TCONS_00062326 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00062326
Unique Name	TCONS_00062326
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1966

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_363:57442..67031+
coding sequence from alignment at scaffold_363:57442..67031+

transcript sequence

>TCONS_00062326 ID=TCONS_00062326|Name=TCONS_00062326|organism=Clytia hemisphaerica|type=transcript|length=1966bp
CTGTTTTGGAAAGATTTCAAGTGGAAATTTTCATTATTGACAAGACAAAC
TATTTAATATATAATTTACAAGCTTCGAGAGCAATGTTTATATGTCTCAA
CCATGCACTCCAACTATGCATACTGTTCTTCTATTTGCGTCTAGTAAATA
GCCTCGAAATCAAACGTATCGGAAATGGAGAAAAAATCGAAAGTGGTGTT
GGAGAGAACCTACAATTCACTTGGAAACTGGACGGTTTACCTTCAGAAGA
TGCTAATTTACATTTCCGACTTTATTACAAAGAAAAGTTGCAAAAGCAAT
ACCAATTATTATCCGCAGAAAACAGCGGAAAGAAAACGGAGACTTTGAAA
CTGGAACAAAACGAACATGCTGAATTAGGACCCTTTGATTTAAACAAAAT
GTCTGGTTCGTGTCAGATAGATTTACCAACTGCCACATGTACTTTTCAAT
TGAACGAGGCTGATTATACACACACTGGAGAATATTTCTTTAGTTATTTT
CATGTTGGTGAGGTCATGGGTCAAATTCGTGATCGAATCAGCCTCAATAT
CGTTGGCGGTCCGGACAGATGCACAGACATTATGCCTCCACAGAATGTAT
CATGCTACATCAATACTATTATGAAGCTATCTGTCGGCTTTTGTGGTAAT
CCTGAACCGAAACTTGTCTGGAAAGTTGGTGGTGTTGTTATTAACGGTAC
TGTGGATCGCAGTCTAAAGGAAAGACATACCTATCAATACCGAGTTCAAT
TTGATACtacaaaagaaaaatgtggtCTGGTTGTCTCTCATAGTGCAATT
GGTTACAGGAAAGGAAATGTGACTGGCAAAACTCTGATCCTTTCAAGGCC
AGAAACATTAAGTGGATCGCCAGAAGGCCTACAACTCCATGCAACAGTCG
GTATCGTAGTCGCTAGTGTCTTACTTCTTCTCATTGTCCTCATCGTCATA
TGTTGTCGTTATTGCAAGAACAAAAGAAACAAAAATCCCAAGAGCAAGGA
AGGGGCAACTTGGGGTGATGATTCAGCTCTAGCTTCAGCTCCTTTAGCCT
CTGAAAATGCTTAACATAAAAACTGTAGAAATCAGGCTGAAGATATGTGA
CAACAACGAAATCGGCGGTGAGAGGGGTTTGAGAACCAGACGATTCAAGC
ATCGGCCAAGTATGATTCTTCTCTGGTACAAAACATGTTTCAATGTTTAT
CAGACGCCATTGGGGCATATGGAAATTAGATAAGCGTTATTTCTTCATAA
GCTATGGGGCATAAGCAAATATCAGAAATAAGAAAAACTATTCGAAACAA
TGGAACGGATATGGCTACTGTATTACTTGGTATGATATTtacatcaaaaa
ttgaaagtgTTTGGAGATATTATGATGAGAAACTGCTGGTGTAGCAAAAC
TATCGAGAAATTTCTAATAAATTTctaataaattaaaataaattaaattt
ctagGACATTCCTGCATATATTTGTAAATAGCTTATTtactttaatttat
ttatttgtatttcgtttttttcaaacaaagattGTGTAGAAAATTTAAAA
CTCAAGCCTCGCTTGTCTGAATCAAAGACATCTACTAAGCCACAGATAGT
AATAAACACGAAATCATCATAGAGGCATACCATCAGGCTAATGCCTCaca
gaaaactttttaattttaacaaattacagtggaacctctaattagcggac
accatcggggaaaggggttagtgccCGCTAATTAGTGTCTatgcctttta
gaaacttttgatcttggagctccaattttgaaattaggccatcccagggt
gtcgaaaatacaaaattggtgtctaaagtacttatctgcagacactaggc
catagaaggacaagagaaagattattaaaacgcaacaatttagtttttaa
taaataaaagaaaatcagtgatttatgatttctttggcccacctaaattc
gttgaatgggtcaagg

Run BLAST on NCBI

protein sequence of TCONS_00062326-protein

>TCONS_00062326-protein ID=TCONS_00062326-protein|Name=TCONS_00062326-protein|organism=Clytia hemisphaerica|type=polypeptide|length=353bp
VLERFQVEIFIIDKTNYLIYNLQASRAMFICLNHALQLCILFFYLRLVNS
LEIKRIGNGEKIESGVGENLQFTWKLDGLPSEDANLHFRLYYKEKLQKQY
