TCONS_00058551 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058551
Unique NameTCONS_00058551
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3595

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058551 ID=TCONS_00058551|Name=TCONS_00058551|organism=Clytia hemisphaerica|type=transcript|length=3595bp
tcagaGTAGAAAATctcaagaataaaaaaaaaatcataaatatttaaaaa
ttcaagAGAAGGAAACAGAAATCCAACAAAAGTAACAATGTCGTTAATAA
CATAATATGGCGACCGGCTTCCTTTACGGCTCACACGGTAACAATACTCG
AGgaaaatctaaaaagaaaacGTTAAAGGACTACAATCTTTACTTGAAAG
AGACCAGCAGCCAATCAGAAGATAATGTTGAAACAGAGAGTTTAATCAGT
TTACGAGAGGAGACCTCTGATCTCAGTTTTAGTGGTCACAATAAATTTGA
AGATTCTCATGTCGATGGTTATTTTCGACCACAGTTGAGATTAAAATCGC
CCACTAGACAATATCCTTCAATTGTGGGAGACGAGGAGAGAGAGAACGAT
GAAATGAGAGAGAGGAGAAGAGACATCGAGGATGATCATAATGTTATTGA
CGGGGAAGATTCTCAGACGCAGATGTTTTCTTCTACTGATTCGACAACAA
AGATCATcatcaaagaaacaaaaagaagaggGATAAAAGAAGAACAAAAG
GAAAGTGTAGATGGGGGATTattattgaaaaagaagaagaatagaAATGA
AGAATCAGAATCAGAAGAAAAAGATGCTGatgagaaagaaagaaacgaag
ATGTGTTATTTTTCTCTTCTTggtctccttcttcttcttcttgttcaACT
TCAAAAACGACATTCACTACTAATAAACACAAAGAAGCAAAACGAACAGT
AAGGAATAATACAAACAAACGTTACCGAACAATAACAAAGAATCAGAAAA
AGAAGAGTGAGCTTCTgttaaaaaataatcatcaaactgaagaagaagaa
gaaaaaaaagacgtTCTCCTTCAACAACGACGACAAcgaaaaggagaaaa
agaagaaacaggaGACTATTTAATTCAAACTAATAATATCAGTAATGGTA
AAAATAGTTTACAATCTTCTAGTAATCGTAAAAACATATCATCGACTGTT
TTGACTCGTCATCATCAAAAACCACAACAAACTTCTTCAAAGTTAAACAA
CAGTCGTTCTCACCAAAAAGAATATTCTATATTTTCATTGAGTAGTCATA
ATAACAAACGAAAACGTAAAAGTTTTGGTGGATTTCGAAGGAAAAGTATG
GAGGAAGGAGCAGCTACATCATCtaacgaagaagaaaatacaATCATGTC
TCCTCAACAACAGACAATACGTGCTGACCAATTCAACAAAATATGCCCAT
CACCTTTTGATGACGTACCCGGCTTCCGTCGCTCGAACACGATGCAACAC
CGAAAATCTAAAAGAGATAGTCTGAACTCTAATTCAACAGCAGCTGTAGG
TAGAATGTCAAAatcttttagttttgatttatcCTCGTCGTCGAAAGTGC
CAGGACCGGTGGCTTTAGGTCGTGATAAATGGATCCAGTTTGAGGAGGAT
CGAggtgaagaaaatatttttcaagaggAAGAGCATCAAATAAGTCCGGT
ATCTATCCAATCACCACAGAAAATAGACTTTGAATTTTTCCCAGAATTGA
CTAGCGAAACTGATCAAATGATTTTAGATTCTCATGTCGCCGAGAAAGAT
GTTGATTCTGAAAACGAAGTGGATAAACTTAAAGAACAATCTACGGGAAT
CGCTACCAGAAGTGTTGAAAACCTTTTAGAAACAGTCAACAAAACTGTGA
CTTTACTCAAAGGTTCTATAACTAATCGAGAAATATCTGACCCTGACGAA
CGTAAAGAGTTTGTTAACACTGATACTCCAGACGATTTGTCATCAATGAT
ATCTGACGAAATTATCAGTCTTGAATTTGACACCGACGAGGAGAAATTTC
GTGATACCCCCGTCAAGCAATTCCCAGACGTTTCTTTATTTCAAGTGTCA
GTTGTTGGTACGAATCGAGATAACTTGAGAATCGAACGCAAAAATAGTGT
TGATCACGTGACAAAGGATAACGGTAgtaatgatgttttggatgaaTATC
