Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058551 ID=TCONS_00058551|Name=TCONS_00058551|organism=Clytia hemisphaerica|type=transcript|length=3595bp tcagaGTAGAAAATctcaagaataaaaaaaaaatcataaatatttaaaaa ttcaagAGAAGGAAACAGAAATCCAACAAAAGTAACAATGTCGTTAATAA CATAATATGGCGACCGGCTTCCTTTACGGCTCACACGGTAACAATACTCG AGgaaaatctaaaaagaaaacGTTAAAGGACTACAATCTTTACTTGAAAG AGACCAGCAGCCAATCAGAAGATAATGTTGAAACAGAGAGTTTAATCAGT TTACGAGAGGAGACCTCTGATCTCAGTTTTAGTGGTCACAATAAATTTGA AGATTCTCATGTCGATGGTTATTTTCGACCACAGTTGAGATTAAAATCGC CCACTAGACAATATCCTTCAATTGTGGGAGACGAGGAGAGAGAGAACGAT GAAATGAGAGAGAGGAGAAGAGACATCGAGGATGATCATAATGTTATTGA CGGGGAAGATTCTCAGACGCAGATGTTTTCTTCTACTGATTCGACAACAA AGATCATcatcaaagaaacaaaaagaagaggGATAAAAGAAGAACAAAAG GAAAGTGTAGATGGGGGATTattattgaaaaagaagaagaatagaAATGA AGAATCAGAATCAGAAGAAAAAGATGCTGatgagaaagaaagaaacgaag ATGTGTTATTTTTCTCTTCTTggtctccttcttcttcttcttgttcaACT TCAAAAACGACATTCACTACTAATAAACACAAAGAAGCAAAACGAACAGT AAGGAATAATACAAACAAACGTTACCGAACAATAACAAAGAATCAGAAAA AGAAGAGTGAGCTTCTgttaaaaaataatcatcaaactgaagaagaagaa gaaaaaaaagacgtTCTCCTTCAACAACGACGACAAcgaaaaggagaaaa agaagaaacaggaGACTATTTAATTCAAACTAATAATATCAGTAATGGTA AAAATAGTTTACAATCTTCTAGTAATCGTAAAAACATATCATCGACTGTT TTGACTCGTCATCATCAAAAACCACAACAAACTTCTTCAAAGTTAAACAA CAGTCGTTCTCACCAAAAAGAATATTCTATATTTTCATTGAGTAGTCATA ATAACAAACGAAAACGTAAAAGTTTTGGTGGATTTCGAAGGAAAAGTATG GAGGAAGGAGCAGCTACATCATCtaacgaagaagaaaatacaATCATGTC TCCTCAACAACAGACAATACGTGCTGACCAATTCAACAAAATATGCCCAT CACCTTTTGATGACGTACCCGGCTTCCGTCGCTCGAACACGATGCAACAC CGAAAATCTAAAAGAGATAGTCTGAACTCTAATTCAACAGCAGCTGTAGG TAGAATGTCAAAatcttttagttttgatttatcCTCGTCGTCGAAAGTGC CAGGACCGGTGGCTTTAGGTCGTGATAAATGGATCCAGTTTGAGGAGGAT CGAggtgaagaaaatatttttcaagaggAAGAGCATCAAATAAGTCCGGT ATCTATCCAATCACCACAGAAAATAGACTTTGAATTTTTCCCAGAATTGA CTAGCGAAACTGATCAAATGATTTTAGATTCTCATGTCGCCGAGAAAGAT GTTGATTCTGAAAACGAAGTGGATAAACTTAAAGAACAATCTACGGGAAT CGCTACCAGAAGTGTTGAAAACCTTTTAGAAACAGTCAACAAAACTGTGA CTTTACTCAAAGGTTCTATAACTAATCGAGAAATATCTGACCCTGACGAA CGTAAAGAGTTTGTTAACACTGATACTCCAGACGATTTGTCATCAATGAT ATCTGACGAAATTATCAGTCTTGAATTTGACACCGACGAGGAGAAATTTC GTGATACCCCCGTCAAGCAATTCCCAGACGTTTCTTTATTTCAAGTGTCA GTTGTTGGTACGAATCGAGATAACTTGAGAATCGAACGCAAAAATAGTGT TGATCACGTGACAAAGGATAACGGTAgtaatgatgttttggatgaaTATC CTCCAACCACTCAACGTAATAGTTGGAAATTATGGTACCGTTATCCGgat aagaaaatgaagatgggACGACGTCGTAAATGGACACCCGTCATTGCTCA CGttgagaataattttctcaaattgaatAGTCTGAACGGTTGTACGCCGG AAATTAAGCGAGAGTATCCCTTACATCCATTCTGCAGTTTCACGGCGCCT ACAATGCATAAAGGAAATAAAGACGGAAAAGTACACTCTGTTAAATTACA