QLLSAENSGKKTETLKLEQNEHAELGPFDLNKMSGSCQIDLPTATCTFQL
NEADYTHTGEYFFSYFHVGEVMGQIRDRISLNIVGGPDRCTDIMPPQNVS
CYINTIMKLSVGFCGNPEPKLVWKVGGVVINGTVDRSLKERHTYQYRVQF
DTTKEKCGLVVSHSAIGYRKGNVTGKTLILSRPETLSGSPEGLQLHATVG
IVVASVLLLLIVLIVICCRYCKNKRNKNPKSKEGATWGDDSALASAPLAS
ENA

Run BLAST on NCBI

transcript from alignment at scaffold_363:57442..67031+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00062326 ID=TCONS_00062326|Name=TCONS_00062326|organism=Clytia hemisphaerica|type=transcript|length=9590bp|location=Sequence derived from alignment at scaffold_363:57442..67031+ (Clytia hemisphaerica)
CTGTTTTGGAAAGATTTCAAGTGGAAATTTTCATTATTGACAAGACAAAC
TGTAAGTTTATCGATATAAAGGCTTTGTTAAGTTGGAGGTAGGACTCTAG
CCTgtatatttcttttttacatTTAACTCAAATTTCACAGTCTAAGATTG
TTTGATTCTGTGCATGATTCATTTGAATAAATTTGCATAATTAATGAAAA
CAATGGATTGTCTTTGCAACTTGACTGTTCATTCACTTAATCGTTCAAGC
TATGCATTGTGACGTTGCCAGTAGCTCTCACTAAtctattttcaaatttg
tcaGCCCACTTTTCTTCTTTGTACTGGATActgttttaaaggttttgttt
taaaaagacgcagtaagagtgatatcgtttgcttactcatcaattttatt
tcacaagctttttcgcattggattgacacggatgtggagcaagattgggc
AGAAAGAGGAaagaataacattttttggTTATATCATTATAATattataa
caatagggagacactgtcctgatatgaaatatgtgcctgatatgaaacgg
gaacacttacgtaaaaacaaaacttttaacatGATGTTACTTGTAGTTTA
AGTTTTCCCTCTAaaatttttcgccaaaatattcgcttttctaaaaaatt
aataaacccTTGTATACAATATAAGTTAAATAAAGGGCAATAAAATAGAG
TAAGAATCTTATTATACTGAAAAGTCGACCTCAAGATTTTTCTCATAATA
TAAACACTGGttaattaaaaaaagggggggacAAAACGGGGCAAATCCTT
GTCTCTTCCCCTACTATTTTATTAGTGTCTACTCGacattcttgaaaaag
aaaactttaaaaaatatgaTAAGACGATACAAAAAATTTATCTGAAACAA
GAGAAGAGATTTTCATAAAATGGTTCGAAAAAATTACttattatattttt
tcctttaaaattaaatgaaaaatatcacATTATAGACCCCCCGAAACAAT
TCATCTCGTATAGATCATTATTAAATTTTATCCCGTCTTATCTTGGACTC
AAAAATATCATACTTTTTCAATGGGACGGTTGAGGTTTTTCTCGATATTG
TAACCAATACGTATTGAATGCTAATCTGTAGTTTTGACTACGCGTATTGA
TCTAAGTATGTATGTATCAATGACTCTTTGCCTTCATCAATACTTTATTC
CCTTCAATTTTACGAATTTCCCTCTGTATAGATATAGCTTCAATGatgct
tttcttttttcttagtACAAAGTTGTTCGAATTTATGTTGTTATTTTCAC
TGCTGTAATTTGTGCTGTGATTTGTGCTGAGatgtcgttcttttttttat
tcttgaAGGATCAAGTTTTTTCGCTTTTGAAAAGTAGTCAGATACATAAG
TGACGGAAACTGCATTACGATGTGAAATAACGTGCGATTTTTGCATGATT
TTGGTGGGTCTATCATCTCCGCTCTTAGTTATCTACTGCAATAGAGTCAT
GGAATGGCTAGCTATGGGCatgggaaaaaatgaagaaaaaaccgGGAGTT
TTGATaagaaaaatgtttgaagaGAGATTACGAAAAACGTTTTTCCCGCT
AGATATAAGCATTGGGGCGCTTATTTATTCTTCACAGAATACCCGTGAAG
ATGCTATTTCGATGTTCCTCTTTATTTCTTCTTGTTCCTTTCGGTATGTA
ATGTTCCTTTTGGTATGTAATAGTTGTCATAAAAACAAGAatgtcaaatt
ttgacacgCACCATTTTTAAtcctcatttttcaaaaaagacgcTGCTGGT
TTCAAAGAAAATTGTTTATCTCGTCGTGTTTACATCTAAAAATTGTGTAA
GATGCAATATTACCAAATATTGTTCCTTTTACGTGAGGGAGAAGTGTACT
ATGAACGATAGCAATCCCCCAGTCGCATCTAGTCCTGTCACTGAGACCCA
GGTGAACTTGCTTAGAACACttagacaggggtgtcttaaaATGCTGTTTC
ATTCACATTTTAAACTTGTTTTTCAGATTTAATATATAATTTACAAGCTT
CGAGAGCAATGTTTATATGTCTCAACCATGCACTCCAACTATGCATACTG
