TCONS_00065204 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065204
Unique NameTCONS_00065204
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1382

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065204 ID=TCONS_00065204|Name=TCONS_00065204|organism=Clytia hemisphaerica|type=transcript|length=1382bp
aattaaaagaAGCCTGGTGTTTGGGTACTTTGTTCATAAAGTGAATATCA
CTGGCAGAAGCAAAAgataaaGAACTCAACAACAAATATCGACATGACTA
GTTTTATCAACAATACTACGGTTCGACCAATCACATCAAACCTAACGACA
CCATCTTTATTCTACGAACCGCCTCCTTATCCATGCATCTGGCCTCTGTT
CCCGCAATATTCATTCACCAGTCTAACTCTTGCAATTTTGATCATAACAT
TGAATGGTTTTGTCGTTTACCTATTCTTTCGAAACAAAATTCTACGCTTG
CTGCCAGGAAATTATATCTTAGCAAGTTTAGCGGTTAATGATCTCCTTAA
TGGTTTATTCCTTGTTTCCAAACTCTACCCGAatttttatctccataata
ATGACTGTTCGAATaatcaacaaaagtttttgaaagccGAATTTCCAACA
ATAAGTAATACAATTTATCTTTTATTAATGTTATCTTCAATCCTTCATTT
GGTGTTATTATCAACCGATCGACTGATATACATCATTCATGCTTTAACAT
ATAACTCTATAGTCACCAAACGAAAGATGTTAAAAATCTTAGCAATCACT
TGGTTACTTTGCGGTATCTTCGCTGCCCTTAAGTTCCTGTGGAGTCTCAA
AAGTGGACCTTTAAATCCATATCGGAAATCAATCAAGATCTACGCTGCAA
TCACCATAGCTGTTTTATTCATCGGCCTTCCGTCTATAATTCTACTTATC
CAGTCTATCATTATGGTGTTAATGGTACGCAGGCTAGACAATAAAAGTAG
CCCGGATCCTAATAAACGAACGGGAGGTTGTAAAGCGTTTGTACTGTACA
TGTTTATGTATTTAAAGTTCATGGTTTTTGCGTACCCCTATCTGATTATC
ATGTTGATGTTTCAATTCGGTGCATTTGAGCCTCCTCTTATTGCACCGTC
AATGAACGCCATTGTTATTTGTACCGTTATTCGGTTTGTACCTTGTCTCG
TTAACCCATGTTTATACAGCTtacaaaataaagattttaggAAAGTTATC
AAGACTTATTTGAAATATTGTCGGAAAACTTCGCAGAGTTATGCAATGGT
TAGGAAAACGGGAGCCTCGAATTATTTGGGGACACTCTCGCCTCAGACAA
ATCTTTATAAAATGAACGGTGATTCTACGGAAGAAAGTTTGGTCAATTTA
TGAAATGAAAACTCTTACATGATGAATTAAATAATAAACTACCTAACATC
CAACAGTTGATTGATTGTAAGTTGTAAGTGGGTTTGTTGGCTGTTGGGTT
TTGCCACTCgttatttaatatttttcaaatttgaagtcAAACAGTTGTAC
ATTTATTAAAGTCAGTCTTgatataatctgca
Run BLAST on NCBI

protein sequence of TCONS_00065204-protein

>TCONS_00065204-protein ID=TCONS_00065204-protein|Name=TCONS_00065204-protein|organism=Clytia hemisphaerica|type=polypeptide|length=369bp
MTSFINNTTVRPITSNLTTPSLFYEPPPYPCIWPLFPQYSFTSLTLAILI
ITLNGFVVYLFFRNKILRLLPGNYILASLAVNDLLNGLFLVSKLYPNFYL
HNNDCSNNQQKFLKAEFPTISNTIYLLLMLSSILHLVLLSTDRLIYIIHA
LTYNSIVTKRKMLKILAITWLLCGIFAALKFLWSLKSGPLNPYRKSIKIY
AAITIAVLFIGLPSIILLIQSIIMVLMVRRLDNKSSPDPNKRTGGCKAFV
LYMFMYLKFMVFAYPYLIIMLMFQFGAFEPPLIAPSMNAIVICTVIRFVP
