TCONS_00059233 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059233
Unique NameTCONS_00059233
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1778

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059233 ID=TCONS_00059233|Name=TCONS_00059233|organism=Clytia hemisphaerica|type=transcript|length=1778bp
aaaaaatataaaagaatatcaCGATAGTAAAATGGTTATGTACAGACGTA
GATGCATTACAAGTTGCCACAATGTAAGTGGTTAACTGACTCGTGGGAAG
CTTGTTGGTGCTTCTTAAATgattAAGGATCACCCAATTAACAGATCGAG
GAGTGCCTATTTCATAGATCTTTGAACTATGGAGCAGATTACATCGCTGG
AGCAAGTCCGCCAATTAATGCTTGTCCAAGATGCAAAAAGTGTCAACAAA
GCGCAACAGTTCAACATTTCAAGCTTCGAGTTGGAGAAACATAGTCTGAC
CTTAGATGATCTCCTCAATCGAGGTGTTTCTATCAGAGACGATTCAACTC
CGACTGGCTGGCGACACATAACGGTCAAAGATAATGACTTTTTAGAATTT
CGCTTCAAATTGACAAAATTGATCGCTGAACTACAAAAGCAAATTGAATT
TATGATGACCTCAAGCCGGAGGGTCTTTGGCAATTTGAATGGGCATTCTA
TCTGTTTCTTGGTCGATTGTTCCGAAGCTAATTTCTATGGTGACCGGAAA
ATGTTATTGAAAGAAGCATTCAAATTACTGGTTGAAGAGCAATTATTGAA
CAAGACAAAAGTTCAACTGATTTCGTTCAGTTCGAACGCTCAAACCATCT
GGAATAAACCTATGATGCTTGCTGAGATGAAgAAGCACGAGGTGTTTGAC
TGGATTGATAACCTTGTGTCGGGTACAGGATGTAACCTGTTGGAAGCATT
GAAGTTATCAGCCAAACAACAAGACGTGGAGACAGTCTGTATCATACTTG
GGAGCAGGCCAGACCAAGATCCGGACATTTTGATCAATTACATGAAAGAG
AAATCTGTCGGACAGGCACGTATTTATCATACTGTCGATTTGGATTCCAA
AAGTTATGAAGCCAAGATGTTAATGAAGGAATTATCAGACATTGATGATG
GCAAATATCAAAGTTTCACGGAAGataaaaacCATGATATGATGAACAGT
ACTGACACCTGCTTGCTGTCTCAAGAACTGAAAAGGGCTTTGATTGTTTT
GTCACAACTGGATGAAATATCAAGTGGTGGTATAGTCAAGAACACTATCG
TCAACATCAAAAAGAATCCATCAGAAGCTTACAAGCAAGCACAACGTAAA
GAAGATAAAGAGCGTGAACTATTACGTCATCAATACGAACAATTGAAAAT
CCACCACTCGGTTGTCGAATCAAGATCTTCCAAAGAATGGCTGAAAAAGC
AAGGATTAAAAGCGAAAGGTTTGACGCTCTACCAAGTGATGGCACCAAAT
GCTTATTCATACGTTCAAAGTTATGTACCCTCATTGAACAAACACGTCAC
TTCACAAATACATCACAAGAGCATGGTACAGATGGAGTGGCATGATGGGA
GTTTAAAGAACGTCCACGTGGATCCCGTCATCCTTTTCAATTATCAAAAC
CATCTTCGAAGTGCATTGACAGTGTATCAGAAACGCGTGGAATGGTTGCA
AGGTGCTAGTAGAAAATACTATGGAAACATTGTCGAAAAAAGAGTGGTGT
TCATAGTTGACCTATCCATTAACACTCAATATGGTTTGGGAGAACTTCAT
CTTTCATTGAAACAGCTGTTCGAAGATCAATTGACCACTGATATGACTTT
CAACATGATCTGTATTGGAAAGTCACTAATGTTTTTCAATGAAGGTGGAT
TATTGAAAGCTACGATGGAGAATGTCGGTGCTTGTTGGAGATGGTTTTCG
AAACTATCGTGTGGCGGGACACGGAAAT
Run BLAST on NCBI

transcript from alignment at scaffold_320:31851..44614-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059233 ID=TCONS_00059233|Name=TCONS_00059233|organism=Clytia hemisphaerica|type=transcript|length=12764bp|location=Sequence derived from alignment at scaffold_320:31851..44614- (Clytia hemisphaerica)
AAAAAATATAAAAGAATATCACGATAGTAAAATGGTTATGTACAGACGTA
GATGCATTACAAGTTGCCACAATGTAAGTGGTTAACTGACTCGTGGGAAG
CTTGTTGGTGCTTCTTAAATGTAAGTATTTTATGCAATTGGATTCTTCAA
ATTTTTGATAAAAATATTTATTTTGTTTTGAAAACAATATATGTATTGGC
ATGTACGACGAACGAAATTTTAGTTATATATTCTTTGAAAATTTGAGTTT
CTGTATTCTTTTTTTTCAGGATTAAGGATCACCCAATTAACAGATCGAGG
AGTGCCTATTTCATAGATCTTTGAACTATGGAGCAGATTACATCGCTGGA
GCAAGTCCGCCAATTAATGGTATAATTAATAAAATATACTACTAAATCTT
TACTCAAACTAGTAATAAAATATATTTTATTTTGTGCCTTCAAAATAAGT
GGTGTTTTACTCATTATGATTTTTGCCTGCAAGGCCCCATTAAAACTTTT
