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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062159 ID=TCONS_00062159|Name=TCONS_00062159|organism=Clytia hemisphaerica|type=transcript|length=1708bp
TACAGACTTGGTACACACCACCAAAAGTGAAATTCTTGGACAACTTATCA
CACGATTTGTCATCCAAGATGGCTGCAAAATTGAAACTTGAATTGCCAGA
GATGCTGACCTTCCATTTATCAGAGTTCCTTGAAAAAGCTATCGAGAGCT
ACTACAAGCATAACAGTATCAAAGGATGTACGAATCcaaattcgaaagat
ttcaGTTTTCAAGCTATCTTGGATGATCATTCGTGTGGAAAACCTTACAA
TAATTTCACTTTCGGTGGCGTATATCAAACATGTCAAGTTTTAGGCTCCC
ACGATGCTGTATGCGTTGCTAATTTCCTTCAGAAGAATCCGAAAACCAAT
GATTATAGATGTCCAACCGGATATGAACCAGTAATGGTTCACAAAAGAAT
TTCACCATCAAAATGTCATCGTGTTTGCCATCGATTCTGGTTTTTCTCCT
GGGATTGTCACAATGAATGTGGTCATGCTGAATACTCTACCTTCTGGTGT
GCTGCATCAGGTCAAGTACCACCAAATTCAGGATATATATTTGGGGGTTT
GTACAACAAGTTGATGGTTAACCCTCTCACTGGTGCTGCCAATTGTCCAC
CTAAATTTTATCCACAAAATTTCGGACCTGAAAATATGTATGTTTGTATA
AGTGATGACTACGAATTAGGATCTCAATATTCAATCCCTTTTGCTGGATT
CTTTAGCTGTACTACTGGTAATCCGCTggctttgaagaaaaaaacagCAC
TTGAAAGTCAACTTCACAGTGATGGTCCGCAAAACTGGCCTAAAGCTTGT
CCACAAACTTACACGCAGCATTTAGCTGCTGTTGATGAAAACTGTGAAAT
TAATTATTGTGTCAAAGCAAATTCACTATCTGCTCATGGATTAGCGATCG
TACGAAGACCACCATTCCGTTCTTTACCAAAGATGAATAGAAACATTACA
ATCCCACTAACGCTGATCAATGATGATACTGGCAAAGTATGGTTCAAAAG
TCCAATGAACCAGAAATGGATTATGGCTACGAAAAGGACTGTCATGGAGC
ATCTTGCTGATGATATCAGCGATACTGCTACCGACAACATCAAAGGTCGT
GCGATTTACAATCTGAAATCTGCTATGGAGCGTTTAACACCTGCCGAAAA
GAAAGAGGCTCAAATCTCCAAGTCTACAGGATCAAATAAAGGTGATTCCC
AGCCAGTTTCGAATGGAACAGCTGTGGGAATCACCATTGGTGTTATTGCG
ATTCTTTTGGTCATTGTTTTGATGGTTTTTGCGAAATGTCAACGAAAGAA
AAAGCAGAAAGGGTTTACCGAGATTGGTGCAGGCGGTTCAAATGGGCCTT
TGGATTCGATGCAAACGAGCCATGACTACCAAGCGATGTGATTCTTGCAG
AATTCTCTGGAAGCCAAATATATTAAAAGTCCATGCTTattcacggaccc
aacagctgattggttgtgagtgcataaaatcagtcaatacgttaCTTGCA
CAAAAtcggtccgtggaagacattgtaatTGTACATATTGATGAATACAC
ACACATGAAATTGAGATGTCTTTTTTGTCTactatttttttaacaaaatt
tctttgcggtaaaatttttgctgaatttttcAGGATCATTACTACAAGAC
TGTAAGTTTTATGTAGCGTTCACTTACtctaaagataaaaattaaattat
aaatACCA Run BLAST on NCBI protein sequence of TCONS_00062159-protein >TCONS_00062159-protein ID=TCONS_00062159-protein|Name=TCONS_00062159-protein|organism=Clytia hemisphaerica|type=polypeptide|length=462bp
QTWYTPPKVKFLDNLSHDLSSKMAAKLKLELPEMLTFHLSEFLEKAIESY
YKHNSIKGCTNPNSKDFSFQAILDDHSCGKPYNNFTFGGVYQTCQVLGSH
DAVCVANFLQKNPKTNDYRCPTGYEPVMVHKRISPSKCHRVCHRFWFFSW
DCHNECGHAEYSTFWCAASGQVPPNSGYIFGGLYNKLMVNPLTGAANCPP
KFYPQNFGPENMYVCISDDYELGSQYSIPFAGFFSCTTGNPLALKKKTAL
ESQLHSDGPQNWPKACPQTYTQHLAAVDENCEINYCVKANSLSAHGLAIV
RRPPFRSLPKMNRNITIPLTLINDDTGKVWFKSPMNQKWIMATKRTVMEH
LADDISDTATDNIKGRAIYNLKSAMERLTPAEKKEAQISKSTGSNKGDSQ
PVSNGTAVGITIGVIAILLVIVLMVFAKCQRKKKQKGFTEIGAGGSNGPL
DSMQTSHDYQAM Run BLAST on NCBI transcript from alignment at scaffold_362:122200..129905+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062159 ID=TCONS_00062159|Name=TCONS_00062159|organism=Clytia hemisphaerica|type=transcript|length=7706bp|location=Sequence derived from alignment at scaffold_362:122200..129905+ (Clytia hemisphaerica)
TACAGACTTGGTACACACCACCAAAAGTGAAATTCTTGGACAACTTATCA
CACGATTTGTCATCCAAGATGGCTGCAAAATTGAAACTTGGTGAGTCAGG
ATTTGTACACCCTTTAACAATATTATGCTTATAATAAGCTTTGATTGAAT
CTTCAACAATAGATGAAAGTTGTATTGCCAACATATCTGGTAACTCAGGC
AGCGTTTCTGACGTTATCGCAAAATACAAAGGATCGCCTGCTTTGTCGAT
