TCONS_00000172 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000172
Unique NameTCONS_00000172
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1241

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000172 ID=TCONS_00000172|Name=TCONS_00000172|organism=Clytia hemisphaerica|type=transcript|length=1241bp
GTTGATGATTACCATAATCTtcaccttttgtgacctacccccttgtaatt
ccaggcaattttaggatcatacccctctggaattccgaatttttacaaat
tttcaatcattacccccttggaattccgcttatttttgacggattttcta
CCCTTATgaaattccactgcatttcaaaccttacccccttggaacggaaa
tggacctcctcaacagggggtgtacgattttttttctggaaaagcccatt
attgGTGTGATATTGAAATTTGTCACCTTTATCATTTTTCTAGAGATAAC
AGTGGGAAACGGTTGATGGATTATCTGTTTCTGATACCAAAGGTGTCTGG
AAATATCGTTGAccatttcaaaattattgaagATGGTTTCCATATCAATA
CAGCTGATCACCAGgAATCATCAACATGTTCGTCAGTAATTCAAGTGACG
AATAATTTTCGTTTCCTCGATAAACATCGAATCAAAACGACAACAACTCC
GCCGAACAAAAACGATGTTAAAACAAATAGTGATATATCGTTTCGATATG
gTCAAATCTTGATATGCAAAGTGTACCTTGGAAAATCATGTGCCGTAAAT
AATGATAAAAGATTGGCAGAGAGCCTTTATCCAGGACATCAATCAGTATA
TCGTACCAAGAAACATTTAGCTACAAGTTGTCCTTCAAAAGTCAAGAAAT
CACTATCTACTTCGGCTACCCCTCAAGAATATTGTGAGTGTACTGCTCGC
AAATGTGTTTGGTATTTGTTCGATCCTGATTTGGTATTACCGGAATATAT
TGTCGACTTTGAATATCTTTCAACGGTCACTCCACCAATGATGTCGGTGT
TTTCAGAACTATCGAAACCTACAATGTCAGAAGAGATTCGACAACAAAGA
TTTACTGAAATGTGCACAAAGAAACCAGAAGAGGACACGACAGATAACAA
TGTCTTGAATTTGGAACCGATCATCGCTTCAAGGCCAAGgTTGACCTTCT
TGACGGAAGAAATGATACTGAAACAGTCTGGGCAAACCTACTTGAACAAA
ATCACGGAGTTAAATCTACACGGTTGTGGGTTAACTAAAGGGAAAATGTT
ATCTTCGCTAAGCAATATCAAGAAGCTTGTCCTGTCCTTCAACGAACTGA
CCACTATGGCTGATCTCGGTGGAAATTCCACTTTGGAGTACTTGGATGTC
AGTTACAATCAAATTACTGGTATGGAAGGATTCAAAGTAAG
Run BLAST on NCBI

protein sequence of TCONS_00000172-protein

>TCONS_00000172-protein ID=TCONS_00000172-protein|Name=TCONS_00000172-protein|organism=Clytia hemisphaerica|type=polypeptide|length=308bp
MDYLFLIPKVSGNIVDHFKIIEDGFHINTADHQESSTCSSVIQVTNNFRF
LDKHRIKTTTTPPNKNDVKTNSDISFRYGQILICKVYLGKSCAVNNDKRL
AESLYPGHQSVYRTKKHLATSCPSKVKKSLSTSATPQEYCECTARKCVWY
LFDPDLVLPEYIVDFEYLSTVTPPMMSVFSELSKPTMSEEIRQQRFTEMC
TKKPEEDTTDNNVLNLEPIIASRPRLTFLTEEMILKQSGQTYLNKITELN
LHGCGLTKGKMLSSLSNIKKLVLSFNELTTMADLGGNSTLEYLDVSYNQI
TGMEGFKV
Run BLAST on NCBI

transcript from alignment at sc0000001:679224..692480-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000172 ID=TCONS_00000172|Name=TCONS_00000172|organism=Clytia hemisphaerica|type=transcript|length=13257bp|location=Sequence derived from alignment at sc0000001:679224..692480- (Clytia hemisphaerica)
GTTGATGATTACCATAATCTTCACCTTTTGTGACCTACCCCCTTGTAATT
CCAGGCAATTTTAGGATCATACCCCTCTGGAATTCCGAATTTTTACAAAT
TTTCAATCATTACCCCCTTGGAATTCCGCTTATTTTTGACGGATTTTCTA
CCCTTATGAAATTCCACTGCATTTCAAACCTTACCCCCTTGGAACGGAAA
TGGACCTCCTCAACAGGGGGTGTACGATTTTTTTTCTGGAAAAGCCCATT
ATTGGTGTGATATTGAAATTTGTCACCTTTATCATTTTTCTAGAGATAAC
AGTGGGAAACGGTTGATGGATTATCTGTTTCTGATACCAAAGGTGTCTGG
AAATATCGTTGACCATTTCAAAATTATTGAAGATGGTTTCCATATCAATA
CAGCTGATCACCAGGTGAGAGCGAGTTTATGTATTTTCGCTTTTGAGGAC
GGTAAAGTGACTGAAGCGATTTGGAAAAATCCGCACTTCTGACCTGAAAA
ATTGAGAACGGTAAAAAAGTGCTGATTTACCGTCGTCCTCAGTCTAAAGA
TACTACTACAGTGGACTTTCACTAAGGCGAGACCAATTTAATTTGTTGTT
CTACGAGCCCGACCGACCCTATTTTTGCTAAAATCAAAAAAATAATGATA
TTAAATTTCAACTACAATATATTTTACACACTAGCTATTTGTAAGAATTA
AATTTGAATAAAGCTGAAAATTAATTCAAGAAATTTAAAAATTCAGAAAA
TCAAGCATTCCATATCCTAAAATTTTATTATTATGATCTTCATACCATAC
CTGATGAATGAAAAATTTATTCTTATTTTACCGACCGACCCATATTTGTC
TAACGATCTGCCCGTAGAACTCGAATCTTTTTTATAATTCGAACTAATTT
TTAGTTCAAGTCATAGGGAAACTTTCGTAAAATACTCTCTACTATTCGAG
TGTCTCTGTATTTGAAACAGAATGGGTTTCCCGCTCGAATTCGATATAGC
