XLOC_032509 (gene) - C. hemisphaerica

Overview
NameXLOC_032509
Unique NameXLOC_032509
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_200:127434..138479+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032509 ID=XLOC_032509|Name=XLOC_032509|organism=Clytia hemisphaerica|type=gene|length=11046bp|location=Sequence derived from alignment at scaffold_200:127434..138479+ (Clytia hemisphaerica)
GCCAAATTTTTTCATATCAAAAGGCAAGTAAGCGTATATTTTTTAGTATT ATAATTTTCGTTCATGACATGAGCTTTAATGACTCACCTTTTACTTAAAA TGCtaactgaaaatctttttaaattttctttatagAGGCTTTCTGCGTGA TCTTTTCTCACTCTATCGATTCATAAGATTTGTGGTATCGCAAAAATACA AAGCGTGTTTCTTATCGCAGAAATTTGTGGTTTAAGCGGTACCACCTCTA CGTGATAATGAGAAATTACTCAAATAGAAACCACTCTTTCTTTTGCAGTA GAAATCTCCCAAGACATGGTTTACACGTTCAgtgatattgatatttttat cgAAGTTGTATTTTTAGGTTGACTCCTATATTCGTGATTGATCAGAACTG acagaaaactttttgaaacgcGTTGCAGTCAAAGTATTCGTCGAAAATGG TAAGAGATTTGTCTTTCCTCGTAACCTATGCTTTCTGTCTACAATCTTTA AAATCTTAGGGAAAATGTCCCTTTTGAAAGGGATGGTTAGCATTTGTATG TCTTTCTTTCCTTTCTAATTATTTAAGCTTTAGTTGAGACATGCAAatgt tttcttaatttttcagagaGAGTGTATTTCAGTTCACGTTGGACAAGCTG GTGTCCAAATCGGAAACGCTTGTTGGGAATTGTACTGTTTGGAACATGGA ATCCAACCTGATGGTGAAATGTCTTCAGACACAACCACCAATGACTCGCT TTCCACTTTCTTCAGCGAGACGGGGACTGGCAAACGTGTCCCCAGAGCTG TCTTTGTTGACTTAGAACCTGCAGTCATTGGTAAGTGATattcaaaaaga tttgaaatgaTTATGCTTAAATCATTTTAGAACAAGATCCTATGTGTAAT Acggtcaactctctctaattcgaatctctattattcgaatatttctgtaa tttgaacaaAAACAAGATGCTTTCATTTTTCACCACACTCTCctctaaaa ttacaaaataagatttagttattttccttcaaaaatacacaaTGGACAGT TTTCATTCTACCTGTCATGGTCTCCTGTTCACATTGCACTATTCCGTTAT CTCCTTCATAATTTTCCATGTTCAAAAACGATATGCTCAATTACGAATGA TCCCAAACcaataaaaacttttcattaTTTCTCACTAAAAGTCTTACACA CATTTATAACAACTCTAATTTAAATTTCACATATTCGATACTTTTTTTAG GCTCGTCATGCTAACACGAATTATTTATTTAATGATAGATCTCAATCTCA TATCATCTTTGGAGATTCCGCGACCACATGCTAAATTATGTTTGAGTTGT CCACAAGCTCCTATGCTCTCAAGGTTCCAAATATTAAAACGATATATTTA ATTATGAATAATCATGATTtgcatataaaaatatttttcgtactCCATTA CCACATTTTCTCGCTAAAAATATGCAACATGACCCAAATTCATCTATCAT ATTTATGGATTGATGAACATATATGGATTGACAAGTTTGacacattttcc ttcaaaaatacacgaTGGCCTTTTTCATAATATTATTAGCCTTCTCacat gaatttatttttttatcacaCCTTCCTTCAAATATACAAAATaagtataa aaaaattctacacattttccttcaagaatacacaATCGATAGTTTTCTTT TAATTGTCTGCATTATTACGTGATTTCCTccataacttttcaaaaatcta agaTAGTGGGTTTCAGCCGAACTAATATCTTACTAACCCATAACCACTTT TATCCATGACAACTACTTTAGCTTTTCTCGATGTGCACGACCCGCAAACC TCATAAATTTCGGTTACATGCAGGATAACCCCTTCATGATACCGGTTTTT ATGATGGTTTTTTTTAATGTGAGGTTACCTCTGTTTGATCTGTTTAATTG GATTCAGCATGACTTATTCACCTCAAACTTACTGATTTATAATCGAGTGT