TCONS_00059233 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059233
Unique NameTCONS_00059233
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1778

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059233 ID=TCONS_00059233|Name=TCONS_00059233|organism=Clytia hemisphaerica|type=transcript|length=1778bp
aaaaaatataaaagaatatcaCGATAGTAAAATGGTTATGTACAGACGTA
GATGCATTACAAGTTGCCACAATGTAAGTGGTTAACTGACTCGTGGGAAG
CTTGTTGGTGCTTCTTAAATgattAAGGATCACCCAATTAACAGATCGAG
GAGTGCCTATTTCATAGATCTTTGAACTATGGAGCAGATTACATCGCTGG
AGCAAGTCCGCCAATTAATGCTTGTCCAAGATGCAAAAAGTGTCAACAAA
GCGCAACAGTTCAACATTTCAAGCTTCGAGTTGGAGAAACATAGTCTGAC
CTTAGATGATCTCCTCAATCGAGGTGTTTCTATCAGAGACGATTCAACTC
CGACTGGCTGGCGACACATAACGGTCAAAGATAATGACTTTTTAGAATTT
CGCTTCAAATTGACAAAATTGATCGCTGAACTACAAAAGCAAATTGAATT
TATGATGACCTCAAGCCGGAGGGTCTTTGGCAATTTGAATGGGCATTCTA
TCTGTTTCTTGGTCGATTGTTCCGAAGCTAATTTCTATGGTGACCGGAAA
ATGTTATTGAAAGAAGCATTCAAATTACTGGTTGAAGAGCAATTATTGAA
CAAGACAAAAGTTCAACTGATTTCGTTCAGTTCGAACGCTCAAACCATCT
GGAATAAACCTATGATGCTTGCTGAGATGAAgAAGCACGAGGTGTTTGAC
TGGATTGATAACCTTGTGTCGGGTACAGGATGTAACCTGTTGGAAGCATT
GAAGTTATCAGCCAAACAACAAGACGTGGAGACAGTCTGTATCATACTTG
GGAGCAGGCCAGACCAAGATCCGGACATTTTGATCAATTACATGAAAGAG
AAATCTGTCGGACAGGCACGTATTTATCATACTGTCGATTTGGATTCCAA
AAGTTATGAAGCCAAGATGTTAATGAAGGAATTATCAGACATTGATGATG
GCAAATATCAAAGTTTCACGGAAGataaaaacCATGATATGATGAACAGT
ACTGACACCTGCTTGCTGTCTCAAGAACTGAAAAGGGCTTTGATTGTTTT
GTCACAACTGGATGAAATATCAAGTGGTGGTATAGTCAAGAACACTATCG
TCAACATCAAAAAGAATCCATCAGAAGCTTACAAGCAAGCACAACGTAAA
GAAGATAAAGAGCGTGAACTATTACGTCATCAATACGAACAATTGAAAAT
CCACCACTCGGTTGTCGAATCAAGATCTTCCAAAGAATGGCTGAAAAAGC
AAGGATTAAAAGCGAAAGGTTTGACGCTCTACCAAGTGATGGCACCAAAT
GCTTATTCATACGTTCAAAGTTATGTACCCTCATTGAACAAACACGTCAC
TTCACAAATACATCACAAGAGCATGGTACAGATGGAGTGGCATGATGGGA
GTTTAAAGAACGTCCACGTGGATCCCGTCATCCTTTTCAATTATCAAAAC
CATCTTCGAAGTGCATTGACAGTGTATCAGAAACGCGTGGAATGGTTGCA
AGGTGCTAGTAGAAAATACTATGGAAACATTGTCGAAAAAAGAGTGGTGT
TCATAGTTGACCTATCCATTAACACTCAATATGGTTTGGGAGAACTTCAT
CTTTCATTGAAACAGCTGTTCGAAGATCAATTGACCACTGATATGACTTT
CAACATGATCTGTATTGGAAAGTCACTAATGTTTTTCAATGAAGGTGGAT
TATTGAAAGCTACGATGGAGAATGTCGGTGCTTGTTGGAGATGGTTTTCG
AAACTATCGTGTGGCGGGACACGGAAAT
Run BLAST on NCBI

transcript from alignment at scaffold_320:31851..44614-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059233 ID=TCONS_00059233|Name=TCONS_00059233|organism=Clytia hemisphaerica|type=transcript|length=12764bp|location=Sequence derived from alignment at scaffold_320:31851..44614- (Clytia hemisphaerica)