TTCTTCTATTTGCGTCTAGGTAAGTCATTTTTCAGGTATTTTTAGATTAT
CTGGTGAATTGCATTGAACTTCTTTGAGTTTTTAAACCTAAAAGGTCCAT
AACAATCAATATTCAACAGAAATCCAATATCTTTCAAAATTAGTGAATCT
AATACGACTATTGCACGGCGTGTTAGTGTGTCGGGTTTTATTAATTCAAT
TTTACtgggaaaagaaaaatagaacgGTGACAGGGTTAAATGAATGCTAG
TGTTTATTGTAGCTCCAACTTTCTACCCGGCTAGAATCCAGGCTAATGTC
ATTTGCGTTTTATTTCGTAGTAAATAGCCTCGAAATCAAACGTATCGGAA
ATGGAGAAAAAATCGAAAGTGGTGTTGGAGAGAACCTACAATTCACTTGG
AAACTGGACGGTTTACCTTCAGAAGATGCTAATTTACATTTCCGACTTTA
TTACAAAGAAAAGTTGCAAAAGCAATACCAATTATTATCCGCAGAAAACA
GCGGAAAGAAAACGGAGACTTTGAAACTGGAACAAAACGAACATGCTGAA
TTAGGACCCTTTGATTTAAACAAAATGTCTGGTTCGTGTCAGATAGATTT
ACCAACTGCCACATGTACTTTTCAATTGAACGAGGCTGATTATACACACA
CTGGAGAATATTTCTTTAGTTATTTTCATGTTGGTGAGGTCATGGGTCAA
ATTCGTGATCGAATCAGCCTCAATATCGTTGgtaagtttgttaaatttct
cttgtgaaaataatttcttgactggaagatttttaaatttcggTCAAGTC
GAAAACAGAGAAATTACATGCGACTGATTCCCTTCGGTAGCTAATTCGCT
ATGTATTAAAGATAAACCATAGTTCGTATAAAAACCCTGGTTTGGAAGCC
TtctgtttctttccattgtttcttacttgaacttacTTTGAGAAATTAGA
tcgttttgctcactttttgatcatgtgatcgaatcttaaaccaatcccaa
gaggagtacatacttggtaacgtgatcaaaaactgttgcaaatcgatttt
tatcttttgacattaacaaaggaaaaagctaacaaaaagttaaaacaaaa
agCTTCCAGACTAGAGTTTTTGATACAGACTATGGGTAAACAGATTTCTG
AGGTAATCAATGTTACTACTGAAATATGTGTGTCCGCTTATTCTAAATTT
CAGATTTGTCTTCTTAGGCGGTCCGGACAGATGCACAGACATTATGCCTC
CACAGAATGTATCATGCTACATCAATACTATTATGAAGCTATCTGTCGGC
TTTTGTGGTAATCCTGAACCGAAACTTGTCTGGAAAGTTGGTGGTGTTGT
TATTAACGGTACTGTGGATCGCAGTCTAAAGGAAAGACATACCTATCAAT
ACCGAGTTCAATTTGATACtacaaaagaaaaatgtggtCTGGTTGTCTCT
CATAGTGCAATTGGTTACAGGAAAGGAAATGTGACTGGCAAAACTCTGAT
CCTTTCAAGGCCAGGTattgaaaattattgttttctttaaatcaaacata
caaacaaaacattttttgacgATTTATGTTTAAGTTTCTTTCTAGAAGAT
CTATTCTAAAAGTAAATTCAAAGCTCGAACGTTCAATTGTAAAGATTTAG
ACTTGTACACGATTTAGTAAATTGCTACACTCGAGGGAAAATCTCATTGC
TCGATAGATCATTTTGAGTTAATAAAATCCAATCAACTAAAAAAACTTTG
TACTGTGAACCATAGATTGTATTGATCTTTACGTAAAAGGgaaattcttc
tttaaaatgaagCGCATTTACTAAAATTTTCAGTTCTAAATATTATTTGA
AATCTAAAACTTTGTCTGACGTCTAACAATGTTACATCCACTGActttta
tataccctggaccaagcttctcaatcccagcaaagcaaaatctttgattg
gagttttttgaaaattggtaccctaatggcggcactactcgataacggtg
taaatgcatcgagagcgctaggtctacttttcctcaaattcttttgatga
tgtagcggcgttagacgttaatttttaacattgcaatggcttctcctcgg
taccaattccaaaaaaactccaatcaaagatggcagacattgcttggtcc
agggttatataaaggtcagtggtttaTCACAATTATCCCTGTGTTTTAAC
ACCCAGATTGAGTAGTAGTACCATTATggtatcatttttttaaaaacttc
gaaccaaagatttttttgttgGTCGGGATTGAGTAACTGCCTGTATGACT
CATTCCAAGCTCATTGACTTCAacacttaaagggacattaaagtagtaaa
atgtaaacattgtgcgaaccacgtgtcattaaagagaacaattaaaatca
cgtgtccaaaacaaacttgtaaaacaattgaacaataaaaattagccata
tttggcttgatgttttattttgacatgtgacatttgttttgattttgtat
ctgctgcatacaatttgtttacaaatttcgcaagtactgttatgtccctt
taacttCTAAATCTTTATATCTTAGAAACATTAAGTGGATCGCCAGAAGG
CCTACAACTCCATGCAACAGTCGGTATCGTAGTCGCTAGTGTCTTACTTC