TGCAATAAGATTATCAGCTAAGCTGTCTTCCCATTGGTCAGTTGTAAAAT
TTGCTCGGTACGGTGCCCCACCGTGAGTATGTATACTGGAACCTGCTACA
TTGTTTTGATAAGCCGCCACGTTAGATTTGTTTGCTGCGTGAGAGGCAGA
CGTACTTACACCTCCGAAAGGAAACGAAGCGCTGGCTGATGCTGTGATCT
TACTTCTATCAGTATCTTGACTCTTTGCATAGCTTGATTTAACGTGAtca
attttctctaaaatagctCCAGCATCTATACTTGTAATATAATGTGTTCC
AAAATCTCTAACGATTAAATCAGCCAAGTATTGAGCTACTCTAGTGTTGT
TAGACTGTAAATGAGCTGCAATATCCAGGAGCCTTGATTTGAAGTTGGGA
TGTAATTGTATACCAGGTTGTGCTTTCACGGTATAGAATTTATGTCTTAA
TTGAACCTTAGTGGTGACAGCTTTATTCTCGACTTGGCTTTTCTTGATGT
GTTGAAATTCGGATGAGAATTTACCAGAGACTCCTATTCCAAAACCAGAA
GCATGAGCTTCAGCATTGATTGATGTAGAAGTAGATGATGTATAGTCACT
GAAATGATCGAAATATTCCGATGTTAACTCTACGCTACTTTTCTTCAAAG
CGATAACAAAAATGTTGTCAGGAAGTAGGTATTTGCCATCGTCACTGGTC
AAACATTGAGAATAATTCTTCCAAACAACCATACTCATGTCCAGGTTCCG
TAAATTATCCCATCCAGTGCCAGGAAGGACTTCCATTCTAACTAAAGTGT
TGTCTTGTAAAAAACAATTCCTCGGATCACCAATTGGAAATAGGTTTCCA
TTTCTGAAGGTAGAGGAACAACCTTTAGCTTGGCAGTGTTGTGCATTTCC
TCCANTGTTTCTTGTTTAAATCATTAGAACGGTCTTCTTTGGAACAAACC
TTCGATGCGGTTCCACTTTCCTTAAGTAAAATTGAACCATCATGCATTGC
AAAGAAAACACTTATCAAAAGTGTGAAAATTAACACTGCACTCAACTCCA
TATTTTCATAACTGTctgatttcttttgatttagaGACCTATATAACCAT
ATCCCTCTTCACCAAAAGTATGTTATTTGGATTACCTTACAGTCATAAGA
CTTTCATGTGATTTCGTTTTGTTTATCTAAGGTTCACGTAAAGGcatatt
tatattatttataCCTTATATCCTCTAACATGCTGTTTACGTACCAAATG
TTGGACTCTTTCAAGCTTACACATAACGTTATTTCAATATTCGATAGTCG
ACATCTTAGGCTTATTTTCAGGTGGCTTctgcaaaataagatatgaaatc
aaactacactgtaagagttggaaacgttcggtaaaatgcactgtaagggt
acatgccgtcgtttagaaatcgagtgcccccccggatatcaaactttgaa
aatgagtacAGAACACTTCCCTTTATATACcttggaccaagtttctcaat
cccgacCAAGAAAAATCTgtgatcagagtttttttttAGTGTTACCCTAA
ttgcggcactactcaatatcggtgtaaatgcatcgaaggcgctagatcta
ctttccctcgaaaacttttgatgatgtagcgccatTAGACGTtatttttt
aacactgcaatggcttctttacgggcaCCAGTTCAAAAGAAATTTGGATC
AAAGATGATGGataaagcttggtccagggatatataaaggtcagtgttac
AGAACAgtacagaatttaaaaaaagtgacgtcaataaTAGTCCTTGTTAA
GGAAAGCTTGAAACCAAGGAGACAATGATTATGTTAAATGACGATTCGTT
TGGTTTTTCTCAATCACATGATACATGATCTACTACTCAAAGCACTGCTG
AAAGTTGTCTGAACTTGTTTACGGTCTAACATAATGGCTATTGctttaat
ttgttttgatattcgATCACTATTTAAAAGTCCCCCTTAATAAACGAAAG
TTTTGATATCTGTAAAAGCAGGAAAAtcagttttgattttgattacaAAA
GAGAAAGTTCGGATAACTTTTTTTGCCTTTATCATGCAAGCTAATTTGCT
TATTTTTCTGCTTTTCGTGAACATATGTGCGCTTAGTAGTGGATCAGTAT
ATCTAACTGATAATAATGGAAAAGATGGAGGAAATGCACAACACTGCCAA
GCTAAAGGTTGTTCCTCTACCTTCAGAAATGGAAACCTATTTCCAATTGG
TGATCCGAGGAATTGTTTTTTACAAGACAACACTTTAGTTAGAATGGAAG
TCCTTCCTGGCACTGGATGGGATAATTTACGGAATCTAGACATGGGTATG
GTCGTTTGGAAGAATTATTCTCAATGTTTGACCAGTGAGGATGGCAAATA
TCTTATCCCTGATGATACCTTTGTCGTTGCTTTGAAAGAAAGTAATGTTG
AATTGACATCGGAATATTTTGATCATTGGAATAATTACACTTCGACAACC
TCAACAAGTGTCAATGCTGAAGCCCATGCTTCTATCTTTGGTGCAGGCCT
CGGTGGTAAATTTTCCTCAGAATATCAATCAGTCAAGAAAAGCCAGTATG
AAGATAAAGCCGTTACAACCAGGGTTCAGCTAAGACATAAATTCTACACA
GTTCGCTCACAACCTGATATGCAATTACATCCAAACTTCAAATCAAGGCT
CCTGGATATTTCAGCTCATTTACAGTCTAACAACACCAAAGTAGCTCAAT
ACTTGGCTGATTTAATTGTAAGAGATTATGGAACACATTATATTACAAGG
ATAGATGCTGGAGCTATTTTAGCTAAAATTGATCATGTTAAATCAAGCTA
CGCAAAAAAAGATGATATGGATAAAAGCAAGATAACAGCTTCGGCAAGCG
CCTCATTCCCGTTTGGTGGTGCCAGCGTATCTACAACTCATACAGCCAGT
AAAGAAGACATAGATCTCTACCAAAAGAATATTgcagcttcaaaaatcaa
aacctaCGGTGGCCCACCTTATCGAGCAAATTTTACCACTGATCAATGGG
AGGATGGGCTGTTGAACAATTTGGTAGCCATTGACCGATCTGGGGATCCG
TTACATTTTACAATCACTCCTCAATCTTTACCAGAATTGCCAGAGATGCT