ATACGTCAAATATAAAGAAATAAGGCGTGTAAAACCAAGACTGGGTGTTG AGCACGTCCCTGTTTTTACACCGGTTGTTAAACTATCGTGCCGTGACGTG ATCGCGTTACGTGATTTCATGAAACGTATTGAAACTGTGATCCGGCAGAT ACCAACGTACCGTGATGAAGACATTTCTTACGAACGTGAGGAAATCTTTA TAGATAGCGAAGACGATTGTTCATACTTAGTGTCTGGGAGTGACGGTGTT gttataaaatataatataacCGTTCAACTGAAACTTAGATGTTTTATATC TGGAAATCCAGAGTTGAAGTTGTTCCTAAATGACGTCAACAACCAAGATA TTTTATCGCGAACTAAGGAGGCATTGTCGAAAGAGAATAAACGAaccaat aattggattgtaccagaaaattacgaatttaacCCTTGTATTGATGTGAA AAAATCGCAGGACGAAGGAGGCGTGGTTTTCACTCCACCTGATGGATGCA GTTTTGAGCTTTTACGTTTTCGGTTAAGGAAGCGAAACCCCCTTCCTATT ACCGTTAAATCCAGTCTGGAAGTGTTAGCTTTAAAGTCGGTCCATTTGAA GGCAGAGGTTCGAGTTAACGGCGACGGTAAAAGTATCCGGCATAAACGGA ATAATGTTATTTTGTATATACCAGTACCATCATCTTGGAGtaaactgttc ttaaaatcaAGACTTGTGGGTCGAATTGCCAAATATTTGAGTGTAAAATC ATCTTTAAAATCTCAACGTGTGTCTAGAGCTTCTAACGCACGTGCTTCTT TCGAGATAAGTACAGGGTGTGCAAGGTACGAACCAGCTTACGGTGCTATT ATATGGGAGTTGGGTAACTTGCCGATTATACGTGATGGTCTACCGGCAGA CGCGACTCATACTTTTCAATGTACTATCGAACTTCCTTTCCCGCTACATA TAAGAGATGATTTTCAACCGTATTCTTATTTAGAATTTAACATCAAACAA CAGATGGGATCGAACGTTTCAGTTGAAGAGGTTTTACTTTCTGATGGGCG TGTCCCTGAAAAATGGGTGTGTTATCGTTCGAATTTCACGTACAGAATTG AAATGCTTATTTTGGAGGATGGAAAAGAAAGGACGTAATTTTAAAATGTT GGTTGGACTAAATCTCTTTGTTTGCTTTCTTTTCGGTACTAAACCGACgg ttaagttttgttttgagaattctCTTTCTTAAAACAgctggaaattttca tttcttcaatgggttattttttcgttaGCATACACATAACAAATTCccaa ttttttgactattttcagCCAGAGTTTCAACTTATTGAAAAACCC Run BLAST on NCBI protein sequence of TCONS_00058551-protein >TCONS_00058551-protein ID=TCONS_00058551-protein|Name=TCONS_00058551-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1093bp
MATGFLYGSHGNNTRGKSKKKTLKDYNLYLKETSSQSEDNVETESLISLR EETSDLSFSGHNKFEDSHVDGYFRPQLRLKSPTRQYPSIVGDEERENDEM RERRRDIEDDHNVIDGEDSQTQMFSSTDSTTKIIIKETKRRGIKEEQKES VDGGLLLKKKKNRNEESESEEKDADEKERNEDVLFFSSWSPSSSSCSTSK TTFTTNKHKEAKRTVRNNTNKRYRTITKNQKKKSELLLKNNHQTEEEEEK KDVLLQQRRQRKGEKEETGDYLIQTNNISNGKNSLQSSSNRKNISSTVLT RHHQKPQQTSSKLNNSRSHQKEYSIFSLSSHNNKRKRKSFGGFRRKSMEE GAATSSNEEENTIMSPQQQTIRADQFNKICPSPFDDVPGFRRSNTMQHRK SKRDSLNSNSTAAVGRMSKSFSFDLSSSSKVPGPVALGRDKWIQFEEDRG EENIFQEEEHQISPVSIQSPQKIDFEFFPELTSETDQMILDSHVAEKDVD SENEVDKLKEQSTGIATRSVENLLETVNKTVTLLKGSITNREISDPDERK EFVNTDTPDDLSSMISDEIISLEFDTDEEKFRDTPVKQFPDVSLFQVSVV GTNRDNLRIERKNSVDHVTKDNGSNDVLDEYPPTTQRNSWKLWYRYPDKK MKMGRRRKWTPVIAHVENNFLKLNSLNGCTPEIKREYPLHPFCSFTAPTM HKGNKDGKVHSVKLQYVKYKEIRRVKPRLGVEHVPVFTPVVKLSCRDVIA LRDFMKRIETVIRQIPTYRDEDISYEREEIFIDSEDDCSYLVSGSDGVVI KYNITVQLKLRCFISGNPELKLFLNDVNNQDILSRTKEALSKENKRTNNW