XLOC_034232 (gene) - C. hemisphaerica

Overview
NameXLOC_034232
Unique NameXLOC_034232
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_242:1526556..1537595+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034232 ID=XLOC_034232|Name=XLOC_034232|organism=Clytia hemisphaerica|type=gene|length=11040bp|location=Sequence derived from alignment at scaffold_242:1526556..1537595+ (Clytia hemisphaerica)
CTCAAGTTTTAGGAGATAACATTTTTCACAGCTGAACAACCTCCAAGAGG TGGAGAAATAAACAAATCAATCTCTTGATATCGTTATTACTGACAACAAG ACCCCTTTATCCAGGACTTATGGTTTATCCCCTAATTGCAAAACTTATTA ACGTTTAAGCTGGACTCAGACTAAACTTGAGATttaatttaattcaaaat tggagctaagtAGACTAATtttaaaaactgagaaaaattcGACAACAATT GCACGAAAGAAGAAACTTCACAATGTTGTTTTTCTTggaaacaattttta tattttcggcCCTTCTTTACGTCCAGGGTAAGTACATTGTCATTTCTTTT AGTTATTGAACAACTTTCACAACATGGTTCAGATCATTTGGTACATACCA AACAAGCTCGCCAGGTgatcatcaaagaaaacatcaaaacaccactgcgt cacagacccgctgggaccccagccacactggaaaatttggctaaaacttc aaccccactgggaaattgaatttgaattgcactccaaaaccatcccccaC TGTATATTtcaagcttggaacaatagaatttctaacccccattgggattt cgatagaaaataTTTATCCTCGCTGTGGGAGTGGATAAGTTTCAccggag ctgtgagacaggggtctATCAAAGGATCGAGCAAATGTGATCAGCAGCCT cattagactagtaaactagtcgttgaaaccCATATGcaaaaaattcaagc tccaaataaaaagaatcgaagaggtgaggttgcgtgtcttttctgaattt caacgactagaagcttcttccctcaaaaaacgttgtttaattttacaact atttttaggtttttgagaatccacccaaacttttttgactaaatgatatt tcatagtaacattaaacataagaacatataaataaatgagcatttccaaa aatgaaataaacagaaagaaaaataaatgcaatcccgcacgggtcagaca tacagaaatctgtatgtctcaccttacgattttaggtgaagaaaaaaagg cgttggaagtagcttctagtcggttattttccttttctctcacgcgcgct gaatatttaattactgtttacattatttgattgacatttttattataagt aataaccgactggtttactagtctacagCCTCATCTTAAATGAGAGACAT ACATTATTGCATGGGATAGCATACATTTTACATCAATTTCGATATGACTT TAAGGAGCGCTGGCCAAGTGGTCAAGGCGCCAGCGTCTTAAACCAAGGgt tcgcggttcgaatccccACTCCTTCCAATAATCCCttcagttcatagata accGAGCCGGTTgaccgtggaccccgtgaaaataACCGAAAGACTGACTA AAAGTCTTAGATTATCGGACTATATTCGTAAACACGTTAATTAGCAAGTA TAAACAATGCAAATTATACCAAGAGATGATCCACTGTGATCAGTAGCTTC ATCTAGCATGAAAGGTATGCACAATTGCATGAAAACTTTACAACGATATC GATTGGACTTCCGTCGACCCGTTAATTAGCGAAGACTCGATAAGATACAA GTAATTACTTTAGTACTAATTATACTCGAAGTCGTTAAGTATACATGCTT CAAATCACGACTTCTTCACTGGAAACGAGGAGgaaatccaaatattttca ttcatttacTCGCTGTTTTACTTGCCTGTAAACAGGTCCAATATCGAcgg atatttcaaaattcactgTACTAAGCTGCTTCATACGTGAGATAgctatt ttaaaaagtttttcagcttttttatttcttgataAATGCATTCCTTTGAT TGCATTACGTACAAAAAAGAATGACTGCTTACCTATGTACCACTTCTCTT TTCTTGATCATCATTCGACTTGACTCGTCATTGAATTTatcctttttcaa