GACCTTCCATTTATCAGAGTTCCTTGAAAAAGCTATCGAGAGCTACTACA
AGCATAACAGTATCAAAGGATGTACGAATCcaaattcgaaagatttcaGT
TTTCAAGCTATCTTGGATGATCATTCGTGTGGAAAACCTTACAATAATTT
CACTTTCGGTGGCGTATATCAAACATGTCAAGTTTTAGGTAAGTTGCATC
TTTTCCTCAATTTTATATGTAGTGCTGAAATATAATTTCCAACAAAGAAC
TATTATTCACTTAAAAGATTCgcagaatttttctgtttcGTCTTCTTTCT
TGTGGGCTGTCCCCCGGTGGTCTTCTAAGTGGCCAGCGTTATCCTGACCA
TTAATGGTGACAAGCCATATATCCATATTTTAATCTAATTCATGCTTACT
CTTTCAAACATTTTAATAGGATAAGGGGGTTGATGCTCCCTTGTTAAGAG
TTATGATACAACCATATCATATAACCGATGTGACCCTTTACACACTATCC
CACACGCTACACTTGCGTCTCGTCTCCTCTGGGAAGGGCATAGGCTAGTC
TAGGAAGGGCGCCAATACTTcccccaagcggttttcgtgatgacgtGATG
ATAGGGACATTTTtgcagcgtgattacgtgatttgaaattttttttcttc
gtgattgcgtgatgagaGGTCATAACGTGAtcatgatttgaaagattttt
gaactGTGATACGTGACTCTTTTAAAGGGATGCGTGAtcagccatttttt
tttttttgctgatttgcgtgatcgtgattgaagacaaaaatggCGTGCTG
TTCACGATGAACAGAGTTACCGCTGGGGAGCCTCCTTTATCTTGTGTCTC
AAGACAAAAATATCAACTGAAATTCTTCTGTATTTTCTCTTTCAAACAGG
CTCCCACGATGCTGTATGCGTTGCTAATTTCCTTCAGAAGAATCCGAAAA
CCAATGATTATAGATGTCCAACCGGATATGAACCAGTAATGGTTCACAAA
AGAATTTCACCATCAAAATGTCATCGTGTTTGCCATCGATTCTGGTTTTT
CTCCTGGGATTGTCACAATGAATGTGGTCATGCTGAATACTCTACCTTCT
GGTGTGCTGCATCAGGTCAGTTGTTacaccatagatttataaagaccgaa
gggctagatgtcttgctttggctgaaaagtgtgccaaggttaggtaggaa
atcctacccaggtcacgtgacattacaatagaatttcagcacttGACGAA
TAAGAAGCTTAgcgggttttcaaaaacaatggcagcaatattttttgcga
tcctcacttttttttgcttgggagagcttaaaatacgaCATCTAGCCTTT
CAGGCTTTACAGGAAAATCTGGTCAAAATAGTCTAGTGTTGAAAATAACA
GGAGAGTTGAGTCCCTGATAGGAAAAAATACTGTAGATTTGAGGATCTCC
ATCGAGTCTTTTGAGAATTGAGCGAAAATTCGAGGTTTCGATTCGTGATG
AattattgagacaggggtgttcaatGTTGAAAGTACCAGCTCAAAGACAG
TTACAATATCGGTCAAAACTGTTACCAAGGATAAAAAGTCAATCATTCTA
CATACGAATTTTACAGCCGCACTATGTATCTCAATTTAGAAAGAGCTCTC
TTTTCACCTTTTAACCTATCCTTGATAACCTCTTTTAAAAGTTACACTAT
ATAAACTGTACTTAACTTTTCAGGTCAAGTACCACCAAATTCAGGATATA
TATTTGGGGGTTTGTACAACAAGTTGATGGTTAACCCTCTCACTGGTGCT
GCCAATTGTCCACCTAAATTTTATCCACAAAATTTCGGACCTGAAAATAT
GTAAGGATTTAAGGAATCTTTTTAAGTTAGGTGGTCTGACTCTCTCACCA
AGAGTATAGCAGAACAAATCCAGAAACAGATTCTCTGGCTAGCTTGTTTG
CTAGAATTTTATCTGGTTTTATAGCTTGATAGTATAAATGTAACACAATG
TCCTGTTAGCGAGGGCTGTACTGTCCCATGCAATGAAAATATTGCTcaag
gtcaagtaacgaccgagcttgcgaacCAGTTACCAGTGGCCTAAGTCAGt
aagaaatttaataaaatgtCAACAATATTtactacacccctgtgtcacag
actcgTTGGGAcaccagccccactggaaaattcggCGATAATCGGAAAAT
ATTGTCCTCGGTGGGAAAATactctggaatttcagccctgggaaattgac
tttaactTATCCACATTTGATATTCAATATTGAAAAATTtgtacttcaaa
accatccccactggaatttttaaccttggaacaatagaatttctatcccc
attgggatttcaataggaatctTTATttccactgaggaaaaaagttccac
cgggcctatgagacaggggtgtttcacTATATTTGCCTAGTTTAACAATC
TTTCTTTTACATTTCGTAGGTATGTTTGTATAAGTGATGACTACGAATTA
GGATCTCAATATTCAATCCCTTTTGCTGGATTCTTTAGCTGTACTACTGG
TAATCCGCTggctttgaagaaaaaaacaggTATACAAGTTTGATCATTAC
TTTATATTCCGCAAATATTATTAGGCAAGTATTTAATGGCTTTGAAATTT
GCACGCTGAAATTAACAcgatttttctgcttttttaaggaaacagcggct
ggttttaattaagggggtttttattaatacgaattttttcaattctatAG
ATCTAATTATAGATTTGTTGTTTTTACACCCGATTCTTGGGGCCAATTTT
GATGGTCGTTGAGAATCGTTTTGCTACATCCTATATAAATAGCAAATCGT
CATGGGGACGAAGTTGGCATACCACCTTACTCTACGTGAGAAAATAAACA
TGCTAATTTTGTTGACATTATTTTAGCACTTGAAAGTCAACTTCACAGTG
ATGGTCCGCAAAACTGGCCTAAAGCTTGTCCACAAACTTACACGCAGCAT
TTAGCTGCTGTTGATGAAAACTGTGAAATTAATTATTGTGTCAAAGCAAA
TTCACTATCTGCTCATGGATTAGCGATCGTACGAAGACCACCATTCCGTT
CTTTACCAAAGATGAATAGAAACATTACAATCCCACTAACGCTGATCAAT