ATCGAAGTTATGGTGCAGCATTTTGATAAGGTTTGTCTCACTGATAATTG
AACTTGATTTTTTCGGATGTTTTTTTTTCTTCAAAATAAACGATTTCGTT
CTAGAAAAGCCTACTTTTTTATGGGATTCTTAAACATACAATCTCAAATT
TTCTTTGATCTTTATTTCAGCTTGTCCAAGATGCAAAAAGTGTCAACAAA
GCGCAACAGTTCAACATTTCAAGCTTCGAGTTGGAGAAACATAGTCTGAC
CTTAGATGATCTCCTCAATCGAGGTGTTTCTATCAGGTAAAAATATGTAT
CTGTTGTTTGAAGATTTTAACGTCAATTGCTTCATTCATTGATGCTGAAA
AGAATAGAATAACCATTTTCCAGATGATACACATTGGGCTTTTCCAGAAA
TAGTCCGTGCCCCCTCCTCTGTTGAGGATATCGGATATCCAGGGGTTAAA
TATTTACAAGGGAGCGGATATCCAGGGGGTAAAGTGTCTTTTCAAGTAAA
ATATACGATATCCAGGGGTAAGCATCTTTATAAGAGAGGATATCCAGGGG
GGGTTGAGCATATTTTTAAGAGTGGATATCCAGGGGGTTCGAAAAATCAA
TATCCTCAACAGTGGGGGTAAAATTTCTTTCTGAAAAAGCCCATTATATG
GAAGGTACATACTAGCCCGGGGGGGGGGGACTACCCTTGTCGATCGACGG
GGGGGCTCCGCTGAGGTTCGAAAAATGGACCCTACGTGGGACTCGAAATT
TGCGAAAAAAGTGACCCTGAATGGGACTGAAATTCCAAAAANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGC
GGAGCATCCCCGTAACCCATTTTGCCCTAGTACCCCCCCCCGGGCATACT
AGATAAGGGTTAGTTACGTTGACGGCTAATACTAGCCGGGGTTATTCAAG
TGTTATTTTATTGATGTTGTATCTTTTCTATTTCTGTCTCCTAACAAACT
TCAAATAAATCCTTTTAGAGACGATTCAACTCCGACTGGCTGGCGACACA
TAACGGTCAAAGATAATGACTTTTTAGAATTTCGCTTCAAATTGACAAAG
TAAGATAGAATTTCTACACGCTTCTTTTTTATACGAACATCCAAAAAAAT
TAAGCCTTCGAATATTCCTAACTTTTTGAGTTTTAAGCCTAAAAATGTTC
TTAACATGTTCTAAATTTAACCATTTTGTGAGTATTTTGGTCCATTTTCC
TAAGAAATTAGGTGTTTTAGAGTCCACAAAGCCTTATAACGTTCTTAACT
TGTTCTTAAGATTTTGGCCATCGAAGCCTTATGTTCTTATATAGTTCTTA
TAAAAAACGTGTATATCTTTGATGCTCCTAATCATTTAATGTGACTAAAA
TAAGGTTTCGCCTATTTGAATGCTATGGGTTTTTTGAACCGTAGAACCGA
AGATTAGGGTTGTATTGGACGATCTCGGATTTAGAAGTCCAGTTAGATAT
GTCTTTAGATTCTATCTATCATTTTCCTACCCGTAAAAAATATTTGCGGT
TTACAATAACAATCATTTTCTTGTCATTTTCTTTAGATTGATCGCTGAAC
TACAAAAGCAAATTGAATTTATGATGACCTCAAGCCGGAGGGTTTGTAAT
ACAAATCTTCTTTTTATATTTAAATGCCGACTACTTTTATTTCTTTTCTC
CACTATTGATAAATTTTAGTAGTAAGTAAGAATTCTCGAAAACTCTTTCG
ACAGCTATTTGCCAGAATGTATTCTATTTCTATTCAATAATTCAGAGGGT
ACATACGTACAATTTCCTGAATGTAAAATGAAATGGTAATAAAATAAAAT
CTATCTAAATATAATAAAATCTAGAATTTAATAAAAAGGCAACCACTTTG
GATTAAGAGGTAATTGAATATTGCAGAAAAAAGAACTTAGATTACTGAGG
AATTTATGTAGTGAAAGGTGCCACTTTTTGGACCTACCCCGGTGGAGGTC
CTATAAATTAACCTGTCTTTGTTCGTTCGTCCGTTCGTTCGTTCGTTCGT
CTGTTACCAACTTTTCTCAGGATTGAATCATAATAGGAATCTTTTGATTT
TTGGTACAAAGGTGCAAAATGGTGATGGCCAAAATGTGACGGAGCCCGAT
TTCGAAAAAAAATTATCTATAAGAATCACTATTAACCCTTTGACTGCCGA
TGTCGGCATATGCCGACATGAGCATTTTCGATTTCTTTGCCGATGTCGGG
ATTTGCCGACATGGGCACTTTCCATTCCTTTGCCGCAAAATTTAACACTT
CTACAAAGATTTTGTATTAGATGGTTTGAAATGAAAAAAGATAATAATTA
AAAGCTTTTCTATGTAGAAAAATAACTATTCAACAATGTTCAACTCAAAA
TTATAGTCCTTGGCTGATACTTCATATATTATTCAGAAAATGAAGTCAAA
ATCGCTACCTTTTGCCCATGTCGGCATATGCCGACATCTGGCAAATAGGT
TGAACCTTCTTTTTTTCCCGTGGCAAATAGGTCGAACCTTAAAAAATACG
AACGGCAGTTAAAGGGTTAATAAGCATATATCAATGTTCTTAGCAGAATT
ACTCAATTTTGATGAGATAGATGTTTTTTTTGCTCACGAAGTCTTGAATA
TGAAAGAATATTTCAAGAGTATGAAATTTTGGTTTCTAAACGTTTTTTTA
TAAGAAACAAACGACTAATTTTAATAGATCGTCACTATTTGTGTTCTGAA
TGATTGTTTATAATGGTCACTCTCACGTAGATATCAATTATATATGTGTT
AAATGCATAACCAGGTAGGTCCATAAAAGTATCACTTGTTCTCCCTGGAT
TGCTCCATTTACCCTGGAAACTTCTCTTAGGCACCATGTACCCGGCACCA
TGCGCACCTTAACCGGATGCTCTACCTTCGTACGACGGTGGGCTTGAATA