IVPENYEFNPCIDVKKSQDEGGVVFTPPDGCSFELLRFRLRKRNPLPITV KSSLEVLALKSVHLKAEVRVNGDGKSIRHKRNNVILYIPVPSSWSKLFLK SRLVGRIAKYLSVKSSLKSQRVSRASNARASFEISTGCARYEPAYGAIIW ELGNLPIIRDGLPADATHTFQCTIELPFPLHIRDDFQPYSYLEFNIKQQM GSNVSVEEVLLSDGRVPEKWVCYRSNFTYRIEMLILEDGKERT Run BLAST on NCBI transcript from alignment at scaffold_311:875222..878965- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058551 ID=TCONS_00058551|Name=TCONS_00058551|organism=Clytia hemisphaerica|type=transcript|length=3744bp|location=Sequence derived from alignment at scaffold_311:875222..878965- (Clytia hemisphaerica) TCAGAGTAGAAAATCTCAAGAATAAAAAAAAAATCATAAATATTTAAAAA
TTCAAGAGAAGGAAACAGAAATCCAACAAAAGTAACAATGTCGTTAATAA
CATAATATGGCGACCGGCTTCCTTTACGGCTCACACGGTAACAATACTCG
AGGAAAATCTAAAAAGAAAACGTTAAAGGACTACAATCTTTACTTGAAAG
AGACCAGCAGCCAATCAGAAGATAATGTTGAAACAGAGAGTTTAATCAGT
TTACGAGAGGAGACCTCTGATCTCAGTTTTAGTGGTCACAATAAATTTGA
AGATTCTCATGTCGATGGTTATTTTCGACCACAGTTGAGATTAAAATCGC
CCACTAGACAATATCCTTCAATTGTGGGAGACGAGGAGAGAGAGAACGGT
AAGTGTGAAAAAATTGTTGAAGCAGATGGCTTTTCGACGTCGAGTTATTC
CATTGGGGGAGAAAAAGTAGTACTAAAGTATGTTAATAAAAAAAAGCAAC
TCAATTAACCAACTATCAAACCAGTAGTCTTTATCATTTTGTTTCAGATG
AAATGAGAGAGAGGAGAAGAGACATCGAGGATGATCATAATGTTATTGAC
GGGGAAGATTCTCAGACGCAGATGTTTTCTTCTACTGATTCGACAACAAA
GATCATCATCAAAGAAACAAAAAGAAGAGGGATAAAAGAAGAACAAAAGG
AAAGTGTAGATGGGGGATTATTATTGAAAAAGAAGAAGAATAGAAATGAA
GAATCAGAATCAGAAGAAAAAGATGCTGATGAGAAAGAAAGAAACGAAGA
TGTGTTATTTTTCTCTTCTTGGTCTCCTTCTTCTTCTTCTTGTTCAACTT
CAAAAACGACATTCACTACTAATAAACACAAAGAAGCAAAACGAACAGTA
AGGAATAATACAAACAAACGTTACCGAACAATAACAAAGAATCAGAAAAA
GAAGAGTGAGCTTCTGTTAAAAAATAATCATCAAACTGAAGAAGAAGAAG
AAAAAAAAGACGTTCTCCTTCAACAACGACGACAACGAAAAGGAGAAAAA
GAAGAAACAGGAGACTATTTAATTCAAACTAATAATATCAGTAATGGTAA
AAATAGTTTACAATCTTCTAGTAATCGTAAAAACATATCATCGACTGTTT
TGACTCGTCATCATCAAAAACCACAACAAACTTCTTCAAAGTTAAACAAC
AGTCGTTCTCACCAAAAAGAATATTCTATATTTTCATTGAGTAGTCATAA
TAACAAACGAAAACGTAAAAGTTTTGGTGGATTTCGAAGGAAAAGTATGG
AGGAAGGAGCAGCTACATCATCTAACGAAGAAGAAAATACAATCATGTCT
CCTCAACAACAGACAATACGTGCTGACCAATTCAACAAAATATGCCCATC
ACCTTTTGATGACGTACCCGGCTTCCGTCGCTCGAACACGATGCAACACC
GAAAATCTAAAAGAGATAGTCTGAACTCTAATTCAACAGCAGCTGTAGGT
AGAATGTCAAAATCTTTTAGTTTTGATTTATCCTCGTCGTCGAAAGTGCC
AGGACCGGTGGCTTTAGGTCGTGATAAATGGATCCAGTTTGAGGAGGATC
GAGGTGAAGAAAATATTTTTCAAGAGGAAGAGCATCAAATAAGTCCGGTA
TCTATCCAATCACCACAGAAAATAGACTTTGAATTTTTCCCAGAATTGAC
TAGCGAAACTGATCAAATGATTTTAGATTCTCATGTCGCCGAGAAAGATG
TTGATTCTGAAAACGAAGTGGATAAACTTAAAGAACAATCTACGGGAATC