CTGGTTTTTTTCCTCAAACATTATACACTACTAGAAGAACCAGTTCTCCA TTTTTAGGTGAACCTTACACATGAACCTTTTTCAAGtcttaatgaaaatt ttcatcttttaatatgttttattatatagatGAAGTGCGTTCCGGTACAT ACCGTTCACTTTTTCATCCGGAACAATTGATCACCGGAAAAGAAGATGCC GCAAACAATTACGCTAGAGGACATTATACCGTCGGTGAGAATTAAATCTT TTTATCCTTTAAGAATGATGTCAAGTTTTCTATCTCTTTCAGCTAAAATC AACAAATAACGAATTTCAAACTCTCTATACTCATCCAGGGTAAAAGAACA CAAAAAATCCATCTATTGATTCTACCTAAAAGAGTGAATCTAGAATTAGT CAAAAAGAGCGAGTGCCatcctttttttctaaaatctgaGTCGTTGAATA CTCAAATAAATGAGCAGGTCGAGTTTGCTAAGTCCATTGAGGAATTCTCT GATATATTCACATCTTAGGGAAGGAGTATATTGATCAAACATTGGATCGA ATCCGCAAATTATGCGATCTTTGCACCGGTCTTCAGGGGTTCTTGATTTT TCATTCGTACGGAGGAGGAACTGGGTCCGGCTTCACATCCCTTCTCATGG AACGTTTATCAGTGGAATATGGAAAGAAAGCTAAGCTAGAATTTTCTATC TACCCTTCTCCAAAAGTTTCCACCGCTGTCGTTGAACCTTACAATGCTAT TCTTACAACCCACACTACCTTGGAGCACTCAGATGTCGCTTTCATGGTTG ATAATGAAGCTATCTACGATATTTGCAAACGTAATTTAAGTGTTGATCGT CCATCATATTTCAATCTGAACCGTTTGATTGGTCAAGTGGTTTCCTCTGT TACAGCTTCCTTGAGATTCGAAGGAGCTTTAAACGTCGATCTGAATGAGT TCCAAACAAACTTGGTCCCATACCCCAGAATCCATTTCCCAATTACGTCA TTTGGTCCTATCATGTCAGCTGAAAAAGCGTCTCACGAAAATCATAATGT CCAAGAAATCACCAATGCTTGTTTTGAACCACAGAATCAAATGGTGAAAT GCGATCCTCGACATGGGAAATACATGGCTTGTTGTCTTCTATACCGTGGC GAAATCGTCCCCAAAGATGTCAACACCGCAATTGCTCAAATCAAGACCAA ACGAACCATCCAGTTTGTGAATTGGTGCCCAACTGGATTTAAAGTTGGGA TCAATAACAATGCCCCTGTCGTTGTTCCTGGAGGTGATTTAGCTCAAGTC AAGAGGGCTGTTTGTTCCTTAGCTAATACGACTGCTATTGCTGAAGCCTG GTCAAGTCTCGATCATAAGTTCGATTTGATGTATGCTAAACGTGCTTTTG TACATTGGTATGTCGGTGAAGGTAAGAGAATAATGAGAATAACCCTGTCT CAAGAGTTAGAATTCTCAGTATAGTACTGTATTGAGGAAGGAAACCATAG TCTTAATGGCAGACCTCTTCAAAGCTACAGGTAGGGTATAACAGGCCCGA ccgaagcggggagactggggagactggggagacttcagcctccccagtTT TGAGCAAATAGAAttcttttctcaaattcctagcaaattttatctcattt tgagccttcagcctccccactttaacggttgttccgccggacTTGTAAGG ATACAAGATTTCAGCATTCTAACGAGGCGCCAATACCAACCAAAGCTTTG ATCAATACATATTCACAGCGGGTCATGTATTACTTTTAATTgggctttta attttttggttaACCTTCTCACTCTCAGAGCAGTTGAAGGCAGTGAATGA TTTTACTTGTTGCTTGAATCGAATGAGATTGgctcagatgagatggagtt gttgtaaaaactccatcttgtCCCTATTAGGTAGGTTGGTTTATTCACAC TATTATCTGTACTGATTTCCTTATCTAGGTATGGAAGAAGGAGAGTTCTC CGAAGCTCGTGAAGATTTAGCCGCCTTGGAAAAAGATTACGAAGAAGTTG GAATGGATAAtgttgatgaagaagaagatgatgaacttttttaaatgacg AGATTGCTCTATTGGAATGATATTCTCGAAGAGAACTAGAAACTTCGTAC TACTTGGTATACACTTTTTGTTAAAGATCCagtaaatttttattcaaatt ttgctgTTCTAATTTTTTGAAAGCCTCAAATTGCATTATAATGTTCTCAT CTTGTCTTATTTTTAGGACAAAAGTGGggcatttttttatcaaaattgtg tTTAAGGTGTTACGCTTTATAGCCGATTTTTGtcttttgacacttttttg CTACAAATTCAGCaattccaggctcagcattATTGAGGATTTCGAGCAtc