GTGAGTTAACTGTATGCACTTCCAAGCATTATCGTGGCAGCAGATATCGT
GTTTTTTTTTACCAACTAGACTAGATAGGGTAATTAGTGAGGGCTATTTT
GAAGTGTTTTCAATGAAACGAGGGGTTATTAATCCAAAATCACCCGAGAA
TACCATGTTATTCCGCGTTAATTGTATGGACTGACACTCTTATTTTGATT
GGCTTAAAAATTTCGTACGATATTTTGTTAACCAATAAAAATATCGTACA
ATACTTTTCTTTCAACCAATAGAAATTTTTGTTTACATCAGGGCGATTAC
AAAAAAGCGGGGCTATTACGGATTTATCGCCCGCTCGTCCTTTACAAATC
TAAGCTAAATGTAATCAACCATATAATTACTTAAGATATCCCGTGGAAGT
GTGACCAACTTTCAAGTTGGCTAGTTCGCCATCACAGCTGGCACACAACG
TTGTTTCAACGTTTATGTAACGTTCACAACGTCCATTTAACGTTAGATTA
ACGTTGAAACAACGTTGTGTGCCAGCTGGGATATCACTGAATTCTTGGTT
CATTCATAGTCATTATAAAAAACCCCGGCCTAGCAATTTATTTCTTTAGG
TTTTTGTTCAATTTTCTTTTGTTACAAACAAAAGACAAGTTGTGATTTGC
ATACTTTTTTATCACGTTACCAAAATCTCTTCTTGGGATTGGTCTATTTT
CTAATCACATGATCAAAATGTTTGCAAAATAAATCGATTTTTGTCACGTA
AGCTCCATCTTTTAACAATAAAAGGAGACAAAAGCCTTCCAGACCAGTGT
TTTTATAATGACTATGGTTCATTCAAATCATTCGAATCCCGTAGAGGTCG
TCATGCAGAACAAAAAACAGCAATACGGATTGCCATGCTATACATACAAG
AAGTTGTTTGTTCATCTTATAATAGCCTGTACCACCCCGCCGCCACGGGC
GTTTTCATATTTTGAAAAAAAACTTACCGTAGGTCGGTCTGTTACGATTA
GCGAGATTCTTTGTCTCAGTTTGTCCCAAAATCCTAAAAAAACGTAGCGA
GTAGGAGTGCTCTTTTGAAAATTGAAAGATACCATTACATTCGAAGTTGA
GCTAGATTGAATGCTAAAAATAGCTACGTTCCATCGCATAGACCTTCCGA
GTTTTTCGTAAAAAAGTCTGAGACACGGAAAATTGTCTAACCGTAACAAA
CCGAACTTTGCGTTTCTTTTCAGTCAGCGAAAAAGTTTCTGGTACAGGCT
GGTCTTACAAAAGCAATACAATGATCCTAATACTTGATCCTTCAAAAATG
TTGACCATTCGTGTCGGTTCAATTTAGAAATTGTTCACTTAGCTTCAAAA
TGATGTCCCTTAAAATGTTTCAAAACATTCTTCTTTTTCTTCATAGGAAT
CATCAACATGTTCGTCAGTAATTCAAGTGACGAATAATTTTCGTTTCCTC
GATAAACATCGAATCAAAACGACAACAACTCCGCCGAACAAAAACGATGT
TAAAACAAATAGTGATATATCGTTTCGATATGGTAAGAAAAACTTAATTT
TTTTTACATTTTCTTTTTGAAAAACAAACCCTGCTTCGACTGTCTTGAAA
CTCGTAAGATATTTCACTCAAGGTCATGCAATATTACTAGCACTATGACA
TGGAACATGGTATTAGGTACACCCTAAGAAAATAGTAACCTCCTGAATTT
TAGGTAACCCAAATAATAGACGTTAGTAGGTACGTCGTATGTCGTTTGTA
CACTCTTTGACCAAAGTAATTTTTTAGGTACCACTCCCTAAATATAGTTG
AATTTTTTTATGTTGTATACGGAGAAAATAAAATATTATGTACTTGGGCT
ACCTTATCGGCCAAAACTTAGTCGGCCTTAATTTTAGTCAGCCTTTATTA
TTAGTCGGCCCTAATTTTAGTCACCAAGCCAAAATTTGGTCACTTAGGGC
CGACTAAGTTTTGGCCGATAAGGTAGTTGCGAAGCCGAGTTGAATATACA
TCACCGAGGGTTAATAAATCCAATAACCAACGAAAACCTACTTTAATATA
TGTTTTATTATATACCTAGAGGCAAAAAAAAGCATAAATTATGCAAGTAG
TCGAATGAGTCACATAAAACACTCTCATAATAGAACGTTCGAATGTTTTT
CTTTTTTAACGATTTTCTTAATAACTTTGAGTCATAAAATTTGTTCATGA
AATTGACAATAGATTTATTCTAATAAATTTATTTAATGAACAACAATAGC
GACAAAAAAATCGAATTTTGAAAGCAAAATCAAAAAGAAAATTCTACCGT
TGTATAATTGCCGTGGTATATCAGGAATTATTCAATGGCTGTTTTTGCCT
ACATCTATATATTAATAGCGGTAGTCTGTATGTCGTTTTGTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTCGCGCCGTTTTATAAAGACTTTGTTTTGATTGATAG
ATTAGACTTTTTCTTTTTTTTCTTTCTTTTCTTTTGTTTTATGTTTTCGA
ATGTAAAGTAATTTTTAAACGACCTTATTTGATTTGAGACATTCGAATTC
TTTTCAAAACAAAAGAAAATCTTTTAAAAAGAATCTGTTATGTTAAAGAA
AAGAACAAATATAAAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCCAATTTCCCACTGTAATTTTTTTGAGGCCAAAATCGGACTCACAGC
TCTGACCCGTCAAGTATTCATCAGATTTAAAAAAATACGCAGACGGGTTC
CTGTCTACGTAAAAAGGGACCTTTAAACATGTATGTCGATAATTATTCTG
CTGTAAATCATTGTTGAATTTGAAAAATTACTGAAGTTATGACGAAGCTA
TTTTATAAAAAACAACATAAAATTGCGCTATCACGCTTTTTTGTCTGCGT
GTCCTAGCTGCCTTCCGGGGGGACTATGGTTGCGAGCTGACTTTCGGCCC
TGCCCCTCGGACCCTTAGCAGAATAAAGAGGAGAAGAAACAAGGGAAATT
GTGTGAATTTTAATTCACTTTTTGGAACTAATTTGACCATATTTCTATCT
TTCTGGGGGCAAAAAGTTGAAATTTTCCTATTTTTCCAATTATTAGTGGG
ACTGAAGTTTGATTTTCCGACTTTTCAAACTGCCATGTTTCAAAAAAGGC
ACCTTTAAGGCCGGCACATACCCTTCTCTTGCCTAAGTACCCCCTCCCCC
GGGCTGCCTCTTTTCGAAGAATCGCGTGTCATGTCTATTATTTCACTCCG
CTTATCTTGACATCAAAGTTTTCCTAAGCATCAAGAACTACGGCAAATAT