aatttggaaccTGAAAATCAACGAAATAAGTGAGTTCATCTAGACCTTAT AGACTAGCTCCTAAAGTCCTAAATTATAATACGATTATCGTGTTGCTTAA CATCTCTAGTTTATGGAATGGAAAGGTAAGTATCGTTTTAAGGGGGCTTT TAGTCTAGACCATACATTAGCACGTGTTTTATAGGATACTTGATAGCCAA GATTGTCAAGGTTCGAGTTTAGTGGACTCTACTAATTCGAACTTTTATca atcgaatctttctataattcgaactaattctcagttcCCGTCAAAGGGAA ACTCTCGTAAAATACTTTCTTTAATTTgaatatttctctaattcgaacaa attcgACTTATTCCCGTTTGacttcgaattagcgagagttccctgcgtat tatcacaacagaattttcaatagaagtgatcgttgaactttgagtaatca gaaaagctgtttttccatctttttacattcttctggtattattagctttt ttatgcttGCTAAAAGTGCCAGATAATTATTAGGCCTCCATCAGTATAAC GTACATATATCCTGAAATACATGGGTCGAGATTGGTTTTCATTCTTCAAA TCATGCATTTTTTTTAAGCCTCTCTCTAGTTAGTTGAtcgaaattcatga tatgcaccctTGCAATGTCTTCATCAAGGACGCAACAACTGATTGgatgt aagtgacgtaaaatcagtcaagacgtcaatttcaaccaatcagctgttgg gtccgtggaagacattaaaatggtgcatatcatgaatagggaATCCAGGT ATTTTGTGATTTCGATAAATTCTCTCATTAGCCGATGAGCTTAAGATCAA TAACGTATCAGCAGGGTGTTCGTGCTGAAAATCATGGGTTTTTTTGCGGC GAATGTAGACATTCTAGACAAGAGTTAAACTTGCATTTCGGTTTTTAATA AAGCTCTTCTTTGATtacatttgacaaaaaaatgtaaatatttcctCACC TAAATACAACGCATTTCCCTTTCCAACGACCATTCGATAATTGGATGTGA TCAACTATTCGACGTGAGTCTTTACATtaattttgattcaaaattaGGAA AcctgaattttttgaaaaagtgaatTGCATGTAGATCTTCTGGTGGATCT AAATTAAATAGATTGGGATCCCCTTCCAAAGACCCGAGAATCAATTATAT TAAGCGGaataattttggcgggaactagaataggaaaaattcaattcatt catcagtattttgttttttggttCCCATTCCCCTAAATTAACACACCTAA GGTATTCACAAGAATAATTGAATGTCTTTCTTGAACTTCGACCAATCAAT ATAGGAAGCTTAGAGAAATATCAATTCAGATTCAATCATTGCAGTCTCAA TTCTGCTGCCAATCAATAGTTTTCTTCAATACAATCAATCACTTCTGGCG CCTTGAGTCACTAAATGACAAAATGTATTAACGCCTCTCTCTCTCATTGT GCATTCATTCTGTTTGTAACCAAGCAACAAGCTACGGCACAGGTTCAGCC CAAACGGCCTCTGCTTAATACTTAGTCTATGCTTAGGGTAAGTAGAAAAA TCCAGGAAAAGGAGTACCCCCACCCTaacttcgggtagacagctaatAAA TAGGGAGTCACCCATGCGGTTGAAAAACtttcttacttacttacttactg ctCGTAAACAGAAAATATCCTTGTTGTTTAGATTCGGAAGCCGTCTTATC ATGTGGTGACCCTGGTCCAATCTACAATGGTACAATCATAGGGAAAGCGA ATTTCAATAATGGTGGAATCATACGTTACAAATGCAACAAATGTTATGAT AGAAAGGGACCAAGCACTTTAATGTGTTCCAGATGGGGCCATTGGTCTGG AGATGTGCCTAAGTGTCTTCGTAAGTTACTTTAAAACAAAGATATTTGCA CGTTTCTGGTGGATTAAGAATGGATCATGGGAAATCTTTCAGTGATTAGG TTTCCTTCCATATTTACCTTAAAGTATAAGATTTTTGCGGTAAATAATTT GTTAGATGGCCGAAAAAGAGGAAATTCAATTTGGTCGTTGCTGAATACTT TATTACATAAGCTGTCGAGTcctaaaatagccaaaaatttGGGAAATTCA TATAAtgatttaaatttggcggataggGGAAAGGTAAATTTTGTCAGGAa ctttatcgaccgccggaggcggtttctttcatagtggtacgctaatctcg ttttgccttggctcattactttgtctaccatttactttcggctTTTTTAA NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNttaggcgttaataatgtgcgcgcgctctt ttgCGAGCGTGACTacgcgtgatggaaggcggtcgtttcagtgtggttta catccacactgtgacctagtaggAATTCCATAGGGGAGTGCACAAATCAT TCAAAAATAACCAGAATTCGATGGAGGTATTTTAGAATCCTGTAAAAAAG TGCAAAGGGATTTAAACAAGTATTTTCAATTCGGGGAGGTTGCATCACAA AAGGTAGGagaaatttctgaaaaagcccattGCAAAATTTATTATGTTTT ACAATAACATTCTAAATATATTAAACTCAAAATATCTCAGGCAAAACATT TAAGAACTTAAACAGTacttaaaacttaaaacaaaCAGCTTTGTAAATAT TTAGCGACAGTTTACAAACAAAAATTTCGTGCGTCATTCACACGAGAATT TATTTTCTTGCAAAACACGAAACAATCACAACACATAAACTTTCGCAAGG AAAACGAATCGTCCCAGAGAACTTTGATTTGTCATAAAGTTTTTATAGAC TATTGAGTCATgatagcctagaaatctaagctcgTTTGATTTAGTCGATA AGATAAAACTGATGGTTAGCTGTGACATTTCGGACAAACTTCATTAAAAT CCGCGATTATAAAATGCTATATTTTGTATTGTATTTATCTGCAGACACAT TTTTTGTCCTTCCAGCACTCTTCAATGCGGCTCAGATAAGCGAGAATAGA CTGCTGCCGTGCAGAGTGCACAAAACACTAATTGTTTGCCCTTTAGTCTT GGGAAagcaaaatacacgtttttttataagaacaaactatataagaacat aaggcttcgatatagccaaaatgttaagaacaagttaagaacatcttaag gctttgtggactctacaACACcatatttcttaagaaaatatggtcaaaaa tactcacaaaatggtcaaaataagaacatgttaagaagatttttaggctt aaaactgaaaacaTTCAAAGGCcgcaaaaattttggatgctcttataaaa agaacgtataatattaaaattttgaaaaaatcattatcTCTCAATGTCAT TATCCCACCAGCCAAAGAGTGCCCACCATTGGTTGTCAGCGACAACGAAA AAACCTTGACCGGCAAGAGGTATGGGTTCGAGTATCAGTTCACGTGTGAA GCTGGGAcggttttgattggtcgagcgaTAACACGATGCATGTGTAACGG CAGATGGTCTTCCAAACCTCCCGTATGTCGTGGTAAGATACACTTGTAGT GTGGTCGTTTGGTATTGTTTGTAGGAAAAGAATACAATCCGACTGAACAT TTGCACCTTTTGAGCctttattatttttagaaaCAGAAAAATCCCTAATC TCCCATTGGTGGTATAACTACTTTTCGTCATATTCACTAAATTTGTATGT TGATGGTCAGTTCTACTGCACATTACAATTTAGCAAATGCATGagcagaa aaaaaagaaaaaggcgGTCAATTTCTGACACCCAACTTGGTAAATGACTT ACAAGGGTGTATAGAACTGCTTCAAGAGAAATTTCAGTTGCGTACATAAA TAACATATAAAACCTTACTAAACAATCTTATTCTTTTGACAGTTCCCATG GCAACAGTACCACCAACCACTCAACCACCAATACACGAAGGATACTGTCC ACCACCCGAACCATTACATAATGGAATTATTCAAGCTGTTCGGTTCGGTA CAGAAGAAAAATACCAGGTATGTGTTGTTGAAAGGAGATCGTCNCAAGCT GTTCGGTTCGGTATAGAAGAAAAATACCAGGTATGTGTTGTTGAAAGGAG ATCGTCGGATGGTTACTTGAGAACTCTAGCCTGAATTTACAATATTCAGT AGCATAGATATCTTTTATAGAACACCGTTTGAGAACACCGTTTGAGTACC TTATTGGTCCTTTTTACGCCTTAACTTAACgtcggccccttttacgccgg cccttattacgccacgagccaaaaaaataacgccaaaaagggccgataag gtagtagagctaaaattgcttaaaGATTCTCtctgaaaaccaaaaaaata gtTCGGGTTACAAGTAGTATGTTAAAAGTCAGTTATACCTTGCAAAGGTT TCGACATAACCATGAGTCTGTTCAAATCGGACAAGCTTATGTAAAGAGAA CTCATTCATTGACCAGAAGACATGACGGACAACGCTCAACAGCCAATCAT TGATTTTTAAGAAACGATGACCGAATGATCAAGGTATAAAGTACCTCAAC