GATGATACTGGCAAAGTATGGTTCAAAAGTCCAATGAACCAGAAATGGAT
TATGGCTACGAAAAGGTAATAAAACTTATTACTAGTCCCTTAGTTCGTTC
TATACGATTCTGATAGCGTTTATGATTATAGCCCTAAACCATGACATTTA
AAATGTGAGTTGCACTCTTGGTATGGCAAAGTATAACAACCCAACAAACA
TTTTTattctacacttttttttaacttCGTTCCTTTGTTTACGCTCTTTT
TataataagaaccagtaaatttttgatgaggctCGCATGTCTTTAtcttt
ttggcactttgagcctcaaattattcttatcctgttcttatttatattaT
ATAATTTTCACTACTTTGAAAACCCTTAATCTCTTGAAATCGAGTAATTC
AATTCCGATTTTAAGCTTAATTGTTCGCATAAAAATGAGTATTTGCATGA
TTATGAAATTCTTCACTGCTTTCTTCTTCAATAGGACTGTCATGGAGCAT
CTTGCTGATGATATCAGCGATACTGCTACCGACAACATCAAAGGTCGTGC
GATTTACAATCTGAAATCTGCTATGGAGCGTTTAACACCTGCCGAAAAGA
AAGAGGCTCAAATCTCCAAGTCTACAGGATCAAATAAAGGTGATTCCCAG
CCAGTTTCGAATGGAACAGCTGTGGGAATCACCATTGGTGTTATTGCGAT
TCTTTTGGTCATTGTTTTGATGGTTTTTGCGAAATGTCAACGAAAGAAAA
AGCAGAAAGGGTTTACCGAGATTGGTGCAGGCGGTTCAAATGGGCCTTTG
GATTCGATGCAAACGAGCCATGACTACCAAGCGATGTGATTCTTGCAGAA
TTCTCTGGAAGCCAAATATATTAAAAGTCCATGCTTattcacggacccaa
cagctgattggttgtgagtgcataaaatcagtcaatacgttaCTTGCACA
AAAtcggtccgtggaagacattgtaatTGTACATATTGATGAATACACAC
ACATGAAATTGAGATGTCTTTTTTGTCTactatttttttaacaaaatttc
tttgcggtaaaatttttgctgaatttttcAGGATCATTACTACAAGACTG
TAAGTTTTATGTAGCGTTCACTTACtctaaagataaaaattaaattataa
atACCA Coding sequence (CDS) from alignment at scaffold_362:122200..129905+ >TCONS_00062159 ID=TCONS_00062159|Name=TCONS_00062159|organism=Clytia hemisphaerica|type=CDS|length=9723bp|location=Sequence derived from alignment at scaffold_362:122200..129905+ (Clytia hemisphaerica)
CAGACTTGGTACACACCACCAAAAGTGAAATTCTTGGACAACTTATCACA
CGATTTGTCATCCAAGATGGCTGCAAAATTGAAACTTGAATTGCCAGAGA
TGCTGACCTTCCATTTATCAGAGTTCCTTGAAAAAGCTATCGAGAGCTAC
TACAAGCATAACAGTATCAAAGGATGTACGAATCcaaattcgaaagattt
caGTTTTCAAGCTATCTTGGATGATCATTCGTGTGGAAAACCTTACAATA
ATTTCACTTTCGGTGGCGTATATCAAACATGTCAAGTTTTAGGCTCCCAC
GATGCTGTATGCGTTGCTAATTTCCTTCAGAAGAATCCGAAAACCAATGA
TTATAGATGTCCAACCGGATATGAACCAGTAATGGTTCACAAAAGAATTT
CACCATCAAAATGTCATCGTGTTTGCCATCGATTCTGGTTTTTCTCCTGG
GATTGTCACAATGAATGTGGTCATGCTGAATACTCTACCTTCTGGTGTGC
TGCATCAGGTCAAGTACCACCAAATTCAGGATATATATTTGGGGGTTTGT
ACAACAAGTTGATGGTTAACCCTCTCACTGGTGCTGCCAATTGTCCACCT
AAATTTTATCCACAAAATTTCGGACCTGAAAATATGTATGTTTGTATAAG
TGATGACTACGAATTAGGATCTCAATATTCAATCCCTTTTGCTGGATTCT
TTAGCTGTACTACTGGTAATCCGCTggctttgaagaaaaaaacagCACTT
GAAAGTCAACTTCACAGTGATGGTCCGCAAAACTGGCCTAAAGCTTGTCC
ACAAACTTACACGCAGCATTTAGCTGCTGTTGATGAAAACTGTGAAATTA
ATTATTGTGTCAAAGCAAATTCACTATCTGCTCATGGATTAGCGATCGTA
CGAAGACCACCATTCCGTTCTTTACCAAAGATGAATAGAAACATTACAAT
CCCACTAACGCTGATCAATGATGATACTGGCAAAGTATGGTTCAAAAGTC
CAATGAACCAGAAATGGATTATGGCTACGAAAAGGACTGTCATGGAGCAT
CTTGCTGATGATATCAGCGATACTGCTACCGACAACATCAAAGGTCGTGC
GATTTACAATCTGAAATCTGCTATGGAGCGTTTAACACCTGCCGAAAAGA
AAGAGGCTCAAATCTCCAAGTCTACAGGATCAAATAAAGGTGATTCCCAG
CCAGTTTCGAATGGAACAGCTGTGGGAATCACCATTGGTGTTATTGCGAT
TCTTTTGGTCATTGTTTTGATGGTTTTTGCGAAATGTCAACGAAAGAAAA
AGCAGAAAGGGTTTACCGAGATTGGTGCAGGCGGTTCAAATGGGCCTTTG
GATTCGATGCAAACGAGCCATGACTACCAAGCGATGTGACAGACTTGGTA
CACACCACCAAAAGTGAAATTCTTGGACAACTTATCACACGATTTGTCAT
CCAAGATGGCTGCAAAATTGAAACTTGAATTGCCAGAGATGCTGACCTTC
CATTTATCAGAGTTCCTTGAAAAAGCTATCGAGAGCTACTACAAGCATAA
CAGTATCAAAGGATGTACGAATCcaaattcgaaagatttcaGTTTTCAAG
CTATCTTGGATGATCATTCGTGTGGAAAACCTTACAATAATTTCACTTTC
GGTGGCGTATATCAAACATGTCAAGTTTTAGGCTCCCACGATGCTGTATG