CTCCAACCACTCAACGTAATAGTTGGAAATTATGGTACCGTTATCCGgat
aagaaaatgaagatgggACGACGTCGTAAATGGACACCCGTCATTGCTCA
CGttgagaataattttctcaaattgaatAGTCTGAACGGTTGTACGCCGG
AAATTAAGCGAGAGTATCCCTTACATCCATTCTGCAGTTTCACGGCGCCT
ACAATGCATAAAGGAAATAAAGACGGAAAAGTACACTCTGTTAAATTACA
ATACGTCAAATATAAAGAAATAAGGCGTGTAAAACCAAGACTGGGTGTTG
AGCACGTCCCTGTTTTTACACCGGTTGTTAAACTATCGTGCCGTGACGTG
ATCGCGTTACGTGATTTCATGAAACGTATTGAAACTGTGATCCGGCAGAT
ACCAACGTACCGTGATGAAGACATTTCTTACGAACGTGAGGAAATCTTTA
TAGATAGCGAAGACGATTGTTCATACTTAGTGTCTGGGAGTGACGGTGTT
gttataaaatataatataacCGTTCAACTGAAACTTAGATGTTTTATATC
TGGAAATCCAGAGTTGAAGTTGTTCCTAAATGACGTCAACAACCAAGATA
TTTTATCGCGAACTAAGGAGGCATTGTCGAAAGAGAATAAACGAaccaat
aattggattgtaccagaaaattacgaatttaacCCTTGTATTGATGTGAA
AAAATCGCAGGACGAAGGAGGCGTGGTTTTCACTCCACCTGATGGATGCA
GTTTTGAGCTTTTACGTTTTCGGTTAAGGAAGCGAAACCCCCTTCCTATT
ACCGTTAAATCCAGTCTGGAAGTGTTAGCTTTAAAGTCGGTCCATTTGAA
GGCAGAGGTTCGAGTTAACGGCGACGGTAAAAGTATCCGGCATAAACGGA
ATAATGTTATTTTGTATATACCAGTACCATCATCTTGGAGtaaactgttc
ttaaaatcaAGACTTGTGGGTCGAATTGCCAAATATTTGAGTGTAAAATC
ATCTTTAAAATCTCAACGTGTGTCTAGAGCTTCTAACGCACGTGCTTCTT
TCGAGATAAGTACAGGGTGTGCAAGGTACGAACCAGCTTACGGTGCTATT
ATATGGGAGTTGGGTAACTTGCCGATTATACGTGATGGTCTACCGGCAGA
CGCGACTCATACTTTTCAATGTACTATCGAACTTCCTTTCCCGCTACATA
TAAGAGATGATTTTCAACCGTATTCTTATTTAGAATTTAACATCAAACAA
CAGATGGGATCGAACGTTTCAGTTGAAGAGGTTTTACTTTCTGATGGGCG
TGTCCCTGAAAAATGGGTGTGTTATCGTTCGAATTTCACGTACAGAATTG
AAATGCTTATTTTGGAGGATGGAAAAGAAAGGACGTAATTTTAAAATGTT
GGTTGGACTAAATCTCTTTGTTTGCTTTCTTTTCGGTACTAAACCGACgg
ttaagttttgttttgagaattctCTTTCTTAAAACAgctggaaattttca
tttcttcaatgggttattttttcgttaGCATACACATAACAAATTCccaa
ttttttgactattttcagCCAGAGTTTCAACTTATTGAAAAACCC
Run BLAST on NCBI

protein sequence of TCONS_00058551-protein

>TCONS_00058551-protein ID=TCONS_00058551-protein|Name=TCONS_00058551-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1093bp
MATGFLYGSHGNNTRGKSKKKTLKDYNLYLKETSSQSEDNVETESLISLR
EETSDLSFSGHNKFEDSHVDGYFRPQLRLKSPTRQYPSIVGDEERENDEM
RERRRDIEDDHNVIDGEDSQTQMFSSTDSTTKIIIKETKRRGIKEEQKES
VDGGLLLKKKKNRNEESESEEKDADEKERNEDVLFFSSWSPSSSSCSTSK
TTFTTNKHKEAKRTVRNNTNKRYRTITKNQKKKSELLLKNNHQTEEEEEK
KDVLLQQRRQRKGEKEETGDYLIQTNNISNGKNSLQSSSNRKNISSTVLT
RHHQKPQQTSSKLNNSRSHQKEYSIFSLSSHNNKRKRKSFGGFRRKSMEE
GAATSSNEEENTIMSPQQQTIRADQFNKICPSPFDDVPGFRRSNTMQHRK
SKRDSLNSNSTAAVGRMSKSFSFDLSSSSKVPGPVALGRDKWIQFEEDRG
EENIFQEEEHQISPVSIQSPQKIDFEFFPELTSETDQMILDSHVAEKDVD
