XLOC_000745 (gene) - C. hemisphaerica

Overview
NameXLOC_000745
Unique NameXLOC_000745
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000010:1144631..1148270+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000745 ID=XLOC_000745|Name=XLOC_000745|organism=Clytia hemisphaerica|type=gene|length=3640bp|location=Sequence derived from alignment at sc0000010:1144631..1148270+ (Clytia hemisphaerica)
AAATTATTGACGACTAATCGTTCACAAAAGGACTTTTTCATTCGAGaata
agtttaatattttcaaaaagttataatcATCATGAAAATATGTCGTTTTG
AGAGAGAAGATGAATGTTGAACGTTAAAGAGCATCAGCTAAACTGACCAC
AATTGAAGTTGGAaaaaatactgcaggaaaaacTCTTCTTGAAATAACAA
TGAATAGAAttcttttcttcttgttttttNCACTGACCACGACTTAAACA
AGCTCGAGAATGGAGTAtaacaaaatttatttcatcCTTTTGGTGGTTTC
AGCTACTATAAAAGGTTTGTGAATACTTTCAAACGCAGTAGTTACGTTTT
GAATAGGATAAGAAATTAGATTTGTTTATCCTCTAGGGAAAACGTTTTTA
TCCCGGAGGGGGAGGGCGAGATgatgggtatgtccgagccaaagttaCTG
GTGATGGAGTTTTGGACCCTTACAGCGACTCAATTTGCtctttaatggtt
tttgtacccctttttgagcgtgtgaaaaagggacccttatggctcatATT
TgaggatttgaaatttttttatatttagtaTTATGGTTAATTCTGTATTC
ATGAAATATAGCCTCACCATTTCGGTTCCTATAGGTATCTTAACATTGTG
TAAAAATTGGTTCAGTGGACTAAGAGAGCTCTTATAATTTCATATGTCAG
CATAGTCTAGTCTTTTCAAAAAGAGCTGAAAATACAGTGCTTTTAGCGAC
CAAAGtggtgaaaattaaaatttttcccctatcggcgcaaaccatggttg
cgcctccttaatCTCTGATAACACTTTAAATGCAACTCAAATTACTATTA
CGATATCGAGATATTGTATATgcaaagaaaaacttcaattttaaaattca
atatGATTCAGGCAGAATCATTCCGAAAAAGAGCCATGCTTGAAGGAAAT
CAGTGgtccaaaatcaattttctcctgtcggcgcaaaccatggttgcgcc
tccttcgTCACTAAATTATTTTCCCCTGCACGTTTGAAATCAAGCTACTT
GTTGCCTTTTATATAATAATGTAGTCCTCCCCACATGAGTGCACAACATT
TTGATATTGAGGCTTATAGGATCACTCACAATATAGAAAGTTACTGTAGT
TAAACCCGATTTCTATATGTGACAAGTCACCATTCAAGTATAAGTAAGTA
TAACCCTCACCTTAATCAATCAATTAGAGtgtagggaaaaaattttagca
aggggggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNCTGACCACTCCCTGAGATCCTAAGAACTGGCTCTCTTATA
AAAGTGAATTCctcttttttttcaacatttgaagtttttcgaatttttta
tttcGGGATGAAAATTTTCTAGCAGGCTTCAAACTATACACATCTACATT
TTAGATTCTCTATTAATCAAATGTTATGACTGTTCTGGAACTCACGCGTA
TTGTAACAACACAAGAAAAACAAAGACTTGTGATGGACCACAGTATTCCT
GTCTCCTACGATCTGGAAGCACCAAGATTCGAGTTTTAAAGAACGGTGCT
TtagattttgaagtttttagcACTGTAACAAAAACTTGTGCCGTGGAGAG
CAGTTCATATTGTGTGACTCAAAAAGAAATCGACCCTAAAATGCTGACCT
GTAAGGTATTGCAACAGCTAATTTAGACTCGCAGCCAAGCTGCTCACGTC
ATTGTGAATTAACACCCCTGTGTTACAGACCACTTTAAACTTTGAGCGAT
CAAAATTTGTCCCTAGTAGGAAAAATATCCTataatttcagcaaaaaatt
gaccttgccccattcgaaattcaatgtaaaaaaattgcacttcaaaacca
tcccaactggatttttttgattgcttggaacgatagaatttctatcccca
ttgggctTTCGATAGAAATATTTATTTCCGTTTCCGCTGTGTAAGAAGAA
TTTCATCGAGCCTGTGAGACAGGAGGTGTAAATTAACTTACGCCTTAAAA
TCTGAGACTGCTCAAATATCATCACGCCTCGTTGACAAAGGGGGTGttag
atttttcattttcactcaTTACATCATGCATAGCCCTATCGATAATGGCC
CGTACTAATAGTTGTTGACCCTATGCTGCATCATACATATTGTATGATGG
CACTGATTTCAAAAGCGTGAACCGAAAGAGTATCGATGTCAGGGTTTCTT
TTTACACTTATGTTATAGGCTGTGTGGTGTTACGAAGATGGATGTAATTT
CAACATGAAACAAGCTAACAGAGCTGGCCAAACGAGTCAAGCAAATGAAA
TTGACCCATATGGGTGGTATAAGACCTGGACTTCTTCAGCGACAAATGCA
ACTGGCTTAAAACTTGATTTAACATTTTATCTGTGTTTGATTTCTGGgtt
attgatttttcttgagtGAAATGAAAACGACATGGATATCCCAGCCAAAA
TTTCGAGTCTAGATACCAGACGACGAATGATCATTTTGGAGCATCTTGTC
AAAGTTGGTTCCAAAAAAATTGGCAGTCTGCACATTTTGATACATTTCTG
CTTGAagggaaaaaaatataaagtaatacctcgttggaaagatattctta
ACCGGACTATTTTAAGtcttcaaaatcttttaaaaatttagaaaatggaa
atgaaaaatgaagatgaaaaaattaaagattttttctactggCACAAGAA
TTTTTCCGAAACttgaactttttcattttcgaaattttgaaagccttaaa
accaTCCACTTACGAATATCTTatcaacgaggtattacttgtAGTTATAT
CTTTTCTCCTTCTGCAGAAATGTATCAAAATGTGTAGACTGcaaattttt
ttggaacagacttaaaacagaagcagccaccgacctaaaatttgcaaata
tctgctctgatttgccagctggaaaaatttccccgaaattaagaacagtt
cctcgttttccaggggagaaatttttacttcagaacagttatatttttcc
agctaggaggtaagAAAACTTTCGGAACaggtacgaaattaccaggcgat
tgattttacgcgagttaactattcttatctaccagggctgacgaaatctt
ataagaacagatcgctaaattccagctcgacattgaaggacttttaagaa
cagaaaattaatttccagctaacagtttaaCTTTAAGTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001407TCONS_00001407Clytia hemisphaericatranscript
TCONS_00001408TCONS_00001408Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001407-proteinTCONS_00001407-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:1144631..1148270 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.68	0.7	0.74	0.71	1.61	1.42	1.71	1.89	2.12	1.91	1.71	2.08	1.18	0.49	0.4	0.3	1.29	1.85	1.32	1.44	2.77	2.57	1.66	1.71	1.57	2.37	0.76	0.61	0.57	0.43