XLOC_036375 (gene) - C. hemisphaerica

Overview
NameXLOC_036375
Unique NameXLOC_036375
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_297:121608..126783-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036375 ID=XLOC_036375|Name=XLOC_036375|organism=Clytia hemisphaerica|type=gene|length=5176bp|location=Sequence derived from alignment at scaffold_297:121608..126783- (Clytia hemisphaerica)
TCAGCTTATCAACAGCAAGTTTGTAAGTTCAAAAGATTTTACTGTTCAAT TTTATTTTAAATCGTTATTTTGAGTTTAAGATATTGACTAAGTCCCATGT GTACTTTTTATCAAATCAGCCAAGCTATTGGTTGTTTACCAGGGTAGGCC ATTTTGGGAAAGATTTATGGGAAAAGCTGCATTTGCAAAAAATAAATTAA TCAACCCTCTCAAAAGAATATTTTATAGAAACGATTTGATTTTCGAAACA TTTATATTTCATTTAGCTACAATTTGAGGAAGATGCGATGGAATTTGTTG GAACATTGAAAGGAGCCAAGGGAGAGCAAGGCATTATGGGATTGAAAGGC GAGGAAGGAAAACAAGGACCTCAAGGAGAACAGGTAAGTTATATAGAATC TCTGTTTAGTTTGTCTATTATCATTTTTATCAAGAGTTCGCGAATAGAGC CTTTGGTTTGGGTTATAACCACTATAGCCAACTTAGTGAGGTTAACTCTC GCCCAAGTGAAGGTCCGGCAACATTATCACTTTAGAAGTTCAAGAAAGTA TTTCTCAAAAAGTTAAAATCGCCCATGGGTGTTTTGGTCGATGCAGGCTA CTTTAGATACTTACCACCTACCTGAATCGTTGGGTTTTTCCTTCAATATG TGGATATATATATATTTCTTCATTTTCTTCAGGGAATACAAGGTATCCAA GGGGAAAAAGGTGAAAGAGGTGCTAGAGGAGAAAAGGTAGAGAAATATAT CTTACTCGTTTATGACAAAGGAGGATTTGCTTTCAAGCAATTTAANATAT TTCTTCATTTTCTTCAGGGAATACAAGGTATCCAAGGAGAAAAAGGTGAA AGAGGTGCTAGAGGAGAAAAGGTAGAGAAATATATCTTACTCGTTTATGA CAAAGGAGGATTTGCTTTCAAGCAATTTAAAATCACTAATCTTAATACCA CGCATGCAGCTGTCTAGAAGAAGCCATTTCACACGCGATTTCAATTAATA TTTAAGGCCTACATAATAATTTGGGCCTTATCTAAAACACTATAATTGTC TTAAAACAAACATCATTTTTCACGTTATTGATTAGCAAACTCCATTTCCT GATTAGGGTGAACAAGGAATCGGTGAAGTTGGACCAAAAGGTGAAAAAGG GGACAGTCTGAAAATATCAGAAGTTGCTCAAGAGGTTATTGGTTTGGCAG AAAGACGTAAGTTTATTTTTCTCCAATACTTAGAGGGGTTCTGATAAATT CCGATGGTGGATTGGCGGATTGGCGGCCGCCCACGCTAAAGCTCTAAAAG GAGCGGGCCAATTTCCCATCGGAGAGGAATGATAGTCGGCCTTTGATGTA CTGCATTCCCAGTCAGGTTCAGCCACCCTTGTGCGTAAGGCTGAAAATAT TTAGGTTAGACCCGTTAATCCCCGAAAACATCGGCTGGGGTCGAAGACTC CCGCTGCAAAATCCCTGACGCAGTCTTGCAAAATTCCGTAATCCAAACCT TCCACATATTGAAAATTTCCCGACCTTCAGAGTTTTAGCGAGTGCAGATT CCCAGCTAGCACACAACGTTATTTCAATGTTTTTCCGTATAACGTTAGAC GGATGTTGAGACAACGTTGCGTGCCTGCAGGTTTTCCCTTCCCACTACCT TCCTCCTGAACAGATTAACTTACTAGCTTGTAATTGAGGTTTTTGTATTT ATCACAGAAATTCGAAAATTGAAGGGCGATCAAGGACCTCCAGGTGATCA