TTCTCATTGTCCTCATCGTCATATGTTGTCGTTATTGCAAGAACAAAAGA
AACAGTAAGTTGATATCACAAATCCATAAGGAAGAGCTAGATAGGGTACT
TTGGCTGAAAGTGTGCCGCCGTGATTAGATAGGAAATCCTATCTATGCCA
TGTGACAtcacaatagaatttcagcgcttgaccaatcagaagtttCACGG
ATTTGGATTATCGGTATTACGAAGTCCCGTACACCCAAtaaagtataagc
ccgaagggctagaagtcaatctccttgataggatttgaagccaacaaatc
ctaccaaagttgcgcggccttgagcgtcTCGCCTGATGTTTACACAAATA
ACAGATtggaactaaaatttaccgctaaatttcgaaaaaaatatcaatcg
taaacaaaggaattgctagattcaatctatcgtcaaaaatgcggtgcatt
ttttaaggcttcactttttcttgcctgagaaaggttagagattgaactct
agcccttcctggcccttcgggctttaaactcaatgcgtaCACGTCCCCCC
CCCCACTAGCAGCTCCTTCTGTCCATTTCTTCTTTATGNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccccccccc
cctgcatgATGATGTTACGTtcaatttgatctttttttccaTTTGTAGAA
AATCCCAAGAGCAAGGAAGGGGCAACTTGGTAAGTCGAAGCTCCactgtt
tttcgaaaatctcaatgtaaaaaattacaCACAGAACACTGCATACTCCT
CTAATACACGAGTTGCAAAATTATATTGATGGCAgacaaaacatgtgatt
actcgaaaaagttcacgtgattttattccaaTGTTacttaccgtgaaaag
cacagatcaaaatcatatattaacgctgtgccgacgaatcgagattctat
tcatcctGCAATTAACGAAGACAAAAggaaccatgacgaccatctaagat
cttggatgaagttcaaagttgatatttttattcctgtcgttgaaaacaca
actaaaaaatatcatcaatgcttttcaaaaagagtcagtgatagagaacc
ataacataaagtctgtctattatttcgattcaattaaaagtgacatttcc
ccaggggatgtcaatcgaagcGATCGAAGTGATtggtcgaatcaatcgaa
gtcaatcgaagtgattgtcgAATCGATCGACGAATGGATCGAAGTCGATC
AAACccttaaaaaaatgtaaatcttcgattgacttcgatcgacTACGATT
GACTTTGATTGATTCGACCAATCACTTCGATCGACTTCGATTGACTCACT
CAGGCACGGATTTTTCACTTATATCCTTAGGATCCTGAGCATCCTCAAGC
TTTAAGAGGATATCCTCAGGATCCTCTGTTTTGCCTTGAATACGGCTTGA
TAAAAcatcaatattttaatttcCCAAGGATCCTTAGCTAACTCATCAGG
ATCCTCATTTTTTATCTCttcttctcaaaatatgaaccttaggatcctta
gggtcctcaggatATTGCGAGGATATCCTCAGGATCCTCAATTTTATTTC
GATCCTTATTTTAcgtcaattatttttcattaaagaAAGTGAATCTTAGG
ATCCTTAGGATCCTCAGGCTTTCCCAAGGATATCCTCAGGATCCTCAAAA
AAACTAGGGCGATTTAAgatattttgagagaaaaaaactgaggatcctca
ggttatcctcgcaaaagcctgatgaccctaaggatcctaaggttcatatt
ttgagaaaaaaaaaaaaaaattgaggatcctcaggttatcctcgcaaaag
cctgaggaccctaaggatcctaaggttcatattttgagaaaaaagaaata
aaaacgaggatcctcaggatatcctcgcaaaagcctgaggaccctaagga
tcctaaggttcatattttgagaaaaaagaaataaaaacgaggatcctcag
gatatcctcgcaaaagcctgaggaccctatggatcctaaggttcatattt
tgagaaaaaaagaagaaaaagtgaggatcctcagtttatcctcgcaaaag
cctgaggaccctaaggatcctaaggttcatattttgagaaaaaaagaaaa
aaaagtgaggatcctcaggttatcctcgcaaaagcctgaggaccctaagg
atcctaaggttcatattttgagaaaaaaagaaaaaaaagtgaggatcctc
aggttatcctcgcaaaagcctgaggacccaaaggatcctaaggttcatat
tttgagaaaatacaaaaaaaaggtGAGGATATCCTCAGGATCCGGAGgat
aaatgttaaaaatccGTGGTTAGctcgattgacttcgatcgacTTCGATT
TATATTTCCTTTCGAGCCTAAAGGTTGGTCTCCACtagcgcgcgctgcga
tcgcaactTTTTGCTTTGAGAAAAACACAGCGCGCGCTTGCTTTTCAAGC
GAGTCATCGTTACGTCAGATCACGCCAATGGAATGGCTTCATTTTTTtat
gaccaatagcgtggaagctttgctcaaagaagagctatcgcagcgcgtgc
aagtggagaccgacctTAAGGCACAAAGGAGACAGTGAAATTATTTGCCG
