XLOC_038363 (gene) - C. hemisphaerica

Overview
NameXLOC_038363
Unique NameXLOC_038363
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_354:123428..130263-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038363 ID=XLOC_038363|Name=XLOC_038363|organism=Clytia hemisphaerica|type=gene|length=6836bp|location=Sequence derived from alignment at scaffold_354:123428..130263- (Clytia hemisphaerica)
GAAGAATTGAAGATGAAGATTTGGAAGGCTTTGTTACTCCTCACTTTCTT AGTGTACACTGTTTACTGTGAGTTTTTTTTAAGGATTTTTTATAGTAGGG GAAGGGGCCATATGATTTGCAGCATATTTTGTGGGATTCAACTGCATGTG ATTGTTTCCGAAAAAGCTAGGAGTTTGATACTTTCTTGAGAGGGGGCCCG CGAATTAGACCTGGCAAATGGTTTTTATGGCCGATTTTGTATACCAATCA GAATGAGTTATAAATTGACGATTTCTAAAAGTCGAATTCAGCAAAATTGA TTGTCATCATCACATGAAGCATGAAATTCTGAGCAAAAAAATATACTACA GTGTCTCATTCTCAAACACACAAAAAATATAACCATTCAAAGTTCCAACA CTCCACTCTCAAAATAGAAGACGTTCAGGACGTTACAAAGCAAAACGAAT TGAAACAGTCATAGTCACACTCCACTTTTTTCATCGGAACGGAACTGCTC TTTTTTCTTGCTTAGAAACGTTTCGAAATCAATACGAACAGTTTCTATCC GTAACAAAAGCTAAACCGAAGCGATGCTATACCGTCACGTCTAAACATGG CCTGATACTCAGAATCTCAGAGGTGTCTAAAATTCTCATTTAAAGCCGGT CTCCACTTGCGCGCGCTTCAATCGCACTTTTCGAGAAAAGCTTCCACACT ATTGGTCAAAAGAAAAATGAAGCAAGTCCATTGGCGCGATCTGACGTAAC GGTTGAAAAAAGTTGAAATGTGTTCAACTTTTTTTTNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNCACTTTTGTGACAATCTTCAGGCAACTAAAAACATTTTTTCA AACATTTTCACAAAAGTGGCATGAAACTGCCAGTAGCAGAATAAAAAAGT GTCTTTTCGTTCTGACTGACATTCTCGCTCTACTTATGTATCGAGCACTG TAAAAGACTGAAGAATTACTTACATGAAATATTTTACATAACTTTTTTAT AGAGGCTGTAGAGGCTATAGAGGCTCCTATTTCAGGAGGTTGGGTACAAG AAAGAGGATCGTGCAGATTGAGGAGAATAAGAAGGACTTGCCGTACTTTG AGAAGGTTATGTAAAAGACTTGGTAAGTTATCCCAGCTGCCAAACAACGT ATTTTCGACGTTTATCTAACGCTCACAACCACAACGTCCATATAACGTTA GATGAACGTCGAAACAACGTTCTGTGCCAGCTGGGATACTATATCACACC TCTGACTCACAGTTCTGTCTCATCACGGCCCCGATATAACTCTTTTCCCA TGTAGTTCATGCTAGCTGTCTGATAACCGATAATTCATATTTTTCGCGTC TAAAGTATATCTGTCTAACAACCAATACTTTAACAAAAACTTTCGTGATT TTCACAAATGTTGGCCTTTTCCGCAAAAGTAAATTTCTTCGAAAATTCTT AACAGAACAATTCGCGAAAGTTTATGCTCGTGAAAAATTCTTTAAAACCT CGAAATCGTAATAAATATCAAATTTTGGCATAATTTTATCCTTTAATACA TTTTTAAAGTCGAAGAGCAACCATATTTATCGGACTTAAGGAATATTTTT CACTCATAAGGCAATTTTCAGTCGAAAATTNATCCTTTAATACATTTTTA AAGTCGAACAGCAACCATATTTATCGGACTTAAGGAATATTTTTCACCCA TTTTTATCCAACGATTCGCAAAAGTTTATGCTCTCGAAAAATATTTTTTC CTCAAATTTCGCGATTTTTCGACCTCACGAAAGTTTCTGCTCGCAAAAGT TTGTACACCTAAAGTATATTTTTTTGCAAAGTTCTAAAAAAATTTGTGAA TATTAAACAGTTAAGGTTTTTTATGTTTCTTTATTTTAACATTGGAAGTT ATAGACACAGTAGTCTAGCGAGCTAGACGACTAATTCAAACATAGTAGAA ATAAAGCAAAAAATACTGGAGGGAACAATTTTAATCGTCTAGAAACCTTT GTGCACTAACTCAAAACAAAAGAAAATTGTCAATTTGCAATTATAATCTT GCTTAAAAAAGATTCTTAACGAAAAGAAATGTGCATTGATTTGTGTGTTA AAATTTTTTCATTTGAGTTGATTTTGTTTTAAGAGTTTGTTGTTGCTTTG ATAAATCGTTTTCTCGCTACGCAAGTTTCTGCGTAGCGAGCCGGAGATTC TAAAGGCCGGAACACCGGATTCTTCAAGTAGTTTATACAAACTAAATCCC GTAACAATAATCGTGATATCATATAACGCCTATACTACTGTATTACACGC ATTATAAACGACCCCAGTCTATAAACACAGACCCTTTGATGATTTTTATC TTTATTTCAAAGGGTTCGGAAGAAGATGTATTCTTCGACAAATCTTCAGA