CLVNPCLYSLQNKDFRKVIKTYLKYCRKTSQSYAMVRKTGASNYLGTLSP
QTNLYKMNGDSTEESLVNL
Run BLAST on NCBI

transcript from alignment at scaffold_433:305351..314739-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065204 ID=TCONS_00065204|Name=TCONS_00065204|organism=Clytia hemisphaerica|type=transcript|length=9389bp|location=Sequence derived from alignment at scaffold_433:305351..314739- (Clytia hemisphaerica)
AATTAAAAGAAGCCTGGTGTTTGGGTACTTTGTTCATAAAGTGAATATCA
CTGGCAGAAGCAAAAGGTTTGTGATTTTTTTCTTTGTTTCTTTTTATTAA
TTTCGTTTTCCTCCAAAAAGGTTCCTTTTTGGGATTTCGAACAAGAGTAA
TTTTAGCGTATATTAGCGAGTCAGGAAAATCTTGATTTTTTTTGGATTTA
TTTTAGCGAATCACGATTTCAAAAAATTTCGCGTGGATAAATTTTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNATTCGGCGTGTTTTAGCGAGATTAATTTTAGC
GAAAATAGGGAAAACTCGCTAAAACGCTAAAATTAGTCTCGCTAAAATTT
CTACGATTAAAGTAGCTGTTATTCTGCTATTTCTCCAGTTTAGCTAAAAT
CTTATACAATGATTGTCATTCTGTCTGACTCCTTAGGAGGATTTTGAATC
GTATTCCCTTTATGCTCGAGTTAGGAATGTTGTGATATTCTTATTTTGCT
CAGAATTTCAATTATTTTTGTTGAAGAATTCAACTTTTGAAAATTGTACA
TTTTTTAGGAAATTTTTTCTCACAGTTTTGCCCGTAGCATAACGGGTCCT
AAGGAATAGCCCTATACTAGTAGTCCAGAAACTTCAAAAAGGGTTGTGAA
CGTGCTTTTTACATTGCTGAAGTAGAACAAAGAATAGTGAGGCATAAAAA
CAATTTTTAAATCCTTCGGATGGCCCAGTCGGAGAGGGGAGGGCTGAACC
CATAACCTTTATCATTTTAATGCTATAGTTGCCGGTTAAACGGAGTAAAA
GTACTACAGTACTTAAAAGTACTACAGCTAAAACATGATATTTTTCATTC
CTCAAACAAGGAATTTTTTTCCCTTTTCAAAGGCCCACAAAAATTCATGT
CTCTATTGTTCAACATAATTATCAAAGTCAACAAAATTAAGGCCAAAAGG
AGGGGTGATCGTGTGTAGAAAAACAGAGCCTTACAAATAATAGAGGGAAC
ATGGCTAATTTTCTTTTATTTTCTTGACTTATTTTCTAAAAAGAGTGAAT
TTCTTTATATTTCTTTCATTCCCTTCTTGAAGGGATATCGACTTTTATCA
TTTGGACGCTACAGGCTTTTTGTGTTTTTGCTTTTTGTTCCTTTTCTGTA
GTACTAGTGATTATGCAAGCTCGGCCTTTTGGAAAGAAAGTGCTATGTGC
GTAGGTATAGTCTAGTTGCTCAAAACAATTTCATGAAATCAATAAAGAAA
CAGGTGTAGTGTGTGGAAGATTGATTTTGATTGCTTAGTTGGGTTGTTTT
GATTAGTACTAGTAATCGTATGGTTTGGAGTGCAATTAACGATTAATCAC
GAGTAACAAAGGAGAAAATAGTAATTTGCACAAGTCCGAAGGACAAGTGC
AAATTACGGTATTTTCTCTAATTTACACGACAGGTTCTTTTTGTTTAGTC
GTATTATTCTTATAAAGAAAGGAGCTTATAAGTTAAAATGACGGTTCATT
TTGTTTCGGGAAAAAAGAACCTTTAGTTAGTCTGAATCGCAGACTTCTAC
AAAACCCCAGATATCTATAAGCAGCACGAATCTGTGAATGCCACAGCAGC
CTAACCTTCAGTGTTCTAAAATTTGTGAATCTCTTTACTCAAAAACGTAA
GAGAACCAACATTTATCCGTCGTTTAGTCGTCTCCAGAAACTAATGATAT
GGTTTTTTCTTTGTTCTCAAATTTAGAGAACAGTCGATAGAAGTGTGTGA
