTCTCTTTG
GAAAGTAAAGGACAATGGTGAACTAGAAGACTCGATGTGGGATGGAACAC
AGGAGAGTAAACTAACCAAGACTGCTCAACACTGGCTGGCTGGAATTCTC
AAACACACACCAGCCCTCGCAGccatttttaaCCCCACTGTCAATGATTG
GAGAAGATTACATATCACAGCTAGTACTCGCGATATCACCACTCCACATT
ACATCACGTGGGGTATCGAAAACCGATTAACATTGATCCGCGTTATCGCC
CGAGGCGCCGGTAAAGCTACATATCTGGAGAACCGGTTACCCGGGGCAAC
CATGAATCCGTATCTTGCACTGGCCGGTATGGTTGCTGCCGGTATTGATG
GTATCCGGAACAAAATCGAATTACCGGCTCCTGGAAATACGGAAAATGAA
TTCGGAGTTTTGCCAGGTACTCTTGAAGAGGCTTTGGATGCACTGAAGAG
TAGTAGTGTCATGCGCGAGCATCTTGGTGATGAATTTGTCAATTGGTTTG
TGTGTGCCAAGGAGAAAGAAATCGAAGTCTTGAATGAATACACAGATAAG
AATGGGGGCGATTCTTTCCAAACTGAAGTTGACTTCTATTCCAAATGGAT
CTAAATGGGAGTTAATGAAGTGGCAGATCGCAACAGTCCACCAGCATTAA
ACATGGAGACTCTACTGCAAAACAAATCAGACATCAAATTGAACGGAAGC
ACAGGAAAATATACCGAAGATGtgcaagaagaagaagattATGACTTTTA
CCGATTCATTGTATCTGATTTCCATGGCATTGCTCGCAGCAAGTTGGTTA
CCAAATCTGCGTATAAATACATGAAGAAACGAGGTCCTGGAATCGCCTGG
AAAACCGTTTTGTTGTCCTTCGATAACTACTTCAATTGTGAAGCGAAAAG
GTTGGATGGAGAAAGATGTACTGATGCTAGGTTAACTCCAGCTGAAGATT
TGAGCGTGCCGCGATCACTTCCTTGGGCAGGAGAAGGGTATAAGATTGCA
GGTGTTTTGTGTGAGACATGGTGGGGTATTGATGGGTTGCGACAACAAGC
GTGCCCACGATACATGGCGCGTCGACTATGTGATCAACTAGAATCGGAAT
TTGGTCTTCGCATTTTCCACGGTACCGAGATGGAGTTCACCTTGTTCAAA
GAAAAGGGTGTGCCAGAGTTCGATGATGGTGGTTTGTACATTCCACAGGA
GTTGGATACAGTGTGCAAAGAACTTCTCCCGTTATCCAAACACTGTGAAG
CTGCTGGTATCCCTATTGAAACATTGCAAACTGAATTCGGTCCTGGACAG
TTGGAGgtTGTTTTAAAACCAGCATACGGAATCGAGGGAGCAGACAACAG
TTTCTTATTCAAATGTGCAGCTAAAGAAATCCTTGCAAAACCTGGCTTCC
ATGGACGCGCAACATTTATGTCTAAACCAATCATCGACAAAGTTGGAAGC
TCCAACCATTTCAATCACTCTCTTTGGAAAGTAAAGGACAATGGTGAACT
AGAAGACTCGATGTGGGATGGAACACAGGAGAGTAAACTAACCAAGACTG
CTCAACACTGGCTGGCTGGAATTCTCAAACACACACCAGCCCTCGCAGcc
atttttaaCCCCACTGTCAATGATTGGAGAAGATTACATATCACAGCTAG
TACTCGCGATATCACCACTCCACATTACATCACGTGGGGTATCGAAAACC
GATTAACATTGATCCGCGTTATCGCCCGAGGCGCCGGTAAAGCTACATAT
CTGGAGAACCGGTTACCCGGGGCAACCATGAATCCGTATCTTGCACTGGC
CGGTATGGTTGCTGCCGGTATTGATGGTATCCGGAACAAAATCGAATTAC
CGGCTCCTGGAAATACGGAAAATGAATTCGGAGTTTTGCCAGGTACTCTT
GAAGAGGCTTTGGATGCACTGAAGAGTAGTAGTGTCATGCGCGAGCATCT
TGGTGATGAATTTGTCAATTGGTTTGTGTGTGCCAAGGAGAAAGAAATCG
AAGTCTTGAATGAATACACAGATAAGAATGGGGGCGATTCTTTCCAAACT
GAAGTTGACTTCTATTCCAAATGGATCTAAATGGGAGTTAATGAAGTGGC
AGATCGCAACAGTCCACCAGCATTAAACATGGAGACTCTACTGCAAAACA
AATCAGACATCAAATTGAACGGAAGCACAGGAAAATATACCGAAGATGtg
caagaagaagaagattATGACTTTTACCGATTCATTGTATCTGATTTCCA
TGGCATTGCTCGCAGCAAGTTGGTTACCAAATCTGCGTATAAATACATGA
AGAAACGAGGTCCTGGAATCGCCTGGAAAACCGTTTTGTTGTCCTTCGAT
AACTACTTCAATTGTGAAGCGAAAAGGTTGGATGGAGAAAGATGTACTGA
TGCTAGGTTAACTCCAGCTGAAGATTTGAGCGTGCCGCGATCACTTCCTT
GGGCAGGAGAAGGGTATAAGATTGCAGGTGTTTTGTGTGAGACATGGTGG
GGTATTGATGGGTTGCGACAACAAGCGTGCCCACGATACATGGCGCGTCG
ACTATGTGATCAACTAGAATCGGAATTTGGTCTTCGCATTTTCCACGGTA
CCGAGATGGAGTTCACCTTGTTCAAAGAAAAGGGTGTGCCAGAGTTCGAT
GATGGTGGTTTGTACATTCCACAGGAGTTGGATACAGTGTGCAAAGAACT
TCTCCCGTTATCCAAACACTGTGAAGCTGCTGGTATCCCTATTGAAACAT
TGCAAACTGAATTCGGTCCTGGACAGTTGGAGgtTGTTTTAAAACCAGCA
TACGGAATCGAGGGAGCAGACAACAGTTTCTTATTCAAATGTGCAGCTAA
