TCONS_00067589-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067589-protein
Unique NameTCONS_00067589-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1310

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067589-protein ID=TCONS_00067589-protein|Name=TCONS_00067589-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1310bp
MSNECDTNIRSDDLINYNNNRSDEQTEAVTPVCIEDHIQPIEEANQNDGK
SRAVKVAESSNTDKIEVKRQPVVSVRQLFRYASTNDWIFMFLASISACIN
GMLQPISFILFGELIDDFVEQDAGKTIDLNKEMEKFGIYYVYIGLGAIVF
GYFQNMLWLRASINQAFKIRTLAFESILRQDIGFFDTNDAGELTSRLADG
VTKIQSGIGDKIGSLQHAIAMLIGGTIIGFIYGWKLTLVIIAMSPLLFIG
AFATGKVIGTITSQEQTSYAKAGSIAEEVLSSIRTVVAFGSEKKETDRYC
VHLKDAERAGIRKGLSTGFAFALFNLTTFGCMALGFWYGGTLISESEMTA
GNLLIVFFSILMGASQFGQVSPNMEVFSSARGAAYPIYQLIERQPEIDSL
SESGEMIKIEGDIRFQDCHFAYPSRPNVQVLRGFNLRIKPGTTCALVGES
GCGKSTTVKLIQRFYDVARGDVQIDSVGIKSINVKHLRRHIGVVSQEPVL
FDASIKKNILMGHPEASEEMVIQAAKNANAHGFITELPQGYDTNVGEGGA
QLSGGQKQRIAIARALVRDPKILLLDEATSALDTGSEAIVQGALDKASFG
RTTIIIAHRLSTVKNADQIAVVSNGQVCELGSHKELIDKRGEYFKMVTLQ
NLAAQKEDSNEPSSVLGDFTDIDEELLKESAFHEKSKHDTLQNVESTTSA
KRQTSNKLQPQSSQTRQDEKETPDESVKTPPLGRILKLNANEWPYILLGV
FFSAIAGAMPVVAAIIMAEILQSFAEVDANEMKKKMEFWSIMFMVLGLVI
AIAFFIAQYLFSKAGEALTTRLREMAFTALLRQEIGFFDLPQHNTGALSA
RLSADAAAVQGATSTRLNTLTQVVVSGLSSLIVAFAYSWQLTLLVLAFVP
FIAMFGGIQTSLNTSFAGNAQETLSQAGAISTEAIMQIRTVASLGKEDYF
IEKYKSLLSGPTQGSLKSAHIYGLAYGFSTGVMMFSDGACFRLGGYLAEK
DGLPLSAIMKVIIGIQFGAMTAGQTASYAPDYVKAKTAAGRILALFDREP
VIDSYSSEGMKNVIKGDITFKDVEFAYPTRENVEVLQKLNLTIPCGRTVA
FVGASGCGKSTSVSLLERFYDVTGGKVLIDDILIKDYNIRSLRSQIGIVQ
QEPVLFDRSIRDNILYGIEDTSQITKETIETACTNSNIHHVIMGLPNGYE
THVGDKGTLISGGQKQRIAIARALIRNPKILLLDEATSALDSESEKVVQE
ALDRAMEGRTSIVIAHRLSTIQNADVIAVIQNGKIMEIGSHFELMALKGA
YYSLSQNTQL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042204XLOC_042204Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067589TCONS_00067589Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003439ABC_transporter-like
IPR011527ABC1_TM_dom
IPR017871ABC_transporter_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
GO:0042626ATPase activity, coupled to transmembrane movement of substances
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
biological_process GO:0006810 transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016887 ATPase activity
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 440..612
e-value: 1.4E-15
score: 67.7
coord: 1095..1270