gttgttttgaaaaatttattcttataaaaagcgagTTTAGCTTACGAGGA TGGCTCAATGCTTTGAACTTTCACATCTCAGTTAAATTGGTAAAATATTa tgtttttgctgtttttgctaTTGTATATAGATGAAATACTGTAAGTGAAC ACATCGTTTCCTTTCgtaatttattctttttttaaatgtttttgtaaaat ttgaaatgaaaagaatTGATGTCATGTCATTTCTAACCAAGCTGTTTTAC GAGCCTTCGTTTTTAGAAAAACTCTTGCTTTTTACCTATTTGTCCTTTTT ATGTGTTAGGTCAAAACATTTTCGACTAGGTTATGCATAAATCATGGCTC GTTCTATTCACCAATTGATTTGATGTCTCCGGAACGTAGTGATTTGAAAT GAGGAAAAGATTTGGACAAAACAAACAGCTTGAGTTTATTGAtgtaaatg aataaaaatatttcacagcGGTCCCtttttgttataagaaaaaGCTACAG GCTAGGTTACTGGCTAAGAACATTATGTTAGATTATAGACCATTCTATAT ACCCCTTTCATATTCTTAGAATTATATTGCTAATCGACTTTCTCATTTCA GAAAAAAGTATAGAAAATATTGTCCTTCATTTGGTTTCACGTGGATCCTT GGTTCGATGAAGTNttttattcaaattttgctgTTCTAATTTTTTGAAAG CCTCAAATTACATTATAATGTTCTcatcttgttcttatttttaggacAAA AGTGGggcatttttttatcaaaattgtgtTACGGTGTTACGCTTTATAGC CGATTTTTGtcttttgacactttttgcTACAAATTCAGCaattccaggct cagcattATTGAGGATTTCGAGCAtcgttgttttgaaaaatttattctta taaaaagcgagTTTAGCTTACGAGGATGGCTCAATGCTTTTAACTTTCAC ATCTCAGTTAAATTGGTAAAATATTatgtttttgctgtttttgctaTTGT ATATAGATGAACTACTGTAAGTGAACACATCGTTTCCTTTCgtaatttat tctttttttaaatgtttttgtaaaatttgaaatgaaaagaatTGATGTCA TGTCATTTCTAACCAAGCTGTTTTACGAGCCTTCGTTTTTAGAAAAACTC TTGCTTTTTACCTATTTGTCCTTTTTATGTGTTAGGTCAAAACATTTTCG ACTAGGTTATGCATAAATCATGGCTCGTTCTATTCACCAATTGATTTGAT GTCTCCGGAACGTAGTGATTTGAAATGAGGAAAAGATTTGGACAAAACAA ACAGCTTGAGTTTATTGAtgtaaatgaataaaaatatttcacagcGGTCC CtttttgttataagaaaaaGCTACAGGCTAGGTTACTGGCTAAGAACATT ATGTTAGATTATAGACCATTCTATATACCCCTTTCATATTCTTAGAATTA TATTGCTAATCGACTTTCTCATTTCAGAAAAAAGTATAGAAAATATTGTC CTTCATTTGGTTTCACGTGGATCCTTGGTTCGATGAAGTCTTATTGGTTG GTTCCAGTGTCCAGTAGTCTTCTTTAGGAGCTGTAAGTTAACAccttaat tataagaatatcttactTTTTGACAGAGGCTTACAAATAAAAGATGCGTT TTATTATTATATGcatatttgaatttttcatgGGGTTTTCTTATTGTCTC ATCACAAACGACATAATCTTATAATTAGATCTTTGTTATCACTCGTAATA CTCATTATGTTGGAGAGCTATAGATAAAATGTCTCCTATTTGTTGATAAA TAAGCCGCCAACAATAGGAAAACAACCAATTAGAAACGAGTattgtctac cattttgaattcaCAAACGTGGCTTTTATATGTAATGAAGTAATGAAGTG AGTTTTAaagtttgacatttttgaatttcgttTCAATACGTTAAACGCTC ACTGGAGGAAAAACTTTTATCGTTACTATAGTTTTTTACTAGTTTGCAAA AATGGTGAGTTTTCGCATTTTTTGGCTCGTTTGCTAAAAATGACCATTTA GTCACTTGAAGATTGTTGATGCATTGTTGAGAACAATAGATATTCGATTT CGAACAATAGCCAACTATAACGAAATATATTTTGTAGAATTTGACGGCGT GGACGTTCTAAAAGCAGCCTAACTgactaaatatttcttttttctcagaG AGAGTGTATTTCAGTTCACGTTGGACAAGCCGGTGTCCAAATCGGAAATG CTTGTTGGGAATTATATTGTTTGGAGCATGGAATCCAACCTGATGGTCAA ATGCCTTCAGATAAAACCATTGGAGGGGGAGATGATTCATTCAACACTTT CTTCAGTGAGACTGGTTCTGGTAAACACGTCCCCAGAGCTGTTTTCATCG ATCTTGAACCCTCAGTTGTTGGTAAGAGCCAAAGTTATTTAATAAACTAA