AACGAGCGAAGCGAGAAAAAAATCCAATTGCAGAGCCGTCTCGGACGTCG
CTGGTCGCCGGTATGGTGTAATTTGGGAATGACGCCCTTTCTGTATTCTG
ATTATTTTTGCCACAAAAATCTTTTTCAAAATATGGTTAAAAGATACGTC
ACCCGGGAGGGATAGAGTCAAACTTTGAAGAGAATTCTTCCCAACATCTC
AAAGGACTTTAAATGCGTTCAGTAAACAGCTAAACCGGCGTGCGACGCCG
GGTACCGGCTAGTATGTATATAATAATATGACTAAAATGATCTTCATCTT
CATTTTTCATTGATCTTTTAAACAATTTTTTTTACATTTAGGTCAAATCT
TGATATGCAAAGTGTACCTTGGAAAATCATGTGCCGTAAATAATGATAAA
AGGTGAAAATTCAACATTTTTAAACATTGGGCTGTTCCATTTAAAATCAA
TACAGGGGGTTGAACGAACTTTTCTCAGCCAAAAACAATTCTCGAAAATG
TCGGGATAACCACCTAGAAAATAGAAGAATTTGCAAAAAGACTTTTGGAT
AATCTTTTTATACTTTCAAAAGAGGGCGGAAGAACTAAAAATCTGTTTTT
ATCTCCCTGAAATCTTACAGAATAACATTTTACCCTCTGGAAAAATAAAA
AAAACTTAAACCCCGTCTAATCGTCTTTGGATTTCCCCCTGGAATGGAGA
TAAAAAGTAGAATGGCCCTTTTCCCAGTGAGTCAAAAATTCTAGAAATAT
TCGCTTTTTATATGAGAATAATTTTGTAAGAGCCATAGGCATAATTTTGG
CCAAAACCTAAGAAGATAAAGTACTTTTAAAGGTTTTATTTTTAAATAAG
AGTGATATAGTTTACTAATCATCAATTTTAAATTTACAAGCCTTTTCACA
TTGAATCGACACGGATGTGGAGCAAGATTGGTCAGAAAGAGGAAAAAACA
AATATTTTTTTTGTTTATTTAGTACAGGGCTTTTCCAGAAAAAAATTAAC
CCCACTGTTGAGGATATTGATTTTTCGAAGTATCGAACCCCCTGAATATC
CTACTTTATTAGTAAAGACCCCCTGGATATCCACTTTTAAAAATATGCTC
AACCCCCTGGATATCCTCTCTTATAAAGATGCTTACCCCTGAATATCATA
TTTTTTTACTTGGAAAGACACTTTACCCCTGGATATCCACTTTTGAATAA
AAATCGTTAACCCCCTGGATATCTGATATCCTCAACAGGGAGGCACGGAC
CAATATAACATTAAGGAGACACTACCCTGATTTGAAACATGTATCTGATA
TGAAACAGGGACACTTATGTAAGAATAAAACCTTTAAGCCTTAGAATCAT
GGAAAAATAAGAACCTCAAACTAAGAGGAATTCATTATATTGAATAACTA
GGTTCAAACCCATGCAACAAAAAGAAACTTCTGCGTTATTTCGCATTAAA
AGAGTTATTTTCCACTAGGATAGTATTACATTCCTTCCCTTACACGTAAA
ATAATACTCCGTAGCAGAGGGTAACTCACGTCTAACGTAGCAATGAACTT
AGCTTATTACACGAATATTACTAGGCAAGTATTCAACGGCCTTGAATTTA
ACACTCTAAAAATTAACATGAATTTTATTGCTTTTTCAAGGACACCATGG
CTGGTTTTAATTAAGGGGGTTTTTATTAACACGAAATTTTTCTATTCGTG
TTAATAAAATGAGTAGTAATATTCGTGTAATAACTAATACAGTATATGGC
CCCCAAAACGGAGNAGGGAAAAGAGTGGCGCTCTCCCCTACCTTCGGGTA
GACAGCTATAAAAAAAGGGAGCCCGGGGGGGGGGGTACTTAGGCAAATGG
ATGGTACGGTATGTGCCGCCCTTAAGGGTACCTTTTTTGGACTTCCAAAG
TCTTGCTAAGGGTCGGAAAAAATCAGAAAATCAAATTTCAGTCCCACTAA
GGGACTTTCAACTTTTTACCCCCTGAAAGATCGAAATTTGGTCAAAATTG
GTCAAATTAGTCCCGCCAAGGGTCATAAAATTCACAAAACTTTCCTTGGT
TTTCTCTTTTTTTAGTCCCGGTAAGGGTCCAAAGTTCGAAAGTCGGGCGG
CACCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGCCGCCCC
CCCCCCCCCCGTCAGCTCGCAACGCTAGTACCCCCTCCCCCGGGTAAGGG
AGTCTGATTCACAGATCTGTAGATATAATTTCCTATACAGCAGTAGAGGC
TCTTTAACACGAACCTCAATTAATCGAATATCCCCTTAACTCGAACAAGT
TTTCAAGTCCATTCAGTGCCTTTAAAGTCTTGCTCCATATCTCGAAATTT
CCTGTACAGTACAGTCTCTTTAGCTCGAACCTCTATAACTTTTTCTAGTC
CTTTGACTATGTTCAGACATTACGGTTCCGTTCCGAAACGGTTCCGAAAC
AAGTGGGAACGTCAAAATTCGAAACGTCAAAAAAGAAGACGTTACAAAGC
AAAACAGATCGAAACGGTTTCGCTCCNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTGCTCCGTTTTCTTGCTCCGAAACGTTCCGAAACCAATATGAAC
ACACTCGATCCGTAACGAAAATCATACCGGAGCGAAACGGAACAGTAACA
TGTGAACATGATCTTAGTTAACAATATTTTGTTTTAAGTTACGTAATTTC
CACCATTATGGAAGCAAACATTCGATTTGTGATTTAAGTGTTCGCCTCCA
CAGATTCGAACGATTGCTTCCATAATGGTGGAAATTACGTAACTTTAAAA
AATATGAAAAGTCTCTATACGTAAAAAGTACCGTCAAAATTTTTTTTTCC
GGTTTTAAGATTGGCAGAGAGCCTTTATCCAGGACATCAATCAGTATATC
GTACCAAGAAACATTTAGCTACAAGTTGTCCTTCAAAAGTCAAGAAATCA
CTATCTACTTCGGCTACCCCTCAAGAATATTGTGAGTGTACTGCTCGCAA
ATGTGTTTGGTATTTGTTCGATCCTGATTTGGTATTACCGGAATATATTG
TCGACTTTGAATATCTTTCAACGGTAAGTTTTAATGCGGTAAAAGTTTCA
ATAGAAATATCTCAGATTTGAGTTTGGATAAGTGAGACATCGTTTAATAT
TTTGAGCCTATTGCGAGTGGGGGGCAGGGGTCATGAGGGTAGAGGAGACA
GGGTAATAAAACTTTCCCAGGGCCCGCGCCATGAAATTGAAAGTGGGGGG
GGGGCAATAAATATAGAGTCTAAGGAGGCGCAACCAAAAATCTTTACTTT
GCAAAAAAGTGGGGCCTCCCCCCACCTCCGCTTTGGACATTCAGGATAAT