e-value: 5.9E-14
score: 62.4
NoneNo IPR availableGENE3D1.20.1560.10coord: 726..1058
e-value: 2.0E-62
score: 210.6
coord: 71..403
e-value: 1.4E-79
score: 266.9
NoneNo IPR availableGENE3D3.40.50.300coord: 410..647
e-value: 8.9E-75
score: 250.8
coord: 1065..1305
e-value: 6.6E-73
score: 244.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 683..731
NoneNo IPR availableCDDcd03249ABC_MTABC3_MDL1_MDL2coord: 413..650
e-value: 2.1209E-135
score: 415.015
NoneNo IPR availableCDDcd03249ABC_MTABC3_MDL1_MDL2coord: 1068..1304
e-value: 1.98576E-138
score: 423.104
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 1086..1238
e-value: 1.6E-31
score: 109.6
coord: 432..580
e-value: 8.4E-35
score: 120.2
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 413..649
score: 25.364
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 1068..1307
score: 23.416
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 747..1020
e-value: 2.4E-52
score: 178.2
coord: 90..364
e-value: 1.3E-73
score: 247.9
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 747..1034
score: 42.591
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 91..379
score: 52.64
IPR011527ABC transporter type 1, transmembrane domainSUPERFAMILY90123ABC transporter transmembrane regioncoord: 76..396
IPR011527ABC transporter type 1, transmembrane domainSUPERFAMILY90123ABC transporter transmembrane regioncoord: 728..1050
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 1210..1224
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 552..566
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 406..650
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1062..1306

Blast
BLAST of TCONS_00067589-protein vs. Swiss-Prot (Human)
Match: MDR1 (Multidrug resistance protein 1 OS=Homo sapiens GN=ABCB1 PE=1 SV=3)

HSP 1 Score: 1169.07 bits (3023), Expect = 0.000e+0
Identity = 605/1259 (48.05%), Postives = 834/1259 (66.24%), Query Frame = 0
Query:   71 PVVSVRQLFRYASTNDWIFMFLASISACINGMLQPISFILFGELIDDFVE-----------------QDAGKTIDLNKEMEKFGIYYVYIGLGAIVFGYFQNMLWLRASINQAFKIRTLAFESILRQDIGFFDTNDAGELTSRLADGVTKIQSGIGDKIGSLQHAIAMLIGGTIIGFIYGWKLTLVIIAMSPLLFIGAFATGKVIGTITSQEQTSYAKAGSIAEEVLSSIRTVVAFGSEKKETDRYCVHLKDAERAGIRKGLSTGFAFALFNLTTFGCMALGFWYGGTLISESEMTAGNLLIVFFSILMGASQFGQVSPNMEVFSSARGAAYPIYQLIERQPEIDSLSESGEMI-KIEGDIRFQDCHFAYPSRPNVQVLRGFNLRIKPGTTCALVGESGCGKSTTVKLIQRFYDVARGDVQIDSVGIKSINVKHLRRHIGVVSQEPVLFDASIKKNILMGHPEASEEMVIQAAKNANAHGFITELPQGYDTNVGEGGAQLSGGQKQRIAIARALVRDPKILLLDEATSALDTGSEAIVQGALDKASFGRTTIIIAHRLSTVKNADQIAVVSNGQVCELGSHKELIDKRGEYFKMVTLQNLAAQKEDSNEPSSVLGDFTDIDEELLKESAFHEKSKHDTLQ----NVESTTSAKRQTSNKLQPQSSQTRQ-DEKETPDESVKTPPLGRILKLNANEWPYILLGVFFSAIAGAMPVVAAIIMAEILQSFAEVDANEMKKK-MEFWSIMFMVLGLVIAIAFFIAQYLFSKAGEALTTRLREMAFTALLRQEIGFFDLPQHNTGALSARLSADAAAVQGATSTRLNTLTQVVVSGLSSLIVAFAYSWQLTLLVLAFVPFIAMFGGIQTSLNTSFAGNAQETLSQAGAISTEAIMQIRTVASLGKEDYFIEKYKSLLSGPTQGSLKSAHIYGLAYGFSTGVMMFSDGACFRLGGYLAEKDGLPLSAIMKVIIGIQFGAMTAGQTASYAPDYVKAKTAAGRILALFDREPVIDSYSSEG-MKNVIKGDITFKDVEFAYPTRENVEVLQKLNLTIPCGRTVAFVGASGCGKSTSVSLLERFYDVTGGKVLIDDILIKDYNIRSLRSQIGIVQQEPVLFDRSIRDNILYGIEDTSQITKETIETACTNSNIHHVIMGLPNGYETHVGDKGTLISGGQKQRIAIARALIRNPKILLLDEATSALDSESEKVVQEALDRAMEGRTSIVIAHRLSTIQNADVIAVIQNGKIMEIGSHFELMALKGAYYSL 1304
            P VSV  +FRY++  D ++M + +++A I+G   P+  ++FGE+ D F                    D G  ++L ++M ++  YY  IG G +V  Y Q   W  A+  Q  KIR   F +I+RQ+IG+FD +D GEL +RL D V+KI  GIGDKIG    ++A    G I+GF  GWKLTLVI+A+SP+L + A    K++ + T +E  +YAKAG++AEEVL++IRTV+AFG +KKE +RY  +L++A+R GI+K ++   +     L  +   AL FWYG TL+   E + G +L VFFS+L+GA   GQ SP++E F++ARGAAY I+++I+ +P IDS S+SG     I+G++ F++ HF+YPSR  V++L+G NL+++ G T ALVG SGCGKSTTV+L+QR YD   G V +D   I++INV+ LR  IGVVSQEPVLF  +I +NI  G    + + + +A K ANA+ FI +LP  +DT VGE GAQLSGGQKQRIAIARALVR+PKILLLDEATSALDT SEA+VQ ALDKA  GRTTI+IAHRLSTV+NAD IA   +G + E G+H EL+ ++G YFK+VT+Q    + E                   L+ +A   KS+ D L+    +  S+   KR T   ++   +Q R+   KE  DES+      RI+KLN  EWPY ++GVF + I G +    AII ++I+  F  +D  E K++    +S++F+ LG++  I FF+  + F KAGE LT RLR M F ++LRQ++ +FD P++ TGAL+ RL+ DAA V+GA  +RL  +TQ + +  + +I++F Y WQLTLL+LA VP IA+ G ++  + +  A   ++ L  +G I+TEAI   RTV SL +E  F   Y   L  P + SL+ AHI+G+ + F+  +M FS   CFR G YL     +    ++ V   + FGAM  GQ +S+APDY KAK +A  I+ + ++ P+IDSYS+EG M N ++G++TF +V F YPTR ++ VLQ L+L +  G+T+A VG+SGCGKST V LLERFYD   GKVL+D   IK  N++ LR+ +GIV QEP+LFD SI +NI YG +++  +++E I  A   +NIH  I  LPN Y T VGDKGT +SGGQKQRIAIARAL+R P ILLLDEATSALD+ESEKVVQEALD+A EGRT IVIAHRLSTIQNAD+I V QNG++ E G+H +L+A KG Y+S+