AGAAATCCTTGCAAAACCTGGCTTCCATGGACGCGCAACATTTATGTCTA
AACCAATCATCGACAAAGTTGGAAGCTCCAACCATTTCAATCACTCTCTT
TGGAAAGTAAAGGACAATGGTGAACTAGAAGACTCGATGTGGGATGGAAC
ACAGGAGAGTAAACTAACCAAGACTGCTCAACACTGGCTGGCTGGAATTC
TCAAACACACACCAGCCCTCGCAGccatttttaaCCCCACTGTCAATGAT
TGGAGAAGATTACATATCACAGCTAGTACTCGCGATATCACCACTCCACA
TTACATCACGTGGGGTATCGAAAACCGATTAACATTGATCCGCGTTATCG
CCCGAGGCGCCGGTAAAGCTACATATCTGGAGAACCGGTTACCCGGGGCA
ACCATGAATCCGTATCTTGCACTGGCCGGTATGGTTGCTGCCGGTATTGA
TGGTATCCGGAACAAAATCGAATTACCGGCTCCTGGAAATACGGAAAATG
AATTCGGAGTTTTGCCAGGTACTCTTGAAGAGGCTTTGGATGCACTGAAG
AGTAGTAGTGTCATGCGCGAGCATCTTGGTGATGAATTTGTCAATTGGTT
TGTGTGTGCCAAGGAGAAAGAAATCGAAGTCTTGAATGAATACACAGATA
AGAATGGGGGCGATTCTTTCCAAACTGAAGTTGACTTCTATTCCAAATGG
ATCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058128-exon-scaffold_307-1491911889:131289..132170 | TCONS_00058128-exon-scaffold_307-1491911889:131289..132170 | Clytia hemisphaerica | exon |
| TCONS_00058128-exon-scaffold_307-1510915933:131289..132170 | TCONS_00058128-exon-scaffold_307-1510915933:131289..132170 | Clytia hemisphaerica | exon |
| TCONS_00058128-exon-scaffold_307-1575043694:131289..132170 | TCONS_00058128-exon-scaffold_307-1575043694:131289..132170 | Clytia hemisphaerica | exon |
| TCONS_00058128-exon-scaffold_307-1491911889:132521..132694 | TCONS_00058128-exon-scaffold_307-1491911889:132521..132694 | Clytia hemisphaerica | exon |
| TCONS_00058128-exon-scaffold_307-1510915933:132521..132694 | TCONS_00058128-exon-scaffold_307-1510915933:132521..132694 | Clytia hemisphaerica | exon |
| TCONS_00058128-exon-scaffold_307-1575043694:132521..132694 | TCONS_00058128-exon-scaffold_307-1575043694:132521..132694 | Clytia hemisphaerica | exon |
| TCONS_00058128-exon-scaffold_307-1491911889:133235..133352 | TCONS_00058128-exon-scaffold_307-1491911889:133235..133352 | Clytia hemisphaerica | exon |
| TCONS_00058128-exon-scaffold_307-1510915933:133235..133352 | TCONS_00058128-exon-scaffold_307-1510915933:133235..133352 | Clytia hemisphaerica | exon |
| TCONS_00058128-exon-scaffold_307-1575043694:133235..133352 | TCONS_00058128-exon-scaffold_307-1575043694:133235..133352 | Clytia hemisphaerica | exon |
| TCONS_00058128-exon-scaffold_307-1491911889:133764..133829 | TCONS_00058128-exon-scaffold_307-1491911889:133764..133829 | Clytia hemisphaerica | exon |
| TCONS_00058128-exon-scaffold_307-1510915933:133764..133829 | TCONS_00058128-exon-scaffold_307-1510915933:133764..133829 | Clytia hemisphaerica | exon |
| TCONS_00058128-exon-scaffold_307-1575043694:133764..133829 | TCONS_00058128-exon-scaffold_307-1575043694:133764..133829 | Clytia hemisphaerica | exon |
| TCONS_00058128-exon-scaffold_307-1491911889:134428..134441 | TCONS_00058128-exon-scaffold_307-1491911889:134428..134441 | Clytia hemisphaerica | exon |
| TCONS_00058128-exon-scaffold_307-1510915933:134428..134441 | TCONS_00058128-exon-scaffold_307-1510915933:134428..134441 | Clytia hemisphaerica | exon |