ACTCAACCTATGCTATTGGGATATTCGGAGCTATTCGGACCCAGTGTCAA
AAAGCTCCCTCAGCAACACTGAGGGAGTGAGGAAATATTGGAGGGAGGGG
TGGACAACCAATTATGTCCAAAATTGTACCAAGCCTGATTTTATGTTAAC
ATGCATCCCGCGCGCAGAAAGCTATTCAAAAAGTAGCCTGGAAACTATGC
CATACACGTCTTTTTATAAGAATACGCTTTACAAGAATGTCCATGATGAA
AATGGCCAAAAAATTAAGAATAATGCTAAGAATATCGCCATCATGGAATT
TTGCTACTCAAGCTAAGAATGCCATTTTAGAGCATTTTCGATTATAAATT
GTGAATTACCCCCAAGACGCCAAGTAAGGCTCACTTCTTTCACAAAAATA
CCATTTTATGCTTGAGACTTATGTACTAAATGTTAAATCTAGTCTGAATT
AGGATCCTAACCTAACAATGGTGTAAGATATTTTAAGATGATTTTCCCAA
AAAAGTTAAGAATATCCATGATGAAATGGATTTACACCATTCTTATAAAA
AAAGCGTGTAACCAGTTTGTTGAATCTTTTGAAAATTTGATTGACGATGA
ATTCAGCAAAATGTTTTGATCACCATGGTGCATTTTCTTAGTTTTAGTCG
AGGCGAACCTCTTGCTTTTGAGATTTCATAGGAGGGAAAAACTATAACAG
CGGTTTTGAATTCGCGTACGTACTCTTCAAAAAAGATAAGAAAAAAATAT
CAAAGCAAAGAAAATATTTGATATCAAGATGGAGATATATTTCAAGATTT
TCGACCATATTGTGATAAAAAATGGTATTTTTTTATGCTTTTATTTTTCC
CTTTGAGTTCCTTTTGGTTCACCAACCCTTTGCTGGAGGTTTTTTAATTT
TGTTTCTTGAAGAAAAAACTTGTCCTGGTTTGATTCTTTATTTATGAGTT
GACTTGAGTGGGTCAAATTATTTTTCAAGAGTTGCCTAAAAGTGAAATTC
TCTACTTCCGACATTGGGTACCTAAGATATACCAAAACTTTTGGCAGTCT
GTACATTTATTGAGAAATGATAAAAAGTAATAACCCGTTTGAAAGATAAT
TTAAAGTTGATCAATTGAAATTTTTATAACGCTTTCACGAAAATTGAAAG
TTAGTATGAAAAACGAAGAAAACATTTCCAATCTCTAGGGAGATATGTGC
TAGGGATAGCAGATGTTTGTCTAATCAATACGTTTCAAAATTCCGACTTC
TTGTTACTGTGACTAAAATTTTGTGCAGAAATAGTGACGCTTAGTGAGTA
TATAAGGTATACTGATAGAAAAGTGACTCCCTTAGTGAAATTTTCTTAGA
AAAGTTTTTCACCTTGCAAGATTACAATGACATTTTGAAATTTTGTTTAT
CTTACACTATTCAGAGGGACTTTGGCGGAGGAATATGAACATTAAAAAAC
ATCGTCAACGCACCCGTTTTTGCGGATGGTGTATTCCGCCTAAAATTCGA
AATCCAATGGAGAAAGATAGCATCAAAGTAGTATCCTTTTATGTTTTTAT
TAGATAAATTTTCAATATAATAAACCTCCTTTCTCTCCGTAGATTAATTA
GCCTCCTGTGTTGCACACTATCTTTTTAAAGACCAACTTAGGCCATGAAA
ATTAACCAAAACCTTAGAATAAAATTCAGATAAAAATATACAAACTTGCA
ACAGAGGGTGGGTAGGAATTTACTGGTTCTTATAAAAAGATGTTCTATTC
TTTATGGATTAGTAACAACCTACGCACTAGAAGATGTTTCTTTTTTTCCT
ACTTTGATCAATTTTTATAATTTAATTTTCATTTTTCTCCTTTTCCCCTA
CCACCACACCTAAATGCCATCTTATCGTGTTTGAAATGCAAAGTCCCATT
TTTATTATGTGAAGTAAGGGATAGATTTCAATTTTGAAACTCAAATTTCG
AAATCAAAGACATTGAAAATAATAAAAAATAATTCTACATTTTCAATTGT
GGATAGCTGGGCATGAAACCATAGTTCGTATAAAAAACTCTGGTCTGGAA
GCTTATTGTTTTATCTTTTTGTTAGTTTTATCAAAAGATAAAAATCGATT
TGCTCGGTTTTTAATCACGTTACCAAGTACTCCTCTTGGTATTGGTTTAA
GATTTAATCACGTGATCAAAAAGCGAGCAAAAACAAACTAATTTCTCAAA