SENEVDKLKEQSTGIATRSVENLLETVNKTVTLLKGSITNREISDPDERK
EFVNTDTPDDLSSMISDEIISLEFDTDEEKFRDTPVKQFPDVSLFQVSVV
GTNRDNLRIERKNSVDHVTKDNGSNDVLDEYPPTTQRNSWKLWYRYPDKK
MKMGRRRKWTPVIAHVENNFLKLNSLNGCTPEIKREYPLHPFCSFTAPTM
HKGNKDGKVHSVKLQYVKYKEIRRVKPRLGVEHVPVFTPVVKLSCRDVIA
LRDFMKRIETVIRQIPTYRDEDISYEREEIFIDSEDDCSYLVSGSDGVVI
KYNITVQLKLRCFISGNPELKLFLNDVNNQDILSRTKEALSKENKRTNNW
IVPENYEFNPCIDVKKSQDEGGVVFTPPDGCSFELLRFRLRKRNPLPITV
KSSLEVLALKSVHLKAEVRVNGDGKSIRHKRNNVILYIPVPSSWSKLFLK
SRLVGRIAKYLSVKSSLKSQRVSRASNARASFEISTGCARYEPAYGAIIW
ELGNLPIIRDGLPADATHTFQCTIELPFPLHIRDDFQPYSYLEFNIKQQM
GSNVSVEEVLLSDGRVPEKWVCYRSNFTYRIEMLILEDGKERT
Run BLAST on NCBI

transcript from alignment at scaffold_311:875222..878965-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058551 ID=TCONS_00058551|Name=TCONS_00058551|organism=Clytia hemisphaerica|type=transcript|length=3744bp|location=Sequence derived from alignment at scaffold_311:875222..878965- (Clytia hemisphaerica)
TCAGAGTAGAAAATCTCAAGAATAAAAAAAAAATCATAAATATTTAAAAA TTCAAGAGAAGGAAACAGAAATCCAACAAAAGTAACAATGTCGTTAATAA CATAATATGGCGACCGGCTTCCTTTACGGCTCACACGGTAACAATACTCG AGGAAAATCTAAAAAGAAAACGTTAAAGGACTACAATCTTTACTTGAAAG AGACCAGCAGCCAATCAGAAGATAATGTTGAAACAGAGAGTTTAATCAGT TTACGAGAGGAGACCTCTGATCTCAGTTTTAGTGGTCACAATAAATTTGA AGATTCTCATGTCGATGGTTATTTTCGACCACAGTTGAGATTAAAATCGC CCACTAGACAATATCCTTCAATTGTGGGAGACGAGGAGAGAGAGAACGGT AAGTGTGAAAAAATTGTTGAAGCAGATGGCTTTTCGACGTCGAGTTATTC CATTGGGGGAGAAAAAGTAGTACTAAAGTATGTTAATAAAAAAAAGCAAC TCAATTAACCAACTATCAAACCAGTAGTCTTTATCATTTTGTTTCAGATG AAATGAGAGAGAGGAGAAGAGACATCGAGGATGATCATAATGTTATTGAC GGGGAAGATTCTCAGACGCAGATGTTTTCTTCTACTGATTCGACAACAAA GATCATCATCAAAGAAACAAAAAGAAGAGGGATAAAAGAAGAACAAAAGG AAAGTGTAGATGGGGGATTATTATTGAAAAAGAAGAAGAATAGAAATGAA GAATCAGAATCAGAAGAAAAAGATGCTGATGAGAAAGAAAGAAACGAAGA TGTGTTATTTTTCTCTTCTTGGTCTCCTTCTTCTTCTTCTTGTTCAACTT CAAAAACGACATTCACTACTAATAAACACAAAGAAGCAAAACGAACAGTA AGGAATAATACAAACAAACGTTACCGAACAATAACAAAGAATCAGAAAAA GAAGAGTGAGCTTCTGTTAAAAAATAATCATCAAACTGAAGAAGAAGAAG AAAAAAAAGACGTTCTCCTTCAACAACGACGACAACGAAAAGGAGAAAAA GAAGAAACAGGAGACTATTTAATTCAAACTAATAATATCAGTAATGGTAA AAATAGTTTACAATCTTCTAGTAATCGTAAAAACATATCATCGACTGTTT TGACTCGTCATCATCAAAAACCACAACAAACTTCTTCAAAGTTAAACAAC AGTCGTTCTCACCAAAAAGAATATTCTATATTTTCATTGAGTAGTCATAA TAACAAACGAAAACGTAAAAGTTTTGGTGGATTTCGAAGGAAAAGTATGG AGGAAGGAGCAGCTACATCATCTAACGAAGAAGAAAATACAATCATGTCT