CGTTGCTAATTTCCTTCAGAAGAATCCGAAAACCAATGATTATAGATGTC
CAACCGGATATGAACCAGTAATGGTTCACAAAAGAATTTCACCATCAAAA
TGTCATCGTGTTTGCCATCGATTCTGGTTTTTCTCCTGGGATTGTCACAA
TGAATGTGGTCATGCTGAATACTCTACCTTCTGGTGTGCTGCATCAGGTC
AAGTACCACCAAATTCAGGATATATATTTGGGGGTTTGTACAACAAGTTG
ATGGTTAACCCTCTCACTGGTGCTGCCAATTGTCCACCTAAATTTTATCC
ACAAAATTTCGGACCTGAAAATATGTATGTTTGTATAAGTGATGACTACG
AATTAGGATCTCAATATTCAATCCCTTTTGCTGGATTCTTTAGCTGTACT
ACTGGTAATCCGCTggctttgaagaaaaaaacagCACTTGAAAGTCAACT
TCACAGTGATGGTCCGCAAAACTGGCCTAAAGCTTGTCCACAAACTTACA
CGCAGCATTTAGCTGCTGTTGATGAAAACTGTGAAATTAATTATTGTGTC
AAAGCAAATTCACTATCTGCTCATGGATTAGCGATCGTACGAAGACCACC
ATTCCGTTCTTTACCAAAGATGAATAGAAACATTACAATCCCACTAACGC
TGATCAATGATGATACTGGCAAAGTATGGTTCAAAAGTCCAATGAACCAG
AAATGGATTATGGCTACGAAAAGGACTGTCATGGAGCATCTTGCTGATGA
TATCAGCGATACTGCTACCGACAACATCAAAGGTCGTGCGATTTACAATC
TGAAATCTGCTATGGAGCGTTTAACACCTGCCGAAAAGAAAGAGGCTCAA
ATCTCCAAGTCTACAGGATCAAATAAAGGTGATTCCCAGCCAGTTTCGAA
TGGAACAGCTGTGGGAATCACCATTGGTGTTATTGCGATTCTTTTGGTCA
TTGTTTTGATGGTTTTTGCGAAATGTCAACGAAAGAAAAAGCAGAAAGGG
TTTACCGAGATTGGTGCAGGCGGTTCAAATGGGCCTTTGGATTCGATGCA
AACGAGCCATGACTACCAAGCGATGTGACAGACTTGGTACACACCACCAA
AAGTGAAATTCTTGGACAACTTATCACACGATTTGTCATCCAAGATGGCT
GCAAAATTGAAACTTGAATTGCCAGAGATGCTGACCTTCCATTTATCAGA
GTTCCTTGAAAAAGCTATCGAGAGCTACTACAAGCATAACAGTATCAAAG
GATGTACGAATCcaaattcgaaagatttcaGTTTTCAAGCTATCTTGGAT
GATCATTCGTGTGGAAAACCTTACAATAATTTCACTTTCGGTGGCGTATA
TCAAACATGTCAAGTTTTAGGCTCCCACGATGCTGTATGCGTTGCTAATT
TCCTTCAGAAGAATCCGAAAACCAATGATTATAGATGTCCAACCGGATAT
GAACCAGTAATGGTTCACAAAAGAATTTCACCATCAAAATGTCATCGTGT
TTGCCATCGATTCTGGTTTTTCTCCTGGGATTGTCACAATGAATGTGGTC
ATGCTGAATACTCTACCTTCTGGTGTGCTGCATCAGGTCAAGTACCACCA
AATTCAGGATATATATTTGGGGGTTTGTACAACAAGTTGATGGTTAACCC
TCTCACTGGTGCTGCCAATTGTCCACCTAAATTTTATCCACAAAATTTCG
GACCTGAAAATATGTATGTTTGTATAAGTGATGACTACGAATTAGGATCT
CAATATTCAATCCCTTTTGCTGGATTCTTTAGCTGTACTACTGGTAATCC
GCTggctttgaagaaaaaaacagCACTTGAAAGTCAACTTCACAGTGATG
GTCCGCAAAACTGGCCTAAAGCTTGTCCACAAACTTACACGCAGCATTTA
GCTGCTGTTGATGAAAACTGTGAAATTAATTATTGTGTCAAAGCAAATTC
ACTATCTGCTCATGGATTAGCGATCGTACGAAGACCACCATTCCGTTCTT
TACCAAAGATGAATAGAAACATTACAATCCCACTAACGCTGATCAATGAT
GATACTGGCAAAGTATGGTTCAAAAGTCCAATGAACCAGAAATGGATTAT
GGCTACGAAAAGGACTGTCATGGAGCATCTTGCTGATGATATCAGCGATA
CTGCTACCGACAACATCAAAGGTCGTGCGATTTACAATCTGAAATCTGCT
ATGGAGCGTTTAACACCTGCCGAAAAGAAAGAGGCTCAAATCTCCAAGTC
TACAGGATCAAATAAAGGTGATTCCCAGCCAGTTTCGAATGGAACAGCTG
TGGGAATCACCATTGGTGTTATTGCGATTCTTTTGGTCATTGTTTTGATG
GTTTTTGCGAAATGTCAACGAAAGAAAAAGCAGAAAGGGTTTACCGAGAT
TGGTGCAGGCGGTTCAAATGGGCCTTTGGATTCGATGCAAACGAGCCATG
ACTACCAAGCGATGTGACAGACTTGGTACACACCACCAAAAGTGAAATTC
TTGGACAACTTATCACACGATTTGTCATCCAAGATGGCTGCAAAATTGAA
ACTTGAATTGCCAGAGATGCTGACCTTCCATTTATCAGAGTTCCTTGAAA
AAGCTATCGAGAGCTACTACAAGCATAACAGTATCAAAGGATGTACGAAT
CcaaattcgaaagatttcaGTTTTCAAGCTATCTTGGATGATCATTCGTG
TGGAAAACCTTACAATAATTTCACTTTCGGTGGCGTATATCAAACATGTC
AAGTTTTAGGCTCCCACGATGCTGTATGCGTTGCTAATTTCCTTCAGAAG
AATCCGAAAACCAATGATTATAGATGTCCAACCGGATATGAACCAGTAAT
GGTTCACAAAAGAATTTCACCATCAAAATGTCATCGTGTTTGCCATCGAT
TCTGGTTTTTCTCCTGGGATTGTCACAATGAATGTGGTCATGCTGAATAC
TCTACCTTCTGGTGTGCTGCATCAGGTCAAGTACCACCAAATTCAGGATA
TATATTTGGGGGTTTGTACAACAAGTTGATGGTTAACCCTCTCACTGGTG
CTGCCAATTGTCCACCTAAATTTTATCCACAAAATTTCGGACCTGAAAAT
ATGTATGTTTGTATAAGTGATGACTACGAATTAGGATCTCAATATTCAAT
