TCONS_00054417-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054417-protein
Unique NameTCONS_00054417-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length171

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054417-protein ID=TCONS_00054417-protein|Name=TCONS_00054417-protein|organism=Clytia hemisphaerica|type=polypeptide|length=171bp
MNIKMIQSSRQLIRSQCWIRFFHHRNLPKDGVFKLWNYTGQNSGYFWMFP
IRQRQSALSSRSFYSNFCSTRNICSSATLLEEKQPIGKIEGTLYLEFTCN
VCEHRSSKTLSKQAYQSGVVLIRCEGCQNLHLIADNLGWFRDNKVNIEDL
MKEKGEEVKQLSVDDLQFVPK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034298XLOC_034298Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054417TCONS_00054417Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007853Znf_DNL-typ
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007853Zinc finger, DNL-typePFAMPF05180zf-DNLcoord: 95..157
e-value: 5.0E-32
score: 109.5
IPR007853Zinc finger, DNL-typePROSITEPS51501ZF_DNLcoord: 88..171
score: 17.874

Blast
[Close]
BLAST of TCONS_00054417-protein vs. Swiss-Prot (Human)
Match: DNLZ (DNL-type zinc finger protein OS=Homo sapiens GN=DNLZ PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.856e-23
Identity = 43/88 (48.86%), Postives = 61/88 (69.32%), Query Frame = 0 
Query:   86 IGKIEGTLY-LEFTCNVCEHRSSKTLSKQAYQSGVVLIRCEGCQNLHLIADNLGWFRD--NKVNIEDLMKEKGEEVKQLSVDD-LQFV 169
            +G++E   Y L +TC VC  RSSK +SK AY  GVV++ C GCQN H+IADNLGWF D   K NIE+++  +GE+V +++ +  L+ V
Sbjct:   61 LGRVEAAHYQLVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNLGWFSDLNGKRNIEEILTARGEQVHRVAGEGALELV 148
The following BLAST results are available for this feature:
BLAST of TCONS_00054417-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DNLZ3.856e-2348.86DNL-type zinc finger protein OS=Homo sapiens GN=DN... [more]
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