AGGGCCACGTGGTCTTCCTGGTGTTTCAGGGCCGCGAGGACCCAAAGGAG AAGCTGGAGTTTCTACAGGAAGTAAAGTAAGTAGAAATATGTCATCAAAA ATATACTTTCTAAATAAAATATTCGCTTCCCGTTGTATTGAAAACTATTT TCAAAATTGCTCCCGATAACGTCGTTATAATTTGTAAATGGCTATTAGAG CTTTTTATCCGATAAGCGATGTCGGATATATCCTCTTAATCGATGCATCT AGGTAGACAGAACGATACCCAAATTCGTTAAAACGCTGATTTCAGAAGCA CTATCAAAGTTTTTCCCAACTCCTATTCTTTTTAATATAATTACAATGAC AAATTGTTGTTTTCTGTAGGCGAATGTGATATTAACGGATCAAGATTTGG ATATAATGGAAGATATGTTCGGCGTTGGTTCTCTTGCATTTGTTATCAGT ACAAATAATTTGTTCATCAAATCTCTCAAAGGTTGGATCAGCATCCCCGT AAGTTCTTTGGTTTTGATTGAGATATATTCATTCTCACCAGTTTTTTGTG AGACTTATCTCATTTATTTTATCCCAAGTCTGCCCTTTAGATTCTTATAC ACTTTATACAAGCTTGAATATTTCCATAATACCTGTGAGCCATGTAAGCC ATGCATTTTTTGAGATCTAAACCCTCAAATATCTTTTTCAACCTTAAGTA AATGTAAAACTTAAAACTTTACTTGTAATTTTATCCCATTTCTATCACCA TAGACCGAATCGAAATCAGGTCTTCTTGGCAAACTGACCACGGATAGCAA CGAGATTGCATCAGGTCCAACCGTGATCGAATTGACCAAGAAACAAATCA CCGAACCCACTGATGTTGTAAGTGGTGGCTCTTCTTTCCTTGGCAATTTC TTTTGCTACTTTTATTCGTATTGAGTCACGACAGTAGAAATCAATCAATC AATTGTAAACATGATTCAAAGAAATCGATTTTTTAATTAAAGTTTTGCCA CATAAAATACTAAGGAGGCCCTAAACTAAAAATTGCATCGTAGACCAAAT TCATAGAAATTTCGAATAAAGTTTCTCCAATTGGACTATAGAGTTTCACT GGATTGTAAATTTTCGTCTTGTATCATCATAGGATAAGAAGTTGATCAAA GAAACCTTGATTGTTCCACAGCNTGTTCTGTATCATCATAGGATAAGAAG TTGATCAAAGAAACCTTGATTGTTCCACAGCCTGGGATTATGGCAAAAAG ACCTTACGTAAGTTAACTTTTGCAAAAAAAATATTTCTTTTTTTTGAAAA TCAAAACATATCACTACAGGCGGCTTGTATTGTCCTTGTCGTTGATTGAT GTTTGACCCTGCCTTCATTTCGAACAATCTTTTCGACAGAAATTTCCAAT CTTTCCACTTGCATCAACCGCTATTCAACCGACACCTCTGAATTAAGAAA TGACTTAAAAAATCTTCCCTTTTCAGTTGATGTTAATCGCTTTGAACGAG CCTTATTCTGGACGAATGGGAGGTTTAGCAAAGATTGATAAAATGTGTTC AACACAAGCCAAAGCAGCTGGATATTTCGGATTGAAATTCCACACCTTGA TCTCAGACAACTATAATGATATCGCAAATATGATTCCTTTCCGAAGTCGT AAAAAACCAGTCGCTAATACCAGGGTATGTACCGGAGATTCCAGTTAACT TTACGTTGTGCTGTTTAAGAATCAATGATAATTGTATTATAATATAAGAT CTTCTTTTCTTGATATTTCTATTTCTCCACAAACCGATCTTCTCTCTAAT CAGACAATCTCTTTCAAATGAATTATTATTATTCACCTTAGCTAGTTTTT TTTCATTCTTGGTTTCGACCTCCAATGTCATTTGAACATCTACCTAGCCT GGAAGCCGACTTCCTGACCAGGGATATATTCAAATGATTCGAGGTTTAAG AACCTTCACGAAGAAGGAAAATACTTACTATCTTACTATCTTCTTACAGG GTGAGCAGATCTTCCCACGTGCAGAAGATATCTACAAGAGTGATAATTAC ACTGCATTTAATCCAAACATCCCAATCTATTCTTTCGACCAAAAAGATGT TCGCCGACATGCTTCGTGGTAAGATTAAGATGTTTCTTTTTTGTTAAAAA