XLOC_030186 (gene) - C. hemisphaerica

Overview
NameXLOC_030186
Unique NameXLOC_030186
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_127:82272..88839+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030186 ID=XLOC_030186|Name=XLOC_030186|organism=Clytia hemisphaerica|type=gene|length=6568bp|location=Sequence derived from alignment at scaffold_127:82272..88839+ (Clytia hemisphaerica)
CTCGATTTCATCCAATCAAAGAGATTTATGAAACCAGACGAAGCTCGGTT TCATCAGCAGATCGATTTCAATTGAGCTAGATCTTACAAGAAAGTTTGCC ACAAACAAATCTACCGGCTTTTGTACGTCAACGGAAATTGATCGCAATTC AAACCCCAAATAATGAAGCTGATCTTTTTGACATTGCTTGTGTCCACCTT GGAAGTGGTTTTGGTGGATGGTTATTTCAGTAACCTCAGCGAATTACATG GAAGGAAAAGGAGCATGAGACAGGTAAGCTTTTATTTTTCCAATCTTCCT CATCGATAAACGATAAACTGAACTCATCTTTACTCCCGCAAGGTTGAAGG CGATCTTAAAGCACTTTGCAAAAGAAAGTACGCAATCTTCAACGGAAGTA TTATGAATACAGTACAGTATGTAATTTTAGATATGCTCTGAAAAGGAGAC ATTATCTAAACTCAATGCAGTGTTTCTAAAGGtcttaatttgaaaataaa cacCTTTGCACAGTATTTTTGTTAGCTAAGCCGTGTTTTACAAAGTGTTG AGTCATCGCTCAAGTTTCAGATTAAAAGTTTAGGTCAAATTTTGTTCATA CTTTAATAAAGAAGTCGATCTCAGAGAAATTCTAATAGACAGAGAAATCG TTTGTTTTAGAGTGCAAGAAATCACATTTTGTGTTTTATCTTAAAAACTT CTGATTTAATGAGGATATAATTATGGTTTAGCCTTTGAACTCCTTCATAG GAGACCTAAGGCCTAGACAAAACATATTTTGTAAGATGGGAAAGTCTTGA TTTGTAATATTCAACTCAATATTGCATCATCACTGTATTATTCTGTTGCA GCTTCAAGTCAACTATTATTACTGTGATACATTGCTATTGGGTTTTCTAT GCTCTATATCCCTCTATATCTTATTCTTCTCGCTATAGTTCTTGTCTTAT ACTCCTTGTGTTTTCACAAGCTTTAAAAGTAGATTAGTGTCGGATTTTCA TTGACACTTATAACTTACTTTCTTCAATTAAAATTCTGTTGACCtatttt gtaacattttccCTGCTTCTGAATATCACTCCCTTTTTTATATTGTTGCC TCGTGTTCGTGAGAGATAATCACCGAGTTGAAGCCACAGTTATTATGGTC GGAAACTTTTGAAATGAGTTGTCATTTCGGTTTATGCAAGGCACCGggag gttcaaaatttcaatcaacTACTTCTTGTGTAAATCAGAAATATGTTGAG TATGGCTTTCGATCTGCATTGTAATGTTACCACCCCTATTTCACTGGTAN ATAGACAGAGAAATCGTTTGTTTTAGAGTGCAAGAAATCACATTTTGTGT TTTATCTTAAAAACTTCTGATTTAATGAGGATATAATTATGGTTTAGCCT TTGAACTCCTTCATAGGAGACCTAAGGCCTAGACAAAACATATTTTGTAA GATGGGAAAGTCTTGATTTGTAATATTCAACTCAATATTGCATCATCACT GTATTATTCTGTTGCAGCTTCAAGTCAACTATTATTACTGTGATACATTG CTATTGGGTTTTCTATGCTCTATATCCCTCTATATCTTATTCTTCTCGCT ATAGTTCTTGTCTTATACTCCTTGTGTTTTCACAAGCTTTAAAAGTAGAT TAGTGTCGGATTTTCATTGACACTTATAACTTACTTTCTTCAATTAAAAT TCTGTTGACCtattttgtaacattttccCTGCTTCTGAATATCACTCCCT TTTTTATATTGTTGCCTCGTGTTCGTGAGAGATAATCACCGAGTTGAAGC CACAGTTATTATGGTCGGAAACTTTTGAAATGAGTTGTCATTTCGGTTTA TGCAAGGCACCGggaggttcaaaatttcaatcaacTACTTCTTGTGTAAA TCAGAAATATGTTGAGTATGGCTTTCGATCTGCATTGTTATGTTATGAAT TGTACCACCCCTATTTCACCGGTACAACTTAGAACTTTCTGTTAATTTTC CAAGGAAACGTCGGTTGCATTGAAATTTGAAcaagttagattttcatttc tgCATGTTTGgatattggttgttttttttcaatctgtcattccaACAAAA