AAAAAATATAAAAGAATATCACGATAGTAAAATGGTTATGTACAGACGTA GATGCATTACAAGTTGCCACAATGTAAGTGGTTAACTGACTCGTGGGAAG CTTGTTGGTGCTTCTTAAATGTAAGTATTTTATGCAATTGGATTCTTCAA ATTTTTGATAAAAATATTTATTTTGTTTTGAAAACAATATATGTATTGGC ATGTACGACGAACGAAATTTTAGTTATATATTCTTTGAAAATTTGAGTTT CTGTATTCTTTTTTTTCAGGATTAAGGATCACCCAATTAACAGATCGAGG AGTGCCTATTTCATAGATCTTTGAACTATGGAGCAGATTACATCGCTGGA GCAAGTCCGCCAATTAATGGTATAATTAATAAAATATACTACTAAATCTT TACTCAAACTAGTAATAAAATATATTTTATTTTGTGCCTTCAAAATAAGT GGTGTTTTACTCATTATGATTTTTGCCTGCAAGGCCCCATTAAAACTTTT ATCGAAGTTATGGTGCAGCATTTTGATAAGGTTTGTCTCACTGATAATTG AACTTGATTTTTTCGGATGTTTTTTTTTCTTCAAAATAAACGATTTCGTT CTAGAAAAGCCTACTTTTTTATGGGATTCTTAAACATACAATCTCAAATT TTCTTTGATCTTTATTTCAGCTTGTCCAAGATGCAAAAAGTGTCAACAAA GCGCAACAGTTCAACATTTCAAGCTTCGAGTTGGAGAAACATAGTCTGAC CTTAGATGATCTCCTCAATCGAGGTGTTTCTATCAGGTAAAAATATGTAT CTGTTGTTTGAAGATTTTAACGTCAATTGCTTCATTCATTGATGCTGAAA AGAATAGAATAACCATTTTCCAGATGATACACATTGGGCTTTTCCAGAAA TAGTCCGTGCCCCCTCCTCTGTTGAGGATATCGGATATCCAGGGGTTAAA TATTTACAAGGGAGCGGATATCCAGGGGGTAAAGTGTCTTTTCAAGTAAA ATATACGATATCCAGGGGTAAGCATCTTTATAAGAGAGGATATCCAGGGG GGGTTGAGCATATTTTTAAGAGTGGATATCCAGGGGGTTCGAAAAATCAA TATCCTCAACAGTGGGGGTAAAATTTCTTTCTGAAAAAGCCCATTATATG GAAGGTACATACTAGCCCGGGGGGGGGGGACTACCCTTGTCGATCGACGG GGGGGCTCCGCTGAGGTTCGAAAAATGGACCCTACGTGGGACTCGAAATT TGCGAAAAAAGTGACCCTGAATGGGACTGAAATTCCAAAAANNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGC GGAGCATCCCCGTAACCCATTTTGCCCTAGTACCCCCCCCCGGGCATACT AGATAAGGGTTAGTTACGTTGACGGCTAATACTAGCCGGGGTTATTCAAG TGTTATTTTATTGATGTTGTATCTTTTCTATTTCTGTCTCCTAACAAACT TCAAATAAATCCTTTTAGAGACGATTCAACTCCGACTGGCTGGCGACACA TAACGGTCAAAGATAATGACTTTTTAGAATTTCGCTTCAAATTGACAAAG TAAGATAGAATTTCTACACGCTTCTTTTTTATACGAACATCCAAAAAAAT TAAGCCTTCGAATATTCCTAACTTTTTGAGTTTTAAGCCTAAAAATGTTC TTAACATGTTCTAAATTTAACCATTTTGTGAGTATTTTGGTCCATTTTCC TAAGAAATTAGGTGTTTTAGAGTCCACAAAGCCTTATAACGTTCTTAACT TGTTCTTAAGATTTTGGCCATCGAAGCCTTATGTTCTTATATAGTTCTTA TAAAAAACGTGTATATCTTTGATGCTCCTAATCATTTAATGTGACTAAAA TAAGGTTTCGCCTATTTGAATGCTATGGGTTTTTTGAACCGTAGAACCGA AGATTAGGGTTGTATTGGACGATCTCGGATTTAGAAGTCCAGTTAGATAT GTCTTTAGATTCTATCTATCATTTTCCTACCCGTAAAAAATATTTGCGGT TTACAATAACAATCATTTTCTTGTCATTTTCTTTAGATTGATCGCTGAAC TACAAAAGCAAATTGAATTTATGATGACCTCAAGCCGGAGGGTTTGTAAT ACAAATCTTCTTTTTATATTTAAATGCCGACTACTTTTATTTCTTTTCTC CACTATTGATAAATTTTAGTAGTAAGTAAGAATTCTCGAAAACTCTTTCG ACAGCTATTTGCCAGAATGTATTCTATTTCTATTCAATAATTCAGAGGGT ACATACGTACAATTTCCTGAATGTAAAATGAAATGGTAATAAAATAAAAT CTATCTAAATATAATAAAATCTAGAATTTAATAAAAAGGCAACCACTTTG GATTAAGAGGTAATTGAATATTGCAGAAAAAAGAACTTAGATTACTGAGG AATTTATGTAGTGAAAGGTGCCACTTTTTGGACCTACCCCGGTGGAGGTC CTATAAATTAACCTGTCTTTGTTCGTTCGTCCGTTCGTTCGTTCGTTCGT CTGTTACCAACTTTTCTCAGGATTGAATCATAATAGGAATCTTTTGATTT TTGGTACAAAGGTGCAAAATGGTGATGGCCAAAATGTGACGGAGCCCGAT TTCGAAAAAAAATTATCTATAAGAATCACTATTAACCCTTTGACTGCCGA TGTCGGCATATGCCGACATGAGCATTTTCGATTTCTTTGCCGATGTCGGG ATTTGCCGACATGGGCACTTTCCATTCCTTTGCCGCAAAATTTAACACTT CTACAAAGATTTTGTATTAGATGGTTTGAAATGAAAAAAGATAATAATTA AAAGCTTTTCTATGTAGAAAAATAACTATTCAACAATGTTCAACTCAAAA TTATAGTCCTTGGCTGATACTTCATATATTATTCAGAAAATGAAGTCAAA ATCGCTACCTTTTGCCCATGTCGGCATATGCCGACATCTGGCAAATAGGT