CAAGAAAGTTACGACGGTAACGACAAGCAAGTCGATCGAAGTCGATCGAA
GTCgatcaaaaagaggaaaaaaatgtaaatcttcGATCGACTTCAATCGA
TTCGACCGATCACTTCGATcgacttcgattgacttcgatcgattcgacaa
tcgaatttttcgattgacatcccctggtaaatagtaaactgcatactgat
acagtctgctagacatttataaggtaatatttgctcttcatctttgatgc
tttctacagtgattaggttgacacatgcgcgataaaatttctattattgg
tattattggttaatatattctttgaaaacttaacctctgatactcagggt
acatgttacttgctttataacttacagctgataactttattagtgtcaat
aaattcgaaccaatcaaaaataaatgtcatgtagcAAGCTCAtaaaaatt
ttgagtaaaaacgTGATCTGTCtttagactttaattttgcaacctgtgtc
tTACTAGTCACTTTTAGTGCCTTCCATTCAATGAAATTGAGCTCTGAATA
CACCCATGTCTCGCTGTCCCGGggcaacttttttcttcagtggggataaa
aatccctattgaaatcccgatggggatagaaattctatcgtaccaaggtt
aaaaaatccattgtggatggtttttgagtgcaattttcaagcattgaatt
tcgagtggggatgaaatcaactTGAAtgtcccagtggggctgaaattcca
gggtattttcctatcggggacaaaattttccagtgggccGGGGTATTAGC
AGATCTGTGACATAGGGGTGTCTGAATTTATACTACTCAGCGAAGCAATG
GTAAAATAAcacttttgaatatcttttcaatcaaaaacaTTGATCACCGA
TCATTTTGTGTACTGTTGAAACCCATCAACTATTAAGGCCTCCTTATTTT
TTCAATCgttgtctttttataagaacaaactgtataagaacataaagctt
ccgAGGctctttgcggactctaaaagcACCCGATTTTCTTTGGAAATAGG
ACAAAGATttgttatgttcttataaaaaacgtgtaaatctGCAAAATTGA
GAACGTCTGGTTATTGGTTGAAAGCCTTTGATTCATCACTTTGCTCTTTA
CCAtaatgttttaaagtttaagGTTTGTGACAACAAATGGCAGCTTTTTA
AGTTGTAACAAAAAATGTGTTCATCTTATTTTTTAGGGGTGATGATTCAG
CTCTAGCTTCAGCTCCTTTAGCCTCTGAAAATGCTTAACATAAAAACTGT
AGAAATCAGGCTGAAGATATGTGACAACAACGAAATCGGCGGTGAGAGGG
GTTTGAGAACCAGACGATTCAAGCATCGGCCAAGTATGATTCTTCTCTGG
TACAAAACATGTTTCAATGTTTATCAGACGCCATTGGGGCATATGGAAAT
TAGATAAGCGTTATTTCTTCATAAGCTATGGGGCATAAGCAAATATCAGA
AATAAGAAAAACTATTCGAAACAATGGAACGGATATGGCTACTGTATTAC
TTGGTATGATATTtacatcaaaaattgaaagtgTTTGGAGATATTATGAT
GAGAAACTGCTGGTGTAGCAAAACTATCGAGAAATTTCTAATAAATTTct
aataaattaaaataaattaaatttctagGACATTCCTGCATATATTTGTA
AATAGCTTATTtactttaatttatttatttgtatttcgtttttttcaaac
aaagattGTGTAGAAAATTTAAAACTCAAGCCTCGCTTGTCTGAATCAAA
GACATCTACTAAGCCACAGATAGTAATAAACACGAAATCATCATAGAGGC
ATACCATCAGGCTAATGCCTCacagaaaactttttaattttaacaaatta
cagtggaacctctaattagcggacaccatcggggaaaggggttagtgccC
GCTAATTAGTGTCTatgccttttagaaacttttgatcttggagctccaat
tttgaaattaggccatcccagggtgtcgaaaatacaaaattggtgtctaa
agtacttatctgcagacactaggccatagaaggacaagagaaagattatt
aaaacgcaacaatttagtttttaataaataaaagaaaatcagtgatttat
gatttctttggcccacctaaattcgttgaatgggtcaagg

Coding sequence (CDS) from alignment at scaffold_363:57442..67031+

>TCONS_00062326 ID=TCONS_00062326|Name=TCONS_00062326|organism=Clytia hemisphaerica|type=CDS|length=7434bp|location=Sequence derived from alignment at scaffold_363:57442..67031+ (Clytia hemisphaerica)
GTTTTGGAAAGATTTCAAGTGGAAATTTTCATTATTGACAAGACAAACTA
TTTAATATATAATTTACAAGCTTCGAGAGCAATGTTTATATGTCTCAACC
ATGCACTCCAACTATGCATACTGTTCTTCTATTTGCGTCTAGTAAATAGC
CTCGAAATCAAACGTATCGGAAATGGAGAAAAAATCGAAAGTGGTGTTGG
AGAGAACCTACAATTCACTTGGAAACTGGACGGTTTACCTTCAGAAGATG