TTCTTATTTTTCTGCTCACTGTATTTTGTTTGGTATAGACACAGCGATAT TACAAAGATGTCTCTCGTAAAGCTTTAAACCCCTTGTCAattaattcttg atatgcgtaagtcatttttctagcggaaacacccgaaaaaatccgggatt tgacccctctctgttactaaaaatagaaacacagaggtcaaaatccggct tttttgggtgcttccgttaaaaatatgacgtcatcttgacttacgcatat caagaataagaGAATTTAAACCTTAGACGGCATTCCAAACATTTACAATT TGGGACGGGCTTAAGACTGAAAACATCCGTTTAGATCAGCTTTTTCTGAC GATGATGGTATAATAACATTGTTGGTACTGCCTCAGTAATACTATTAGAA AGTAATTCATGCCAAACTGTACCACGATGCTAATGAAATTTCTCTTCACG TGAAACGCCCTGTTTGCCATTCAAAATGAACATTAATTTTCCCTCTTTGT TATCTACTAATTAATTTGCTTGCATGGAAAATAATGCGGTTACCATAGCA ACTTGATTGCTAGGAGGTATACAAAACAACGTATTTCTATAGATTCATAT GTTTTGATTCCACGCCTTATCGAGAATAATATTTGCGCTTTTAGAAGCGT TAGGTCACACGGTTTCTAAgagattttcaacaaaaaactttttacacttt tttcataaGGTATCAAAATCTAGCTGCCTACttttagtagagggcatttt gtaaaatcgctcgactgttttgttagaagcacttgttatacatctttgga aagctaaggggtaggggaatcgaaatttctatgtttccaattttttttcg gacactttggtgtgattttcggacaaatatgacggtctcaggcaaaaatc atagggttaaaaattaatgaaaattttagctcgagaaaattgaaacctgt tgtatatttttggaaagctctcaaaaaaataggattagagatatattgca agtataggtgatttcagtacctaactcgagatattgagcttcaaaaagcg caaaaactggacaaaatagctgtttctggctgaaaaacacggttttcaag ggttaatatctcgagttaggtacaaaAATCACCTaaacttgcaatatatc tctaatcttatttttttgagagctttccaaaaatatacaacaggtctccg ttttctcgagctaatattttcattaatttttaaccNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ttcccctaccccttagctttccaaaaatgtataacaagtgcttctaacaa aacagtcaagcgattccaaaaaatcgaacaaaattccccctactatttcT TACAAATccctgaaagtttttttctttcaaatcttttaCTTATTCATgaa attcatgacgtaatgtttttaacggaaataccccggtttaaGCAAGTAGT GACAAATTTAAACCAGACAAAAGTTACATGAAATTTGCTACttctggcaa aaaccggggtctttccgtagaaatcattacgtcattaatatcatgaatac gtaACAGAATAACATTCTTTCTTGTACATAATAGCTTTTGGAAATCCTTG CTAAATCTTCTAATTAAACTTCGTTACCGCCCTAGCAATTCAAAAAGGAT GAGTCTTTATACCGTCTAATTGCCgtctttttgaaaaacattcttTGACA TATGTTATCAAAATTGATATATCTTTTACTTCATAATTGTAAAGCTGTAT GGCTCTTGCAATATGCATTTGCTCGAAATTTGTTGCCAAATTTTTAGCAA CCTCCTGTTTTGTTCTCTAATCACCCAAAAACCTCATTAAGCAATTAATT ATATTTCGACCTCATTAACGAGCTATATCTTCTATTTTGTAGACGAAGTG CGTACCGGTACATATCGTTCACTTTTTCATCCGGAACAATTAATCACCGG AAAAGAAGATGCCGCAAACAATTACGCTAGAGGACATTATACTGTCGGTG AGgatttttttgatatttgaagttaaattattattgatgtttgtaaaaga attttgatattttacctCGTGGATTTTGCACTCTATTGCAGAGAAAATTC ATGAAGACACTAATCTGACGATATTGTCTTTATAATTACCGTCTAGCTTC AAATGGAAAATTCGCCAACCTGTTAATGACCTTCTTTTTCTCTCTCTTAG GCAAAGAATACATTGACCAAACCTTAGACCGAGTCCGAAAACTGTCCGAG AATTGCACCGGTCTTCAAGGATTCTTGATCTTCCACTCTTTCGGTGGAGG TACCGGATCTGGATTCTCATCCTTGTTGATGGAACGTCTCTCCGTCGACT