TTTATCAGGGTTATATATTTACTATCTGAAAAACGTCAATAAAAAAACGT
CAAACAAATTCCTCTTCTCTTCTTCATCAACAACAGGTCACTCCACCAAT
GATGTCGGTGTTTTCAGAACTATCGAAACCTACAATGTCAGAAGAGATTC
GACAACAAAGATTTACTGAAATGTGCACAAAGAAACCAGAAGAGGACACG
ACAGATAACAATGTCTTGAATTTGGAACCGATCATCGCTTCAAGGCCAAG
GTAGGGTTTGAATATTTTGTTGGAAAACACGTTTTTTTGTAAGAACAAAG
TATATAGGATCATAAGGCTTTGATGGTCATAATATTAAGAACAAGTATTG
GTTAGAAGAACCAGAAAGGTTGCATAAGTTCGATTGCCATGGCAATGGTG
TAGTCACATGAACGGATTTTGAATTCCTCCCAAAAGCAGTTCTTTCTTTG
CTGGACAGCTTTTTTTAGAATCGTGGATATTCTTAACTTTTTTGGGGAAA
ATCCTCCTGAAATATTCTTACGGTATTCTTAGGATTCTTAGGATCCAAAG
TTAACCTAAATCTAATATGCAAAAAATTCGACATTTTTATGAAATTTATA
AGCCTTGAATGACAATTTACAGGTAAAATGCTCTGAAAATGGAACTGTTA
GGTTCAGTTGCATCAATTCCATGTTGATGTTATTCTTAGGATATTCTTAT
TTTTTGGCAAATTTCATCATGAATATTCTTATATAAAAGTATATCCTTGT
AAAGAAAAAAAGTGTGTATCTGTTCCAGAAACTTTAGGCTGTTGGTATTC
TCTAACGTATGCTTGTGATCCAGCCTGCATTCATTTACTTTATGACATTT
GGTTTTTCTCTCCGGGTCTATTGACTACTGGATTTATGAACCGCCTACTT
TACTTATTATCCATAAAATGTAAATGATCTAGAAAATTTTCAATACTTTG
AACTCTATTCACCAATAACCGTATTACTTCGAATAAACACCCCCTTCTTT
TAAAGGCCCTCTTGAATAAGCGCCCCTCCTGAAATCCAAAAAAAATAATA
AACGCCCAGGGCGGTATATTAACCTCATAGAGTGCAATATGATTTGATAG
AGCAGTATTATAATGAGAGTTGGACTGAATTCTTATTTTTCATACTCGGA
ATTTCAAGTTTATTTAGATAGAAATTTGTGTAATCTGATAGAACACTTGT
ATTATTATAAGCTTGAGAATGGTGATACCACCGAAATATATTGCTTGACT
GTTTTTAAATTTTAAACTTTGAAAAATGGCTTCAAATTTATTAACATAAA
TTTATTAACATTTTTATACTATATTTATATAAATTGTTTTTTGTTTTTTT
TTGTTTTGTTTTTTCAGGTTGACCTTCTTGACGGAAGAAATGATACTGAA
ACAGTCTGGGCAAACCTACTTGAACAAAATCACGGTTGGTGAAACTTATT
ATGATAAGAAACAAATAATCTTCATTTCAAGTTTTTTGGCAGACCCCTGA
AATCTTTAAGAAGAGGGAGGGGAATTCAAATTATATTTTTCAATTAACCA
ACAACGAGCAATTATTTTATTTTTTGACGATATATTTCGATCTATTGATC
ATCTTCAGGTCTAAAATTCAATAAAAACAAGATTANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT
TTAGCGTACCGTCGTAGAGCAAGTTTGCGCAAACTTCAATGGCTTCGTCG
ACTGGAACATTCGTATATAATGAGACAACATCAAAACTGACCATCTCTTT
GTCATCTTGCAGGACAATATCAGCTAACTGGTCAGCAATTTCTTTTGTAG
ATGAGTTGATTTTGCATTCTGGAACAGCAGATAACCAGTTTTCAAATTTC
AAATTATGCAGTGCTATTTTGTGTCAGACAGATTTACACCTTATCGAACA
TTCACAAAGACATTTCAGTGCCGTAGGAAGCATTTTCATATTGGGGGGGG
AGGGCTGAAGTTTAGTGACACCATAGTTTGGCCCGAGGGGGGAAATTTTG
AAAATTTGAGCTCTAGATTGCTTAAAAATACACTCAAAACATACACATAA
AGGCAATTATGACACATTAAAAAAGCAAAACTTTGCATTCTGCAAAATAA
CCATTTTTGAAAAAATTATTGGGGGGGGGGCATAGCCCCCCTCTGCCCCC
CAGTTGCTACGGCACTGCATTTACGTCTCAAAATTCAGCAAAATTAGTTG
TCCGTTTGGAAAGTCCCATAATTTCGCATTGATCACTGGAGCTTAGCCTG
TACCATGCAGTCACTAGCCTATCTCTATCTCAACACGCGTTTTTTTTATT
ACTCTCATCACAGCCTTTTCCCGATAATTTTTCAATTAATCTAAATAAGT
TTGCGTTTATCGAACCAGTGATATTGGAAGTTTATGGTGGCTTGGATCAC
GTTTGGCTACGTTTTGAGAGATTCCTCTCCCATCATTGGGCAATGTGGAG
GATGTTTTCCCCACTATTTGTACTAATAGACCTTCTGATTACCCATAATT
ATCAAGTGTAATTTCCTTCCAAGGTGTGAACCTTGTTATCATAGGTGATG
AATGACGTGAGTGAAGGTAGAGAGTCTATAACCATATTTCCCTAACACCC
TGCCTGGAGCAGAGCAGAGCTTGGGATTCAAACATAGTCCATTGCGTTGA
AAGTCTGTGATCGAAACCTTCACACTACCAATCGGCTAAATCGGATAAAT
CAGGTGTTCGATTTAGGAATAGATTAACTGAAATCACGAGCTTACCTCAA
ATCTCTACCTACAAGGAATTGTTCTTTTGTAGGAGTTAAATCTACACGGT
TGTGGGTTAACTAAAGGGAAAATGTTATCTTCGCTAAGCAATATCAAGAA
GCTTGTCCTGTCCTTCAACGAACTGACCACTATGGCTGATCTCGGTGGAA
ATGTAAGTTCGAGTGTTTATAATGCCCCCGATTTCATTTCAATTTTTTTT
TCCTTAATCATATATTTCTATTACAAAATGAAAAATTCAGAGTTTCATCA
GATTTATCATCTTTTTACATCTGACGATTGCTGAGAGCATGAAACTCTGG
GTAATGTAAAATTTTCAATTTGTCACAGAAATATATGATTTCAATGAAAG
CTCTATCTTTGATATCGAGCACTTTTTGGTGTTGATTTCTTTACCAAACA
AATAATGAAATCCTTTTTGTTCTACAAAAGCCTTGTAGCAAATTCATTCT
CTGTAGAAAACTCATTTGAAAGTGTCGATTCAACTGTGATTCACTTGGTA
AGTGAATATACCTTCGCCCGGGTCAATCTGGGTACACCGACACTCTGATA