TTAACCTAGTCAGTGGATAAAATTTGCAAACGTCTTAATTTCGCAAACTT
CTTCTTAACTTCGAAACCATGAAACACTCTGATTAAATTATTATTTTTGA
AATGTATAAAGGGAATTTTTTTCGCATTAATTTCCCTTTTCAGGTCTTTG
GCAATTTGAATGGGCATTCTATCTGTTTCTTGGTCGATTGTTCCGAAGCT
AATTTCTATGGTGACCGGAAAATGTTATTGAAAGAAGCATTCAAAGTAAG
CGATTTGTAATCTTTATGATGGGCTTTTCTTTATAAAATGTGTTTTTCAT
TTTCATTATGGATATTCTTAACTTTTTGGGGAAAATCCTAAAATATTCTT
ACGGTGTTCTCAGATTAAAATACCAATTCAACCTAAATTTAAAGGAGATC
TAACGGCAAAAATTTCTTTATCCTTATTTTTTTGACAGAGTACAGGCCTA
ATTAAATAAAAAACATTGCAAAAAGAACGAGGGCAAAATCTTTCATATCG
ATTGAATTATCATTGTTTAAAATATCTCTTTATTTGAAAGTAAGAGGGTT
TCGTGACGTCAGCGCTGAACTTTCATTTCGATAGAGAAACTGTTTGTAGA
CAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNCAAACAAGTTGTTCAGCAATGACGTCACACGCTTAAAT
CTTTAAAGGGATATAATTTCCTATTGAGTTAAAATTTTTCAACGTAATAT
AGCTCATTTTAATCCCCACAATATAAAGTTTCCATAATTTCCAAAAAAAA
TGTAGCAAAATTTTTGCCGTTAGATTAACTTTTGATAGAATTTGAATCAA
GTTGTGATTTTGTGCTCGTTGAAAAGATATTTGTGAGTGGAATATTATCA
AGCAAAAAAAATTGAACAAAAAAGAAAATGAAAATGAAGAAGAAAAAAAT
CAACTTCTTGTAGAAATGTAGTATAATTACCACTTTCACAGGAGTGATTC
TTCAATCTTCATCATCACTGTGAAAATTTTTTTCGAAAGTATTCATTCAA
TCAACAGATATCAAACAAAGTTTGTTCTTGGTTGATCGACAAAAGGCTGT
TTTTTGTCGTTTTTCACTACTTTATAGAGTCAACCTGCAATAAACTTTGT
TTGATATCTTTTGATTGAATGAATATTTTTGAAAATTCTTTTCACAGTGA
TGATGGATGATCTAAGATTGAAGAATCACTCCTGTGAAAATGGTAATTAT
ACCACATTTCTACAAGAAGTTGATTTTTTTCTTCTTCATTTTCATTTTCT
TTTTCTTTAGTTTTCAAATTTTTTTTGCTTGATAATACTCCACTCACAAA
AATCTTTTCAACAAGCACTAAATCGCAACTTGATTCAAATTCTATCTAAA
GTTACAGCCATTTTTGTCTCTGCTGCAAATTATTTTGAGACAGACTTTAA
GCTAATTGAAAATAATTACATATTGATTTAATTTAGTAGACAAAAAGGAT
TAGCGCCTTACGTTTTGAATAAATTTTGTTATTTTTGGTATACCAAAATT
TTCAGTCTTTTAACATACCTTTTGATTGACTGAGCCGACTTTAAAGTTTT
ATACACCAAAATGTAAGTTAAGCTTTCTTCGTCTATAGAATGATAAGAAA
TCTTTAACCGGCTGGCAATATCTCAACAAACCTGTATACTTTTTTGGCGC
GCCCGGTTTATAAAAGAAAAGGCAATATTATTTTAATAAGCTTGGTTCTG
ATTTGTAATGTTTTCATCGAATGTTTATTATTTTTTCACAGTTACTGGTT
GAAGAGCAATTATTGAACAAGACAAAAGTTCAACTGATTTCGTTCAGTTC
GAACGCTCAAACCATCTGGAATAAACCTATGATGCTTGCTGAGATGAAGT
AATTATTAATACATTTCATATATGTTTTTTTAATGAAAGTCTTGTTTCTG
GTATGGCAACACCTAGCAGTAGCACTACCTTTCAAATCTAAGATCATGGT
TAAAGAAACTTTTTGCTCTCTGGGAATTGATAACAAGTTAAACTGATATT
TTTCATTCGAAAAATCATAAACCTCACCATTGAGTTTACTTTTCGGACAA
TTCTCTTTCTAGTTTTATGTCTAATACATCTGAAGAGACCTGGGTACAAG
TTTTCTAAGTTCAAAATGACTTATGAATTATCCCACTAGAATTAGACGCA
TAATTAACATTACTAAAATTAAGCTAAAGACCTCTAAAATATTCGAATCA
TATTTTCTTCTTCACAACTTTTACAACTTTTATAAACACGAAGATTCTCA
TTTTCACATTTTTCAGGAAGCACGAGGTGTTTGACTGGATTGATAACCTT
GTGTCGGGTACAGGATGTAACCTGTTGGAAGCATTGAAGTTATCAGCCAA
ACAACAAGACGTGGAGACAGTCTGTATCATACTTGGGAGCAGGTGAAATT
TCTTGGATAATACCTCACTTTCGTTATATTTTCGTATATTTAGCTATAAA
TCGTGTTCTACCTTGAAGAATGTGGTGCTAGTCTCGTTATACTAGTACGC
GACCTATGGAAAATCTGCCATTATGGAAGCAAACGATCGAACTTGTAGAT
GTAATTCCATGCGTAAATCGAGCGTTTGCTTCCATAATGGCGGAAGCTCC
GTACCTTAGTCAAACTGAAAAACATCTAGAGTGTTCGAAATGAAAAACTT
CTAATACTAATACTAATACTAATACTTTTACTTGGAGAGATATTGTTCAT
TGTTGATTGGAGAGATATTGTTCATTCTTTCATTGGAGAGATATTGTTGA
TTGTTGATTGGAGAGATATTGTTATTATGGTTACCTTGACATAACATCTA
CTGACCTGTGACAGACAATTACCATCACTGACTGATTTTAACAGAAACTA
ATAGCAAGTAACTCACTTCAATTTTCAACTTCCACAAACAATTTTTTTCT