AATGTGAACATAACTTTTTCATAATGCTGTTACTTGTTGGTTGCGATAAG AATCGCCCTCCTTGAAACAATGGTCCATAGTATCGACACatagataaaaa ataaaccCTTTCCCTTTTTTTATCGTCAGTTAAGGTGAGAAGCTACGAGA CCTCTATCATTCTATAGAAATATTTGTCGAGACCACGCCCCTGATATAAT CAGTGTTAGAATTGTGGTTAGGGTTAGCTCCATCACGAAACATATTTCCT TTATTTGATTATCCTGTTCCTTCCTTAgatattcttttatttattcCCGT TTAGCCTGAGAAATTTATTATCCTAATTTACAGGATATCAATTTTTAATG CAgcgtttttatattttattttgtgaAGAGCTACTCCTGAGAATCATTCT AAACTGTTGGTATCATAGATCCCTTTCCCCAAATCGACATGAGTTCAGGA CTTGTTTGACAAAGTTTCTTCCTTTTACGTGATTCCAAGGAATGATCTTA AGGGGATAATTTTACAAgatgtaaaataaaaacaattgaatTCTTAGGCC CTCTTAGGGATAAAAAGTTGTTCTACTTAACGAAAAATTATCCATTACTC ACAACAAATTATGTGATCATATTCTCAATTCGAATCTTTTGGTCAAAACT GAcccttttgtttttaaacattttttgggaTTTTGATTGAAATAAGAGGC CGATCAGTGACCCATATTTACCAACTTTTTGAGTAAtgtaatattttcaa agtcGTTTTTTATTCTTCCCTTCATAGCTCAGTTTATAAAAACTTCTGGA TTTTTAGGAGGTTGAATAGCTATAGGAAATGAAAAGCTTTCTTCCAAAAT ATACTTgaactttattttcaaaaacgcCCCTGTCTCGGTGActcgaaaaa aataattgagATAAATGCTAATGGGGCTAATACCGGTGGGGATGAATagt ttcttattcttttaatCTTATTTTCAACAGAAATGGAATTAATAAACATC AAAGTTTTAATACCTCCTTAGACTGCCATGTCAGTAGGGTATCACGCGGA AAAGGTGAGCGTGGGAGTTAGGGAAGCATAGGAAGAAAGTTGGCGGTGGC AATTGCTGAAAGCTACTCTGTTCATCAGCAGCCTTTTACCAACTTTTTCT CGCTCTCCTACGCACCTATTTTAACAAACACCCTCCGCCCTCAGACATTA ACAGAATAGTTTATTAGTATACGCCTTCCTCaatgggtaaaaaaaatttt tctagttatagtcaggcagctgaggtcacataaaaaagtgcagtagctac ttaaacagttgttttcaatagataTGACCTTTCTGAACAAAAAATCATCA ACCGGAAAATATTTACCGGACGCGTCCGGTAATTCGGTAaccaacataga catattatataccaatcgacgcgttttttggcgtagattaagaaaaaggt cagtaactatgtctgaaaatttgataataaaaagttaaaagcttccgaag ttttgatgacgtcatatttacactttctttaagatcaattttctcgagtt aagttagttgagaaatcatatatatccacttcaaagtcttctatatcgat ttttgagagctttcgaatggcggtcttagatttcgattttgataagtttg attttttgattttttttcgtctcggacaggtaaaattgacgttaccgACA TAGAGGAAAATCGTTCtaactttttatagcaaaattttcagatatggtta cGGACCATTTTCTTAACCTACGTTAAAAAACGCTTCGATCGGTATAGTAT ATAATATGTTTATGTtggttctcaaaattttttcagtatGCCTATGGGCA CGCATGACGTCACCAGGTTCTAAAATATTaccggacacgtccggtaatta atttcaacaactccggttgatggtttctagatatctaggttgtatatttt caattaaaagtggtttgggattgttcgcaccccgtccaatttttttgtga cctcagctgcctgtctattaGGAAGATTAGTTTCTCACAGGTGAAAGTTT TTAATTGCCAGTCTTTCCCACTGTGTCTATAGGGGAATGACTTGTGTCGA AGATGTCATTATATAATATAGTGTCGTCCAAATGGTAACCTAACACAATG TTGGTGCAAAGGTTAATCACTACTTATCAAGTTTTCACCATCATTGAGTC AGGCCCATTCTAACGAAACTTGACCCAGTAATATTTAATATTCAACTTTG AtgtcaacaaaaaaaatttttttcgaaggGTCACTGAGAGAGATGCTCCA AAGCGTTCACGACTCGTTGAGATTTTATATCCGAAGTTGGTTTTTTACGA CGAAAAACTTACAGTTTTGAAGCCGtgtataaaaaagagaaaatacaaTA GCTACTTCAAGTTTCAACTAGTTCTAGATACCAGATTCCCTTTGAGAAAA CAAAACACGTGCTTCTTATTTTTTGTGCGTCTTCACAGGTCAGATTATGT