CCTCAACAACAGACAATACGTGCTGACCAATTCAACAAAATATGCCCATC ACCTTTTGATGACGTACCCGGCTTCCGTCGCTCGAACACGATGCAACACC GAAAATCTAAAAGAGATAGTCTGAACTCTAATTCAACAGCAGCTGTAGGT AGAATGTCAAAATCTTTTAGTTTTGATTTATCCTCGTCGTCGAAAGTGCC AGGACCGGTGGCTTTAGGTCGTGATAAATGGATCCAGTTTGAGGAGGATC GAGGTGAAGAAAATATTTTTCAAGAGGAAGAGCATCAAATAAGTCCGGTA TCTATCCAATCACCACAGAAAATAGACTTTGAATTTTTCCCAGAATTGAC TAGCGAAACTGATCAAATGATTTTAGATTCTCATGTCGCCGAGAAAGATG TTGATTCTGAAAACGAAGTGGATAAACTTAAAGAACAATCTACGGGAATC GCTACCAGAAGTGTTGAAAACCTTTTAGAAACAGTCAACAAAACTGTGAC TTTACTCAAAGGTTCTATAACTAATCGAGAAATATCTGACCCTGACGAAC GTAAAGAGTTTGTTAACACTGATACTCCAGACGATTTGTCATCAATGATA TCTGACGAAATTATCAGTCTTGAATTTGACACCGACGAGGAGAAATTTCG TGATACCCCCGTCAAGCAATTCCCAGACGTTTCTTTATTTCAAGTGTCAG TTGTTGGTACGAATCGAGATAACTTGAGAATCGAACGCAAAAATAGTGTT GATCACGTGACAAAGGATAACGGTAGTAATGATGTTTTGGATGAATATCC TCCAACCACTCAACGTAATAGTTGGAAATTATGGTACCGTTATCCGGATA AGAAAATGAAGATGGGACGACGTCGTAAATGGACACCCGTCATTGCTCAC GTTGAGAATAATTTTCTCAAATTGAATAGTCTGAACGGTTGTACGCCGGA AATTAAGCGAGAGTATCCCTTACATCCATTCTGCAGTTTCACGGCGCCTA CAATGCATAAAGGAAATAAAGACGGAAAAGTACACTCTGTTAAATTACAA TACGTCAAATATAAAGAAATAAGGCGTGTAAAACCAAGACTGGGTGTTGA GCACGTCCCTGTTTTTACACCGGTTGTTAAACTATCGTGCCGTGACGTGA TCGCGTTACGTGATTTCATGAAACGTATTGAAACTGTGATCCGGCAGATA CCAACGTACCGTGATGAAGACATTTCTTACGAACGTGAGGAAATCTTTAT AGATAGCGAAGACGATTGTTCATACTTAGTGTCTGGGAGTGACGGTGTTG TTATAAAATATAATATAACCGTTCAACTGAAACTTAGATGTTTTATATCT GGAAATCCAGAGTTGAAGTTGTTCCTAAATGACGTCAACAACCAAGATAT TTTATCGCGAACTAAGGAGGCATTGTCGAAAGAGAATAAACGAACCAATA ATTGGATTGTACCAGAAAATTACGAATTTAACCCTTGTATTGATGTGAAA AAATCGCAGGACGAAGGAGGCGTGGTTTTCACTCCACCTGATGGATGCAG TTTTGAGCTTTTACGTTTTCGGTTAAGGAAGCGAAACCCCCTTCCTATTA CCGTTAAATCCAGTCTGGAAGTGTTAGCTTTAAAGTCGGTCCATTTGAAG GCAGAGGTTCGAGTTAACGGCGACGGTAAAAGTATCCGGCATAAACGGAA TAATGTTATTTTGTATATACCAGTACCATCATCTTGGAGTAAACTGTTCT TAAAATCAAGACTTGTGGGTCGAATTGCCAAATATTTGAGTGTAAAATCA TCTTTAAAATCTCAACGTGTGTCTAGAGCTTCTAACGCACGTGCTTCTTT CGAGATAAGTACAGGGTGTGCAAGGTACGAACCAGCTTACGGTGCTATTA TATGGGAGTTGGGTAACTTGCCGATTATACGTGATGGTCTACCGGCAGAC GCGACTCATACTTTTCAATGTACTATCGAACTTCCTTTCCCGCTACATAT AAGAGATGATTTTCAACCGTATTCTTATTTAGAATTTAACATCAAACAAC AGATGGGATCGAACGTTTCAGTTGAAGAGGTTTTACTTTCTGATGGGCGT GTCCCTGAAAAATGGGTGTGTTATCGTTCGAATTTCACGTACAGAATTGA AATGCTTATTTTGGAGGATGGAAAAGAAAGGACGTAATTTTAAAATGTTG GTTGGACTAAATCTCTTTGTTTGCTTTCTTTTCGGTACTAAACCGACGGT TAAGTTTTGTTTTGAGAATTCTCTTTCTTAAAACAGCTGGAAATTTTCAT TTCTTCAATGGGTTATTTTTTCGTTAGCATACACATAACAAATTCCCAAT TTTTTGACTATTTTCAGCCAGAGTTTCAACTTATTGAAAAACCC