CACGAGTATCAGTTGTGTTGAAGTTTTTATAAGATGCTCACATAATTGGT
TATTCAAAATAATAGAGATGACGCGTTCTTTAGAAAAATATAATAAAAGT
TTTTGTTTGAATAGTTAACGACCAATCCAATGACAAAAATTCTTGTAAAA
TGTTCAGCTTGACCCACGAGTATGGGGAGATACACCTAGTACTGTGTGGT
TTTTGTAAGATTCGACCATACGAAGATGCTCCGTCATCCTGAGTCGTTCG
TGTATAGTTACTGTACACCAAGAGCTCTGTATGTCGGATGCACGTGTTGG
CAAAGTCAGGTAATTTCCCGCAGTGATTTCCATATCCTAAGAAAGAGAAT
GCTGTTCTGGATAGGGCATCTTTCGTTTATCGGTAGGATAATCTCTCTAT
CTATGTTATAATAATTCTTTCTCTCCCTCCTTTTTTTCCCAGTCCACTTT
GGAGTACTTGGATGTCAGTTACAATCAAATTACTGGTATGGAAGGATTCA
AAGTAAG

Coding sequence (CDS) from alignment at sc0000001:679224..692480-

>TCONS_00000172 ID=TCONS_00000172|Name=TCONS_00000172|organism=Clytia hemisphaerica|type=CDS|length=7392bp|location=Sequence derived from alignment at sc0000001:679224..692480- (Clytia hemisphaerica)
TCCACTTTGGAGTACTTGGATGTCAGTTACAATCAAATTACTGGTATGGA
AGGATTCAAAGTAGAGTTAAATCTACACGGTTGTGGGTTAACTAAAGGGA
AAATGTTATCTTCGCTAAGCAATATCAAGAAGCTTGTCCTGTCCTTCAAC
GAACTGACCACTATGGCTGATCTCGGTGGAAATGTTGACCTTCTTGACGG
AAGAAATGATACTGAAACAGTCTGGGCAAACCTACTTGAACAAAATCACG
GTCACTCCACCAATGATGTCGGTGTTTTCAGAACTATCGAAACCTACAAT
GTCAGAAGAGATTCGACAACAAAGATTTACTGAAATGTGCACAAAGAAAC
CAGAAGAGGACACGACAGATAACAATGTCTTGAATTTGGAACCGATCATC
GCTTCAAGGCCAAGATTGGCAGAGAGCCTTTATCCAGGACATCAATCAGT
ATATCGTACCAAGAAACATTTAGCTACAAGTTGTCCTTCAAAAGTCAAGA
AATCACTATCTACTTCGGCTACCCCTCAAGAATATTGTGAGTGTACTGCT
CGCAAATGTGTTTGGTATTTGTTCGATCCTGATTTGGTATTACCGGAATA
TATTGTCGACTTTGAATATCTTTCAACGGTCAAATCTTGATATGCAAAGT
GTACCTTGGAAAATCATGTGCCGTAAATAATGATAAAAGGAATCATCAAC
ATGTTCGTCAGTAATTCAAGTGACGAATAATTTTCGTTTCCTCGATAAAC
ATCGAATCAAAACGACAACAACTCCGCCGAACAAAAACGATGTTAAAACA
AATAGTGATATATCGTTTCGATATGATGGATTATCTGTTTCTGATACCAA
AGGTGTCTGGAAATATCGTTGACCATTTCAAAATTATTGAAGATGGTTTC
CATATCAATACAGCTGATCACCAGTCCACTTTGGAGTACTTGGATGTCAG
TTACAATCAAATTACTGGTATGGAAGGATTCAAAGTAGAGTTAAATCTAC
ACGGTTGTGGGTTAACTAAAGGGAAAATGTTATCTTCGCTAAGCAATATC
AAGAAGCTTGTCCTGTCCTTCAACGAACTGACCACTATGGCTGATCTCGG
TGGAAATGTTGACCTTCTTGACGGAAGAAATGATACTGAAACAGTCTGGG
CAAACCTACTTGAACAAAATCACGGTCACTCCACCAATGATGTCGGTGTT
TTCAGAACTATCGAAACCTACAATGTCAGAAGAGATTCGACAACAAAGAT
TTACTGAAATGTGCACAAAGAAACCAGAAGAGGACACGACAGATAACAAT
GTCTTGAATTTGGAACCGATCATCGCTTCAAGGCCAAGATTGGCAGAGAG
CCTTTATCCAGGACATCAATCAGTATATCGTACCAAGAAACATTTAGCTA
CAAGTTGTCCTTCAAAAGTCAAGAAATCACTATCTACTTCGGCTACCCCT
CAAGAATATTGTGAGTGTACTGCTCGCAAATGTGTTTGGTATTTGTTCGA
TCCTGATTTGGTATTACCGGAATATATTGTCGACTTTGAATATCTTTCAA
CGGTCAAATCTTGATATGCAAAGTGTACCTTGGAAAATCATGTGCCGTAA
ATAATGATAAAAGGAATCATCAACATGTTCGTCAGTAATTCAAGTGACGA
ATAATTTTCGTTTCCTCGATAAACATCGAATCAAAACGACAACAACTCCG
CCGAACAAAAACGATGTTAAAACAAATAGTGATATATCGTTTCGATATGA
TGGATTATCTGTTTCTGATACCAAAGGTGTCTGGAAATATCGTTGACCAT
TTCAAAATTATTGAAGATGGTTTCCATATCAATACAGCTGATCACCAGTC
CACTTTGGAGTACTTGGATGTCAGTTACAATCAAATTACTGGTATGGAAG
GATTCAAAGTAGAGTTAAATCTACACGGTTGTGGGTTAACTAAAGGGAAA
ATGTTATCTTCGCTAAGCAATATCAAGAAGCTTGTCCTGTCCTTCAACGA
ACTGACCACTATGGCTGATCTCGGTGGAAATGTTGACCTTCTTGACGGAA
GAAATGATACTGAAACAGTCTGGGCAAACCTACTTGAACAAAATCACGGT
CACTCCACCAATGATGTCGGTGTTTTCAGAACTATCGAAACCTACAATGT
CAGAAGAGATTCGACAACAAAGATTTACTGAAATGTGCACAAAGAAACCA
GAAGAGGACACGACAGATAACAATGTCTTGAATTTGGAACCGATCATCGC
TTCAAGGCCAAGATTGGCAGAGAGCCTTTATCCAGGACATCAATCAGTAT
ATCGTACCAAGAAACATTTAGCTACAAGTTGTCCTTCAAAAGTCAAGAAA
TCACTATCTACTTCGGCTACCCCTCAAGAATATTGTGAGTGTACTGCTCG
CAAATGTGTTTGGTATTTGTTCGATCCTGATTTGGTATTACCGGAATATA
TTGTCGACTTTGAATATCTTTCAACGGTCAAATCTTGATATGCAAAGTGT
ACCTTGGAAAATCATGTGCCGTAAATAATGATAAAAGGAATCATCAACAT
GTTCGTCAGTAATTCAAGTGACGAATAATTTTCGTTTCCTCGATAAACAT