AAGACTCTAACCAGAGGTTCGTGGTTCTATTCAGCTCATAGAGAATCGAA CCGGCTGACCGttgaccccgtgaaaacaatcgaaagactgtctgaAAGTC TTAGATTATCGAACTATCCACGTTATATATAAACTCTAAAGTATATTTCT CTTTCAACATTCAGGTTGGAGATCGAGTGTACTTTTTGTGTAACATCAGA TACCGGTTGATCGGACCAACTTACCGAGAATGTGGATGGCATGGGAAATG GGACCATGACAATCCTTATTGTCAAAGTGAGTTTCATTTATTGTAAGATG GAAAAATAGGTCTCACCTAAAAGACTGGTTTGGTTGATATTGTTCGATGA ACATTTAAGAAATTAAGAAAACCCTTTAATAATAAACAACTGGACATTCT GGTCCATTTAAATAAAGGTAGAGTGGATGAATTAAATTTAGTCGAATAAC TTCTACTGCAcatgtagtctgaatcgcagacctctacaaaaccccaggta gtataaggagtacgaatccgttagtggatgccagcagcctactaCGCATG GAAAAGTTCTATTGATATATGTAGGAGTGTGTAAGCAAAATTTCATTCCG AACTGAGGCGCACATACATAGATTTTACCAAATACAGACACCACTGAGGG CAAAATTACCGAAACCATGAGGTTTGCGAAATGACGGGTGTGTTCGAGCC AAAAAAACTACCATCCCCTGTAACtctatggaagcaaacgttcgatttgc gtaaagGATTGCCtttacagattcgaacgtttgcttccataatggcggaa attacgtaacttaacaaaacatgaatAACCCTCTATTgcgcttttccaga aaaaaaaatttacccccgCTGtcgaggatattgatttttcgaagtatcaa accccctggatatcctactttattggcaaagacccccctggatatccact tttgaacaaaaatcgttaaccccctggatatctgatatcctcaacagagg ggggggcacggactatttctggaaaaaccTCTATTTGGtccttttttctt atttccttTACCCCTTCTTCCTTCTTCCCCTTCTtccaacaaaaagaaaa gaaggatGAAGACACGGAGCCAGACAACGTTGCTTCCGTTTTCAACTTAG TCGAATATTGTTCCCGACTCTTTCCACCAATCGATGGTGAGGTGATGGGA TCGAATCAAGTTGGAAGTTTCATGGAGTTTCGATGTCATGATGGATACAC AATGGTTGGAGCTAACAAGACATTATGTTTGAGGAATGGACAATGGTCTA AAATAACACCAAAGTGTAAACGTGAGTGCTTCATAAATTTCCCATAATGC ACTTACACTTTTGAGATGAACTGCCTCATTTTTTTATCTAATGCAATAAC TGAAAGCAAAAATGATATCAGTATTTTGATGCAAATTATATAAGCTactc ttgtgtgcttaattgtaggtggggttattttgaaatttttggaaaaaaat caccccATATCAATTTATAATGATCCCCCGGGGGGATTTTATTACCTTTA TGCTACGAAGTGCCAAAATTGGCCAGAAACCTTCATTTTCCGAGGGATTT TTAGTAAAATCAGATCAATAGCACTtaataacccccccccccttttatcT GGAGTAcccaccccctgcttattccacccacccctacaattaagcacgcA AGTTACTTGATAATTCACTTTAAGTTTATCTCTGTTTTAGCGGCGTGTTC CGTTCACGAGTGTCCATCCAATAAAAAATGTGTCTTGGATGCAATAACAC AACGCCCAACATGTGAATGTAATCTCAAAAACAAATGTCCCAACTACCGC AGTGCTGTGTGCGCGGACGACGGACGGACATATCGAAACGAATGTCGGAT GAAATTGGCAGCGTGTACGATgaataaagatttgaaaatacTACATGATG GACCTTGTGAACCAAGTAAGAATGTATTTAAAACGTTTGGAAACGTCCAG GGTCTCCAGCAAAACGTCCAAATTCATTTCATGAAAatagatgaaaataa aaatgtcagtTGTCGACCAATGAAAAActtgttgaggaggtccatctctc tgtggctggaaatgctgtaaccccctgaaattccaggcaattttaggttT AAACCCTCTGAAATTCTGAATTtcagtaggatttaaaaagctactctcat ggaattccagttatttttgacagatctctatggaattccgccacatatca aaccttacccccttggaacagAAATGGACCTcttcaacagggggtatacg atttttttctggaaaagcccaatcatAAACCcttgtaaaataaaaaactt