CTAATTTACATTTCCGACTTTATTACAAAGAAAAGTTGCAAAAGCAATAC
CAATTATTATCCGCAGAAAACAGCGGAAAGAAAACGGAGACTTTGAAACT
GGAACAAAACGAACATGCTGAATTAGGACCCTTTGATTTAAACAAAATGT
CTGGTTCGTGTCAGATAGATTTACCAACTGCCACATGTACTTTTCAATTG
AACGAGGCTGATTATACACACACTGGAGAATATTTCTTTAGTTATTTTCA
TGTTGGTGAGGTCATGGGTCAAATTCGTGATCGAATCAGCCTCAATATCG
TTGGCGGTCCGGACAGATGCACAGACATTATGCCTCCACAGAATGTATCA
TGCTACATCAATACTATTATGAAGCTATCTGTCGGCTTTTGTGGTAATCC
TGAACCGAAACTTGTCTGGAAAGTTGGTGGTGTTGTTATTAACGGTACTG
TGGATCGCAGTCTAAAGGAAAGACATACCTATCAATACCGAGTTCAATTT
GATACtacaaaagaaaaatgtggtCTGGTTGTCTCTCATAGTGCAATTGG
TTACAGGAAAGGAAATGTGACTGGCAAAACTCTGATCCTTTCAAGGCCAG
AAACATTAAGTGGATCGCCAGAAGGCCTACAACTCCATGCAACAGTCGGT
ATCGTAGTCGCTAGTGTCTTACTTCTTCTCATTGTCCTCATCGTCATATG
TTGTCGTTATTGCAAGAACAAAAGAAACAAAAATCCCAAGAGCAAGGAAG
GGGCAACTTGGGGTGATGATTCAGCTCTAGCTTCAGCTCCTTTAGCCTCT
GAAAATGCTTAAGTTTTGGAAAGATTTCAAGTGGAAATTTTCATTATTGA
CAAGACAAACTATTTAATATATAATTTACAAGCTTCGAGAGCAATGTTTA
TATGTCTCAACCATGCACTCCAACTATGCATACTGTTCTTCTATTTGCGT
CTAGTAAATAGCCTCGAAATCAAACGTATCGGAAATGGAGAAAAAATCGA
AAGTGGTGTTGGAGAGAACCTACAATTCACTTGGAAACTGGACGGTTTAC
CTTCAGAAGATGCTAATTTACATTTCCGACTTTATTACAAAGAAAAGTTG
CAAAAGCAATACCAATTATTATCCGCAGAAAACAGCGGAAAGAAAACGGA
GACTTTGAAACTGGAACAAAACGAACATGCTGAATTAGGACCCTTTGATT
TAAACAAAATGTCTGGTTCGTGTCAGATAGATTTACCAACTGCCACATGT
ACTTTTCAATTGAACGAGGCTGATTATACACACACTGGAGAATATTTCTT
TAGTTATTTTCATGTTGGTGAGGTCATGGGTCAAATTCGTGATCGAATCA
GCCTCAATATCGTTGGCGGTCCGGACAGATGCACAGACATTATGCCTCCA
CAGAATGTATCATGCTACATCAATACTATTATGAAGCTATCTGTCGGCTT
TTGTGGTAATCCTGAACCGAAACTTGTCTGGAAAGTTGGTGGTGTTGTTA
TTAACGGTACTGTGGATCGCAGTCTAAAGGAAAGACATACCTATCAATAC
CGAGTTCAATTTGATACtacaaaagaaaaatgtggtCTGGTTGTCTCTCA
TAGTGCAATTGGTTACAGGAAAGGAAATGTGACTGGCAAAACTCTGATCC
TTTCAAGGCCAGAAACATTAAGTGGATCGCCAGAAGGCCTACAACTCCAT
GCAACAGTCGGTATCGTAGTCGCTAGTGTCTTACTTCTTCTCATTGTCCT
CATCGTCATATGTTGTCGTTATTGCAAGAACAAAAGAAACAAAAATCCCA
AGAGCAAGGAAGGGGCAACTTGGGGTGATGATTCAGCTCTAGCTTCAGCT
CCTTTAGCCTCTGAAAATGCTTAAGTTTTGGAAAGATTTCAAGTGGAAAT
TTTCATTATTGACAAGACAAACTATTTAATATATAATTTACAAGCTTCGA
GAGCAATGTTTATATGTCTCAACCATGCACTCCAACTATGCATACTGTTC
TTCTATTTGCGTCTAGTAAATAGCCTCGAAATCAAACGTATCGGAAATGG
AGAAAAAATCGAAAGTGGTGTTGGAGAGAACCTACAATTCACTTGGAAAC
TGGACGGTTTACCTTCAGAAGATGCTAATTTACATTTCCGACTTTATTAC
AAAGAAAAGTTGCAAAAGCAATACCAATTATTATCCGCAGAAAACAGCGG
AAAGAAAACGGAGACTTTGAAACTGGAACAAAACGAACATGCTGAATTAG
GACCCTTTGATTTAAACAAAATGTCTGGTTCGTGTCAGATAGATTTACCA
ACTGCCACATGTACTTTTCAATTGAACGAGGCTGATTATACACACACTGG
AGAATATTTCTTTAGTTATTTTCATGTTGGTGAGGTCATGGGTCAAATTC
GTGATCGAATCAGCCTCAATATCGTTGGCGGTCCGGACAGATGCACAGAC
ATTATGCCTCCACAGAATGTATCATGCTACATCAATACTATTATGAAGCT
ATCTGTCGGCTTTTGTGGTAATCCTGAACCGAAACTTGTCTGGAAAGTTG
GTGGTGTTGTTATTAACGGTACTGTGGATCGCAGTCTAAAGGAAAGACAT
ACCTATCAATACCGAGTTCAATTTGATACtacaaaagaaaaatgtggtCT