TGAACCTTCTTTTTTTCCCGTGGCAAATAGGTCGAACCTTAAAAAATACG AACGGCAGTTAAAGGGTTAATAAGCATATATCAATGTTCTTAGCAGAATT ACTCAATTTTGATGAGATAGATGTTTTTTTTGCTCACGAAGTCTTGAATA TGAAAGAATATTTCAAGAGTATGAAATTTTGGTTTCTAAACGTTTTTTTA TAAGAAACAAACGACTAATTTTAATAGATCGTCACTATTTGTGTTCTGAA TGATTGTTTATAATGGTCACTCTCACGTAGATATCAATTATATATGTGTT AAATGCATAACCAGGTAGGTCCATAAAAGTATCACTTGTTCTCCCTGGAT TGCTCCATTTACCCTGGAAACTTCTCTTAGGCACCATGTACCCGGCACCA TGCGCACCTTAACCGGATGCTCTACCTTCGTACGACGGTGGGCTTGAATA TTAACCTAGTCAGTGGATAAAATTTGCAAACGTCTTAATTTCGCAAACTT CTTCTTAACTTCGAAACCATGAAACACTCTGATTAAATTATTATTTTTGA AATGTATAAAGGGAATTTTTTTCGCATTAATTTCCCTTTTCAGGTCTTTG GCAATTTGAATGGGCATTCTATCTGTTTCTTGGTCGATTGTTCCGAAGCT AATTTCTATGGTGACCGGAAAATGTTATTGAAAGAAGCATTCAAAGTAAG CGATTTGTAATCTTTATGATGGGCTTTTCTTTATAAAATGTGTTTTTCAT TTTCATTATGGATATTCTTAACTTTTTGGGGAAAATCCTAAAATATTCTT ACGGTGTTCTCAGATTAAAATACCAATTCAACCTAAATTTAAAGGAGATC TAACGGCAAAAATTTCTTTATCCTTATTTTTTTGACAGAGTACAGGCCTA ATTAAATAAAAAACATTGCAAAAAGAACGAGGGCAAAATCTTTCATATCG ATTGAATTATCATTGTTTAAAATATCTCTTTATTTGAAAGTAAGAGGGTT TCGTGACGTCAGCGCTGAACTTTCATTTCGATAGAGAAACTGTTTGTAGA CAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNCAAACAAGTTGTTCAGCAATGACGTCACACGCTTAAAT CTTTAAAGGGATATAATTTCCTATTGAGTTAAAATTTTTCAACGTAATAT AGCTCATTTTAATCCCCACAATATAAAGTTTCCATAATTTCCAAAAAAAA TGTAGCAAAATTTTTGCCGTTAGATTAACTTTTGATAGAATTTGAATCAA GTTGTGATTTTGTGCTCGTTGAAAAGATATTTGTGAGTGGAATATTATCA AGCAAAAAAAATTGAACAAAAAAGAAAATGAAAATGAAGAAGAAAAAAAT CAACTTCTTGTAGAAATGTAGTATAATTACCACTTTCACAGGAGTGATTC TTCAATCTTCATCATCACTGTGAAAATTTTTTTCGAAAGTATTCATTCAA TCAACAGATATCAAACAAAGTTTGTTCTTGGTTGATCGACAAAAGGCTGT TTTTTGTCGTTTTTCACTACTTTATAGAGTCAACCTGCAATAAACTTTGT TTGATATCTTTTGATTGAATGAATATTTTTGAAAATTCTTTTCACAGTGA TGATGGATGATCTAAGATTGAAGAATCACTCCTGTGAAAATGGTAATTAT ACCACATTTCTACAAGAAGTTGATTTTTTTCTTCTTCATTTTCATTTTCT TTTTCTTTAGTTTTCAAATTTTTTTTGCTTGATAATACTCCACTCACAAA AATCTTTTCAACAAGCACTAAATCGCAACTTGATTCAAATTCTATCTAAA GTTACAGCCATTTTTGTCTCTGCTGCAAATTATTTTGAGACAGACTTTAA GCTAATTGAAAATAATTACATATTGATTTAATTTAGTAGACAAAAAGGAT TAGCGCCTTACGTTTTGAATAAATTTTGTTATTTTTGGTATACCAAAATT TTCAGTCTTTTAACATACCTTTTGATTGACTGAGCCGACTTTAAAGTTTT ATACACCAAAATGTAAGTTAAGCTTTCTTCGTCTATAGAATGATAAGAAA TCTTTAACCGGCTGGCAATATCTCAACAAACCTGTATACTTTTTTGGCGC GCCCGGTTTATAAAAGAAAAGGCAATATTATTTTAATAAGCTTGGTTCTG ATTTGTAATGTTTTCATCGAATGTTTATTATTTTTTCACAGTTACTGGTT GAAGAGCAATTATTGAACAAGACAAAAGTTCAACTGATTTCGTTCAGTTC GAACGCTCAAACCATCTGGAATAAACCTATGATGCTTGCTGAGATGAAGT AATTATTAATACATTTCATATATGTTTTTTTAATGAAAGTCTTGTTTCTG GTATGGCAACACCTAGCAGTAGCACTACCTTTCAAATCTAAGATCATGGT TAAAGAAACTTTTTGCTCTCTGGGAATTGATAACAAGTTAAACTGATATT TTTCATTCGAAAAATCATAAACCTCACCATTGAGTTTACTTTTCGGACAA TTCTCTTTCTAGTTTTATGTCTAATACATCTGAAGAGACCTGGGTACAAG TTTTCTAAGTTCAAAATGACTTATGAATTATCCCACTAGAATTAGACGCA TAATTAACATTACTAAAATTAAGCTAAAGACCTCTAAAATATTCGAATCA