GGAATGAGAAACGGCAGTCATTCCAGTTGATAGTTTGACGTCACGTTGTA
CGAGAGAGTGTTGTTTGTATGATTTCTACTCATATCTTTGCTTACGGTGA
ACAGTTTATCTTCCCTTGAATTTCAACCTGTGTAGACAAACTGCAAGAAT
TTAATCGCACATGTCTCAATCATATTACTATTCAAAAAATCGAAGATGGA
GACCATGTAAAGCTTAATAGTCCGGCGGCGATCCAGGATCACCCTTACAA
TTAGTAAATATGGGTTTTTATTTTATTTTCCCATCATATAGTCCCTTGGG
ACCCCAAAACCAGTTTTTGCCAAGCTGGCAAAGCCGGGAAAAATTTTTTA
TGGGGGCTTGAAGGGGGTAGGGTCATTTTAGCCTGGGGGTCCTTAGAAAG
TCGATTTTTGAAGTTCTTATTTAGCTAAAACTGATTGTGCCATCAGATAG
AGCTTGAAGAGTAGATCTCCAGAATGGGGTCATTTGTCTCATTTGGCGGA
CTTAGTACCCCGGAATTGGCTGATACGTATTCAAAAATGCAATATTTTAT
GCTGACGTCAGCATTTTTGAGAGAATTTCCAGCGAAAGATACCAATTTTA
ACAGATGCGTCTCGAAGTGTACTATCGATTAGAGGGGTCATTTATAGGGT
TTCCTAGGCTAGATCATGAGATATTTGAGTTTGAAATTTTGCTGACTCAG
CGTTTTTCAACGTTTTTGGCCCTTTTATATACATATACCCACATATATAT
ATACACGCATATATCTAAAGTCTATTAGCCTCCGTCTCAGAACGCGGTCA
GAAGATTTTGCGGATAATTTCACAGCGAAAATGCATCCAGTGAAATGGGA
GTAATGTATCATGATTCAAGTCGACTGACATAATTATACACATAATACAT
GTTACAAGTTCTGCCTACGGATTCTCAAGCTCAGCTATTATAAAACTATT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAT
CTTGAGAAACACTGGAAAAATAGGTTAGCATTCCCTGCCATAATTTCACA
GATTTCCTCTGCTTTCTGCTTGAAAACGCTGTCGCATAGCCGGCAGTGGT
CGAATTGAAGTTTGGCAAGATAATATGTGAGTTGACAAAGCAACGATTTG
TAACTTTTACTGATTCTTGAGCGTAGCGTTCAAACTGAAATACAAAATTG
AATGACTAATAAATAAACTGAAAATATGACAATGCGTGAAAATGACTAAG
TATGAAAAATTGACTAAGTATTGAGNNNNNNNNNTTGAGCGTAGCGTTCA
AACTGAAATACAAAATTGAATGACTAATAAATAAACTGAAAATATGACAA
TGCGTGAAAATGACTAAGTATGAAAAATTGACTAAGTGTTGAGCTCATAT
TGATTGATTAAGCAAAAAGTAATTGGAAAAATAAGGCTTGATTGAATAAT
TGAAATTGAAAAAGTTTGAGTAACTAAAAACTAAAAAATGAAAAAATCCA
AGATGGCCGCCAGGACCATGTGCTGAGCTAAACCTAAAGTGACTTGAGGC
AAAGACACACCTGGATGAAAACAAAAGGGATGAGAAGCAAAAGCAAACAA
GAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATA
TCTCTCCAACAATACCAAATTTATAAAGATTGAAGAATTCCTTCAAAAGT
TATAGGTAAAAGAAAAAAGAGTGCACACTTATCGTGAACAGACTTTAGTT
TTTTTACGATTCAACTGATTTAAGTCCACTGTACACGCTTTTTTATAAGA
ACATCCAAAGATTTTGAAGCCTTCTGATGTTCTTAACTTTTTGGGTTTTA
AGCCTAAAAATTTTTTTAAATGTTCTTATTTTAAACGCGTCCACATCAAG
GAAAAGAAAAAGTTTCTTAATAAACATTGAGTTTCATGTATGAAATAAAG
GTCCGAACCAAACGATTTGAATTCGAAATTTTCTTCAACCAGGGGGGGGA
GGGGTGGGTTGAATGAAAAAGTACGTACTTACCAGAAGGTATAGCCATGT
ACGTACGCTTGCGTACAGGGGGAGGGGGTACTCGATTTTCGACATTTTAG
TGCGTACGTACTATGTGGACGGCCCCATATCTAATTTCAGTACCCGTATT
GTAAAAGTATAGCTGAATTTCTTGAATAGTTGTCCGCAATAAGGGTTCAA
