XLOC_030073 (gene) - C. hemisphaerica

Overview
NameXLOC_030073
Unique NameXLOC_030073
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_123:305747..310246+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030073 ID=XLOC_030073|Name=XLOC_030073|organism=Clytia hemisphaerica|type=gene|length=4500bp|location=Sequence derived from alignment at scaffold_123:305747..310246+ (Clytia hemisphaerica)
tgaaaatgttttgagaaaataaaaacataaaaataaattattttttttat atcatGTCTTTGCGAGTGGAAAGTTATTGTGCGAAACAAGAGGAGCGAGA ATGAGAGAGAATAAAAAATGGCCAACATCACACCTTTGCATTGTGTTGAA TCTTGTAAGGTGTCAAAGCATAACATGTTTTCATTCTAAATactcaaata tttcttttctagCAAGATAATTATTCAACAACCTAAGTCAACTGAAAGAG AAAGTcgttaaaaaaaagattttctttatatattatgttattattatttt tccaacTGTCTTGAGTGTTGTGGAGTTTTCTCAAATGAATTCTCTGGATC TTGATGttcgaaaaaaatgaaataaaaagattgaTGTGGCTTCCACAAGA CAGTTAAACAAGAAAATCAAAGTCTTCTACAAGGAGTGCATAACACGGAA AATAAATCTTCACACATATATTACATAACAACTTCGAAACCTTTTTTGCA CACACAGCACAGAAATGGTANCAAGAGAATCAGAGTCTTCTACAAGGAGT GCATAACACGGAAAATAAATCTTCACACATATATTACATAACAACTTCTA AACCTTTTTTTGCACACACAGCACAGAAATGGTAAGTTTTTCTGcatctt tttgtcatttttttgtgagaaataaaaatattgcaggAAATTGAATTCAC ATTGCTATCATTTCCTGATTTCAATCCGGATTTTAAGCAACGAAGTTCAA TTTTCTGCAGTGTTTTTTTGTGCACTAAACTGATCTCCAATTTTATAATC TATTTATTAGTTACATATTGACTTActgtttatagaacaatttaATAGGA GTATTGAGGCTCGCAATGCCAaaagtagcctggatatccaagctcaaaat ttaagaaaaaacaaaatttacctcaacatacaaagttcttaaattataga gcttggtctccctagagaatgaaagNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctagagaatgaaagtgaaaa cccatgtttcctagccaacccagggcagcaaaacagaaattaataaaaag cagtcttacaagatctaaaactattaaaaagatccaaagattacaccaaa gtccataaaaaagtttgcatgcattatcattaccaaccatgttttcttgg aaaatgaacttgcctctgttttcttctttttgatgttttcatgtaacaga aaactccatcttcactagcaagtggaggactatcctatttttgctttaga attgctcaacaccgtgtagattggcccttacggttttagcgaagtgagcg caagcaagcggacNATGGTAAGTTTTTCTGCATCTTTTTGTCAGATTTTT gtgagaaataaaaatattgcaggAAATTGAATTCACATTGCTATCATTTC CTGATTTCAATCCGGATTTTAAGCAACGAAGTTCAATTTTCTGCAGTGTT TTTTTGTGCACTAAACTGATCTCCAATTTTATAATCTATTTATTAGTTAC ATTGACTTActgtttatagaacaatttaATAGGAGTATTGAGGCTCACGA TGCCAAAAGTTTTGAGCCATATCTGCAAACTGCAGCTAAACAAATTTAAT ATGCAGATGGAGTTGGGTGAAAATTTTACTgtagaaaacaacaaaaactc tTGTTTCTTTAGTATGTAGAACTGGTAGAACTATGgacttcttaaaaaaa ctctgcGGGCATCATTATAAAACTAGATTCCTCtacaaaatctaaatttt gtttACCCGTACTGGCGTAGTAAACAGTTGCATGCTTGCAAACACATTTT ATAATACAtccaagatttttgaagcctttgggtcGGGCTTTGGATGTTCT CAAATCTATAAATGTTCtcaatttcaccattttttttttggtgttttgtc cattttccttagaaatcgcgcgtttttgagtccataaatctttaaaatat tctcaactattttggctatcgaagccttgtgttcttatatagtttgttct tatagaaagatAAACGTGTACTCGTATTATCACGCAAGAAAGAAGCCCCG ATCACCTCATTACGCAAATTGCTTGGGAGGGTATTAATGATCTGTTTCTA CATTATAAACATCAATAAATGATCATGAATCGGGTGAATGCAAAACgaca acaaaaaagaacaaatcaaaAACTTCTAAAATGCATAAAATTTAACAGTT TCATATTCAACTCTTTTCTtaagtaaaaatttttcttatttttggtgctt tttaaaacttgttcttataaaaaattataggTAATCGGCCTTTGTGCGAA