XLOC_029427 (gene) - C. hemisphaerica

Overview
NameXLOC_029427
Unique NameXLOC_029427
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_105:747787..754878-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029427 ID=XLOC_029427|Name=XLOC_029427|organism=Clytia hemisphaerica|type=gene|length=7092bp|location=Sequence derived from alignment at scaffold_105:747787..754878- (Clytia hemisphaerica)
CCAAGGGAAACCCATGAAAGGAAGAAACAAACAACAAGCAGCAGATACTT CACAAGGAACGCATGAAGTCCGGGAAATTATGACTACCTTAGTCGGCCCT AAGTGACTAAACTTTGGCTTGGTGACTAAAATTAGGGCCGACTAATANAT TGTTAAATACAATTTCTCGTTGGTTGGAATAAAAATGTCCTGGGCAGAAA ATTTTCGAAAAGGAGGCTAACACAACTTTCCAAATATTTTTTCAAAAAAT CAATAAGCGGGGGGGGGAGTTGGAATAAGAATGTCCTGATGGAAATTTTT TGAAAAATTAATTAGCGCCCCCCGGCTATTAGGTACCCGAGAGTAAAGAC ATAATCAGTACAAAAGAATTTCATCACATCACGCTAATTATGCAGATTTT TTTAATCAAAAACAAAAGAAATCCATTAACCAAAACAAACTCCCTTAAGG GTAAAGGACCTGACATGTGACGAGCCGTATTCTCATTGTTTTTCGAGAAG CTGTTTTTCCATCTCTAAATTATTCTATGATATTGCAGGGACCAGAATTA CCTTGGGTTGGAGTCTTGAAGACTTGAGCTTTTCGAAATAAAATCGAAAT TTAAACGTACATTTAGATCAATAATCTAGAGTCGAATCGCCCATATATGA ATTAAAGCCACCTATTTCCAAAAAAAAGTTGCGCGGCCCATATACCAGAT TTAAAGGTAGTTATTATCGCGACAGACATTAGAGAATAAGTTATTTCATT GTTCGTTTTAGAATTCCCTTTTTATCATACGCACAGAAAAATATTATTCT TATTGAGGACCTCCTTAAGATTGACCTTTCCAAATTGTCTTTTTTACGTT TTTAGTGTCAGATTTCTAGCGAAACGCTCAGATTTCGGTTAAAGCTAAAC AAAAAACTGTCAGTTTTCCCTAATACTGTTTTCTGATTGGCTATGTAATC TCATGACGTCACTCTGAACCAATCAAAATGTTTGTATAAGGACATCAAAT AGAGAGCTCTTTACCCCTAAAATCTCCGTATAAATGAGGAAGAAAATCAG AGAGACTAAAAAGGAGAAGTTCAAAATTTAACGAATAAAGCAAAAAGTCG ATCGATTCTAAAATGGAGAAGTTGACATGGTTTTTAGTCGTTGGATTTGG ATGTCTTTCAGTGTTGAATTTTGTACAGTATCAAGAGATCAATTCTCGTT TTGTGGAATTACAACAAAATTCTCAAGGTAAATTTGCCTTTTTGAAACTT TTTTCTTTATTCATAAGATCATTGCAACTAAAGTCTATCTCAAAATGATT TGCAGCTGAGAAAAAAATGGCTGTAACTTTTGTCTCAGCCATTTTTGTCT CAGCTGCAAATTATTTTGAGACAGACTTTAGACCAAAATTGCTGTCGAAT ATGTGCAAGCGAGGGTTTATTAGACATCCTGTATAAAACAGGGTGATGCA GAAATGTCTAGTCTGGATCACAGACCTCTACAAAACAAACAGCAGTATAG GAGCACGGATCCGTTTCAAAAAGCTTCAGTTATAAGTGAGCATTTTTGTA CGGCAGGTGAGAAAACCAGGACTCGGAGGGATGTTGCAAACGATGAAAAT GAGGATTNTTCGAAAAATACATTTTCAGGTGAGAAAACCAGGACTCGGAG GGATGTTGCAAACGATGAAAAGGAGGAGTGGTCTTCGTTCTTTGATCAAC AAAAACTCATCAATTTCATACAGAAGCAATCCAATCAAACAATTTACAAA GAAGTCAACCAAATCTTGAAACATTTCACATCGAACTTTCCTGCAGAAAA GTTATGTAAAGATTTATTCAAATGTGAGAAAGGTAAAATGTTTTATCGAT CTAAACTTATTGAATATCGATCTCTTCCCAATATATGTAAGTTCTCTATA GACAATTTCTCGTAGACCCGGTAAGACCCCATCTCACTGACAAAATTGGC