Coding sequence (CDS) from alignment at scaffold_311:875222..878965-

>TCONS_00058551 ID=TCONS_00058551|Name=TCONS_00058551|organism=Clytia hemisphaerica|type=CDS|length=6564bp|location=Sequence derived from alignment at scaffold_311:875222..878965- (Clytia hemisphaerica)
ATGAAATGAGAGAGAGGAGAAGAGACATCGAGGATGATCATAATGTTATT
GACGGGGAAGATTCTCAGACGCAGATGTTTTCTTCTACTGATTCGACAAC
AAAGATCATCATCAAAGAAACAAAAAGAAGAGGGATAAAAGAAGAACAAA
AGGAAAGTGTAGATGGGGGATTATTATTGAAAAAGAAGAAGAATAGAAAT
GAAGAATCAGAATCAGAAGAAAAAGATGCTGATGAGAAAGAAAGAAACGA
AGATGTGTTATTTTTCTCTTCTTGGTCTCCTTCTTCTTCTTCTTGTTCAA
CTTCAAAAACGACATTCACTACTAATAAACACAAAGAAGCAAAACGAACA
GTAAGGAATAATACAAACAAACGTTACCGAACAATAACAAAGAATCAGAA
AAAGAAGAGTGAGCTTCTGTTAAAAAATAATCATCAAACTGAAGAAGAAG
AAGAAAAAAAAGACGTTCTCCTTCAACAACGACGACAACGAAAAGGAGAA
AAAGAAGAAACAGGAGACTATTTAATTCAAACTAATAATATCAGTAATGG
TAAAAATAGTTTACAATCTTCTAGTAATCGTAAAAACATATCATCGACTG
TTTTGACTCGTCATCATCAAAAACCACAACAAACTTCTTCAAAGTTAAAC
AACAGTCGTTCTCACCAAAAAGAATATTCTATATTTTCATTGAGTAGTCA
TAATAACAAACGAAAACGTAAAAGTTTTGGTGGATTTCGAAGGAAAAGTA
TGGAGGAAGGAGCAGCTACATCATCTAACGAAGAAGAAAATACAATCATG
TCTCCTCAACAACAGACAATACGTGCTGACCAATTCAACAAAATATGCCC
ATCACCTTTTGATGACGTACCCGGCTTCCGTCGCTCGAACACGATGCAAC
ACCGAAAATCTAAAAGAGATAGTCTGAACTCTAATTCAACAGCAGCTGTA
GGTAGAATGTCAAAATCTTTTAGTTTTGATTTATCCTCGTCGTCGAAAGT
GCCAGGACCGGTGGCTTTAGGTCGTGATAAATGGATCCAGTTTGAGGAGG
ATCGAGGTGAAGAAAATATTTTTCAAGAGGAAGAGCATCAAATAAGTCCG
GTATCTATCCAATCACCACAGAAAATAGACTTTGAATTTTTCCCAGAATT
GACTAGCGAAACTGATCAAATGATTTTAGATTCTCATGTCGCCGAGAAAG
ATGTTGATTCTGAAAACGAAGTGGATAAACTTAAAGAACAATCTACGGGA
ATCGCTACCAGAAGTGTTGAAAACCTTTTAGAAACAGTCAACAAAACTGT
GACTTTACTCAAAGGTTCTATAACTAATCGAGAAATATCTGACCCTGACG
AACGTAAAGAGTTTGTTAACACTGATACTCCAGACGATTTGTCATCAATG
ATATCTGACGAAATTATCAGTCTTGAATTTGACACCGACGAGGAGAAATT
TCGTGATACCCCCGTCAAGCAATTCCCAGACGTTTCTTTATTTCAAGTGT
CAGTTGTTGGTACGAATCGAGATAACTTGAGAATCGAACGCAAAAATAGT
GTTGATCACGTGACAAAGGATAACGGTAGTAATGATGTTTTGGATGAATA
TCCTCCAACCACTCAACGTAATAGTTGGAAATTATGGTACCGTTATCCGG
ATAAGAAAATGAAGATGGGACGACGTCGTAAATGGACACCCGTCATTGCT
CACGTTGAGAATAATTTTCTCAAATTGAATAGTCTGAACGGTTGTACGCC
GGAAATTAAGCGAGAGTATCCCTTACATCCATTCTGCAGTTTCACGGCGC
CTACAATGCATAAAGGAAATAAAGACGGAAAAGTACACTCTGTTAAATTA
CAATACGTCAAATATAAAGAAATAAGGCGTGTAAAACCAAGACTGGGTGT
TGAGCACGTCCCTGTTTTTACACCGGTTGTTAAACTATCGTGCCGTGACG