CCCTTTTGCTGGATTCTTTAGCTGTACTACTGGTAATCCGCTggctttga
agaaaaaaacagCACTTGAAAGTCAACTTCACAGTGATGGTCCGCAAAAC
TGGCCTAAAGCTTGTCCACAAACTTACACGCAGCATTTAGCTGCTGTTGA
TGAAAACTGTGAAATTAATTATTGTGTCAAAGCAAATTCACTATCTGCTC
ATGGATTAGCGATCGTACGAAGACCACCATTCCGTTCTTTACCAAAGATG
AATAGAAACATTACAATCCCACTAACGCTGATCAATGATGATACTGGCAA
AGTATGGTTCAAAAGTCCAATGAACCAGAAATGGATTATGGCTACGAAAA
GGACTGTCATGGAGCATCTTGCTGATGATATCAGCGATACTGCTACCGAC
AACATCAAAGGTCGTGCGATTTACAATCTGAAATCTGCTATGGAGCGTTT
AACACCTGCCGAAAAGAAAGAGGCTCAAATCTCCAAGTCTACAGGATCAA
ATAAAGGTGATTCCCAGCCAGTTTCGAATGGAACAGCTGTGGGAATCACC
ATTGGTGTTATTGCGATTCTTTTGGTCATTGTTTTGATGGTTTTTGCGAA
ATGTCAACGAAAGAAAAAGCAGAAAGGGTTTACCGAGATTGGTGCAGGCG
GTTCAAATGGGCCTTTGGATTCGATGCAAACGAGCCATGACTACCAAGCG
ATGTGACAGACTTGGTACACACCACCAAAAGTGAAATTCTTGGACAACTT
ATCACACGATTTGTCATCCAAGATGGCTGCAAAATTGAAACTTGAATTGC
CAGAGATGCTGACCTTCCATTTATCAGAGTTCCTTGAAAAAGCTATCGAG
AGCTACTACAAGCATAACAGTATCAAAGGATGTACGAATCcaaattcgaa
agatttcaGTTTTCAAGCTATCTTGGATGATCATTCGTGTGGAAAACCTT
ACAATAATTTCACTTTCGGTGGCGTATATCAAACATGTCAAGTTTTAGGC
TCCCACGATGCTGTATGCGTTGCTAATTTCCTTCAGAAGAATCCGAAAAC
CAATGATTATAGATGTCCAACCGGATATGAACCAGTAATGGTTCACAAAA
GAATTTCACCATCAAAATGTCATCGTGTTTGCCATCGATTCTGGTTTTTC
TCCTGGGATTGTCACAATGAATGTGGTCATGCTGAATACTCTACCTTCTG
GTGTGCTGCATCAGGTCAAGTACCACCAAATTCAGGATATATATTTGGGG
GTTTGTACAACAAGTTGATGGTTAACCCTCTCACTGGTGCTGCCAATTGT
CCACCTAAATTTTATCCACAAAATTTCGGACCTGAAAATATGTATGTTTG
TATAAGTGATGACTACGAATTAGGATCTCAATATTCAATCCCTTTTGCTG
GATTCTTTAGCTGTACTACTGGTAATCCGCTggctttgaagaaaaaaaca
gCACTTGAAAGTCAACTTCACAGTGATGGTCCGCAAAACTGGCCTAAAGC
TTGTCCACAAACTTACACGCAGCATTTAGCTGCTGTTGATGAAAACTGTG
AAATTAATTATTGTGTCAAAGCAAATTCACTATCTGCTCATGGATTAGCG
ATCGTACGAAGACCACCATTCCGTTCTTTACCAAAGATGAATAGAAACAT
TACAATCCCACTAACGCTGATCAATGATGATACTGGCAAAGTATGGTTCA
AAAGTCCAATGAACCAGAAATGGATTATGGCTACGAAAAGGACTGTCATG
GAGCATCTTGCTGATGATATCAGCGATACTGCTACCGACAACATCAAAGG
TCGTGCGATTTACAATCTGAAATCTGCTATGGAGCGTTTAACACCTGCCG
AAAAGAAAGAGGCTCAAATCTCCAAGTCTACAGGATCAAATAAAGGTGAT
TCCCAGCCAGTTTCGAATGGAACAGCTGTGGGAATCACCATTGGTGTTAT
TGCGATTCTTTTGGTCATTGTTTTGATGGTTTTTGCGAAATGTCAACGAA
AGAAAAAGCAGAAAGGGTTTACCGAGATTGGTGCAGGCGGTTCAAATGGG
CCTTTGGATTCGATGCAAACGAGCCATGACTACCAAGCGATGTGACAGAC
TTGGTACACACCACCAAAAGTGAAATTCTTGGACAACTTATCACACGATT
TGTCATCCAAGATGGCTGCAAAATTGAAACTTGAATTGCCAGAGATGCTG
ACCTTCCATTTATCAGAGTTCCTTGAAAAAGCTATCGAGAGCTACTACAA
GCATAACAGTATCAAAGGATGTACGAATCcaaattcgaaagatttcaGTT
TTCAAGCTATCTTGGATGATCATTCGTGTGGAAAACCTTACAATAATTTC
ACTTTCGGTGGCGTATATCAAACATGTCAAGTTTTAGGCTCCCACGATGC
TGTATGCGTTGCTAATTTCCTTCAGAAGAATCCGAAAACCAATGATTATA
GATGTCCAACCGGATATGAACCAGTAATGGTTCACAAAAGAATTTCACCA
TCAAAATGTCATCGTGTTTGCCATCGATTCTGGTTTTTCTCCTGGGATTG
TCACAATGAATGTGGTCATGCTGAATACTCTACCTTCTGGTGTGCTGCAT
CAGGTCAAGTACCACCAAATTCAGGATATATATTTGGGGGTTTGTACAAC
AAGTTGATGGTTAACCCTCTCACTGGTGCTGCCAATTGTCCACCTAAATT
TTATCCACAAAATTTCGGACCTGAAAATATGTATGTTTGTATAAGTGATG
ACTACGAATTAGGATCTCAATATTCAATCCCTTTTGCTGGATTCTTTAGC
TGTACTACTGGTAATCCGCTggctttgaagaaaaaaacagCACTTGAAAG
TCAACTTCACAGTGATGGTCCGCAAAACTGGCCTAAAGCTTGTCCACAAA
CTTACACGCAGCATTTAGCTGCTGTTGATGAAAACTGTGAAATTAATTAT
TGTGTCAAAGCAAATTCACTATCTGCTCATGGATTAGCGATCGTACGAAG
ACCACCATTCCGTTCTTTACCAAAGATGAATAGAAACATTACAATCCCAC
TAACGCTGATCAATGATGATACTGGCAAAGTATGGTTCAAAAGTCCAATG
AACCAGAAATGGATTATGGCTACGAAAAGGACTGTCATGGAGCATCTTGC