TATTTTCTTCTTCACAACTTTTACAACTTTTATAAACACGAAGATTCTCA TTTTCACATTTTTCAGGAAGCACGAGGTGTTTGACTGGATTGATAACCTT GTGTCGGGTACAGGATGTAACCTGTTGGAAGCATTGAAGTTATCAGCCAA ACAACAAGACGTGGAGACAGTCTGTATCATACTTGGGAGCAGGTGAAATT TCTTGGATAATACCTCACTTTCGTTATATTTTCGTATATTTAGCTATAAA TCGTGTTCTACCTTGAAGAATGTGGTGCTAGTCTCGTTATACTAGTACGC GACCTATGGAAAATCTGCCATTATGGAAGCAAACGATCGAACTTGTAGAT GTAATTCCATGCGTAAATCGAGCGTTTGCTTCCATAATGGCGGAAGCTCC GTACCTTAGTCAAACTGAAAAACATCTAGAGTGTTCGAAATGAAAAACTT CTAATACTAATACTAATACTAATACTTTTACTTGGAGAGATATTGTTCAT TGTTGATTGGAGAGATATTGTTCATTCTTTCATTGGAGAGATATTGTTGA TTGTTGATTGGAGAGATATTGTTATTATGGTTACCTTGACATAACATCTA CTGACCTGTGACAGACAATTACCATCACTGACTGATTTTAACAGAAACTA ATAGCAAGTAACTCACTTCAATTTTCAACTTCCACAAACAATTTTTTTCT TGTTTCAAGGCCAGACCAAGATCCGGACATTTTGATCAATTACATGAAAG AGAAATCTGTCGGACAGGCACGTATTTATCATACTGTCGATTTGGATTCC AAAAGTTATGAAGCCAAGGTATCTAAAATTATCATTCAATTTTTTAACCA TATTAATTTTTGTTGTTGTATTGATTTTCATAAACATGGCTTGAATACTT TTCAGCTGGATCTTTTCTCTTTAGCAGTAGCCTTTTCTCAATCTAACTTT CTTCAGATTCTCAATGTACTTCTATCTGATATATTCAATCAGATTTTTCA AAGTCGTACTGGAGACTGTTGTCGTTGTTTAAGCCTATACAAAATTTTGA AAAGTTTTATAAATCATCAAATAAAAGGTGATTTGAACTTTGAACTTTCT TTGAAACTTTATAGATGTTAATGAAGGAATTATCAGACATTGATGATGGC AAATATCAAAGTTTCACGGAAGATAAAAACGTAATAACGCTCTTCTTTTA CTATTCATGATATGCACCATTGCAATGTCTTCTGACTACATCATGGACCC AACAGCTGATTGGTTGAAAGTGACTTATTGACTGATTTTACGTCACTTAC AACCAATCAGCTGTTAGATCCTTGATGTAATGTCAGAAGACATTGCAATG GTGCATATCATGAATTAATTCAGATGATGTTGTCGATTGCTAGATATTTC TTGACAGCTTCTACTTAGACTGGAGTCTATAAGCCGTGTAATATGGCGGC AATATCGTTTTATATCACGATACGATAACTGTCAGGGGATAATATCGGTT TGAGTTTGAATAAACTACAATTCCATTCTCTTATTTTTTTGCTCTTTCTA CTAATGTCTGAATTTCTCGTCTAGCATTCTAAACTACCTTCGCTGGTTTT GAAAAAGGTTCAGTGTTTGAAACAATAAAAAGCTTTCCTTCTATTTAGCA TGATATGATGAACAGTACTGACACCTGCTTGCTGTCTCAAGAACTGAAAA GGTACGTTGCAATGTCTTCAATGGATCCAACAGCTGATTGGTTGCAAGTG ACGTATTGACTGATTTTACGCCACTTACAACCAATCAGCTGTTGGGTCCG TGATGTAATGTCAGAAGACATTGCAATGGTGCATATCACGAATTTTTTAT ATGTTTTTATCCCAATGCAATGTCGACCTGGATCTAAATCGGAAAACACT ATTATTTATTACCTTGTTACAATTCTAGAGATATTAGCATGTAGTTCTGT AGCCTGTAAATAAGTTTATGGCTGTAGATGAGGGTGACTCGAAGGCTCCC TTTTTCTTTAGCTTTCCACCCCAAGGTAGTTGGAAGGTGCCAGTTTCAAT TATGCAATTGTTTATTTTTCTTGGCAACTTTTTTCAGGGCTTTGATTGTT TTGTCACAACTGGATGAAATATCAAGTGGTGGTATAGTCAAGAACACTAT CGTCAACATCAAAAAGGTGAATTGCGAAGTTGTGTTCTTTTATTTCTTAA GCTTGTGTTCAATTGATAAACTTTGCAGGGAGTTTTTTTTTAAAGAACAT CTAAAGTTTTTGGATCCCTTCTATGTTCTAAGATTTTTTCAGGTTTAAGG TTTTAAATGTTCTTATTTTCACCATTTTGTGAGTATCTTTGTGCAATGTC CTAAGAAATTAGGTGTTTATTCAGAGTGCTTGAAGCCTTAAGATTTTAGC CATTGAAGTCTTGTATTCTCATAAAGGTTGTTCTTATGAAAAGCGTTTAT TTAGGATAAGCTTGGGGCTCAGCAATAAACTTTGGAGGGAGAACATTCAC AGTTTATTGAAGGTATATTTAATGTCGACCATGGTAGTAATAGGAAAAGG AAGAACGGAGTTAAGTGTTGAGCCCTTTTTTATAGTACCGGGTCCCGGTC TCTCGACCATAGATTAGGACTTGGCCACTTGATTTTAAGGTGTCATAAAT TGAGCGCCACAGAAGAAGTATGTAAATTATGGTGAAAACGATTGTCTACA