TGATCGCGTTACGTGATTTCATGAAACGTATTGAAACTGTGATCCGGCAG
ATACCAACGTACCGTGATGAAGACATTTCTTACGAACGTGAGGAAATCTT
TATAGATAGCGAAGACGATTGTTCATACTTAGTGTCTGGGAGTGACGGTG
TTGTTATAAAATATAATATAACCGTTCAACTGAAACTTAGATGTTTTATA
TCTGGAAATCCAGAGTTGAAGTTGTTCCTAAATGACGTCAACAACCAAGA
TATTTTATCGCGAACTAAGGAGGCATTGTCGAAAGAGAATAAACGAACCA
ATAATTGGATTGTACCAGAAAATTACGAATTTAACCCTTGTATTGATGTG
AAAAAATCGCAGGACGAAGGAGGCGTGGTTTTCACTCCACCTGATGGATG
CAGTTTTGAGCTTTTACGTTTTCGGTTAAGGAAGCGAAACCCCCTTCCTA
TTACCGTTAAATCCAGTCTGGAAGTGTTAGCTTTAAAGTCGGTCCATTTG
AAGGCAGAGGTTCGAGTTAACGGCGACGGTAAAAGTATCCGGCATAAACG
GAATAATGTTATTTTGTATATACCAGTACCATCATCTTGGAGTAAACTGT
TCTTAAAATCAAGACTTGTGGGTCGAATTGCCAAATATTTGAGTGTAAAA
TCATCTTTAAAATCTCAACGTGTGTCTAGAGCTTCTAACGCACGTGCTTC
TTTCGAGATAAGTACAGGGTGTGCAAGGTACGAACCAGCTTACGGTGCTA
TTATATGGGAGTTGGGTAACTTGCCGATTATACGTGATGGTCTACCGGCA
GACGCGACTCATACTTTTCAATGTACTATCGAACTTCCTTTCCCGCTACA
TATAAGAGATGATTTTCAACCGTATTCTTATTTAGAATTTAACATCAAAC
AACAGATGGGATCGAACGTTTCAGTTGAAGAGGTTTTACTTTCTGATGGG
CGTGTCCCTGAAAAATGGGTGTGTTATCGTTCGAATTTCACGTACAGAAT
TGAAATGCTTATTTTGGAGGATGGAAAAGAAAGGACGTAAATGGCGACCG
GCTTCCTTTACGGCTCACACGGTAACAATACTCGAGGAAAATCTAAAAAG
AAAACGTTAAAGGACTACAATCTTTACTTGAAAGAGACCAGCAGCCAATC
AGAAGATAATGTTGAAACAGAGAGTTTAATCAGTTTACGAGAGGAGACCT
CTGATCTCAGTTTTAGTGGTCACAATAAATTTGAAGATTCTCATGTCGAT
GGTTATTTTCGACCACAGTTGAGATTAAAATCGCCCACTAGACAATATCC
TTCAATTGTGGGAGACGAGGAGAGAGAGAACGATGAAATGAGAGAGAGGA
GAAGAGACATCGAGGATGATCATAATGTTATTGACGGGGAAGATTCTCAG
ACGCAGATGTTTTCTTCTACTGATTCGACAACAAAGATCATCATCAAAGA
AACAAAAAGAAGAGGGATAAAAGAAGAACAAAAGGAAAGTGTAGATGGGG
GATTATTATTGAAAAAGAAGAAGAATAGAAATGAAGAATCAGAATCAGAA
GAAAAAGATGCTGATGAGAAAGAAAGAAACGAAGATGTGTTATTTTTCTC
TTCTTGGTCTCCTTCTTCTTCTTCTTGTTCAACTTCAAAAACGACATTCA
CTACTAATAAACACAAAGAAGCAAAACGAACAGTAAGGAATAATACAAAC
AAACGTTACCGAACAATAACAAAGAATCAGAAAAAGAAGAGTGAGCTTCT
GTTAAAAAATAATCATCAAACTGAAGAAGAAGAAGAAAAAAAAGACGTTC
TCCTTCAACAACGACGACAACGAAAAGGAGAAAAAGAAGAAACAGGAGAC
TATTTAATTCAAACTAATAATATCAGTAATGGTAAAAATAGTTTACAATC
TTCTAGTAATCGTAAAAACATATCATCGACTGTTTTGACTCGTCATCATC
AAAAACCACAACAAACTTCTTCAAAGTTAAACAACAGTCGTTCTCACCAA
AAAGAATATTCTATATTTTCATTGAGTAGTCATAATAACAAACGAAAACG
TAAAAGTTTTGGTGGATTTCGAAGGAAAAGTATGGAGGAAGGAGCAGCTA
CATCATCTAACGAAGAAGAAAATACAATCATGTCTCCTCAACAACAGACA
ATACGTGCTGACCAATTCAACAAAATATGCCCATCACCTTTTGATGACGT
ACCCGGCTTCCGTCGCTCGAACACGATGCAACACCGAAAATCTAAAAGAG
ATAGTCTGAACTCTAATTCAACAGCAGCTGTAGGTAGAATGTCAAAATCT