GGATTGTATATGCAGAAAATCTTTCATTATAGACTGGTGAACACACTTCA GTAATCTACGGAACTCCATATCCTTACCGTCTGTTTGTGGGATGTTTACC ACTGGAGGCTACAGCTGAAGAACTTGGTACATTCTTCTCGCAGTACGGAA ACGTCGTTGAAGCCAAGGTTGTCCTCAATGAGAATGGTGTTTCCAAACGG TTTGGGTTTGTCACTTTCACAAATAAAGATGACGTGACGGATTTGATTAA AAACCGcactgttgaatttcaaaagaaatggaTCAACGTTGGACCGGCTG TTAAGAAAAATGTAAGAAGTTACTTTAACAGTACTCACAGTTTGTGCTTT TAGCACAATTTTCCACGATTTTTGAATAATTCTAGAAGATGTATTCATTC TCGCATAGAATCTTTCTGTTTGAAAGCATTACGGCCGAAAATAAGTTAcc ttaaaatattaagaactagCGACGGCAACATTGAACTGTTTTTTATCGCG GTTGCCATATTTTGATTTCGTCACTTCTCATTTTCAAGTCTCTTTTTTCT TCATACGAAGTGCTGCGAGCctaaaaaagagatttttgcGACTATATTTT TTCCATCCAGCTTGAAAATCAGACCAGCGTTGGTGTTGGTGGTGGTGATA ATCCATCGAAGCCTCGTTCCGCGACCTCAGTAACCGTCGTCACAAAGAAA TCACCACCTACTACAACAATGGCACAACAACAGCAACACGGAAACACAAA ACAATCGTTCTATCGTGGTCCACAACATATTCCAAAAACTGTCATTCGAA AATCGCCCACTGAACAACATTTTGAACCAGATTTTATGCGTGCTCTCACC AACGCTAACGCATACCAACAACACAACCAACATTCAGAATTTTGTCCGCG ATATCATCAAAAGATTGATGACTCATTCAGCTCAACATGGGGAATCTCCA ACAAGAAGACTTCCTATTGGTCTCAACCGCCCAAACGTCAAATGCAATCG AATGGCTCGTCTCGATCATCCAGTGTTGATGCCATGGAAACTGCATTCAA AGCACCTCTCCTTCCCTTCGAAGAGGATGCATCGCAAAGCCAATTCATgc ctaaaatcgatttttcatctttcgatttttcttttgataacaATCCCTGG TCCCGACTCGGTGGATGCGGCCCCATCGCGCCACCACCTGGTTTTCCTCA GCACAGCAACTGGATTCAAAAGAAGTAAGTGCCGAATGGTTTCTATTTTA AAATAATGGTACAACATCAAAGACCGTCAGGCTTTCCTAAAAAAGAAATG CTTTCAGCAATTCCATTTCACGGATTATTTTTACAGTTttcgttttatta tttttttggttcaCTCACACATGTCATGGGACGCTTGTGTCTGGCCTGTT CtgttttttggatatttttaagttgcagattttatttattgattttaaaC TAATATAGTGTGTTTACCCTTGTACATATAACCAACTCTAACcccttgtt ttattttttataataattatataCCTTAGAAGATTTTTTGTTAACGTTTG GAAAAAGTGAAgattttttagataatttaagGTTCAGAAGTTTTACGTTC TTTATATGGTTTTATTATCGTTTTATATAGTAATTAGTCCAAGTTTCAAC ATAAGGCAAGTTTACTactaatattttaaaatttttaatggTTCCAGCTG GGTTTTAACTACTCGAAAGAAAGCTCTGaaagtcaaaaaagaatttgaaa ttttacttcTCACCTTACCTTAATGAAATAATTCTCTTTAATAGACTATA CTTGGCTTAACCGATTTTAGTGTTTATGTTTTAGCAATTtagttccattt tttgaaactattttatttcttaaTGTTTGTACATTTATGCAAGACTGTTT ACCGTTATTAGGACTTTTTTACCTTaggtttaaaatatattgatgtTACT ATTGAAGAATTGTGAGTTCGTATTTTCTGCCCAAGTAATTTAGTATGCCA CAACTTTATATAAAGATAGCTGATATGATTTGAAGTGAATCGGATTAAAA ATGTATAAGCATAGCTTGATAAccgttcaaataaaaaaacgttATTTTCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047202TCONS_00047202Clytia hemisphaericatranscript
TCONS_00047203TCONS_00047203Clytia hemisphaericatranscript
TCONS_00047204TCONS_00047204Clytia hemisphaericatranscript
TCONS_00047205TCONS_00047205Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
boule-like-1bTCONS_00047204-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_123supercontigscaffold_123:305747..310246 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.13 7.51 10.32 15 103.15 80.39 208.3 220.19 145.85 130.09 90.02 75.61 0.51 0.74 0.02 0.07 0.44 0.39 0.42 0.11 0.67 0.35 87.3 74.71 0.18 0.24 4.19 5.5 83.82 95.17