AAGTGCAAGAAATTTTTTTCTCTCTCAGTACTTTCTAAACGCTGGTAGAT
TTCAGAATTAAAGACATTAAACTCAAACTCTTGGTTCGAGTCACATTTTT
ATGGTTTTTGTTTTCTTTTTCAGATAAAGAACTCAACAACAAATATCGAC
ATGACTAGTTTTATCAACAATACTACGGTTCGACCAATCACATCAAACCT
AACGACACCATCTTTATTCTACGAACCGCCTCCTTATCCATGCATCTGGC
CTCTGTTCCCGCAATATTCATTCACCAGTCTAACTCTTGCAATTTTGATC
ATAACATTGAATGGTTTTGTCGTTTACCTATTCTTTCGAAACAAAATTCT
ACGCTTGCTGCCAGGAAATTATATCTTAGCAAGTTTAGCGGTTAATGATC
TCCTTAATGGTTTATTCCTTGTTTCCAAACTCTACCCGAATTTTTATCTC
CATAATAATGACTGTTCGAATAATCAACAAAAGTTTTTGAAAGCCGAATT
TCCAACAATAAGTAATACAATTTATCTTTTATTAATGTTATCTTCAATCC
TTCATTTGGTGTTATTATCAACCGATCGACTGATATACATCATTCATGCT
TTAACATATAACTCTATAGTCACCAAACGAAAGATGTTAAAAATCTTAGC
AATCACTTGGTTACTTTGCGGTATCTTCGCTGCCCTTAAGTTCCTGTGGA
GTCTCAAAAGTGGACCTTTAAATCCATATCGGAAATCAATCAAGATCTAC
GCTGCAATCACCATAGCTGTTTTATTCATCGGCCTTCCGTCTATAATTCT
ACTTATCCAGTCTATCATTATGGTGTTAATGGTACGCAGGCTAGACAATA
AAAGTAGCCCGGATCCTAATAAACGAACGGGAGGTTGTAAAGCGTTTGTA
CTGTACATGTTTATGTATTTAAAGTTCATGGTTTTTGCGTACCCCTATCT
GATTATCATGTTGATGTTTCAATTCGGTGCATTTGAGCCTCCTCTTATTG
CACCGTCAATGAACGCCATTGTTATTTGTACCGTTATTCGGTTTGTACCT
TGTCTCGTTAACCCATGTTTATACAGCTTACAAAATAAAGATTTTAGGAA
AGTTATCAAGACTTATTTGAAATATTGTCGGAAAACTTCGCAGAGTTATG
CAATGGTTAGGAAAACGGGAGCCTCGAATTATTTGGGGACACTCTCGCCT
CAGACAAATCTTTATAAAATGAACGGTGATTCTACGGAAGAAAGTTTGGT
CAATTTATGAAATGAAAACTCTTACATGATGAATTAAATAATAAACTACC
TAACATCCAACAGTTGATTGATTGTAAGTTGTAAGTGGGTTTGTTGGCTG
TTGGGTTTTGCCACTCGTTATTTAATATTTTTCAAATTTGAAGTCAAACA
GTTGTACATTTATTAAAGTCAGTCTTGATATAATCTGCA

Coding sequence (CDS) from alignment at scaffold_433:305351..314739-

>TCONS_00065204 ID=TCONS_00065204|Name=TCONS_00065204|organism=Clytia hemisphaerica|type=CDS|length=1110bp|location=Sequence derived from alignment at scaffold_433:305351..314739- (Clytia hemisphaerica)
ATGACTAGTTTTATCAACAATACTACGGTTCGACCAATCACATCAAACCT
AACGACACCATCTTTATTCTACGAACCGCCTCCTTATCCATGCATCTGGC
CTCTGTTCCCGCAATATTCATTCACCAGTCTAACTCTTGCAATTTTGATC
ATAACATTGAATGGTTTTGTCGTTTACCTATTCTTTCGAAACAAAATTCT
ACGCTTGCTGCCAGGAAATTATATCTTAGCAAGTTTAGCGGTTAATGATC
TCCTTAATGGTTTATTCCTTGTTTCCAAACTCTACCCGAATTTTTATCTC
CATAATAATGACTGTTCGAATAATCAACAAAAGTTTTTGAAAGCCGAATT
TCCAACAATAAGTAATACAATTTATCTTTTATTAATGTTATCTTCAATCC
TTCATTTGGTGTTATTATCAACCGATCGACTGATATACATCATTCATGCT
TTAACATATAACTCTATAGTCACCAAACGAAAGATGTTAAAAATCTTAGC