CGAATCAAAACGACAACAACTCCGCCGAACAAAAACGATGTTAAAACAAA
TAGTGATATATCGTTTCGATATGATGGATTATCTGTTTCTGATACCAAAG
GTGTCTGGAAATATCGTTGACCATTTCAAAATTATTGAAGATGGTTTCCA
TATCAATACAGCTGATCACCAGTCCACTTTGGAGTACTTGGATGTCAGTT
ACAATCAAATTACTGGTATGGAAGGATTCAAAGTAGAGTTAAATCTACAC
GGTTGTGGGTTAACTAAAGGGAAAATGTTATCTTCGCTAAGCAATATCAA
GAAGCTTGTCCTGTCCTTCAACGAACTGACCACTATGGCTGATCTCGGTG
GAAATGTTGACCTTCTTGACGGAAGAAATGATACTGAAACAGTCTGGGCA
AACCTACTTGAACAAAATCACGGTCACTCCACCAATGATGTCGGTGTTTT
CAGAACTATCGAAACCTACAATGTCAGAAGAGATTCGACAACAAAGATTT
ACTGAAATGTGCACAAAGAAACCAGAAGAGGACACGACAGATAACAATGT
CTTGAATTTGGAACCGATCATCGCTTCAAGGCCAAGATTGGCAGAGAGCC
TTTATCCAGGACATCAATCAGTATATCGTACCAAGAAACATTTAGCTACA
AGTTGTCCTTCAAAAGTCAAGAAATCACTATCTACTTCGGCTACCCCTCA
AGAATATTGTGAGTGTACTGCTCGCAAATGTGTTTGGTATTTGTTCGATC
CTGATTTGGTATTACCGGAATATATTGTCGACTTTGAATATCTTTCAACG
GTCAAATCTTGATATGCAAAGTGTACCTTGGAAAATCATGTGCCGTAAAT
AATGATAAAAGGAATCATCAACATGTTCGTCAGTAATTCAAGTGACGAAT
AATTTTCGTTTCCTCGATAAACATCGAATCAAAACGACAACAACTCCGCC
GAACAAAAACGATGTTAAAACAAATAGTGATATATCGTTTCGATATGATG
GATTATCTGTTTCTGATACCAAAGGTGTCTGGAAATATCGTTGACCATTT
CAAAATTATTGAAGATGGTTTCCATATCAATACAGCTGATCACCAGTCCA
CTTTGGAGTACTTGGATGTCAGTTACAATCAAATTACTGGTATGGAAGGA
TTCAAAGTAGAGTTAAATCTACACGGTTGTGGGTTAACTAAAGGGAAAAT
GTTATCTTCGCTAAGCAATATCAAGAAGCTTGTCCTGTCCTTCAACGAAC
TGACCACTATGGCTGATCTCGGTGGAAATGTTGACCTTCTTGACGGAAGA
AATGATACTGAAACAGTCTGGGCAAACCTACTTGAACAAAATCACGGTCA
CTCCACCAATGATGTCGGTGTTTTCAGAACTATCGAAACCTACAATGTCA
GAAGAGATTCGACAACAAAGATTTACTGAAATGTGCACAAAGAAACCAGA
AGAGGACACGACAGATAACAATGTCTTGAATTTGGAACCGATCATCGCTT
CAAGGCCAAGATTGGCAGAGAGCCTTTATCCAGGACATCAATCAGTATAT
CGTACCAAGAAACATTTAGCTACAAGTTGTCCTTCAAAAGTCAAGAAATC
ACTATCTACTTCGGCTACCCCTCAAGAATATTGTGAGTGTACTGCTCGCA
AATGTGTTTGGTATTTGTTCGATCCTGATTTGGTATTACCGGAATATATT
GTCGACTTTGAATATCTTTCAACGGTCAAATCTTGATATGCAAAGTGTAC
CTTGGAAAATCATGTGCCGTAAATAATGATAAAAGGAATCATCAACATGT
TCGTCAGTAATTCAAGTGACGAATAATTTTCGTTTCCTCGATAAACATCG
AATCAAAACGACAACAACTCCGCCGAACAAAAACGATGTTAAAACAAATA
GTGATATATCGTTTCGATATGATGGATTATCTGTTTCTGATACCAAAGGT
GTCTGGAAATATCGTTGACCATTTCAAAATTATTGAAGATGGTTTCCATA
TCAATACAGCTGATCACCAGTCCACTTTGGAGTACTTGGATGTCAGTTAC
AATCAAATTACTGGTATGGAAGGATTCAAAGTAGAGTTAAATCTACACGG
TTGTGGGTTAACTAAAGGGAAAATGTTATCTTCGCTAAGCAATATCAAGA
AGCTTGTCCTGTCCTTCAACGAACTGACCACTATGGCTGATCTCGGTGGA
AATGTTGACCTTCTTGACGGAAGAAATGATACTGAAACAGTCTGGGCAAA
CCTACTTGAACAAAATCACGGTCACTCCACCAATGATGTCGGTGTTTTCA
GAACTATCGAAACCTACAATGTCAGAAGAGATTCGACAACAAAGATTTAC
TGAAATGTGCACAAAGAAACCAGAAGAGGACACGACAGATAACAATGTCT
TGAATTTGGAACCGATCATCGCTTCAAGGCCAAGATTGGCAGAGAGCCTT
TATCCAGGACATCAATCAGTATATCGTACCAAGAAACATTTAGCTACAAG
TTGTCCTTCAAAAGTCAAGAAATCACTATCTACTTCGGCTACCCCTCAAG
AATATTGTGAGTGTACTGCTCGCAAATGTGTTTGGTATTTGTTCGATCCT
GATTTGGTATTACCGGAATATATTGTCGACTTTGAATATCTTTCAACGGT
CAAATCTTGATATGCAAAGTGTACCTTGGAAAATCATGTGCCGTAAATAA
TGATAAAAGGAATCATCAACATGTTCGTCAGTAATTCAAGTGACGAATAA
TTTTCGTTTCCTCGATAAACATCGAATCAAAACGACAACAACTCCGCCGA
ACAAAAACGATGTTAAAACAAATAGTGATATATCGTTTCGATATGATGGA
TTATCTGTTTCTGATACCAAAGGTGTCTGGAAATATCGTTGACCATTTCA
AAATTATTGAAGATGGTTTCCATATCAATACAGCTGATCACCAGTCCACT
TTGGAGTACTTGGATGTCAGTTACAATCAAATTACTGGTATGGAAGGATT
CAAAGTAGAGTTAAATCTACACGGTTGTGGGTTAACTAAAGGGAAAATGT
TATCTTCGCTAAGCAATATCAAGAAGCTTGTCCTGTCCTTCAACGAACTG
ACCACTATGGCTGATCTCGGTGGAAATGTTGACCTTCTTGACGGAAGAAA
TGATACTGAAACAGTCTGGGCAAACCTACTTGAACAAAATCACGGTCACT
CCACCAATGATGTCGGTGTTTTCAGAACTATCGAAACCTACAATGTCAGA
AGAGATTCGACAACAAAGATTTACTGAAATGTGCACAAAGAAACCAGAAG
AGGACACGACAGATAACAATGTCTTGAATTTGGAACCGATCATCGCTTCA