ATGGAAAGAAGTCGAAATTAGAATTCGCTATCTATCCAGCACCGCAAGTC TCCACAGCTGTCGTTGAACCATACAATTCCATCTTGACCACCCACACAAC TTTGGAGCACACTGATTGTGCTTTCATGGTTGATAATGAAGCCATTTATG ATATCTGTCGTAAAAACTTAGATATTGAACGACCTTCCTACACGAACTTG AACAGATTGATCAGTCAAATCGTCTCCTCAATCACAGCTTCCCTTCGATT TGATGGATCCTTGAATGTTGACTTGACCGAGTTCCAAACTAACTTGGTCC CATATCCCAGAATTCATTTCCCAATGGCTACCTACGCTCCAGTTATCTCC GCTGAGAAAGCTTTTCACGAACAGATCACCGTAGCTGAAATCACCAACGC TTGCTTTGAACCACAGAACCAAATGGTGAAATGCGATCCACGACATGGCA AATACATGTCATGTTGTCTACTCTACCGTGGTGATGTTGTCCCTAAAGAC GTCAATGCTGCTATCGCCAACATCAAAACTAAACGAACCATCCAATTCGT TGATTGGTGTCCAACTGGATTCAAGATTGGAATCAATTACCAACCACCAT GTGTTGTCCCAGGAGGTGACCTCGCTAAAGTCCAACGTGCAGTTTGTATG TTGTCTAACACTACTGCTATTGGAGAAGCCTGGGCTCGATTGGATCATAA ATTCGATTTAATGTATGCCAAACGTGCTTTTGTACATTGGTATGTGGGAG AAGGTAAGAAACCGAGGTTTTTTATCATGGAATCCTGTTTATTTCATCTT TCAAGTTAGTCTTTTTGCAAAAGTGAGaaacattttgttttaaaaagttc ttttaCCGCAAGGATCCCGTGACGTTTGAAATTTGTATTAGACCATAGCC TACAAAGTCAACATTCGTTGGTTTCATCTTAACCaattacaatcatggtc gaaatctattgagaattaagcttatttcctcgttttttgaaatttggagt tcgggcgagaaagttgattttgggccatctctcaaatttcggatatttca atttggctcgggtttatagaccTCCAGACTATactatattatgagcctta ttggaccatttttgaacatttttgaacatttggatcctcagatcctaagg tgctaagtcttaagtctcgtgttaaaactcagagttaaaactctaccctt ccaacctactttagagcacttacaaatcgattgtggtttcaaaacttccc ggtggatttccctttttttctcaaatataacgaccatgattgtagcattC AGTTTCGGATGttattaaccaatcaaattttatttctaATCGCTTAGGTA TGGAAGAAGGAGAGTTCTCAGAAGCTCGTGAAGACATGGCCGCTTTGGAG AAAGATTACGAAGAAGTTGGAATGGATAGTGGTGACGCTGATGAAGCCGA AGATGATGAATATTAAATGCGAAGGAGCCAAAGACCAAATATGGAATTGC ATGCTTGAAAATGCTCTCCGTCACATTGACTATTTAATAAGAATTTGCTA CCATCGTGCCGTctgaagtttttttcatttatcattttTGCCATTATTTA ATGAACGAGGAGAATAATATTTCATTCATTCAAACTATAAATAACG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051292TCONS_00051292Clytia hemisphaericatranscript
TCONS_00051293TCONS_00051293Clytia hemisphaericatranscript
TCONS_00051294TCONS_00051294Clytia hemisphaericatranscript
TCONS_00051295TCONS_00051295Clytia hemisphaericatranscript
TCONS_00051296TCONS_00051296Clytia hemisphaericatranscript
TCONS_00051297TCONS_00051297Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00051293-proteinTCONS_00051293-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_200supercontigscaffold_200:127434..138479 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.49 3.88 4.14 3.63 8.84 7.37 159.56 172.88 172.53 113.75 202.34 128.64 504.76 504.74 334.81 316.21 525.28 534.44 550.94 831.11 188.31 178.83 82.78 101.96 239.87 161.37 40.7 18.34 2.44 2.9