TTTCTGCTCGTAAAAAGCTTTTAGGCTACTTGGAAGCAGTGATGACCGAG TATTCCAATGCGTGGAGGGTTAAAATTAATTACCTAAGAATCCTCGGGAT CCTCCTATCAAATTTTGACCATATTAAAGAAAGATTATCATGGTTGTTTT CTAATTTTCTCGATTTTATTTTTACCCAGAATCCATCAGAAGCTTACAAG CAAGCACAACGTAAAGAAGATAAAGAGCGTGAACTATTACGTCATCAATA CGAACAATTGAAAATCCACCACTCGGTTGTCGAATCAAGATCTTCCAAAG AATGGCTGAAAAAGCAAGGATTAAAAGGTACCGTTTTTTGAAATATATAA CCCATTGCATTTTCGAACAGTGTTCAAAGTTCTTCCATCTCAAAATTATA TAACGATACAAAGTTATTCCGTTGCAAAAGTATATAACAATACAAAATTT CAGTCTCACAATTCAGTAAACCTCTGGGAAAGTAGCAATAGGCTAAATTG GTGTGTAAATTTTAAATTCCGTCTGACATTAAAGACTATGCTTCGACCAC TGTTCGAAGAGATTTCTAAATATTTGATAATAGCACTTTGGCTACATGTG AACCAAGATGTTAACGCCTTTGACCATTTGACCATTGCTCCATACTTATA ACTTTCTCTATGTTCTTTTCATCGTTTCAGCGAAAGGTTTGACGCTCTAC CAAGTGATGGCACCAAATGCTTATTCATACGTTCAAAGTTATGTACCCTC ATTGAACAAACACGTCACTTCACAAATACATCACAAGGTTGGATAGGGGT ACTTCATTTTCACGACAGCTTGCTTTCTTTCTTTCTCGACTGTAATCGTT CATGTCGCACTCATTTTTCCCGTGTAATAATTAAGTGTAATAAGGCAGGG GATTTCCTTTGTTTTTGATAGGGGTGAATGAAAAAAACTAATTCCGGCGA ATTCTAGATTCTAGGCTCGCCAATTCCAAGCAAGCCCAGTGTATTCATTA ACGTGAATATGTACTTGAGCCGGCGAATCGAATTTTGAGACCAGCAAATT GTATTTTTTTTCGTTCCTTGCACCGGCACCGACCCCTGAATAAGGTATCG TTTCTTCAATAGAGCATGGTACAGATGGAGTGGCATGATGGGAGTTTAAA GAACGTCCACGTGGATCCCGTCATCCTTTTCAATTATCAAAACCATCTTC GAAGTGCATTGACAGTGTATCAGAAACGCGTGGAATGGTTGCAAGGTGCT AGTAGAAAATACTATGGAAACATTGTCGAAAAAAGGTGAAATAGCGTAAA TTATGGGTTCTGGTTTATGGTATATATTTGGTTCGAACTGACTGCCTCAA ATTATTATTATCTTAAGTGCGTAAAATCAGCATCCCCCCCACCGGTAAAT TGAAGTCCGTGATTGGATCTTATAGGGTACACCCCCCCCCCAGAATAGTG GGGAGNTATCTTAAGTGCGTAAAATCAGCATCCCCCCCACCGGTAAATTG AAGTCCGTGATTGGATCTTATAGGGTCCCCCCCCCCCCCAGAAGTTTGGG TACTTAAAAAAACAGAAAAAAAAATTAAAAAAAGCCAGGTACCTGGAAGT ATTCTTAAATTTAGGGGGGGTACCTGATATGTTTGGGGTACCTGCATTTT CATTAGTGGGGGTGGGGGCTGTTGTTTTTGTATGAAGTATTTTCCTTGAC TAACCCAATTTTCCAATTTTCAATCGAACCATTTCATTCAGAAGACTTTA TAAAAAGGGGGTACCTCAAAGTTGGGGGGCTCTTTTAGAATTCTAAAAAT GTTGGGGGTACCAAAATGATTGGGGGTACCTAAATTTTTTGGGGTACCCG AACCCTGGATGACCCTGAGGATCCTTCCCACTGGAAATCGACTTACACAT TGATAGCTAGACATATATGAACTATCCATTAAAGAGAATTTCTTTCCTTT TGTTTAGAGTGGTGTTCATAGTTGACCTATCCATTAACACTCAATATGGT TTGGGAGAACTTCATCTTTCATTGAAACAGCTGTTCGAAGATCAATTGAC CACTGATATGACTTTCAACATGATCTGGTAAAGTTTTAATTCAGATGGTT TGAGACATTTGACATGTGGATTTGTTCCATTGTTCTGAGCAATACCTCAA AATATTTTTTGATTAATCATTTTTCAAAGTCAAGATATTTTTAGTCACAA TTTTTTCACCTTTAGCAAGAAACGAATAGAATTTCAACGTAAGAAGCGTG TAAGAACTCATTAGAAATTTAAATAGAAAGAATAGAATAGAAATTTCAAA TTGTGATATCTCGAATTTGGAAAATATTTAGACAACAATACTTGAAGGTT TTACCCGGAGTTGGAAAATTGCTACTTATTTTATGTAGAATTCCCTACCA AAAAACTCACACGATACACTGAGATTTCAACATTTTGAGAGATGGGAAAC AGTAATCACCGTCTTTTTTCATTTTCTACGACTTAGCTAAACCTACATCA AATTTAAGTAAAAGTTATCGGACAGTTGCGAGTACAATATGAGAAATTCT GCCAATATTTCCATATTGTATCGCAAATATTTTTTGGATCGCCGATAATA CACACCTATTTGAATCTTTTTCATAGTATTGGAAAGTCACTAATGTTTTT CAATGAAGGTGGATTATTGAAAGCTACGATGGAGAATGTCGGTGCTTGTT