XLOC_029698 (gene) - C. hemisphaerica

Overview
NameXLOC_029698
Unique NameXLOC_029698
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_113:187084..191714-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029698 ID=XLOC_029698|Name=XLOC_029698|organism=Clytia hemisphaerica|type=gene|length=4631bp|location=Sequence derived from alignment at scaffold_113:187084..191714- (Clytia hemisphaerica)
GNCACAACAGAAATGACATTCTTTTCTCATCAACAAGGTACTTTTATTCA GGCCGTATTTTACTGGTTTTTACCTTTACTGTATATGTTTTGCGGTTCAA ACGATTTTTCATATGATGGATAAATTCTCAATTATGTATTGTTCTATGTC AGGTATCCAATCTATTCCACAATTTGTTTCGCCGAAATCACAAAGATCAA CTGGCTCCTTACAGTACGACAAGTAAGCAGATTTTTTTAATTTCAATTTT TTTCATTTTTTGTATTAAAATGTCTCTATATATTTTGTTCAAAAAATTAG ANAATTTTTTTCATTTTTTGTATTAAAATGTCTCTTTATATTTTGTTCAA AAAATTAGGTTAAAAAGTAGAACTCTAAAAAGTACAACACTCGCGAATCT CGAAAAGGATAATTCCAGATTTCAGTATTTTGATATTTTGAAAGTCTATA ATTTCCCAAAGGATGGCTCTTCGGTTTTCCCCTTTGATGGTTAAATGGAA ATTTTGCCGAGGCGCCATCTTATGATGACGTATCCGATAGCCAATCAAAT GAGCGAGAGAATAAAGGGAAACTCCAAAGTTTTGTTTTGAAAATCAAACC GAAAGTTCTTTTTTTTTGACGTTTTGCACTTGGGTTTTTTCAAATGAACT TTGCTGGATGATGGTTTTTATTTTTTTTGGAGTTCTTCCAGGAATTGTTT AAATTCTAAAAATAGGATCTTCTTTTTTAGAATAATACAAGATATGGAAA AAATTCTTCTTGGGGATAGAGAAATCACTCCTGTTACACCCGTTGATAAA CGCTTTGCTTGTCCACTATGTGGAAAACTTATGCAAAATCCACTGCAGAC TGACAGAGGTACAATACACCTTTCCCGTAATTCAAATTTCTCAGAAATGG CCCGGGAAAATGTGCGCTCCACCGTTGTGTATAAAATTGTTTAGGAGGTA AAAAACGCGTTTTTGCCTGCGAGGGGTTAGGGAAAGTGGGATTTTAGCCT CTAACTTTTGACAGCGACCTTCTTTTGGCAAAATATTTTCAGGGTGGTAT AATATCATGAATAGATTGAACATACTAAAATTTGAGGGGATTTTGTTCGA CAGAACTTATGAAAAGCTCAAAAAACCAACTTTCCCTAAGGGAACGCAGG CAAAAACGGGTTTGTTTACCTCCAGAGACCAAACGGTGGAGAGCATCAAA ATAATGCGCGCGCATTAGTTTTACGAATTACGGGAAAGGTGTATTCCTTT ATAAATTACCAGGTTGCATGTTACTTCAAGTTCTGTAGCATTACTTTATA AGCGGCCTAGTCAATTCCATTTTTAATCATACCAACCATGTCAAAGTCAA AGATATGATAATTATATCTGGATAGCTTCAACTCTTGGGCCTTGTCGTTC AGAGTCTTGTTTGACAGATATCCTTGCCTTGTTTTGAAGTAGATATTAGC TATTGTATTGTTTGTAATTTATATTTTTTAGACCTTTATATTAATCAAGA TGTCCTGAAAACCTTCAATTACCCCCTTGAAAAATCTAAGATTTGACCCC CAACTCGGGAAAAGTTTGTTGACAGTAATACACCCCTGTATGGTTTTTAA AATGAAATACGCGTTGTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNAACTTGTTTTCTTATTCTCAGCCTGAG CAGTTCCTTAACAATTCCTTATTTTTTGGACCATTTTCAGCCTCGAGTTC CTTATAAACGTGTTTCTTATAAAAAAAAAACGTGTAGCCTAATGCATAAT TATAATAGTGCACAAATTTTCCTCTCATCATTGTTTTGGTGTTTGAATTT TTAATTATTCAGTATAACATTGTGGTAAACAAAAGGTCTACTGATTTTTT TAAAGGAATGGTGGCCTGTACCTCATGCTATGAAGATAGACGCAGAGAAA TAGGCTCTGAAATATGTCCACTTGATGGGGAAAAAATTGAACATGACAGT TTTACAAGACTAGATAAATTCATGGTCAGAGAAATATCCAAAATCCAAGT CCAGTGTTTTTATGAAGAATGTAAATGGAAAGGAGCACTCAATGATATAA ATGTAAATATGCTCATTTCAGTTAAACGTCTTTACAATGTTTTGAATACT ACACTTAACATAAGTTTGTCTAATTTCGTCATATCTCATCTAATTCTGAC TACCCTTTTTTAGAGTTGAGAACAAAAGAAAGGTCAAAATTGCTGATTGA CTTGCTTAGCAGTAAAGGGGAAGAAATCTATTTTAATCGGTGATTCTGAC