AAAAGTACGGGCCCCAGAGGAAAATATTTGTCCTCACTGAAAATAATCAA ATAAATAAACCCTCTCTGCAAAGTATTGTGCTTTTTTTCCATTCCAGTCA GTTTTCTGACTTGAAAACAATGGAATTCAAATCCCCAGCAATGAATAAAA CATGGCATATCAATAAACTCAATCGAGTTATTTTTACCCCCATTGGCTGA AAAAATCCTACCAGGTCTATGATAAGGAACTGTCTATAATATTTAAATTC TGAAGATGTTAGTTAATTTCTCTAGAAAAGTGTGAAGATGAAAGGAGAAC AGTGGTTACTGAAGACAAAACTGGCAATGGAAAATCAAGGTGTCTTCAAG GACCACCAGGGCCTCCGGTAAGATATCTCTACAAGAGAGAAGGGGCGAAA ATAAAAAAGATTTTTCTTTGATGAATAATTTTAAAGTTGAATTATTAAAG TGGGAGAGTGGAGCTTCTACAAAAGAGCTTCTGGGTAGAGATTAAAGGTT GATTCCTGTGCAGATTTAGAAAGGTATTAGGGTAAATTCAAATTGCATTA TAATGTTGACTTTTTAAGTAAGTTTGAATAAGTTTTGACACTCATTCACA CACCTCGTACAGTGCTAACCAAATTATAACCAAATTACAATCAAAGAAAA ATCACTAAAACTATCATATTCAAATTTATTTATGCGAAAAAATTTTTATC GAATATAAATCGAATCATTTACATATTTAAAACTAAACCCTTTTTCTAAA CNGAATATAAATCGAATCATTTACATATTTACATATTTAAAACTAAACCC CTTTAAAAATCGCTCGTAGAATCTAGACGAACAGGATATTGGATTTAGAC CTGTAACATTCTTGATACCTTTATTTATATTCATTGACCAAATATTTCAT AAATCTCAAAACCATTCCTCATTTATTTAATGTTTTTGTTGTTCTGCTCT GAAGGGTCCACCAGGCCCAGCAGGACCAGGCCTCGAAGAGCCGAAGCTTG TATCAAGCACATTGAGCCATGGTCAAGTTAACATCACAAAAACTAAAGTG TTCGAGTGCAAATTTTATGGTAATCCAATTCCAGACATTGAATGGAAAGT TCCAGCAAAGAGCTTCGAGGTAGATTCCACAGTTGACAAAAAAAGATTCG AGATCACGAGTCATTTGACGATACATAACGTGACTTGGGGTGAACAAGGA CGTGTTGAATGCAGTGCTAAAAGTTTGCTTGGTGAAGCTTATGAATCTGG CAATTTAACTGTTTTAAGTAAAAAACTATAGAGAAATGTCAAGGGATTTT TAGGGAGTATATGTTGAAAATTTCCANGTTATAGGGATATTATAGAGAAA TTTCAAGGGATTTTTAGGGAGTATATGTTGAAAATTTCATATGAAAATAA GTTCATGTCCAAGTGCAAGCAAAAATAAGCACCTCTGAGTTTAAATCTCT ATATAATTATCGGTGGAATCAATTTTTATGATCATGTCAAATGATCTAAA AAACTTTATTTGACTAGAATTGGTCCCTGGCAAGATTAGGATTTACATTG TATTATATTGGGACGAGATGGAGTTTTTACAAGCTCTTATTTGATTTGGT TGGTTATTAACCAGTAATAAAACAATCTAACAAATCTAATCAACAAACTA ACACGTCATTTTTATTACTTCAAATGACCAATTATTAAAGTATCTTATAA AAACTCCATCTCATCTGATCATATTTTTCTGTATACTTTTTTAGCAAAGC CACAAATTCTCAGTAGAGAGACTTTAGTGTTTGCACCTGAAGGAATCACT TTCGATTTCCCAAAATGTGACGTTCAAGCAAATCCACCAGCAAAAATCAC ATGGAAAAGAATCTTTTGGCCATTACCAGCCGGTCGTTTCACAGTTCAAG GTGACAATCTGAAGATCTCGAATATCCAGTTCAAAGATGAGGGATTTTAT GTTTGTGAAGCTGAAAACTTCCTTGGTAAGATACAACGGTGAAATTCTCG TCATCTTAAATTAGATGAACAAACATTTTTCGTTTTGCTCACTTTTTACA CCCTTAGAGTGCACTTTCACTCATCTTCACTCATCTTCATTTCGTTCCTT GTAGTCTATTTTTTCTGATTGTGAAAAACATACCCTTAAGGGCCGCACGT ACGGTAGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCCTCCTTCTGGAGAAATA AAGGACATAAAATGCTGAAATTTGAGTGAGTCCGTGTGGGGATACCTAAT CTTGATAATACATAACATTGGATATTCTTATACAATTCATTATTGATTAA