GCTACCAGAAGTGTTGAAAACCTTTTAGAAACAGTCAACAAAACTGTGAC
TTTACTCAAAGGTTCTATAACTAATCGAGAAATATCTGACCCTGACGAAC
GTAAAGAGTTTGTTAACACTGATACTCCAGACGATTTGTCATCAATGATA
TCTGACGAAATTATCAGTCTTGAATTTGACACCGACGAGGAGAAATTTCG
TGATACCCCCGTCAAGCAATTCCCAGACGTTTCTTTATTTCAAGTGTCAG
TTGTTGGTACGAATCGAGATAACTTGAGAATCGAACGCAAAAATAGTGTT
GATCACGTGACAAAGGATAACGGTAGTAATGATGTTTTGGATGAATATCC
TCCAACCACTCAACGTAATAGTTGGAAATTATGGTACCGTTATCCGGATA
AGAAAATGAAGATGGGACGACGTCGTAAATGGACACCCGTCATTGCTCAC
GTTGAGAATAATTTTCTCAAATTGAATAGTCTGAACGGTTGTACGCCGGA
AATTAAGCGAGAGTATCCCTTACATCCATTCTGCAGTTTCACGGCGCCTA
CAATGCATAAAGGAAATAAAGACGGAAAAGTACACTCTGTTAAATTACAA
TACGTCAAATATAAAGAAATAAGGCGTGTAAAACCAAGACTGGGTGTTGA
GCACGTCCCTGTTTTTACACCGGTTGTTAAACTATCGTGCCGTGACGTGA
TCGCGTTACGTGATTTCATGAAACGTATTGAAACTGTGATCCGGCAGATA
CCAACGTACCGTGATGAAGACATTTCTTACGAACGTGAGGAAATCTTTAT
AGATAGCGAAGACGATTGTTCATACTTAGTGTCTGGGAGTGACGGTGTTG
TTATAAAATATAATATAACCGTTCAACTGAAACTTAGATGTTTTATATCT
GGAAATCCAGAGTTGAAGTTGTTCCTAAATGACGTCAACAACCAAGATAT
TTTATCGCGAACTAAGGAGGCATTGTCGAAAGAGAATAAACGAACCAATA
ATTGGATTGTACCAGAAAATTACGAATTTAACCCTTGTATTGATGTGAAA
AAATCGCAGGACGAAGGAGGCGTGGTTTTCACTCCACCTGATGGATGCAG
TTTTGAGCTTTTACGTTTTCGGTTAAGGAAGCGAAACCCCCTTCCTATTA
CCGTTAAATCCAGTCTGGAAGTGTTAGCTTTAAAGTCGGTCCATTTGAAG
GCAGAGGTTCGAGTTAACGGCGACGGTAAAAGTATCCGGCATAAACGGAA
TAATGTTATTTTGTATATACCAGTACCATCATCTTGGAGTAAACTGTTCT
TAAAATCAAGACTTGTGGGTCGAATTGCCAAATATTTGAGTGTAAAATCA
TCTTTAAAATCTCAACGTGTGTCTAGAGCTTCTAACGCACGTGCTTCTTT
CGAGATAAGTACAGGGTGTGCAAGGTACGAACCAGCTTACGGTGCTATTA
TATGGGAGTTGGGTAACTTGCCGATTATACGTGATGGTCTACCGGCAGAC
GCGACTCATACTTTTCAATGTACTATCGAACTTCCTTTCCCGCTACATAT
AAGAGATGATTTTCAACCGTATTCTTATTTAGAATTTAACATCAAACAAC
AGATGGGATCGAACGTTTCAGTTGAAGAGGTTTTACTTTCTGATGGGCGT
GTCCCTGAAAAATGGGTGTGTTATCGTTCGAATTTCACGTACAGAATTGA
AATGCTTATTTTGGAGGATGGAAAAGAAAGGACGTAATTTTAAAATGTTG
GTTGGACTAAATCTCTTTGTTTGCTTTCTTTTCGGTACTAAACCGACGGT
TAAGTTTTGTTTTGAGAATTCTCTTTCTTAAAACAGCTGGAAATTTTCAT
TTCTTCAATGGGTTATTTTTTCGTTAGCATACACATAACAAATTCCCAAT
TTTTTGACTATTTTCAGCCAGAGTTTCAACTTATTGAAAAACCC Coding sequence (CDS) from alignment at scaffold_311:875222..878965- >TCONS_00058551 ID=TCONS_00058551|Name=TCONS_00058551|organism=Clytia hemisphaerica|type=CDS|length=6564bp|location=Sequence derived from alignment at scaffold_311:875222..878965- (Clytia hemisphaerica) ATGAAATGAGAGAGAGGAGAAGAGACATCGAGGATGATCATAATGTTATT GACGGGGAAGATTCTCAGACGCAGATGTTTTCTTCTACTGATTCGACAAC AAAGATCATCATCAAAGAAACAAAAAGAAGAGGGATAAAAGAAGAACAAA AGGAAAGTGTAGATGGGGGATTATTATTGAAAAAGAAGAAGAATAGAAAT