GGAGGTCAGTTTAATGTTGTTATTGTGCTGGTTACTGATCTCTATGTACA GTGTTAAAGGTTAGACGGATTTGCATCTCAGACGGAAAATTCTTGATATT CATGACGTAATCATTAATACTAAAACACCCAAAATTCACCGGGCGTTTGC CACCAGTTTTGAATTTGAGCAATGTTACTTGTGCTGGTTACTGACCTCTA TATACAGTGTTTTTACATAATCTTCCGTCTGACACGGATTTCCGCCGCAG CGAAGTAGATGTGAAGTAGATAAGAAGCTTTTCCATCTCAAATTTATGAA TAATTCGCTAAAATGTCGAGAATTAGTGCTTATTTGCTGTGCTAAATCCA TTTTTCGTCACAGATGAAAACCTTGCCTTAGCTGCATTTAATATTTTTTT AAAGATTCTTTAAAGGTTGATTGTCAGTAAAAAATTCATTAAAATTTAAT TCCCTTATAAGGATTATGGATAAAAGAAAAACTCTCTGTCATAGGTTTTA AGCTCCTCTCAGATCGGTCACTACTTTAATCGGATTAAATTTCGCAAACG AAAAAAATCGTGAACTTTTTTGGATTAAGTTTCGTGAGTTAAAGTTTTGA AAAATTTCGCGTGGATTTAATTTCGCGAATAAGCCTGAATAAGCTTGAAA AATAATTATTTCGCGAAAATGGCAAAAATTAGCGAAATCGCGAAATTTAA TCTCGCAAAAGTTAATCAGATTAAAGTATTAATTCTTCCCGTTTTGAAAG CGAAAGATTGATCTTGAGGCTCGACTTGATAAGAAAATTTTTTGTATGAT TTCATCTTTTCTATTCCATATCATAGATGGTTTTCGAAACTATCGTGTGG CGGGACACGGAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037304XLOC_037304Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059233-exon-scaffold_320-1575043694:44495..44614TCONS_00059233-exon-scaffold_320-1575043694:44495..44614Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:44246..44345TCONS_00059233-exon-scaffold_320-1575043694:44246..44345Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:43829..43944TCONS_00059233-exon-scaffold_320-1575043694:43829..43944Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:42516..42596TCONS_00059233-exon-scaffold_320-1575043694:42516..42596Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:41974..42028TCONS_00059233-exon-scaffold_320-1575043694:41974..42028Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:40420..40521TCONS_00059233-exon-scaffold_320-1575043694:40420..40521Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:38467..38573TCONS_00059233-exon-scaffold_320-1575043694:38467..38573Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:37923..38048TCONS_00059233-exon-scaffold_320-1575043694:37923..38048Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:37297..37405TCONS_00059233-exon-scaffold_320-1575043694:37297..37405Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:36935..37000TCONS_00059233-exon-scaffold_320-1575043694:36935..37000Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:36414..36466TCONS_00059233-exon-scaffold_320-1575043694:36414..36466Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:35949..36027TCONS_00059233-exon-scaffold_320-1575043694:35949..36027Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:35088..35235TCONS_00059233-exon-scaffold_320-1575043694:35088..35235Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:34628..34734TCONS_00059233-exon-scaffold_320-1575043694:34628..34734Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:34130..34302TCONS_00059233-