tttatacCTTGTATAACTCCAGTCTAAAACTTGATAAGAATTGAAATTGA GAATATATTTTAAATGTATTCCGTCGATCAACTCTAGAGTTGCTTGGGGT GAAAAGGTGTTAAGAAGGTCATTCTTAGGAGGTACTACGATagatacaag tttttttataagaacaaactatataagaacataaggttttgatggcaaaa tgttaagaacaagttaagaacattttaaggctttgcggaatcgaaaacat ccgatttcttaagaaaaatgagtaaaaatggtcacagtatgcggtgaaaa taagaacattgtcagataaaactgaaagaataagaacatctgaaggctta tTCAAAAATGTtagttgttcttataagaaaacgttCATCTATTGGTCACC ATTATAAGTTAACAATGCCAGAGTTTACCATATTCTTATCACATTTCAGT ACCTTCATGTCACATCCAGCCCAACAAGCAGTGTACAAAACAACTAAAGA AACCTGTATATCGTTACAATGAAGAGAAAGGAATATGTGAACAAACTACA CAATCAACTTGCCATAAAACAGGTTTCAATGGTTATTGGAAGAAACAAGA TTGTGAATATTATTGTGGGAAAAGTAAGAGTTTACAAATTTTCACAAAGC ATTTGGTTTAACGGACACTTTCAAGTTTGTCTAATTGTCTTTAATTTATT GAATTTCGTGTAATTTGTAGAAATTtaattactcttgtctcccgaataga cgatgggggggggtccgaataagcaggggggtaggaaaattttctaaatt ctaataagagggggtaatttgaagacagaattttttttgactgatatcaa tttcaacaacaaaaaagaaactttaacaaatgaacacgtaaaataataAC CAATTCTAAcataaaggaaaattttaacaagtttaaggtttaTCTACACT ATaatgaaatattgaattattcgaatttaattagcggggtggggtcttaa taagagtgggggatagatttttttctcttaacaattagcggggggacgtc tattcgcgAGACAAGTGTAAAGACGTTTAAAtaatataccgttggaaaga tgaTTTTATGTAGATTAAGATAATCAATGAAGTAACCGTAGCATAAGGAA AGAGCATTGAACAAGAGTGCACAAGATAGGCCAAATAGTATACTTGATAA ATTGTATTTGATAGCTTTCTGGTTACTATCAAGCAACTAGAAGAAAGGGT GAAGGCTCAATAGCGGGAAATCCAGTCTTTCACAACTTTTAGGTGaaaag ctaaagaaaaaagAGCAGTCGATGTCAATTACtcatttattattttcttg CTTCCTTTAAGCTGGTGTTTGCACTTTGGACAAAGACAAAGGACCTTGTA GAAACGCTCGACCAATGATGAGGTGGCATTATGTCCCCAAATTCAAAACC TGTAGAAGGTTTATTTACTTTGGTTGCTATGGTAATGCAAACAATTTTGC AACTGGTCACGAATGTTTTACTTTTTGCACCGATAaccaagtcaaaaaga agagaaaatcgCTGGCGTGAGATGCATATGAAGTGCAATTTTAAAACCCT GTCGAAAACTTTCTACCCTTGAACCTATgttaaagtgaaattttgtaTAT TAGTTTGAAATAGTTTGTGAATAATATTATAAAATACCTTTTTTGAGCGC ATGTATCGATTTGAACAGTATTTTTAAAACGAGAAGTATTTAATGTCTGT ATAGCCGATTGGATTtaaaatgaagataaaattAAACGCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054268TCONS_00054268Clytia hemisphaericatranscript
TCONS_00054269TCONS_00054269Clytia hemisphaericatranscript
TCONS_00054270TCONS_00054270Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054268-proteinTCONS_00054268-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:1526556..1537595 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.08 0.21 0.11 0.08 0.14 0.36 0.37 0.4 0.82 0.47 0.71 1.04 7.83 7.13 1.41 2.07 3.4 3.05 30.45 31.48 1.53 1.37 0.6 0.37 1.31 1.61 0.62 0.4 0.36 0.2