AATCACTTGGTTACTTTGCGGTATCTTCGCTGCCCTTAAGTTCCTGTGGA
GTCTCAAAAGTGGACCTTTAAATCCATATCGGAAATCAATCAAGATCTAC
GCTGCAATCACCATAGCTGTTTTATTCATCGGCCTTCCGTCTATAATTCT
ACTTATCCAGTCTATCATTATGGTGTTAATGGTACGCAGGCTAGACAATA
AAAGTAGCCCGGATCCTAATAAACGAACGGGAGGTTGTAAAGCGTTTGTA
CTGTACATGTTTATGTATTTAAAGTTCATGGTTTTTGCGTACCCCTATCT
GATTATCATGTTGATGTTTCAATTCGGTGCATTTGAGCCTCCTCTTATTG
CACCGTCAATGAACGCCATTGTTATTTGTACCGTTATTCGGTTTGTACCT
TGTCTCGTTAACCCATGTTTATACAGCTTACAAAATAAAGATTTTAGGAA
AGTTATCAAGACTTATTTGAAATATTGTCGGAAAACTTCGCAGAGTTATG
CAATGGTTAGGAAAACGGGAGCCTCGAATTATTTGGGGACACTCTCGCCT
CAGACAAATCTTTATAAAATGAACGGTGATTCTACGGAAGAAAGTTTGGT
CAATTTATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040880XLOC_040880Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065204-proteinTCONS_00065204-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065204-exon-scaffold_433-1575043694:314674..314739TCONS_00065204-exon-scaffold_433-1575043694:314674..314739Clytia hemisphaericaexon
TCONS_00065204-exon-scaffold_433-1575043694:305351..306666TCONS_00065204-exon-scaffold_433-1575043694:305351..306666Clytia hemisphaericaexon
TCONS_00065204-exon-scaffold_433-1510915933:314674..314739TCONS_00065204-exon-scaffold_433-1510915933:314674..314739Clytia hemisphaericaexon
TCONS_00065204-exon-scaffold_433-1510915933:305351..306666TCONS_00065204-exon-scaffold_433-1510915933:305351..306666Clytia hemisphaericaexon
TCONS_00065204-exon-scaffold_433-1491911889:314674..314739TCONS_00065204-exon-scaffold_433-1491911889:314674..314739Clytia hemisphaericaexon
TCONS_00065204-exon-scaffold_433-1491911889:305351..306666TCONS_00065204-exon-scaffold_433-1491911889:305351..306666Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_433supercontigscaffold_433:305351..314739 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0907359	0.0589879	0.0684906	0.0335037	0.244725	0.0966925	0.194426	0.254826	0.305846	0.18942	0.12257	0.282005	1.26726	0.793814	0.223266	0.479197	0.0908201	0.302535	2.57211	2.32145	0.4094	0.342328	0.208072	0.283752	0.357203	0.40574	0.124417	0.132781	0.0335699	0.410429
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065204 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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