TGTTTCAAGGCCAGACCAAGATCCGGACATTTTGATCAATTACATGAAAG
AGAAATCTGTCGGACAGGCACGTATTTATCATACTGTCGATTTGGATTCC
AAAAGTTATGAAGCCAAGGTATCTAAAATTATCATTCAATTTTTTAACCA
TATTAATTTTTGTTGTTGTATTGATTTTCATAAACATGGCTTGAATACTT
TTCAGCTGGATCTTTTCTCTTTAGCAGTAGCCTTTTCTCAATCTAACTTT
CTTCAGATTCTCAATGTACTTCTATCTGATATATTCAATCAGATTTTTCA
AAGTCGTACTGGAGACTGTTGTCGTTGTTTAAGCCTATACAAAATTTTGA
AAAGTTTTATAAATCATCAAATAAAAGGTGATTTGAACTTTGAACTTTCT
TTGAAACTTTATAGATGTTAATGAAGGAATTATCAGACATTGATGATGGC
AAATATCAAAGTTTCACGGAAGATAAAAACGTAATAACGCTCTTCTTTTA
CTATTCATGATATGCACCATTGCAATGTCTTCTGACTACATCATGGACCC
AACAGCTGATTGGTTGAAAGTGACTTATTGACTGATTTTACGTCACTTAC
AACCAATCAGCTGTTAGATCCTTGATGTAATGTCAGAAGACATTGCAATG
GTGCATATCATGAATTAATTCAGATGATGTTGTCGATTGCTAGATATTTC
TTGACAGCTTCTACTTAGACTGGAGTCTATAAGCCGTGTAATATGGCGGC
AATATCGTTTTATATCACGATACGATAACTGTCAGGGGATAATATCGGTT
TGAGTTTGAATAAACTACAATTCCATTCTCTTATTTTTTTGCTCTTTCTA
CTAATGTCTGAATTTCTCGTCTAGCATTCTAAACTACCTTCGCTGGTTTT
GAAAAAGGTTCAGTGTTTGAAACAATAAAAAGCTTTCCTTCTATTTAGCA
TGATATGATGAACAGTACTGACACCTGCTTGCTGTCTCAAGAACTGAAAA
GGTACGTTGCAATGTCTTCAATGGATCCAACAGCTGATTGGTTGCAAGTG
ACGTATTGACTGATTTTACGCCACTTACAACCAATCAGCTGTTGGGTCCG
TGATGTAATGTCAGAAGACATTGCAATGGTGCATATCACGAATTTTTTAT
ATGTTTTTATCCCAATGCAATGTCGACCTGGATCTAAATCGGAAAACACT
ATTATTTATTACCTTGTTACAATTCTAGAGATATTAGCATGTAGTTCTGT
AGCCTGTAAATAAGTTTATGGCTGTAGATGAGGGTGACTCGAAGGCTCCC
TTTTTCTTTAGCTTTCCACCCCAAGGTAGTTGGAAGGTGCCAGTTTCAAT
TATGCAATTGTTTATTTTTCTTGGCAACTTTTTTCAGGGCTTTGATTGTT
TTGTCACAACTGGATGAAATATCAAGTGGTGGTATAGTCAAGAACACTAT
CGTCAACATCAAAAAGGTGAATTGCGAAGTTGTGTTCTTTTATTTCTTAA
GCTTGTGTTCAATTGATAAACTTTGCAGGGAGTTTTTTTTTAAAGAACAT
CTAAAGTTTTTGGATCCCTTCTATGTTCTAAGATTTTTTCAGGTTTAAGG
TTTTAAATGTTCTTATTTTCACCATTTTGTGAGTATCTTTGTGCAATGTC
CTAAGAAATTAGGTGTTTATTCAGAGTGCTTGAAGCCTTAAGATTTTAGC
CATTGAAGTCTTGTATTCTCATAAAGGTTGTTCTTATGAAAAGCGTTTAT
TTAGGATAAGCTTGGGGCTCAGCAATAAACTTTGGAGGGAGAACATTCAC
AGTTTATTGAAGGTATATTTAATGTCGACCATGGTAGTAATAGGAAAAGG
AAGAACGGAGTTAAGTGTTGAGCCCTTTTTTATAGTACCGGGTCCCGGTC
TCTCGACCATAGATTAGGACTTGGCCACTTGATTTTAAGGTGTCATAAAT
TGAGCGCCACAGAAGAAGTATGTAAATTATGGTGAAAACGATTGTCTACA
TTTCTGCTCGTAAAAAGCTTTTAGGCTACTTGGAAGCAGTGATGACCGAG
TATTCCAATGCGTGGAGGGTTAAAATTAATTACCTAAGAATCCTCGGGAT
CCTCCTATCAAATTTTGACCATATTAAAGAAAGATTATCATGGTTGTTTT
CTAATTTTCTCGATTTTATTTTTACCCAGAATCCATCAGAAGCTTACAAG
CAAGCACAACGTAAAGAAGATAAAGAGCGTGAACTATTACGTCATCAATA
CGAACAATTGAAAATCCACCACTCGGTTGTCGAATCAAGATCTTCCAAAG
AATGGCTGAAAAAGCAAGGATTAAAAGGTACCGTTTTTTGAAATATATAA
CCCATTGCATTTTCGAACAGTGTTCAAAGTTCTTCCATCTCAAAATTATA
TAACGATACAAAGTTATTCCGTTGCAAAAGTATATAACAATACAAAATTT
CAGTCTCACAATTCAGTAAACCTCTGGGAAAGTAGCAATAGGCTAAATTG
GTGTGTAAATTTTAAATTCCGTCTGACATTAAAGACTATGCTTCGACCAC
TGTTCGAAGAGATTTCTAAATATTTGATAATAGCACTTTGGCTACATGTG
AACCAAGATGTTAACGCCTTTGACCATTTGACCATTGCTCCATACTTATA
ACTTTCTCTATGTTCTTTTCATCGTTTCAGCGAAAGGTTTGACGCTCTAC
CAAGTGATGGCACCAAATGCTTATTCATACGTTCAAAGTTATGTACCCTC
ATTGAACAAACACGTCACTTCACAAATACATCACAAGGTTGGATAGGGGT
ACTTCATTTTCACGACAGCTTGCTTTCTTTCTTTCTCGACTGTAATCGTT
CATGTCGCACTCATTTTTCCCGTGTAATAATTAAGTGTAATAAGGCAGGG