AGGCCAAGATTGGCAGAGAGCCTTTATCCAGGACATCAATCAGTATATCG
TACCAAGAAACATTTAGCTACAAGTTGTCCTTCAAAAGTCAAGAAATCAC
TATCTACTTCGGCTACCCCTCAAGAATATTGTGAGTGTACTGCTCGCAAA
TGTGTTTGGTATTTGTTCGATCCTGATTTGGTATTACCGGAATATATTGT
CGACTTTGAATATCTTTCAACGGTCAAATCTTGATATGCAAAGTGTACCT
TGGAAAATCATGTGCCGTAAATAATGATAAAAGGAATCATCAACATGTTC
GTCAGTAATTCAAGTGACGAATAATTTTCGTTTCCTCGATAAACATCGAA
TCAAAACGACAACAACTCCGCCGAACAAAAACGATGTTAAAACAAATAGT
GATATATCGTTTCGATATGATGGATTATCTGTTTCTGATACCAAAGGTGT
CTGGAAATATCGTTGACCATTTCAAAATTATTGAAGATGGTTTCCATATC
AATACAGCTGATCACCAGTCCACTTTGGAGTACTTGGATGTCAGTTACAA
TCAAATTACTGGTATGGAAGGATTCAAAGTAGAGTTAAATCTACACGGTT
GTGGGTTAACTAAAGGGAAAATGTTATCTTCGCTAAGCAATATCAAGAAG
CTTGTCCTGTCCTTCAACGAACTGACCACTATGGCTGATCTCGGTGGAAA
TGTTGACCTTCTTGACGGAAGAAATGATACTGAAACAGTCTGGGCAAACC
TACTTGAACAAAATCACGGTCACTCCACCAATGATGTCGGTGTTTTCAGA
ACTATCGAAACCTACAATGTCAGAAGAGATTCGACAACAAAGATTTACTG
AAATGTGCACAAAGAAACCAGAAGAGGACACGACAGATAACAATGTCTTG
AATTTGGAACCGATCATCGCTTCAAGGCCAAGATTGGCAGAGAGCCTTTA
TCCAGGACATCAATCAGTATATCGTACCAAGAAACATTTAGCTACAAGTT
GTCCTTCAAAAGTCAAGAAATCACTATCTACTTCGGCTACCCCTCAAGAA
TATTGTGAGTGTACTGCTCGCAAATGTGTTTGGTATTTGTTCGATCCTGA
TTTGGTATTACCGGAATATATTGTCGACTTTGAATATCTTTCAACGGTCA
AATCTTGATATGCAAAGTGTACCTTGGAAAATCATGTGCCGTAAATAATG
ATAAAAGGAATCATCAACATGTTCGTCAGTAATTCAAGTGACGAATAATT
TTCGTTTCCTCGATAAACATCGAATCAAAACGACAACAACTCCGCCGAAC
AAAAACGATGTTAAAACAAATAGTGATATATCGTTTCGATATGATGGATT
ATCTGTTTCTGATACCAAAGGTGTCTGGAAATATCGTTGACCATTTCAAA
ATTATTGAAGATGGTTTCCATATCAATACAGCTGATCACCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000100XLOC_000100Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000172-exon-sc0000001-1575043694:692067..692480TCONS_00000172-exon-sc0000001-1575043694:692067..692480Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1575043694:689949..690084TCONS_00000172-exon-sc0000001-1575043694:689949..690084Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1575043694:687279..687339TCONS_00000172-exon-sc0000001-1575043694:687279..687339Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1575043694:684458..684671TCONS_00000172-exon-sc0000001-1575043694:684458..684671Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1575043694:683931..684094TCONS_00000172-exon-sc0000001-1575043694:683931..684094Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1575043694:682747..682813TCONS_00000172-exon-sc0000001-1575043694:682747..682813Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1575043694:680129..680248TCONS_00000172-exon-sc0000001-1575043694:680129..680248Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1575043694:679224..679288TCONS_00000172-exon-sc0000001-1575043694:679224..679288Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1510915933:692067..692480TCONS_00000172-exon-sc0000001-1510915933:692067..692480Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1510915933:689949..690084TCONS_00000172-exon-sc0000001-1510915933:689949..690084Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1510915933:687279..687339TCONS_00000172-exon-sc0000001-1510915933:687279..687339Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1510915933:684458..684671TCONS_00000172-exon-sc0000001-1510915933:684458..684671Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1510915933:683931..684094TCONS_00000172-exon-sc0000001-1510915933:683931..684094Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1510915933:682747..682813TCONS_00000172-exon-sc0000001-1510915933:682747..682813Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