TTTAGTTTTGATTTATCCTCGTCGTCGAAAGTGCCAGGACCGGTGGCTTT
AGGTCGTGATAAATGGATCCAGTTTGAGGAGGATCGAGGTGAAGAAAATA
TTTTTCAAGAGGAAGAGCATCAAATAAGTCCGGTATCTATCCAATCACCA
CAGAAAATAGACTTTGAATTTTTCCCAGAATTGACTAGCGAAACTGATCA
AATGATTTTAGATTCTCATGTCGCCGAGAAAGATGTTGATTCTGAAAACG
AAGTGGATAAACTTAAAGAACAATCTACGGGAATCGCTACCAGAAGTGTT
GAAAACCTTTTAGAAACAGTCAACAAAACTGTGACTTTACTCAAAGGTTC
TATAACTAATCGAGAAATATCTGACCCTGACGAACGTAAAGAGTTTGTTA
ACACTGATACTCCAGACGATTTGTCATCAATGATATCTGACGAAATTATC
AGTCTTGAATTTGACACCGACGAGGAGAAATTTCGTGATACCCCCGTCAA
GCAATTCCCAGACGTTTCTTTATTTCAAGTGTCAGTTGTTGGTACGAATC
GAGATAACTTGAGAATCGAACGCAAAAATAGTGTTGATCACGTGACAAAG
GATAACGGTAGTAATGATGTTTTGGATGAATATCCTCCAACCACTCAACG
TAATAGTTGGAAATTATGGTACCGTTATCCGGATAAGAAAATGAAGATGG
GACGACGTCGTAAATGGACACCCGTCATTGCTCACGTTGAGAATAATTTT
CTCAAATTGAATAGTCTGAACGGTTGTACGCCGGAAATTAAGCGAGAGTA
TCCCTTACATCCATTCTGCAGTTTCACGGCGCCTACAATGCATAAAGGAA
ATAAAGACGGAAAAGTACACTCTGTTAAATTACAATACGTCAAATATAAA
GAAATAAGGCGTGTAAAACCAAGACTGGGTGTTGAGCACGTCCCTGTTTT
TACACCGGTTGTTAAACTATCGTGCCGTGACGTGATCGCGTTACGTGATT
TCATGAAACGTATTGAAACTGTGATCCGGCAGATACCAACGTACCGTGAT
GAAGACATTTCTTACGAACGTGAGGAAATCTTTATAGATAGCGAAGACGA
TTGTTCATACTTAGTGTCTGGGAGTGACGGTGTTGTTATAAAATATAATA
TAACCGTTCAACTGAAACTTAGATGTTTTATATCTGGAAATCCAGAGTTG
AAGTTGTTCCTAAATGACGTCAACAACCAAGATATTTTATCGCGAACTAA
GGAGGCATTGTCGAAAGAGAATAAACGAACCAATAATTGGATTGTACCAG
AAAATTACGAATTTAACCCTTGTATTGATGTGAAAAAATCGCAGGACGAA
GGAGGCGTGGTTTTCACTCCACCTGATGGATGCAGTTTTGAGCTTTTACG
TTTTCGGTTAAGGAAGCGAAACCCCCTTCCTATTACCGTTAAATCCAGTC
TGGAAGTGTTAGCTTTAAAGTCGGTCCATTTGAAGGCAGAGGTTCGAGTT
AACGGCGACGGTAAAAGTATCCGGCATAAACGGAATAATGTTATTTTGTA
TATACCAGTACCATCATCTTGGAGTAAACTGTTCTTAAAATCAAGACTTG
TGGGTCGAATTGCCAAATATTTGAGTGTAAAATCATCTTTAAAATCTCAA
CGTGTGTCTAGAGCTTCTAACGCACGTGCTTCTTTCGAGATAAGTACAGG
GTGTGCAAGGTACGAACCAGCTTACGGTGCTATTATATGGGAGTTGGGTA
ACTTGCCGATTATACGTGATGGTCTACCGGCAGACGCGACTCATACTTTT
CAATGTACTATCGAACTTCCTTTCCCGCTACATATAAGAGATGATTTTCA
ACCGTATTCTTATTTAGAATTTAACATCAAACAACAGATGGGATCGAACG
TTTCAGTTGAAGAGGTTTTACTTTCTGATGGGCGTGTCCCTGAAAAATGG
GTGTGTTATCGTTCGAATTTCACGTACAGAATTGAAATGCTTATTTTGGA
GGATGGAAAAGAAAGGACGTAAATGGCGACCGGCTTCCTTTACGGCTCAC
ACGGTAACAATACTCGAGGAAAATCTAAAAAGAAAACGTTAAAGGACTAC
AATCTTTACTTGAAAGAGACCAGCAGCCAATCAGAAGATAATGTTGAAAC
AGAGAGTTTAATCAGTTTACGAGAGGAGACCTCTGATCTCAGTTTTAGTG
GTCACAATAAATTTGAAGATTCTCATGTCGATGGTTATTTTCGACCACAG
TTGAGATTAAAATCGCCCACTAGACAATATCCTTCAATTGTGGGAGACGA
GGAGAGAGAGAACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036881XLOC_036881Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058551-proteinTCONS_00058551-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058551-exon-scaffold_311-1575043694:878568..878965TCONS_00058551-exon-scaffold_311-1575043694:878568..878965Clytia hemisphaericaexon
TCONS_00058551-exon-scaffold_311-1575043694:875222..878418TCONS_00058551-exon-scaffold_311-1575043694:875222..878418Clytia hemisphaericaexon
TCONS_00058551-exon-scaffold_311-1510915933:878568..878965TCONS_00058551-exon-scaffold_311-1510915933:878568..878965Clytia hemisphaericaexon
TCONS_00058551-exon-scaffold_311-1510915933:875222..878418TCONS_00058551-exon-scaffold_311-1510915933:875222..878418Clytia hemisphaericaexon
TCONS_00058551-exon-scaffold_311-1491911889:878568..878965TCONS_00058551-exon-scaffold_311-1491911889:878568..878965Clytia hemisphaericaexon
TCONS_00058551-exon-scaffold_311-1491911889:875222..878418TCONS_00058551-exon-scaffold_311-1491911889:875222..878418Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:875222..878965 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (0.649967 tpm) - - (11.8396 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.84534 3.40242 1.29312 0.649967 8.78878 6.58771 10.9653 11.06 4.46769 5.38084 6.70893 4.90563 6.25069 6.26706 5.21782 5.75914 8.21171 8.32806 7.64074 8.99783 8.17532 8.44963 11.1366 11.8396 10.8783 10.5218 4.38197 3.18926 7.48941 7.52388
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001392Clathrin_mu
IPR028565MHD
IPR012320SHD_dom
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
GO:0006886intracellular protein transport
GO:0006897endocytosis
Vocabulary: Cellular Component
TermDefinition
GO:0030131clathrin adaptor complex
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006897 endocytosis
biological_process GO:0006886 intracellular protein transport
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0030131 clathrin adaptor complex
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058551 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
500100015002000250030003500Expect = 1.59e-42 / Id = 25.73SequenceSTON2
Match NameE-valueIdentityDescription
STON21.593e-4225.73Stonin-2 OS=Homo sapiens GN=STON2 PE=1 SV=1[more]
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