GGTTGTCTCTCATAGTGCAATTGGTTACAGGAAAGGAAATGTGACTGGCA
AAACTCTGATCCTTTCAAGGCCAGAAACATTAAGTGGATCGCCAGAAGGC
CTACAACTCCATGCAACAGTCGGTATCGTAGTCGCTAGTGTCTTACTTCT
TCTCATTGTCCTCATCGTCATATGTTGTCGTTATTGCAAGAACAAAAGAA
ACAAAAATCCCAAGAGCAAGGAAGGGGCAACTTGGGGTGATGATTCAGCT
CTAGCTTCAGCTCCTTTAGCCTCTGAAAATGCTTAAGTTTTGGAAAGATT
TCAAGTGGAAATTTTCATTATTGACAAGACAAACTATTTAATATATAATT
TACAAGCTTCGAGAGCAATGTTTATATGTCTCAACCATGCACTCCAACTA
TGCATACTGTTCTTCTATTTGCGTCTAGTAAATAGCCTCGAAATCAAACG
TATCGGAAATGGAGAAAAAATCGAAAGTGGTGTTGGAGAGAACCTACAAT
TCACTTGGAAACTGGACGGTTTACCTTCAGAAGATGCTAATTTACATTTC
CGACTTTATTACAAAGAAAAGTTGCAAAAGCAATACCAATTATTATCCGC
AGAAAACAGCGGAAAGAAAACGGAGACTTTGAAACTGGAACAAAACGAAC
ATGCTGAATTAGGACCCTTTGATTTAAACAAAATGTCTGGTTCGTGTCAG
ATAGATTTACCAACTGCCACATGTACTTTTCAATTGAACGAGGCTGATTA
TACACACACTGGAGAATATTTCTTTAGTTATTTTCATGTTGGTGAGGTCA
TGGGTCAAATTCGTGATCGAATCAGCCTCAATATCGTTGGCGGTCCGGAC
AGATGCACAGACATTATGCCTCCACAGAATGTATCATGCTACATCAATAC
TATTATGAAGCTATCTGTCGGCTTTTGTGGTAATCCTGAACCGAAACTTG
TCTGGAAAGTTGGTGGTGTTGTTATTAACGGTACTGTGGATCGCAGTCTA
AAGGAAAGACATACCTATCAATACCGAGTTCAATTTGATACtacaaaaga
aaaatgtggtCTGGTTGTCTCTCATAGTGCAATTGGTTACAGGAAAGGAA
ATGTGACTGGCAAAACTCTGATCCTTTCAAGGCCAGAAACATTAAGTGGA
TCGCCAGAAGGCCTACAACTCCATGCAACAGTCGGTATCGTAGTCGCTAG
TGTCTTACTTCTTCTCATTGTCCTCATCGTCATATGTTGTCGTTATTGCA
AGAACAAAAGAAACAAAAATCCCAAGAGCAAGGAAGGGGCAACTTGGGGT
GATGATTCAGCTCTAGCTTCAGCTCCTTTAGCCTCTGAAAATGCTTAAGT
TTTGGAAAGATTTCAAGTGGAAATTTTCATTATTGACAAGACAAACTATT
TAATATATAATTTACAAGCTTCGAGAGCAATGTTTATATGTCTCAACCAT
GCACTCCAACTATGCATACTGTTCTTCTATTTGCGTCTAGTAAATAGCCT
CGAAATCAAACGTATCGGAAATGGAGAAAAAATCGAAAGTGGTGTTGGAG
AGAACCTACAATTCACTTGGAAACTGGACGGTTTACCTTCAGAAGATGCT
AATTTACATTTCCGACTTTATTACAAAGAAAAGTTGCAAAAGCAATACCA
ATTATTATCCGCAGAAAACAGCGGAAAGAAAACGGAGACTTTGAAACTGG
AACAAAACGAACATGCTGAATTAGGACCCTTTGATTTAAACAAAATGTCT
GGTTCGTGTCAGATAGATTTACCAACTGCCACATGTACTTTTCAATTGAA
CGAGGCTGATTATACACACACTGGAGAATATTTCTTTAGTTATTTTCATG
TTGGTGAGGTCATGGGTCAAATTCGTGATCGAATCAGCCTCAATATCGTT
GGCGGTCCGGACAGATGCACAGACATTATGCCTCCACAGAATGTATCATG
CTACATCAATACTATTATGAAGCTATCTGTCGGCTTTTGTGGTAATCCTG
AACCGAAACTTGTCTGGAAAGTTGGTGGTGTTGTTATTAACGGTACTGTG
GATCGCAGTCTAAAGGAAAGACATACCTATCAATACCGAGTTCAATTTGA
TACtacaaaagaaaaatgtggtCTGGTTGTCTCTCATAGTGCAATTGGTT
ACAGGAAAGGAAATGTGACTGGCAAAACTCTGATCCTTTCAAGGCCAGAA
ACATTAAGTGGATCGCCAGAAGGCCTACAACTCCATGCAACAGTCGGTAT
CGTAGTCGCTAGTGTCTTACTTCTTCTCATTGTCCTCATCGTCATATGTT
GTCGTTATTGCAAGAACAAAAGAAACAAAAATCCCAAGAGCAAGGAAGGG
GCAACTTGGGGTGATGATTCAGCTCTAGCTTCAGCTCCTTTAGCCTCTGA
AAATGCTTAAGTTTTGGAAAGATTTCAAGTGGAAATTTTCATTATTGACA
AGACAAACTATTTAATATATAATTTACAAGCTTCGAGAGCAATGTTTATA
TGTCTCAACCATGCACTCCAACTATGCATACTGTTCTTCTATTTGCGTCT
AGTAAATAGCCTCGAAATCAAACGTATCGGAAATGGAGAAAAAATCGAAA
GTGGTGTTGGAGAGAACCTACAATTCACTTGGAAACTGGACGGTTTACCT
TCAGAAGATGCTAATTTACATTTCCGACTTTATTACAAAGAAAAGTTGCA