exon-scaffold_320-1575043694:34130..34302Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:33338..33457TCONS_00059233-exon-scaffold_320-1575043694:33338..33457Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:32711..32788TCONS_00059233-exon-scaffold_320-1575043694:32711..32788Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1575043694:31851..31888TCONS_00059233-exon-scaffold_320-1575043694:31851..31888Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:44495..44614TCONS_00059233-exon-scaffold_320-1510915933:44495..44614Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:44246..44345TCONS_00059233-exon-scaffold_320-1510915933:44246..44345Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:43829..43944TCONS_00059233-exon-scaffold_320-1510915933:43829..43944Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:42516..42596TCONS_00059233-exon-scaffold_320-1510915933:42516..42596Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:41974..42028TCONS_00059233-exon-scaffold_320-1510915933:41974..42028Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:40420..40521TCONS_00059233-exon-scaffold_320-1510915933:40420..40521Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:38467..38573TCONS_00059233-exon-scaffold_320-1510915933:38467..38573Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:37923..38048TCONS_00059233-exon-scaffold_320-1510915933:37923..38048Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:37297..37405TCONS_00059233-exon-scaffold_320-1510915933:37297..37405Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:36935..37000TCONS_00059233-exon-scaffold_320-1510915933:36935..37000Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:36414..36466TCONS_00059233-exon-scaffold_320-1510915933:36414..36466Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:35949..36027TCONS_00059233-exon-scaffold_320-1510915933:35949..36027Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:35088..35235TCONS_00059233-exon-scaffold_320-1510915933:35088..35235Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:34628..34734TCONS_00059233-exon-scaffold_320-1510915933:34628..34734Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:34130..34302TCONS_00059233-exon-scaffold_320-1510915933:34130..34302Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:33338..33457TCONS_00059233-exon-scaffold_320-1510915933:33338..33457Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:32711..32788TCONS_00059233-exon-scaffold_320-1510915933:32711..32788Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1510915933:31851..31888TCONS_00059233-exon-scaffold_320-1510915933:31851..31888Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:44495..44614TCONS_00059233-exon-scaffold_320-1491911889:44495..44614Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:44246..44345TCONS_00059233-exon-scaffold_320-1491911889:44246..44345Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:43829..43944TCONS_00059233-exon-scaffold_320-1491911889:43829..43944Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:42516..42596TCONS_00059233-exon-scaffold_320-1491911889:42516..42596Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:41974..42028TCONS_00059233-exon-scaffold_320-1491911889:41974..42028Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:40420..40521TCONS_00059233-exon-scaffold_320-1491911889:40420..40521Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:38467..38573TCONS_00059233-exon-scaffold_320-1491911889:38467..38573Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:37923..38048TCONS_00059233-exon-scaffold_320-1491911889:37923..38048Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:37297..37405TCONS_00059233-exon-scaffold_320-1491911889:37297..37405Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:36935..37000TCONS_00059233-exon-scaffold_320-1491911889:36935..37000Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:36414..36466TCONS_00059233-exon-scaffold_320-1491911889:36414..36466Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:35949..36027TCONS_00059233-exon-scaffold_320-1491911889:35949..36027Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:35088..35235TCONS_00059233-exon-scaffold_320-1491911889:35088..35235Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:34628..34734TCONS_00059233-exon-scaffold_320-1491911889:34628..34734Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:34130..34302TCONS_00059233-exon-scaffold_320-1491911889:34130..34302Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:33338..33457TCONS_00059233-exon-scaffold_320-1491911889:33338..33457Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:32711..32788TCONS_00059233-exon-scaffold_320-1491911889:32711..32788Clytia hemisphaericaexon
TCONS_00059233-exon-scaffold_320-1491911889:31851..31888TCONS_00059233-exon-scaffold_320-1491911889:31851..31888Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_320supercontigscaffold_320:31851..44614 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (10.9193 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 9.34581 6.78207 8.22398 10.9193 0.976618 0 0 1.87519 0.535939 1.05013 0.88869 0 0.0197294 0.0216056 0.0132206 1.17184e-07 0 0 0 0 4.6626 7.38622 0 0.364178 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059233 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
2004006008001000120014001600Expect = 1.49e-77 / Id = 30.41SequenceVWA3A
Match NameE-valueIdentityDescription
VWA3A1.493e-7730.41von Willebrand factor A domain-containing protein ... [more]
back to top