1510915933:680129..680248TCONS_00000172-exon-sc0000001-1510915933:680129..680248Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1510915933:679224..679288TCONS_00000172-exon-sc0000001-1510915933:679224..679288Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1491911889:692067..692480TCONS_00000172-exon-sc0000001-1491911889:692067..692480Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1491911889:689949..690084TCONS_00000172-exon-sc0000001-1491911889:689949..690084Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1491911889:687279..687339TCONS_00000172-exon-sc0000001-1491911889:687279..687339Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1491911889:684458..684671TCONS_00000172-exon-sc0000001-1491911889:684458..684671Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1491911889:683931..684094TCONS_00000172-exon-sc0000001-1491911889:683931..684094Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1491911889:682747..682813TCONS_00000172-exon-sc0000001-1491911889:682747..682813Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1491911889:680129..680248TCONS_00000172-exon-sc0000001-1491911889:680129..680248Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1491911889:679224..679288TCONS_00000172-exon-sc0000001-1491911889:679224..679288Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000172-proteinTCONS_00000172-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:679224..692480 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.90875	7.15356	5.03247	4.13549	14.6021	10.9849	18.8197	19.6734	10.9079	12.8275	9.47835	10.0868	3.11567	3.27557	2.28216	3.15279	3.71357	4.4157	2.43616	3.30739	4.09861	3.34711	4.85321	5.03215	22.5329	21.6248	5.24376	3.11622	4.1278	3.11892
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675L_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
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BLAST of TCONS_00000172 vs. Swiss-Prot (Human)
Match: LRRC9 (Leucine-rich repeat-containing protein 9 OS=Homo sapiens GN=LRRC9 PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 2.082e-39
Identity = 101/315 (32.06%), Postives = 169/315 (53.65%), Query Frame = 1 
Query:  301 SGKRLMDYLFLI--PKVSGNIVDHFKIIEDGFHINTADHQESSTCSSVIQVTNNFRFLDKHRIKTTTTPPNKNDVKTNSDISFRYGQILICKVYLGKSCAVNNDKRLAESLYPGHQSVYRTKKHLATSCPSKVKKSLSTSATPQEYCECTARKCVWYLFDPDLVLPEYIVDFEYLSTV-TPPMMSVFSELSKPTMSEEIRQQRFTEMCTKKPEEDTTDNNVLNLEPIIASRPRLTFLTEEMILKQSGQTYLNKITELNLHGCGLTKGKMLSSLSNIKKLVLSFNELTTMADLGGNSTLEYLDVSYNQITGMEGFK 1236
            S +R+++ LF +  P+VS       +I+E GF    ++  +       I V+N+    +  RI+            +     FR+G +LI KV+LG+S   +  + +++S YP   SV+  +K+L  S               Q  C+C+ R+C W++FD DLVLPEY+V+FEY++ V  P + SVF+ +    + EE ++     + +K   +   D+ V+ +EP I +RP+L  L ++ IL  +  +  + I  LNLHG  L+K + LS L+ ++KL +SFNE T + D+     LEYLD S+N +  +EGF+
Sbjct:  464 SYRRMLECLFYVFDPEVSVKKKHLLQILEKGF--KDSETSKLPLKKEAIIVSNSLSISECPRIEFLQQKHKDEKKISLKHELFRHGILLITKVFLGQSVQAHEKESISQSNYPMVNSVFIPRKYLLNS------------VMGQRNCDCSVRQCKWFVFDHDLVLPEYVVEFEYITMVKAPSLFSVFNNV----ILEESKKNPEVSVFSK---DLKFDDEVIKMEPRIKARPKLISLDDKTILSLAKTSVYSHIVSLNLHGNSLSKLRDLSKLTGLRKLNISFNEFTCLDDVYHLYNLEYLDASHNHVITLEGFR 757
The following BLAST results are available for this feature:
BLAST of TCONS_00000172 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LRRC92.082e-3932.06Leucine-rich repeat-containing protein 9 OS=Homo s... [more]
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