TGATGATATCAGCGATACTGCTACCGACAACATCAAAGGTCGTGCGATTT
ACAATCTGAAATCTGCTATGGAGCGTTTAACACCTGCCGAAAAGAAAGAG
GCTCAAATCTCCAAGTCTACAGGATCAAATAAAGGTGATTCCCAGCCAGT
TTCGAATGGAACAGCTGTGGGAATCACCATTGGTGTTATTGCGATTCTTT
TGGTCATTGTTTTGATGGTTTTTGCGAAATGTCAACGAAAGAAAAAGCAG
AAAGGGTTTACCGAGATTGGTGCAGGCGGTTCAAATGGGCCTTTGGATTC
GATGCAAACGAGCCATGACTACCAAGCGATGTGACAGACTTGGTACACAC
CACCAAAAGTGAAATTCTTGGACAACTTATCACACGATTTGTCATCCAAG
ATGGCTGCAAAATTGAAACTTGAATTGCCAGAGATGCTGACCTTCCATTT
ATCAGAGTTCCTTGAAAAAGCTATCGAGAGCTACTACAAGCATAACAGTA
TCAAAGGATGTACGAATCcaaattcgaaagatttcaGTTTTCAAGCTATC
TTGGATGATCATTCGTGTGGAAAACCTTACAATAATTTCACTTTCGGTGG
CGTATATCAAACATGTCAAGTTTTAGGCTCCCACGATGCTGTATGCGTTG
CTAATTTCCTTCAGAAGAATCCGAAAACCAATGATTATAGATGTCCAACC
GGATATGAACCAGTAATGGTTCACAAAAGAATTTCACCATCAAAATGTCA
TCGTGTTTGCCATCGATTCTGGTTTTTCTCCTGGGATTGTCACAATGAAT
GTGGTCATGCTGAATACTCTACCTTCTGGTGTGCTGCATCAGGTCAAGTA
CCACCAAATTCAGGATATATATTTGGGGGTTTGTACAACAAGTTGATGGT
TAACCCTCTCACTGGTGCTGCCAATTGTCCACCTAAATTTTATCCACAAA
ATTTCGGACCTGAAAATATGTATGTTTGTATAAGTGATGACTACGAATTA
GGATCTCAATATTCAATCCCTTTTGCTGGATTCTTTAGCTGTACTACTGG
TAATCCGCTggctttgaagaaaaaaacagCACTTGAAAGTCAACTTCACA
GTGATGGTCCGCAAAACTGGCCTAAAGCTTGTCCACAAACTTACACGCAG
CATTTAGCTGCTGTTGATGAAAACTGTGAAATTAATTATTGTGTCAAAGC
AAATTCACTATCTGCTCATGGATTAGCGATCGTACGAAGACCACCATTCC
GTTCTTTACCAAAGATGAATAGAAACATTACAATCCCACTAACGCTGATC
AATGATGATACTGGCAAAGTATGGTTCAAAAGTCCAATGAACCAGAAATG
GATTATGGCTACGAAAAGGACTGTCATGGAGCATCTTGCTGATGATATCA
GCGATACTGCTACCGACAACATCAAAGGTCGTGCGATTTACAATCTGAAA
TCTGCTATGGAGCGTTTAACACCTGCCGAAAAGAAAGAGGCTCAAATCTC
CAAGTCTACAGGATCAAATAAAGGTGATTCCCAGCCAGTTTCGAATGGAA
CAGCTGTGGGAATCACCATTGGTGTTATTGCGATTCTTTTGGTCATTGTT
TTGATGGTTTTTGCGAAATGTCAACGAAAGAAAAAGCAGAAAGGGTTTAC
CGAGATTGGTGCAGGCGGTTCAAATGGGCCTTTGGATTCGATGCAAACGA
GCCATGACTACCAAGCGATGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062159-exon-scaffold_362-1491911889:122200..122289 | TCONS_00062159-exon-scaffold_362-1491911889:122200..122289 | Clytia hemisphaerica | exon |
| TCONS_00062159-exon-scaffold_362-1510915933:122200..122289 | TCONS_00062159-exon-scaffold_362-1510915933:122200..122289 | Clytia hemisphaerica | exon |
| TCONS_00062159-exon-scaffold_362-1575043694:122200..122289 | TCONS_00062159-exon-scaffold_362-1575043694:122200..122289 | Clytia hemisphaerica | exon |
| TCONS_00062159-exon-scaffold_362-1491911889:125584..125787 | TCONS_00062159-exon-scaffold_362-1491911889:125584..125787 | Clytia hemisphaerica | exon |
| TCONS_00062159-exon-scaffold_362-1510915933:125584..125787 | TCONS_00062159-exon-scaffold_362-1510915933:125584..125787 | Clytia hemisphaerica | exon |
| TCONS_00062159-exon-scaffold_362-1575043694:125584..125787 | TCONS_00062159-exon-scaffold_362-1575043694:125584..125787 | Clytia hemisphaerica | exon |
| TCONS_00062159-exon-scaffold_362-1491911889:126499..126714 | TCONS_00062159-exon-scaffold_362-1491911889:126499..126714 | Clytia hemisphaerica | exon |
| TCONS_00062159-exon-scaffold_362-1510915933:126499..126714 | TCONS_00062159-exon-scaffold_362-1510915933:126499..126714 | Clytia hemisphaerica | exon |
| TCONS_00062159-exon-scaffold_362-1575043694:126499..126714 | TCONS_00062159-exon-scaffold_362-1575043694:126499..126714 | Clytia hemisphaerica | exon |