GATTTCCTTTGTTTTTGATAGGGGTGAATGAAAAAAACTAATTCCGGCGA
ATTCTAGATTCTAGGCTCGCCAATTCCAAGCAAGCCCAGTGTATTCATTA
ACGTGAATATGTACTTGAGCCGGCGAATCGAATTTTGAGACCAGCAAATT
GTATTTTTTTTCGTTCCTTGCACCGGCACCGACCCCTGAATAAGGTATCG
TTTCTTCAATAGAGCATGGTACAGATGGAGTGGCATGATGGGAGTTTAAA
GAACGTCCACGTGGATCCCGTCATCCTTTTCAATTATCAAAACCATCTTC
GAAGTGCATTGACAGTGTATCAGAAACGCGTGGAATGGTTGCAAGGTGCT
AGTAGAAAATACTATGGAAACATTGTCGAAAAAAGGTGAAATAGCGTAAA
TTATGGGTTCTGGTTTATGGTATATATTTGGTTCGAACTGACTGCCTCAA
ATTATTATTATCTTAAGTGCGTAAAATCAGCATCCCCCCCACCGGTAAAT
TGAAGTCCGTGATTGGATCTTATAGGGTACACCCCCCCCCCAGAATAGTG
GGGAGNTATCTTAAGTGCGTAAAATCAGCATCCCCCCCACCGGTAAATTG
AAGTCCGTGATTGGATCTTATAGGGTCCCCCCCCCCCCCAGAAGTTTGGG
TACTTAAAAAAACAGAAAAAAAAATTAAAAAAAGCCAGGTACCTGGAAGT
ATTCTTAAATTTAGGGGGGGTACCTGATATGTTTGGGGTACCTGCATTTT
CATTAGTGGGGGTGGGGGCTGTTGTTTTTGTATGAAGTATTTTCCTTGAC
TAACCCAATTTTCCAATTTTCAATCGAACCATTTCATTCAGAAGACTTTA
TAAAAAGGGGGTACCTCAAAGTTGGGGGGCTCTTTTAGAATTCTAAAAAT
GTTGGGGGTACCAAAATGATTGGGGGTACCTAAATTTTTTGGGGTACCCG
AACCCTGGATGACCCTGAGGATCCTTCCCACTGGAAATCGACTTACACAT
TGATAGCTAGACATATATGAACTATCCATTAAAGAGAATTTCTTTCCTTT
TGTTTAGAGTGGTGTTCATAGTTGACCTATCCATTAACACTCAATATGGT
TTGGGAGAACTTCATCTTTCATTGAAACAGCTGTTCGAAGATCAATTGAC
CACTGATATGACTTTCAACATGATCTGGTAAAGTTTTAATTCAGATGGTT
TGAGACATTTGACATGTGGATTTGTTCCATTGTTCTGAGCAATACCTCAA
AATATTTTTTGATTAATCATTTTTCAAAGTCAAGATATTTTTAGTCACAA
TTTTTTCACCTTTAGCAAGAAACGAATAGAATTTCAACGTAAGAAGCGTG
TAAGAACTCATTAGAAATTTAAATAGAAAGAATAGAATAGAAATTTCAAA
TTGTGATATCTCGAATTTGGAAAATATTTAGACAACAATACTTGAAGGTT
TTACCCGGAGTTGGAAAATTGCTACTTATTTTATGTAGAATTCCCTACCA
AAAAACTCACACGATACACTGAGATTTCAACATTTTGAGAGATGGGAAAC
AGTAATCACCGTCTTTTTTCATTTTCTACGACTTAGCTAAACCTACATCA
AATTTAAGTAAAAGTTATCGGACAGTTGCGAGTACAATATGAGAAATTCT
GCCAATATTTCCATATTGTATCGCAAATATTTTTTGGATCGCCGATAATA
CACACCTATTTGAATCTTTTTCATAGTATTGGAAAGTCACTAATGTTTTT
CAATGAAGGTGGATTATTGAAAGCTACGATGGAGAATGTCGGTGCTTGTT
GGAGGTCAGTTTAATGTTGTTATTGTGCTGGTTACTGATCTCTATGTACA
GTGTTAAAGGTTAGACGGATTTGCATCTCAGACGGAAAATTCTTGATATT
CATGACGTAATCATTAATACTAAAACACCCAAAATTCACCGGGCGTTTGC
CACCAGTTTTGAATTTGAGCAATGTTACTTGTGCTGGTTACTGACCTCTA
TATACAGTGTTTTTACATAATCTTCCGTCTGACACGGATTTCCGCCGCAG
CGAAGTAGATGTGAAGTAGATAAGAAGCTTTTCCATCTCAAATTTATGAA
TAATTCGCTAAAATGTCGAGAATTAGTGCTTATTTGCTGTGCTAAATCCA
TTTTTCGTCACAGATGAAAACCTTGCCTTAGCTGCATTTAATATTTTTTT
AAAGATTCTTTAAAGGTTGATTGTCAGTAAAAAATTCATTAAAATTTAAT
TCCCTTATAAGGATTATGGATAAAAGAAAAACTCTCTGTCATAGGTTTTA
AGCTCCTCTCAGATCGGTCACTACTTTAATCGGATTAAATTTCGCAAACG
AAAAAAATCGTGAACTTTTTTGGATTAAGTTTCGTGAGTTAAAGTTTTGA
AAAATTTCGCGTGGATTTAATTTCGCGAATAAGCCTGAATAAGCTTGAAA
AATAATTATTTCGCGAAAATGGCAAAAATTAGCGAAATCGCGAAATTTAA
TCTCGCAAAAGTTAATCAGATTAAAGTATTAATTCTTCCCGTTTTGAAAG
CGAAAGATTGATCTTGAGGCTCGACTTGATAAGAAAATTTTTTGTATGAT
TTCATCTTTTCTATTCCATATCATAGATGGTTTTCGAAACTATCGTGTGG
CGGGACACGGAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037304XLOC_037304Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059233-exon-scaffold_320-1575043694:44495..44614TCONS_00059233-exon-scaffold_320-1575043694:44495..44614Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:44246..44345TCONS_00059233-exon-scaffold_320-1575043694:44246..44345Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:43829..43944TCONS_00059233-exon-scaffold_320-1575043694:43829..43944Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:42516..42596TCONS_00059233-exon-scaffold_320-1575043694:42516..42596Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:41974..42028TCONS_00059233-exon-scaffold_320-1575043694:41974..42028Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:40420..40521TCONS_00059233-exon-scaffold_320-1575043694:40420..40521Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:38467..38573TCONS_00059233-exon-scaffold_320-1575043694:38467..38573Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:37923..38048TCONS_00059233-exon-scaffold_320-1575043694:37923..38048Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:37297..37405TCONS_00059233-exon-scaffold_320-1575043694:37297..37405Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:36935..37000TCONS_00059233-exon-scaffold_320-1575043694:36935..37000Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:36414..36466TCONS_00059233-exon-scaffold_320-1575043694:36414..36466Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:35949..36027TCONS_00059233-exon-scaffold_320-1575043694:35949..36027Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:35088..35235TCONS_00059233-exon-scaffold_320-1575043694:35088..35235Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:34628..34734TCONS_00059233-exon-scaffold_320-1575043694:34628..34734Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:34130..34302TCONS_00059233-exon-scaffold_320-1575043694:34130..34302Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:33338..33457TCONS_00059233-exon-scaffold_320-1575043694:33338..33457Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:32711..32788TCONS_00059233-exon-scaffold_320-1575043694:32711..32788Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:31851..31888TCONS_00059233-exon-scaffold_320-1575043694:31851..31888Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:44495..44614TCONS_00059233-exon-scaffold_320-1510915933:44495..44614Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:44246..44345TCONS_00059233-exon-scaffold_320-1510915933:44246..44345Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:43829..43944TCONS_00059233-exon-scaffold_320-1510915933:43829..43944Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:42516..42596TCONS_00059233-exon-scaffold_320-1510915933:42516..42596Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:41974..42028TCONS_00059233-exon-scaffold_320-1510915933:41974..42028Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:40420..40521TCONS_00059233-exon-scaffold_320-1510915933:40420..40521Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:38467..38573TCONS_00059233-exon-scaffold_320-1510915933:38467..38573Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:37923..38048TCONS_00059233-exon-scaffold_320-1510915933:37923..38048Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:37297..37405TCONS_00059233-exon-scaffold_320-1510915933:37297..37405Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:36935..37000TCONS_00059233-exon-scaffold_320-1510915933:36935..37000Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:36414..36466TCONS_00059233-exon-scaffold_320-1510915933:36414..36466Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:35949..36027TCONS_00059233-exon-scaffold_320-1510915933:35949..36027Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:35088..35235TCONS_00059233-exon-scaffold_320-1510915933:35088..35235Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:34628..34734TCONS_00059233-exon-scaffold_320-1510915933:34628..34734Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:34130..34302TCONS_00059233-exon-scaffold_320-1510915933:34130..34302Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:33338..33457TCONS_00059233-exon-scaffold_320-1510915933:33338..33457Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:32711..32788TCONS_00059233-exon-scaffold_320-1510915933:32711..32788Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:31851..31888TCONS_00059233-exon-scaffold_320-1510915933:31851..31888Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:44495..44614TCONS_00059233-exon-scaffold_320-1491911889:44495..44614Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:44246..44345TCONS_00059233-exon-scaffold_320-1491911889:44246..44345Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:43829..43944TCONS_00059233-exon-scaffold_320-1491911889:43829..43944Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:42516..42596TCONS_00059233-exon-scaffold_320-1491911889:42516..42596Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:41974..42028TCONS_00059233-exon-scaffold_320-1491911889:41974..42028Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:40420..40521TCONS_00059233-exon-scaffold_320-1491911889:40420..40521Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:38467..38573TCONS_00059233-exon-scaffold_320-1491911889:38467..38573Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:37923..38048TCONS_00059233-exon-scaffold_320-1491911889:37923..38048Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:37297..37405TCONS_00059233-exon-scaffold_320-1491911889:37297..37405Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:36935..37000TCONS_00059233-exon-scaffold_320-1491911889:36935..37000Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:36414..36466TCONS_00059233-exon-scaffold_320-1491911889:36414..36466Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:35949..36027TCONS_00059233-exon-scaffold_320-1491911889:35949..36027Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:35088..35235TCONS_00059233-exon-scaffold_320-1491911889:35088..35235Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:34628..34734TCONS_00059233-exon-scaffold_320-1491911889:34628..34734Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:34130..34302TCONS_00059233-exon-scaffold_320-1491911889:34130..34302Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:33338..33457TCONS_00059233-exon-scaffold_320-1491911889:33338..33457Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:32711..32788TCONS_00059233-exon-scaffold_320-1491911889:32711..32788Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:31851..31888TCONS_00059233-exon-scaffold_320-1491911889:31851..31888Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_320supercontigscaffold_320:31851..44614 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	9.34581	6.78207	8.22398	10.9193	0.976618	0	0	1.87519	0.535939	1.05013	0.88869	0	0.0197294	0.0216056	0.0132206	1.17184e-07	0	0	0	0	4.6626	7.38622	0	0.364178	0	0
Blast
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BLAST of TCONS_00059233 vs. Swiss-Prot (Human)
Match: VWA3A (von Willebrand factor A domain-containing protein 3A OS=Homo sapiens GN=VWA3A PE=2 SV=3)

HSP 1 Score: 268.085 bits (684), Expect = 1.493e-77
Identity = 163/536 (30.41%), Postives = 287/536 (53.54%), Query Frame = 2 
Query:  188 ITSLEQVRQLMLVQDAKSVNKAQQFN---ISSFELEKHSLTLDDLLNRGVSIRDDSTPTGWRHITVKDNDFLEFRFKLTKLIAELQKQIEFMMTSSRRVFGNLNGHSICFLVDCSEANFYGDRKMLLKEAFKLLVEEQLLNKTKVQLISFSSNAQTIWNKPMMLAEMKKHEVFDWIDNLVSGTGCNLLEALKLSAKQQDVETVCIILGSRPDQDPDILINYMKEKSVGQARIYHTVDLDSKSYEAKMLMKELSDIDDGKYQSFTEDKNHDMMNSTDTCLLSQELKRALIVLSQLDEISSGGIVKNTIVNIKKNPSEAYKQAQ----RKEDKERELLRHQYEQLKIHHSVVESRSSKEWLKKQGLKAKGLTLYQVMAPNAYSYVQSYVPSLNKHVTSQIHHKSMVQMEWHDGSLKNVHVDPVILFNYQNHLRSALTVYQKRVEWLQGASRKYYGNIVEKRVVFIVDLSINTQYGLGELHLSLKQLFEDQLTTDMTFNMICIGKSLMFFNEGGLLKATMENVGACWRWFSKLSCGGTR 1774
            +T + Q + L+ +Q +++ +   + +   +S+  L+   LTL DL+++G  + ++ T    + I         F  KL+  I   Q++I+++  +S++ FG + G  +  L+D S A   G +K   ++    L++EQL +K K+ ++SF +NA ++W  PM ++     E+  W+  L    G NLL+ALK     + ++++  I+ S PDQ  +IL +Y+++ ++G+  I H +           ++K L++   G Y  ++    H    S D   L  E+++A  +LS +  +      +     +++  +E           K  K    L  ++  L         ++S EWLK  GLKAK L+LYQV+APNA+S V+ +VP L K V+S IH K+M+Q EWHDG++KN+HVDP  L+ YQ  L  A+ +Y++R+EWL  ASR+ +G + EKRVV ++D+S      +  +  SL+ L E+QL+    FN+I  G ++  +    ++  +  N+ + WRW   L C G+R
Sbjct:   65 VTHVNQTQDLLRLQGSETQSSDWEDSEDWLSAHSLKCQKLTLADLISQGTEVLEEGTNVV-QKICFSTQIIRHFESKLSDTIEVYQERIQWLTENSKKAFGLIKGARVSILIDVS-AISSGPQKEEFQKDLMSLIDEQLSHKEKLFVLSFGTNAGSLWPDPMEVSASTLQELKLWVKTLQPDGGSNLLQALKKIFTLKGLDSLVAIMRSCPDQPSEILSDYIQQSTMGRDLIIHFITYRCDDQMPPAVLKNLAEAVRGYYHCYSPKMEH--YTSRDMDELLAEIQKAQSLLSHVQALQHSSPCEALTCTMEEISTEITNGPLISLLPKPPKHDAPLTIEFPNL--------DKTSAEWLKVNGLKAKKLSLYQVLAPNAFSPVEEFVPILQKTVSSTIHEKAMIQFEWHDGTVKNIHVDPPFLYKYQQQLSRAMRMYERRIEWLSLASRRIWGTVCEKRVVVLLDISATNSMYIIHIQHSLRLLLEEQLSNKDCFNLIAFGSTIESWRP-EMVPVSHNNLQSAWRWALNLRCRGSR 587
The following BLAST results are available for this feature:
BLAST of TCONS_00059233 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VWA3A1.493e-7730.41von Willebrand factor A domain-containing protein ... [more]
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