CTTCCTATTATTCCCATCTCTAAAGAAGGGTGTCGAAATTAGATGCGGCA TGTCGGTCGGGTGTAATTTCTATTTCTATCCATTTATTTTCATAAGCCTA AAAAAGCTAACATCGCAAATAGAGACCAACTTAAGGTAGTAACATTGAAA ATTTAGTAACATCATATTTTTTGAAAGATTTTGTCACTATTGTCAATTCT CAGATTTTAAATATTTGCTATTAATACCTTTTATTTCCAGAGACATGAAG AAACAGACTGTCAATATGCAAGAACTGAATGCGATATTTGTAGGCAGAAA GTTCTCAAGAAACAATTTGCAGAACATAGAGCAAAAGATTGCACTGGAAA TTACGATGTTGAAATGGAGGTAAGTAATTAAGGACATTTCATTTAAAGTT GTTTGCTGGTGGACCTGTTGATGCTTTTGAAAGAAGGTTTTGGCTCTTTT GAAATTTGATTATATACTTTAAAAGCTCTACTTTGATTCTTTGAAACTCA AGTTCTCTTCTTTGTTGATTGCATGTTATTGATTTTGTTATGTTCCATTT TCAGGAAACTTATGATACTGAGGAAACCAAAATGAAATCAAAATTTAAAT GTCCAAGTTGTGGAAAAGAAGTTGAATCATCGAACTCTCATAACCATTGG AAAGATTGCCAAGGTACAAAATGTCCTTATGAACAATTTGGGTGCAAAAA TACCTATGGCAGAAGTGCTAAGGAACATGAAGAACATATTTCAAATTACC ATAGCTATGATCATTGTGTATTAGAATTTGTTCAAGGTGTATTGGAAGAA AATAAAAACCTTGATAGCAGGATAATGCAAATGACAAGAGATAAACAAAC AATGGATAGGAAATTCTCATCTTTACACAATGATTATCAAATCCTACAAA ACAAATGCAAGGAACTTTTAGAGAAGTCTCAAAAGAAAGATAGGGATATT AATCTTCTTGAATCTAAATTTCAAAAACTTTATAATGTTGTTAGTGATCT GGAACAAAATCAATATGAGAAAAAAGAAAGTGAACTCAAGAATATTGTAG GGAACTTATCAACAAAAGGAAATGCACTTTTTGACATTACTAAATTGAGC GAAAGTGAAGAATTAATAAGAAAAGTTGAAAGCGACCAAGCTATGTTAAG TGCAAATTTAGCAGATACAAACCTCAAAGTGAAACTTTTAGAGCATCGCT CCACAAATGGTACATTGATATATAGGCTGGAAAACTTTACCCACAGACTT GAACAAGCACGCCAAGGAAAAATTTTTGCATTGCATTCACCACCATGCTT TACTTCCCCAAACGGTTATAAATTTTGTTTACGAGTTTACCTTAATGGTG ATGGCATGGGCCAAGGAACACATATCTCAATATACTTTGTTTTAATGAGA AATCACTACGATAACCTCCTTGAATGGCCGTTCCAAAAGAAAATTTCAAT CAGAATGATTAATCATAAAAGCCGACAAAATGATAAGAGAGAAACTTTTA ATACCGATAAAACTTCCACATCCTTCCGTAAACCTGATAAAGAAATGAAC ATGGCGGCAGGATGCCCCAAATTCCTTGATTTGAGTAGTTTATTAAATGG GGGTTACTTGGCGGATGACTCCATTTTCATTGAAGTAAAAGTTGAAGATC CTGTCAAAAGATGATTATGGGTGATAAATAATACTCAAAAATAATGATAA TAATTATCACCTTTATGACAATGTTGATTTGAAATTTCCATTGATTTGAA AATAAGCAATATCCTCAAGGCAAGACTGTTTCATGATCACAGAATTATGA TTTGGCAATTCAAATATTGTAAGTATTATCTAAAAAGTTTTTAAACATCT TGTCTGTTGATTCTAGTTTTAACAAGATGGATATTTTTTCAGTTAGTGAG CGTTTTCTCATTTCTTTATCAAACGTTACTGTTCCGAATCCTAAATATAT CACTTACTCCTATAGATAAAACTGTGTTTCTTTTTTTCAGCGTTTGCAAT TCGTATTGCATCTCAACTTTTGAGAAGAGACCGGTATTTAAAAGCGATCT TAAATGAGACCTGAAGAGACCGTGTAAATATACTAGCACTGAATGCGATA TTGGCAAGCAGAAAGCTCTCAAGAAAAGCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046530TCONS_00046530Clytia hemisphaericatranscript
TCONS_00046529TCONS_00046529Clytia hemisphaericatranscript
TCONS_00046528TCONS_00046528Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046528-proteinTCONS_00046528-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_113supercontigscaffold_113:187084..191714 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.33 21.6 10.67 7.2 30.65 26.25 53.29 60.73 19.87 60.48 38.32 21.26 53.02 44.86 57.89 93.07 54.47 42.09 72.66 95.42 32.05 37.17 52.99 55.1 61.99 69.6 112.76 110.35 114.06 71.96