GATACAGAAAATAGGTTCTAATGACAAGATCCCGAAAAAATAGAACAGTC TTAAAAATCACAAAACTATAGAATCACTTTCCAATCTCGTCCCCGTGTAT CCCAGGCTTTATTTACGTTACTTATGGACGTCATAGAGAATATTTAGCGC CATATAGTTGAAGCATAAAAAAGCTGATAATACCAGGGAACGAGGTTGAT CACGTCCTTCAATCAAAGTGCTGATTGTGGTGATTGACGTGATGAAAGCC TTTCGCTAGCGCTATCAGACTCTTAGCGAACTAAGAGACTCTACAACCGA GAATTAAGTTTGACCTCCCTATCTCTCTCTATTTATGACTTGGCTCCCAA AAATATAAAAGCTTCTTTTTCCTTCCAAGACCTTGAATAAGGTGCAATAT AGTCAGTCACCTCATTGAAAAAAATACTAATGTAAAGGAGGTCTTCTCCT CCTCTCGATAACATTCTGTTATACAATTGATTTTTCACTCAAACTGGACC TCTCTCGAATTCTAATGAAATGCACTGTATAACACTTCTACTTGAACTTA TTTTGTAGGCCGGTGAAGAAATTTTGGCACGGTTCACACGCTAACGGAAA ACTCCACTCAACGAAAATGAATTGTCGCAACTGGCGTTCTGAGCAACCTT TCCATAAGGCAACCGCATCTTCCATTCTTACCTACACTCCTGCATTGAAT GAGTTAGACGTACGCTGCGACCAAAAACTCATCGTCTTGTGCTTACAAGT AAGATGAGGTCAAGTCCCAGGTTAGATGACATCAATTCTCTATAAAGGGA ATCTAGTTGGGAATTTCGATGACGAGAAACACCACGGTATGAGAGAAAAG CGTGGGCGATGAAATTCTATATATACCTACCTGTCTTTAATGTATAAAAC GTGACCTTGAATAAGATAGTGGTAAAAAATTGGGTCTTACACATCACTAC ACTACAAAATGATAATTTATAATAAGCAATATTTTTTAGATAGTTTTATA GCAGATAGAGCTTTTGTTGAAAATTTTATTCTAAATAATTTTATCATTGT CTTTGGCCTAATTTTTGGTTAAAAAATTCAGAACCAATCGAGAACTAGTT TGAGTCCAAAATCGAACATTTTCAGGACCAAAGAGAATCTATGGATTAGA CTTTTTGTTATTTATATTTTATTTTCTCCTTGTGTACATATTTAATTATT TTTTTCAAAATAAAATAGTTTTTGGAAATAAAAAAATTATTTTCAAAAAA AGTAAGAAAGAAATTTAGAAATCTAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057691TCONS_00057691Clytia hemisphaericatranscript
TCONS_00057690TCONS_00057690Clytia hemisphaericatranscript
TCONS_00057689TCONS_00057689Clytia hemisphaericatranscript
TCONS_00057688TCONS_00057688Clytia hemisphaericatranscript
TCONS_00057687TCONS_00057687Clytia hemisphaericatranscript
TCONS_00057686TCONS_00057686Clytia hemisphaericatranscript
TCONS_00057685TCONS_00057685Clytia hemisphaericatranscript
TCONS_00057684TCONS_00057684Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057688-proteinTCONS_00057688-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_297supercontigscaffold_297:121608..126783 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.47 5.52 2.15 1.35 22.48 16.53 92.19 110.24 23.01 36.71 18.16 6.7 18.13 15.3 5.48 3.34 21.32 24.95 30.79 20.08 31.02 29.66 21.26 16.84 45.15 47.29 105.83 106.84 18.98 23.85