GAAGAATCAGAATCAGAAGAAAAAGATGCTGATGAGAAAGAAAGAAACGA AGATGTGTTATTTTTCTCTTCTTGGTCTCCTTCTTCTTCTTCTTGTTCAA CTTCAAAAACGACATTCACTACTAATAAACACAAAGAAGCAAAACGAACA GTAAGGAATAATACAAACAAACGTTACCGAACAATAACAAAGAATCAGAA AAAGAAGAGTGAGCTTCTGTTAAAAAATAATCATCAAACTGAAGAAGAAG AAGAAAAAAAAGACGTTCTCCTTCAACAACGACGACAACGAAAAGGAGAA AAAGAAGAAACAGGAGACTATTTAATTCAAACTAATAATATCAGTAATGG TAAAAATAGTTTACAATCTTCTAGTAATCGTAAAAACATATCATCGACTG TTTTGACTCGTCATCATCAAAAACCACAACAAACTTCTTCAAAGTTAAAC AACAGTCGTTCTCACCAAAAAGAATATTCTATATTTTCATTGAGTAGTCA TAATAACAAACGAAAACGTAAAAGTTTTGGTGGATTTCGAAGGAAAAGTA TGGAGGAAGGAGCAGCTACATCATCTAACGAAGAAGAAAATACAATCATG TCTCCTCAACAACAGACAATACGTGCTGACCAATTCAACAAAATATGCCC ATCACCTTTTGATGACGTACCCGGCTTCCGTCGCTCGAACACGATGCAAC ACCGAAAATCTAAAAGAGATAGTCTGAACTCTAATTCAACAGCAGCTGTA GGTAGAATGTCAAAATCTTTTAGTTTTGATTTATCCTCGTCGTCGAAAGT GCCAGGACCGGTGGCTTTAGGTCGTGATAAATGGATCCAGTTTGAGGAGG ATCGAGGTGAAGAAAATATTTTTCAAGAGGAAGAGCATCAAATAAGTCCG GTATCTATCCAATCACCACAGAAAATAGACTTTGAATTTTTCCCAGAATT GACTAGCGAAACTGATCAAATGATTTTAGATTCTCATGTCGCCGAGAAAG ATGTTGATTCTGAAAACGAAGTGGATAAACTTAAAGAACAATCTACGGGA ATCGCTACCAGAAGTGTTGAAAACCTTTTAGAAACAGTCAACAAAACTGT GACTTTACTCAAAGGTTCTATAACTAATCGAGAAATATCTGACCCTGACG AACGTAAAGAGTTTGTTAACACTGATACTCCAGACGATTTGTCATCAATG ATATCTGACGAAATTATCAGTCTTGAATTTGACACCGACGAGGAGAAATT TCGTGATACCCCCGTCAAGCAATTCCCAGACGTTTCTTTATTTCAAGTGT CAGTTGTTGGTACGAATCGAGATAACTTGAGAATCGAACGCAAAAATAGT GTTGATCACGTGACAAAGGATAACGGTAGTAATGATGTTTTGGATGAATA TCCTCCAACCACTCAACGTAATAGTTGGAAATTATGGTACCGTTATCCGG ATAAGAAAATGAAGATGGGACGACGTCGTAAATGGACACCCGTCATTGCT CACGTTGAGAATAATTTTCTCAAATTGAATAGTCTGAACGGTTGTACGCC GGAAATTAAGCGAGAGTATCCCTTACATCCATTCTGCAGTTTCACGGCGC CTACAATGCATAAAGGAAATAAAGACGGAAAAGTACACTCTGTTAAATTA CAATACGTCAAATATAAAGAAATAAGGCGTGTAAAACCAAGACTGGGTGT TGAGCACGTCCCTGTTTTTACACCGGTTGTTAAACTATCGTGCCGTGACG TGATCGCGTTACGTGATTTCATGAAACGTATTGAAACTGTGATCCGGCAG ATACCAACGTACCGTGATGAAGACATTTCTTACGAACGTGAGGAAATCTT TATAGATAGCGAAGACGATTGTTCATACTTAGTGTCTGGGAGTGACGGTG TTGTTATAAAATATAATATAACCGTTCAACTGAAACTTAGATGTTTTATA TCTGGAAATCCAGAGTTGAAGTTGTTCCTAAATGACGTCAACAACCAAGA TATTTTATCGCGAACTAAGGAGGCATTGTCGAAAGAGAATAAACGAACCA ATAATTGGATTGTACCAGAAAATTACGAATTTAACCCTTGTATTGATGTG AAAAAATCGCAGGACGAAGGAGGCGTGGTTTTCACTCCACCTGATGGATG CAGTTTTGAGCTTTTACGTTTTCGGTTAAGGAAGCGAAACCCCCTTCCTA TTACCGTTAAATCCAGTCTGGAAGTGTTAGCTTTAAAGTCGGTCCATTTG AAGGCAGAGGTTCGAGTTAACGGCGACGGTAAAAGTATCCGGCATAAACG GAATAATGTTATTTTGTATATACCAGTACCATCATCTTGGAGTAAACTGT TCTTAAAATCAAGACTTGTGGGTCGAATTGCCAAATATTTGAGTGTAAAA