| TCONS_00062159-exon-scaffold_362-1491911889:127323..127449 | TCONS_00062159-exon-scaffold_362-1491911889:127323..127449 | Clytia hemisphaerica | exon |
| TCONS_00062159-exon-scaffold_362-1510915933:127323..127449 | TCONS_00062159-exon-scaffold_362-1510915933:127323..127449 | Clytia hemisphaerica | exon |
| TCONS_00062159-exon-scaffold_362-1575043694:127323..127449 | TCONS_00062159-exon-scaffold_362-1575043694:127323..127449 | Clytia hemisphaerica | exon |
| TCONS_00062159-exon-scaffold_362-1491911889:128069..128178 | TCONS_00062159-exon-scaffold_362-1491911889:128069..128178 | Clytia hemisphaerica | exon |
| TCONS_00062159-exon-scaffold_362-1510915933:128069..128178 | TCONS_00062159-exon-scaffold_362-1510915933:128069..128178 | Clytia hemisphaerica | exon |
| TCONS_00062159-exon-scaffold_362-1575043694:128069..128178 | TCONS_00062159-exon-scaffold_362-1575043694:128069..128178 | Clytia hemisphaerica | exon |
| TCONS_00062159-exon-scaffold_362-1491911889:128526..128814 | TCONS_00062159-exon-scaffold_362-1491911889:128526..128814 | Clytia hemisphaerica | exon |
| TCONS_00062159-exon-scaffold_362-1510915933:128526..128814 | TCONS_00062159-exon-scaffold_362-1510915933:128526..128814 | Clytia hemisphaerica | exon |
| TCONS_00062159-exon-scaffold_362-1575043694:128526..128814 | TCONS_00062159-exon-scaffold_362-1575043694:128526..128814 | Clytia hemisphaerica | exon |
| TCONS_00062159-exon-scaffold_362-1491911889:129234..129905 | TCONS_00062159-exon-scaffold_362-1491911889:129234..129905 | Clytia hemisphaerica | exon |
| TCONS_00062159-exon-scaffold_362-1510915933:129234..129905 | TCONS_00062159-exon-scaffold_362-1510915933:129234..129905 | Clytia hemisphaerica | exon |
| TCONS_00062159-exon-scaffold_362-1575043694:129234..129905 | TCONS_00062159-exon-scaffold_362-1575043694:129234..129905 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_362 | supercontig | scaffold_362:122200..129905 + |
Blast
BLAST of TCONS_00062159 vs. Swiss-Prot (Human)
Match: MPEG1 (Macrophage-expressed gene 1 protein OS=Homo sapiens GN=MPEG1 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 4.589e-72 Identity = 124/321 (38.63%), Postives = 180/321 (56.07%), Query Frame = 3
Query: 90 ELPEMLTFHLSEFLEKAIESYYKHNSIKGCTNPNSKDFSFQAILDDHSCGKPYNNFTFGGVYQTC-QVLGSHDAVCVANFLQKNPKTNDYRCPTGYEPVMVHKRISPS-----KCHRVCHRFWFFSWDCHN--ECGHAEYSTFWCAASGQVPPNSGYIFGGLYNKLMVNPLTGAANCPPKFYPQNFGPENMYVCISDDYELGSQYSIPFAGFFSCTTGNPLALKKKTALESQLHSDGPQNWPKACPQTYTQHLAAVDENCEINYCVKANSLSAHGLAIVRRPPFRSLPKMNRNITIPLTLINDDTGKVWFKSPMNQKWIMA 1028
+LP L +S+ +E A++ YY N+ GCT+ NS +F+FQA DD SC NF+FGGVYQ C Q+ G+ D + QKNP T D+ CP+GY PV + +I +CHR C F C + + AE+ FWC AS QVP NSG +FGGL++ +NP+T A +CP ++P EN+ VC+S DYELGS++++PF GFFSCT GNPL ++ + D K CP ++QH A + + C+++YCVK+ + L R PPF P M++ T + + N + + W K +W +
Sbjct: 321 DLPGPLVKKVSKTVETAVKRYYTFNTYPGCTDLNSPNFNFQANTDDGSCEGKMTNFSFGGVYQECTQLSGNRDVLLCQKLEQKNPLTGDFSCPSGYSPVHLLSQIHEEGYNHLECHRKCTLLVFCKTVCEDVFQVAKAEFRAFWCVASSQVPENSGLLFGGLFSSKSINPMTNAQSCPAGYFPLRLF-ENLKVCVSQDYELGSRFAVPFGGFFSCTVGNPL-------VDPAISRDLGAPSLKKCPGGFSQHPALISDGCQVSYCVKSGLFTGGSLPPARLPPFTRPPLMSQAATNTVIVTNSENARSWIKDSQTHQWRLG 633
The following BLAST results are available for this feature:
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