| TCONS_00058128-exon-scaffold_307-1575043694:134428..134441 | TCONS_00058128-exon-scaffold_307-1575043694:134428..134441 | Clytia hemisphaerica | exon |
| TCONS_00058128-exon-scaffold_307-1491911889:137809..138467 | TCONS_00058128-exon-scaffold_307-1491911889:137809..138467 | Clytia hemisphaerica | exon |
| TCONS_00058128-exon-scaffold_307-1510915933:137809..138467 | TCONS_00058128-exon-scaffold_307-1510915933:137809..138467 | Clytia hemisphaerica | exon |
| TCONS_00058128-exon-scaffold_307-1575043694:137809..138467 | TCONS_00058128-exon-scaffold_307-1575043694:137809..138467 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_307 | supercontig | scaffold_307:131289..138467 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004356 | glutamate-ammonia ligase activity |
| GO:0003824 | catalytic activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006807 | nitrogen compound metabolic process |
| GO:0006542 | glutamine biosynthetic process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006542 |
glutamine biosynthetic process |
| biological_process |
GO:0006807 |
nitrogen compound metabolic process |
| molecular_function |
GO:0003824 |
catalytic activity |
| molecular_function |
GO:0004356 |
glutamate-ammonia ligase activity |
Blast
BLAST of TCONS_00058128 vs. Swiss-Prot (Human)
Match: LGSN (Lengsin OS=Homo sapiens GN=LGSN PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.569e-46 Identity = 131/449 (29.18%), Postives = 214/449 (47.66%), Query Frame = 1
Query: 271 GSTGKYTEDVQEEEDYDFYRFIVSDFHGIARSKLVTKSAYKYMKKRGPGIAW-KTVLLSFDNYFNCEAKRLDGERCTDARLTPAEDLSVPRSLPWAGEGYKIAGVLCETWWGIDGLRQQACPRYMARRLCDQLESEFGLRIFHGTEMEFTLFKEKGVPEFDDGGL-------YIPQELDTVCKELLPLSKHCEAAGIPIETLQTEFGPGQLEVVLKPAYGIEGADNSFLFKCAAKEILAKPGFHGRATFMSKPIIDKVGSSNHFNHSLWKVKDNGELEDSMWDGTQESKLTKTAQHWLAGILKHTPALAAIFNPTVNDWRRLHITASTRDITTPHYITWGIENRLTLIRVIARGAGKATYLENRLPGATMNPYLALAGMVAAGIDGIRNKIELPAPGNTENEF-----GVLPGTLEEALDALKSSSVMREHLGDEFVNWFVCAKEKEIE 1578
S K+ + F RF +D HG++RSK + A+ + +K G+ + L N + E + C ++ + +LS R LPWA + A V+C+T+ + G PRY+A+R L++ G + +F +F GVPE + + ++ +EL+ H G +E+ + PGQ+E+ P +GI ADN+F + KE+ K + + F+ D S +HSLW V + S GT++ LT T + WLAG+LKH+ AL+ + P+V+ +R + +D+ TWG + + + G K T +EN+L AT NPYL LA VAAG+DG+ + E+ A + +F +P LE+AL AL+ +R+ LG+ F+ +FV K+ E+E
Sbjct: 70 SSRMKHIRQAMAKNRLQFVRFEATDLHGVSRSKTI--PAHFFQEKVSHGVCMPRGYLEVIPNPKDNEMNNIRAT-CFNSDIVLMPELSTFRVLPWAD---RTARVICDTF-TVTGEPLLTSPRYIAKRQLSHLQAS-GFSLLSAFIYDFCIF---GVPEILNSKIISFPALTFLNNHDQPFMQELVDGLYH---TGANVESFSSSTRPGQMEISFLPEFGISSADNAFTLRTGVKEVARKYNYIA-SFFIETGFCD----SGILSHSLWDVDRKKNMFCST-SGTEQ--LTITGKKWLAGLLKHSAALSCLMAPSVSCRKRY--SKDRKDLKKSVPTTWGYNDNSCIFNIKCHGE-KGTRIENKLGSATANPYLVLAATVAAGLDGLHSSNEVLAGPDESTDFYQVEPSEIPLKLEDALVALEEDQCLRQALGETFIRYFVAMKKYELE 493
The following BLAST results are available for this feature:
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