ATTTCAGGGAAAACAAAAGCGAATATCCAACTCAAAGTTAAGGCGATGGA AATCGAAAAATCGTCACCAGCCTTTCTTAAACAAGAAGGAGGTCAAGTTG CAGAGATCCACTGTTCAGCATACGGAAATAGCCAACGTATGTCTGGTAAA ATTACCCGAGTAGGATCCAGTGAACTTATTCAAGAAGAGACAACTAGAAC ACCGAACTTGATTTCGGTCAAAGCTTCTGTTCGAGGAGAGGGAACTTATC GCTGCACGATTAGAAACAACAAGAGCGGAAAACAGGTTGAAGCTGTTACT CGAGTTGAGAGTGAGTAGAAAACTTTTTAGGTGATTTTACTTAGAAAATG GACCTGTTCAGATCCATTTGTCATGTAAATAGTATAAAATGTCAAAGCTT TGAAATATTCAATTAAATTGATATGATTTCACACACATAGATATAGTCAT AAAGTATAAACTAGGTCAAATATGCATCAAAATACTTTTGATTTCTACTT TTTTTAAAACAGAGGAATGTGGTAGTGGCTGGACCGAGTATTCAGGGGAT TGCTATGCGTACATAAATCAAAAGAAGACATGGTATAATGCAGAGTTATA TTGCATTTCAAAAGGAGGTCACTTGGCAAGTATTAAGAGCAAGCAGGAGA ATGATTTTGTGTATGGATTGACACCTGGCGGACGCAATAATTACTGGATA GGTAAGTTTAACTAACAAGAGATGATAGGTTGAAAGTTTATTCAGAATTC AACGAGTATNGGATAGGTAAGTTTAGCTAACAAGAGATGATAGGTTGAAA GTTTATTCAGAATTCAACGAGTATAAAATAGAAAGTTTTCAGAGTGGCAT CACCTTCCCGCAGCAGACCCAATGGATAAAATAGCCANGAAATAGAAAGC TTTCAGAGTGACATCACCTTCCCGCAGCAGACCCAATGGATAAAATAGCC AAAATATCGTCCCCCAGCCGAAAATCATCCTCACTGCAAAATAATGCGTG CCATTTTTTCCATCCCCACAAATTATGTTTAAAAATGGAAATTCAAACCC CCCCTTCGAGTTTCAGTTAGTTATTATCCTTGCTGGTTGAAAAAATCCTA CCGGGTCTGTAAAAAGGGGTTGTATAGTGTAAAATTTCAATGCTGGACCT GGAGCCGGGACCTGGAAGCATTCTTATTCTACATATCTTTTAAGGCTTAT TATAGGAGATGCAGCAAGGAGCAAAGTCGGTGTTCGGTTAACTTTTGTGA ACGAATCTTTGATATTCTTTTTAAATAATAACCCTTCAAGCAGAGAATCT ACAGCAACTTTTATGTTCTTTTAGGTTTGTCTGATAAACAGGTAGAAGGC TCATTCACTCGGTGGAGTGACGGAAAAACTGCAACATACACGAATTTTGA AAACGGACAGCCAAACAATTCTGGAAATCAAGACTGTGTATCATTTTTCG AGGACGCTGCTGAAAAATGGAATGATTGGGGGTGCAGTAAATCCTTTACT TTCGTATGCAAAATTTCACAATAAAAATTCTCTGAAGAAACTAAATTGTA CATCAGTTAAAATCTCGCTCCTATTTTACTTAAAGACCAGTTAGATTATT ATCAGTATTTTTGGATTTTTTCAATTTATAATTTTACATTTCTTGTTGAA GATAAACAAACTCGAACGCAGCTTCTTTACTCCCTTTTTTATGATTCAGA GAGCACTCACGAAAAAAGAAGGAGATTTTACCACGTCCATCAGTAAAATC AAATAGTGGTGCAGATGCTCTGGGTACGAGATTAGAGCAGGGCCCACGCC ACGTGGGGGGGTGTCATTTGGCAGGGGGCCATGACCCCCCAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046080TCONS_00046080Clytia hemisphaericatranscript
TCONS_00046079TCONS_00046079Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046080-proteinTCONS_00046080-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_105supercontigscaffold_105:747787..754878 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.73 1.76 1.33 0.93 0.56 0.8 1.8 2.43 5.84 5.13 6.46 5.66 42.94 40.08 61.86 71.39 17.93 18.75 20.72 29.3 10.36 10.49 19.68 20.95 13.99 9.35 7.29 11.46 92.82 93.06