AGATGTAAGTATGTTTTTCGAAACCGTTGCAATTTCTGTCGACGTGGTAG ACACGGAAGAAGATGTCAACCTCAATATTCTGGTGGACTAATCCAAAATT ATGAGGTTGAAAGTTCATATGAAGTCGTACCCATCTCCGCTTGATGATGA GGACAATGGTTGAAATTTCTTTAGTCAAAACAAACATCTTGAACAAACCT ACTTTTATTTTTTTTAACATTTTAGTAAATAATTTCAACTTACCTAGACA AACAACATCAAACCAAATCCAACAACATCATTTTTCACCTGCGAAAGGGG GTACTACCCTTGTCGACCGACGGGGGTGTGCCGCTGAATTTTTTAAGTAG CCGTGAATGGGGCTGAAATTCCAAAATATTCTCAAAATGTCCTACTTTTT TCCAAATTCCTCCAAAAACGTACCCTACGAGGGGTTGATTTTTTTATTTT GGTGTTTTCGCGACCCTACCTGGGANACATTTTTATGACGTAATCTTTTT TCCAAGCAAAAAGGATTGAAGCCAAAAAGTGCGATTGCAGCGCGCGCAAG TGGAGACCGGCCTTTATAGAGTTATTCTGCAGTTAAGATTATAGCCTGTA AACCTGTTCTCTTATCTTTGAAGGTGAAGAAACTGAAGAGATTGAAAACA GCTTGGAAGATGTTGCTGACATTGAAGAAACACCTGCTTTAACATCGAAT GACGAAGAAACAAATGACGAAGATGAAGCGGCTGAAACAAAACAAATTTT ATCCAAAGGTACGAGATCACAAACTATAGAAAGAAGATAGGCCTCGACCC ATTAATTGAAATATCGTGCAACTTATTCGAATATTTTCATAAAAGTTTGA CTTCCAGTCCGATGTATTAGTTCTTTCATGCGGGGAGAGGGTCCATTATA CCATAGTCTGTATAGAAAACTCTGGTCTGGAAGCCTATTGTTCTTTTCTA TTGTTCTCCTTCCAATGTTCCGTTCAGTTCATAGATAGTGAAGCCGGCTG GCAGTGGACCTCGTGAAAACAATTGAAAGAATGTCTAAAAGTCCTAGATT ACTGGGCTATCCACGTAAAATATCGACTCTATCTAGCAAAACATCAGACG GGAAAAAAAGTTTTGAACGAAAAATGGCTACTTGAAATATTTTTCAACTT CCTGAACGAAGATTGCTCTGAAATTCTAGATTAAGACATTCTTGATGAAC GGACTATGAGTATACAAACCCTACTGTACTGTCTATTCTAGTTTTCACAG CCGATCATATAAAATTTGACTTCTTTTGTGCGGGGAGAGGGCTCACTATA CAAACCCGACTATGCTGTTTTTTTTTAGTTTTCACAGCCGATCATATCTT GAACGGATTAAGATCGCTTTCAATCTACTACCTTAAATATCAATATAATA CAGTGGAGTCTCTTTAACTCGAACCTCTATAACTCGAATGTCTCGAACAA GTTTTCTAGTCTCCTTATAAACGTTACTCCATATCTTGAAATTTCTTTAA CTCGAGCAGATTTGTATTCCCGTTGCGTGTTTGAAACTCCAACGCTACAT TTTAATTTCCTGAACCTCGATTACTACACCTCCATCTCACTTCTCACAGA CCTGGTAGGATTTTCTCAGCCAGTGCCGATGAAAATAACGGTCTGAAACT CGATGGTGATTGATATTTCCTCATTTTTTATGGCTGGGGATTTGAATTCC ATTGTTTTCAAGGCAGAAAATTCAGTGGTGATGGGAAAAATTGCATACAT TTATTTGATTATTTTTGGTGGGGGCAATAATTGAAGCATAATTTTTCTAC CGGGGACGATATTTCGGTCAATTTTTTAAGTGGATAGGTGAGAAGGGGGT GTATTACTTAACGAAATTAACCATACACACAGTGAAGATCCTCCAACCAG AGTGTACTAGACGTTATTAAATTATGAAATATTATACAGTAAGAAAGAAA AGACACTTTCTTTTATTCTGCTACCGGCAGTTTCATGCCACTTTTGTGAC AATCTTCAGGCAACTAAAAACATTTTTTCAAACATTTTCACAAAAGTGGC ATGAAACTGCCAGTAGCAGAATAAAAAAGTGTCTTTTCGTTCTGACTGAC ATTCTCGCTCTACTTATGTATCGAGCACTGTAAAAGACTGAAGAATTACT TACATGAAATATTTTACATAACTTTTTTATAGAGGCTGTAGAGGCTATAG AGGCTCCTATTTCAGGAGGTTGGGTACAAGAAAGAGGATCGTGCAGATTG AGGAGAATAAGAAGGACTTGCCGTACTTTGAGAAGGTTATGTAAAAGACT TGGTAAGTTATCCCAGCTGCCAAACAACGTATTTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061150TCONS_00061150Clytia hemisphaericatranscript
TCONS_00061149TCONS_00061149Clytia hemisphaericatranscript
TCONS_00061148TCONS_00061148Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061148-proteinTCONS_00061148-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:123428..130263 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.83 5.97 5.03 4.7 0.77 2.54 2.36 2.96 0.52 0.73 1.4 1.16 3.14 11.74 4.29 0.58 4.93 7.44 0.77 0.27 0.78 0.94 6.33 4.88 0.77 0.46 0.67 0.51 3.01 2.89