GATCTTTTTCTTCAAGATAGAaacattttatgactttttcaggcaaaaat taaaaattcatcGGGAACAGGTTTGACGATCAATCGAAGTTCTCAGANTG Ataagtttgattttttgattttttttcgtctcggacaggtaaaattgacg ttatcGACATAAAGGAAAATCGTTCtaactttttatagcaaaattttcag atatggttacGGACCATTTTCTTAACCTACGTTAAAAAATTCTTCGATCG GTATACAATATGTCTATGTtggttctcaaaattttttcagtatGCCTATG CTTCACAGGTCAGATTATGTGATCTTTTTCTTCAAGATAGAAACATtagg caaaaattaaaaattcatcGGGAACAGGTTTGATGATCAATCGAAGTTTT AAGCATAGCAGAAAAATTTATTACCTAAAAAAGACAAGATCAACGAGTTC ATTTTTATACCGAAAAAGGTTTGAACTAGGTTATATAACTTTAGGAATAT TCAGTTTCAATAAACACACGCCACAAGGTCAAAGTGCCTCGATTCAAACA GTACTTTGTTGTGCGTAGGACGAAAGACTTGATGCTTACGTCATCAAAAT TACCGTTCCCCTTCTCTCTCTAAATCTTTCCTATGGTAGAAAAACTTCCT TATTGATGAAGAGTTCGATACGAGCTTTTATTCGTGTATACGAAGAGATC TCGATCTATATTCTAGTAATCTCTATGTTGAAGCCAGGGGTTTTCCGGCG TATTTTTATAAATAATAATATGGAGGAGGGGGTCTTCTATTCTTctttaa tttattttcgttCATTTGTTGATGTTATGTTGCTGGATTAGGGTTAGTTT ACTCCTTCTTGTGTAGAGGTTGAGATCTCATTGAAAGACAATTTAAATTC TTCCTTATTATGGTCAGAATGTTatgaacaaaagaaagaaaacgaaGTAT AGgtcataaaaaagaaacaacAAGTCGTACAAATTATACGACAGACAAAT TACATGCTAAGaaaaattatttggaattttagatcttgttttgaatagaa ggaaaattagaaaaatgaaGTGTACAGTATTGTTGATAGCGATGTATTTC TCACAAATCAATGCTTACTTTCACCAACTTAGTGGATCTTATGGTAAAAG agaagtcaaaaaattgaaagattcaAATGTAAGATTTTCAGCCGTGTAGT TTAGTTGTTTTTATAGCAATAGAAACCCttattatttcaaatatttgata ttttactTTCAACATCACCATTTTTTTTGTGCCCAATTATCTAGTAATAG TTTTCAATTTCACGGATTGATATTTTCATCCAATTTACGACCATAtgttt tcaacaaatttttagcGCACATGTCTAATCCCGTGAATTGGAAATGGCAC TGACACAGCATTTCTTTTgctaattgtttttattggatttctttcagttt tacgaCCAATTAAGAAGAACGACCGTCAACAACCAGCGTGACGCCCAACT CGAAAATATCTGCCGTCAAATCACCGTCATATGTCAACAACGCTTGCCTA GCAACAGCGATGACATCATCAAACAACATGGTAGCGACCAAAACAATATG GTAGAAGAAATTATGGCAAACGATTACAATATTGATGACATCACTGGNAT ATGGTAGAAGAAATTATGGCAAATGATTACAATATTGATAACGTCACTGA TAACGAATTTGTCTTGGCAAAAGTTCCAAAGTCACTGAGGAGTAAAGCTA ACAACAAAAGACTTATAAAGAAACGCTAATCGGCTCCAATCCAAAGATTC TAACACTTGACAGACATGACATCTTAAATTTTGAACCCTCttaaaatatc agcgtttttaCTATTTTCGTTGTTGTAGAAAGATATTTTTCGATCATGTA TTTAAACTTCTTTATCCTTTTCAATCTAATTCAATTTGGTATTTGATGCG TGGGTCAAAATGGAGGCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047381TCONS_00047381Clytia hemisphaericatranscript
TCONS_00047382TCONS_00047382Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047382-proteinTCONS_00047382-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_127supercontigscaffold_127:82272..88839 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.07 0 0 0 0.08 34.12 37.48 64.97 45.38 59.19 51.58 11.23 4.65 0.08 0.14 8.68 8.96 20.82 19.91 13.04 13.6 9.21 12.33 13.52 11.86 10.64 7.73 0.74 0.67