TCATCTTTAAAATCTCAACGTGTGTCTAGAGCTTCTAACGCACGTGCTTC TTTCGAGATAAGTACAGGGTGTGCAAGGTACGAACCAGCTTACGGTGCTA TTATATGGGAGTTGGGTAACTTGCCGATTATACGTGATGGTCTACCGGCA GACGCGACTCATACTTTTCAATGTACTATCGAACTTCCTTTCCCGCTACA TATAAGAGATGATTTTCAACCGTATTCTTATTTAGAATTTAACATCAAAC AACAGATGGGATCGAACGTTTCAGTTGAAGAGGTTTTACTTTCTGATGGG CGTGTCCCTGAAAAATGGGTGTGTTATCGTTCGAATTTCACGTACAGAAT TGAAATGCTTATTTTGGAGGATGGAAAAGAAAGGACGTAAATGGCGACCG GCTTCCTTTACGGCTCACACGGTAACAATACTCGAGGAAAATCTAAAAAG AAAACGTTAAAGGACTACAATCTTTACTTGAAAGAGACCAGCAGCCAATC AGAAGATAATGTTGAAACAGAGAGTTTAATCAGTTTACGAGAGGAGACCT CTGATCTCAGTTTTAGTGGTCACAATAAATTTGAAGATTCTCATGTCGAT GGTTATTTTCGACCACAGTTGAGATTAAAATCGCCCACTAGACAATATCC TTCAATTGTGGGAGACGAGGAGAGAGAGAACGATGAAATGAGAGAGAGGA GAAGAGACATCGAGGATGATCATAATGTTATTGACGGGGAAGATTCTCAG ACGCAGATGTTTTCTTCTACTGATTCGACAACAAAGATCATCATCAAAGA AACAAAAAGAAGAGGGATAAAAGAAGAACAAAAGGAAAGTGTAGATGGGG GATTATTATTGAAAAAGAAGAAGAATAGAAATGAAGAATCAGAATCAGAA GAAAAAGATGCTGATGAGAAAGAAAGAAACGAAGATGTGTTATTTTTCTC TTCTTGGTCTCCTTCTTCTTCTTCTTGTTCAACTTCAAAAACGACATTCA CTACTAATAAACACAAAGAAGCAAAACGAACAGTAAGGAATAATACAAAC AAACGTTACCGAACAATAACAAAGAATCAGAAAAAGAAGAGTGAGCTTCT GTTAAAAAATAATCATCAAACTGAAGAAGAAGAAGAAAAAAAAGACGTTC TCCTTCAACAACGACGACAACGAAAAGGAGAAAAAGAAGAAACAGGAGAC TATTTAATTCAAACTAATAATATCAGTAATGGTAAAAATAGTTTACAATC TTCTAGTAATCGTAAAAACATATCATCGACTGTTTTGACTCGTCATCATC AAAAACCACAACAAACTTCTTCAAAGTTAAACAACAGTCGTTCTCACCAA AAAGAATATTCTATATTTTCATTGAGTAGTCATAATAACAAACGAAAACG TAAAAGTTTTGGTGGATTTCGAAGGAAAAGTATGGAGGAAGGAGCAGCTA CATCATCTAACGAAGAAGAAAATACAATCATGTCTCCTCAACAACAGACA ATACGTGCTGACCAATTCAACAAAATATGCCCATCACCTTTTGATGACGT ACCCGGCTTCCGTCGCTCGAACACGATGCAACACCGAAAATCTAAAAGAG ATAGTCTGAACTCTAATTCAACAGCAGCTGTAGGTAGAATGTCAAAATCT TTTAGTTTTGATTTATCCTCGTCGTCGAAAGTGCCAGGACCGGTGGCTTT AGGTCGTGATAAATGGATCCAGTTTGAGGAGGATCGAGGTGAAGAAAATA TTTTTCAAGAGGAAGAGCATCAAATAAGTCCGGTATCTATCCAATCACCA CAGAAAATAGACTTTGAATTTTTCCCAGAATTGACTAGCGAAACTGATCA AATGATTTTAGATTCTCATGTCGCCGAGAAAGATGTTGATTCTGAAAACG AAGTGGATAAACTTAAAGAACAATCTACGGGAATCGCTACCAGAAGTGTT GAAAACCTTTTAGAAACAGTCAACAAAACTGTGACTTTACTCAAAGGTTC TATAACTAATCGAGAAATATCTGACCCTGACGAACGTAAAGAGTTTGTTA ACACTGATACTCCAGACGATTTGTCATCAATGATATCTGACGAAATTATC AGTCTTGAATTTGACACCGACGAGGAGAAATTTCGTGATACCCCCGTCAA GCAATTCCCAGACGTTTCTTTATTTCAAGTGTCAGTTGTTGGTACGAATC GAGATAACTTGAGAATCGAACGCAAAAATAGTGTTGATCACGTGACAAAG GATAACGGTAGTAATGATGTTTTGGATGAATATCCTCCAACCACTCAACG TAATAGTTGGAAATTATGGTACCGTTATCCGGATAAGAAAATGAAGATGG GACGACGTCGTAAATGGACACCCGTCATTGCTCACGTTGAGAATAATTTT