AAAGCAATACCAATTATTATCCGCAGAAAACAGCGGAAAGAAAACGGAGA
CTTTGAAACTGGAACAAAACGAACATGCTGAATTAGGACCCTTTGATTTA
AACAAAATGTCTGGTTCGTGTCAGATAGATTTACCAACTGCCACATGTAC
TTTTCAATTGAACGAGGCTGATTATACACACACTGGAGAATATTTCTTTA
GTTATTTTCATGTTGGTGAGGTCATGGGTCAAATTCGTGATCGAATCAGC
CTCAATATCGTTGGCGGTCCGGACAGATGCACAGACATTATGCCTCCACA
GAATGTATCATGCTACATCAATACTATTATGAAGCTATCTGTCGGCTTTT
GTGGTAATCCTGAACCGAAACTTGTCTGGAAAGTTGGTGGTGTTGTTATT
AACGGTACTGTGGATCGCAGTCTAAAGGAAAGACATACCTATCAATACCG
AGTTCAATTTGATACtacaaaagaaaaatgtggtCTGGTTGTCTCTCATA
GTGCAATTGGTTACAGGAAAGGAAATGTGACTGGCAAAACTCTGATCCTT
TCAAGGCCAGAAACATTAAGTGGATCGCCAGAAGGCCTACAACTCCATGC
AACAGTCGGTATCGTAGTCGCTAGTGTCTTACTTCTTCTCATTGTCCTCA
TCGTCATATGTTGTCGTTATTGCAAGAACAAAAGAAACAAAAATCCCAAG
AGCAAGGAAGGGGCAACTTGGGGTGATGATTCAGCTCTAGCTTCAGCTCC
TTTAGCCTCTGAAAATGCTTAAGTTTTGGAAAGATTTCAAGTGGAAATTT
TCATTATTGACAAGACAAACTATTTAATATATAATTTACAAGCTTCGAGA
GCAATGTTTATATGTCTCAACCATGCACTCCAACTATGCATACTGTTCTT
CTATTTGCGTCTAGTAAATAGCCTCGAAATCAAACGTATCGGAAATGGAG
AAAAAATCGAAAGTGGTGTTGGAGAGAACCTACAATTCACTTGGAAACTG
GACGGTTTACCTTCAGAAGATGCTAATTTACATTTCCGACTTTATTACAA
AGAAAAGTTGCAAAAGCAATACCAATTATTATCCGCAGAAAACAGCGGAA
AGAAAACGGAGACTTTGAAACTGGAACAAAACGAACATGCTGAATTAGGA
CCCTTTGATTTAAACAAAATGTCTGGTTCGTGTCAGATAGATTTACCAAC
TGCCACATGTACTTTTCAATTGAACGAGGCTGATTATACACACACTGGAG
AATATTTCTTTAGTTATTTTCATGTTGGTGAGGTCATGGGTCAAATTCGT
GATCGAATCAGCCTCAATATCGTTGGCGGTCCGGACAGATGCACAGACAT
TATGCCTCCACAGAATGTATCATGCTACATCAATACTATTATGAAGCTAT
CTGTCGGCTTTTGTGGTAATCCTGAACCGAAACTTGTCTGGAAAGTTGGT
GGTGTTGTTATTAACGGTACTGTGGATCGCAGTCTAAAGGAAAGACATAC
CTATCAATACCGAGTTCAATTTGATACtacaaaagaaaaatgtggtCTGG
TTGTCTCTCATAGTGCAATTGGTTACAGGAAAGGAAATGTGACTGGCAAA
ACTCTGATCCTTTCAAGGCCAGAAACATTAAGTGGATCGCCAGAAGGCCT
ACAACTCCATGCAACAGTCGGTATCGTAGTCGCTAGTGTCTTACTTCTTC
TCATTGTCCTCATCGTCATATGTTGTCGTTATTGCAAGAACAAAAGAAAC
AAAAATCCCAAGAGCAAGGAAGGGGCAACTTGGGGTGATGATTCAGCTCT
AGCTTCAGCTCCTTTAGCCTCTGAAAATGCTTAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_039064	XLOC_039064	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00062326-protein	TCONS_00062326-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_363	supercontig	scaffold_363:57442..67031 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.480818	0.514506	0.645399	0.613042	0.320153	0.137813	1.9403	1.81448	3.17301	2.67286	1.22277	2.24796	6.61303	4.41309	3.09415	3.33851	2.29656	3.02167	7.17876	9.4297	4.78887	4.89416	1.94252	3.07075	3.59477	4.36443	4.98578	3.90229	0.753223	0.851293

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR013783	Ig-like_fold

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00062326 vs. Swiss-Prot (Human)

BLAST of TCONS_00062326 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00062326 (transcript) - C. hemisphaerica