CTCAAATTGAATAGTCTGAACGGTTGTACGCCGGAAATTAAGCGAGAGTA TCCCTTACATCCATTCTGCAGTTTCACGGCGCCTACAATGCATAAAGGAA ATAAAGACGGAAAAGTACACTCTGTTAAATTACAATACGTCAAATATAAA GAAATAAGGCGTGTAAAACCAAGACTGGGTGTTGAGCACGTCCCTGTTTT TACACCGGTTGTTAAACTATCGTGCCGTGACGTGATCGCGTTACGTGATT TCATGAAACGTATTGAAACTGTGATCCGGCAGATACCAACGTACCGTGAT GAAGACATTTCTTACGAACGTGAGGAAATCTTTATAGATAGCGAAGACGA TTGTTCATACTTAGTGTCTGGGAGTGACGGTGTTGTTATAAAATATAATA TAACCGTTCAACTGAAACTTAGATGTTTTATATCTGGAAATCCAGAGTTG AAGTTGTTCCTAAATGACGTCAACAACCAAGATATTTTATCGCGAACTAA GGAGGCATTGTCGAAAGAGAATAAACGAACCAATAATTGGATTGTACCAG AAAATTACGAATTTAACCCTTGTATTGATGTGAAAAAATCGCAGGACGAA GGAGGCGTGGTTTTCACTCCACCTGATGGATGCAGTTTTGAGCTTTTACG TTTTCGGTTAAGGAAGCGAAACCCCCTTCCTATTACCGTTAAATCCAGTC TGGAAGTGTTAGCTTTAAAGTCGGTCCATTTGAAGGCAGAGGTTCGAGTT AACGGCGACGGTAAAAGTATCCGGCATAAACGGAATAATGTTATTTTGTA TATACCAGTACCATCATCTTGGAGTAAACTGTTCTTAAAATCAAGACTTG TGGGTCGAATTGCCAAATATTTGAGTGTAAAATCATCTTTAAAATCTCAA CGTGTGTCTAGAGCTTCTAACGCACGTGCTTCTTTCGAGATAAGTACAGG GTGTGCAAGGTACGAACCAGCTTACGGTGCTATTATATGGGAGTTGGGTA ACTTGCCGATTATACGTGATGGTCTACCGGCAGACGCGACTCATACTTTT CAATGTACTATCGAACTTCCTTTCCCGCTACATATAAGAGATGATTTTCA ACCGTATTCTTATTTAGAATTTAACATCAAACAACAGATGGGATCGAACG TTTCAGTTGAAGAGGTTTTACTTTCTGATGGGCGTGTCCCTGAAAAATGG GTGTGTTATCGTTCGAATTTCACGTACAGAATTGAAATGCTTATTTTGGA GGATGGAAAAGAAAGGACGTAAATGGCGACCGGCTTCCTTTACGGCTCAC ACGGTAACAATACTCGAGGAAAATCTAAAAAGAAAACGTTAAAGGACTAC AATCTTTACTTGAAAGAGACCAGCAGCCAATCAGAAGATAATGTTGAAAC AGAGAGTTTAATCAGTTTACGAGAGGAGACCTCTGATCTCAGTTTTAGTG GTCACAATAAATTTGAAGATTCTCATGTCGATGGTTATTTTCGACCACAG TTGAGATTAAAATCGCCCACTAGACAATATCCTTCAATTGTGGGAGACGA GGAGAGAGAGAACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00058551-exon-scaffold_311-1575043694:878568..878965 | TCONS_00058551-exon-scaffold_311-1575043694:878568..878965 | Clytia hemisphaerica | exon |
TCONS_00058551-exon-scaffold_311-1575043694:875222..878418 | TCONS_00058551-exon-scaffold_311-1575043694:875222..878418 | Clytia hemisphaerica | exon |
TCONS_00058551-exon-scaffold_311-1510915933:878568..878965 | TCONS_00058551-exon-scaffold_311-1510915933:878568..878965 | Clytia hemisphaerica | exon |
TCONS_00058551-exon-scaffold_311-1510915933:875222..878418 | TCONS_00058551-exon-scaffold_311-1510915933:875222..878418 | Clytia hemisphaerica | exon |
TCONS_00058551-exon-scaffold_311-1491911889:878568..878965 | TCONS_00058551-exon-scaffold_311-1491911889:878568..878965 | Clytia hemisphaerica | exon |
TCONS_00058551-exon-scaffold_311-1491911889:875222..878418 | TCONS_00058551-exon-scaffold_311-1491911889:875222..878418 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_311 | supercontig | scaffold_311:875222..878965 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
Term | Definition |
GO:0016192 | vesicle-mediated transport |
GO:0006886 | intracellular protein transport |
GO:0006897 | endocytosis |
Vocabulary: Cellular Component
Term | Definition |
GO:0030131 | clathrin adaptor complex |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0006897 |
endocytosis |
biological_process |
GO:0006886 |
intracellular protein transport |
biological_process |
GO:0016192 |
vesicle-mediated transport |
cellular_component |
GO:0030131 |
clathrin adaptor complex |
Blast
BLAST of TCONS_00058551 vs. Swiss-Prot (Human)
Match: STON2 (Stonin-2 OS=Homo sapiens GN=STON2 PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.593e-42 Identity = 123/478 (25.73%), Postives = 226/478 (47.28%), Query Frame = 2 Query: 1988 LDEYPPTTQR----NSWKLWYRYPDKKMKMGRRRKWTPVIAHV-ENNFLKLNSLNGCTPEIKREYPLHPFCSFTAPTMHKGNKDGKVHSVKLQYVKYKEIRRVKPRLGVEHVPVFTPVVKLSCRDVIALRDFMKRIETVIRQIPTYRDE----DISYEREEIFIDSEDDCSYLVSGSDGVVIKYNITVQLKLRCFISGNPELKLFLNDVNNQDILSRTKEALSKEN---KRTNNWIVPENYEFNPCIDVKKSQDEGGVVFTPPDGCSFELLRFR-LRKRNPLPITVKSSLEVLALKSVHLKAEVRVNGDGKSIRHKRN-----NVILYIPVPSSWSKLFLKSRLVGRIAKYLSVK----SSLKSQRVSRASNARASFEISTGCARYEPAYGAIIWELGNLPIIRDGLPADATHTFQCTIELPFPLHIRDDFQPYSYLEFNIKQQMGSNVSVEEVLLSDGRVPEKWVCYRSNFTYRIEM 3355
LD +PP + R + W + R P+KK M R W P+ + + +L+L G RE+ L + P + +++G++HS+++ V YKE ++ +P+ V H V+KL + F+ ++ + +P + ++Y EEI +D D+ S +VS D ++++++ ++ + F+SG E +L LN DIL + E + +++ T WI F+ C+D + ++F P D C FEL+RFR + LP T++++ V + V +++ +R++ + R NV++ PVPS W K F + ++G K L K +S S V S + ++ G A+YE A+ +I+W + LP + H F C +EL + F + +EF++ S SV + + D KWV Y ++++Y++ +
Sbjct: 412 LDAHPPGSARSQPRDGWPMMLRIPEKKNIMSSRH-WGPIFVKLTDTGYLQLYYEQGLEKPF-REFKLEICHEISEPRLQNYDENGRIHSLRIDRVTYKEKKKYQPKPAVAHTAEREQVIKLGTTNYDDFLSFIHAVQDRLMDLPVLSMDLSTVGLNYLEEEITVDVRDEFSGIVSKGDNQILQHHVLTRIHILSFLSGLAECRLGLN-----DILVKGNEIVLRQDIMPTTTTKWIKLHECRFHGCVDEDVFHNSRVILFNPLDACRFELMRFRTVFAEKTLPFTLRTATSVNGAE-VEVQSWLRMSTGFSANRDPLTQVPCENVMIRYPVPSEWVKNFRRESVLGE--KSLKAKVNRGASFGSTSV---SGSEPVMRVTLGTAKYEHAFNSIVWRINRLPDKNSA--SGHPHCFFCHLELGSDREVPSRFANHVNVEFSMPTTSASKASVRSISVEDKTDVRKWVNYSAHYSYQVAL 874
The following BLAST results are available for this feature:
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