Sbjct:   32 PTVSVFSMFRYSNWLDKLYMVVGTLAAIIHGAGLPLMMLVFGEMTDIFANAGNLEDLMSNITNRSDINDTGFFMNLEEDMTRYAYYYSGIGAGVLVAAYIQVSFWCLAAGRQIHKIRKQFFHAIMRQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQSMATFFTGFIVGFTRGWKLTLVILAISPVLGLSAAVWAKILSSFTDKELLAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEEAKRIGIKKAITANISIGAAFLLIYASYALAFWYGTTLVLSGEYSIGQVLTVFFSVLIGAFSVGQASPSIEAFANARGAAYEIFKIIDNKPSIDSYSKSGHKPDNIKGNLEFRNVHFSYPSRKEVKILKGLNLKVQSGQTVALVGNSGCGKSTTVQLMQRLYDPTEGMVSVDGQDIRTINVRFLREIIGVVSQEPVLFATTIAENIRYGRENVTMDEIEKAVKEANAYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQVALDKARKGRTTIVIAHRLSTVRNADVIAGFDDGVIVEKGNHDELMKEKGIYFKLVTMQTAGNEVE-------------------LENAADESKSEIDALEMSSNDSRSSLIRKRSTRRSVRGSQAQDRKLSTKEALDESIPPVSFWRIMKLNLTEWPYFVVGVFCAIINGGLQPAFAIIFSKIIGVFTRIDDPETKRQNSNLFSLLFLALGIISFITFFLQGFTFGKAGEILTKRLRYMVFRSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGAIGSRLAVITQNIANLGTGIIISFIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTQEQKFEHMYAQSLQVPYRNSLRKAHIFGITFSFTQAMMYFSYAGCFRFGAYLVAHKLMSFEDVLLVFSAVVFGAMAVGQVSSFAPDYAKAKISAAHIIMIIEKTPLIDSYSTEGLMPNTLEGNVTFGEVVFNYPTRPDIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPLAGKVLLDGKEIKRLNVQWLRAHLGIVSQEPILFDCSIAENIAYG-DNSRVVSQEEIVRAAKEANIHAFIESLPNKYSTKVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQNGRVKEHGTHQQLLAQKGIYFSM 1270          

HSP 2 Score: 443.736 bits (1140), Expect = 4.163e-134
Identity = 247/589 (41.94%), Postives = 359/589 (60.95%), Query Frame = 0
Query:   71 PVVSVRQLFRYASTNDWIFMFLASISACINGMLQPISFILFGELIDDFVEQDAGKTIDLNKEMEKFGIYYVYIGLGAIVFGYFQNMLWLRASINQAFKIRTLAFESILRQDIGFFD--TNDAGELTSRLADGVTKIQSGIGDKIGSLQHAIAMLIGGTIIGFIYGWKLTLVIIAMSPLLFIGAFATGKVIGTITSQEQTSYAKAGSIAEEVLSSIRTVVAFGSEKKETDRYCVHLKDAERAGIRK----GLSTGFAFALFNLTTFGCMALGFWYGGTLISESEMTAGNLLIVFFSILMGASQFGQVSPNMEVFSSARGAAYPIYQLIERQPEIDSLSESGEMIK-IEGDIRFQDCHFAYPSRPNVQVLRGFNLRIKPGTTCALVGESGCGKSTTVKLIQRFYDVARGDVQIDSVGIKSINVKHLRRHIGVVSQEPVLFDASIKKNILMGHPE--ASEEMVIQAAKNANAHGFITELPQGYDTNVGEGGAQLSGGQKQRIAIARALVRDPKILLLDEATSALDTGSEAIVQGALDKASFGRTTIIIAHRLSTVKNADQIAVVSNGQVCELGSHKELIDKRGEYFKMVTLQ 650
            P VS  ++ +   T +W +  +    A ING LQP   I+F ++I  F   D  +T   N  +  F + ++ +G+ + +  + Q   + +A      ++R + F S+LRQD+ +FD   N  G LT+RLA+   +++  IG ++  +   IA L  G II FIYGW+LTL+++A+ P++ I      K++     +++     +G IA E + + RTVV+   E+K    Y   L+   R  +RK    G++  F  A+   +  GC    F +G  L++   M+  ++L+VF +++ GA   GQVS     ++ A+ +A  I  +IE+ P IDS S  G M   +EG++ F +  F YP+RP++ VL+G +L +K G T ALVG SGCGKST V+L++RFYD   G V +D   IK +NV+ LR H+G+VSQEP+LFD SI +NI  G      S+E +++AAK AN H FI  LP  Y T VG+ G QLSGGQKQRIAIARALVR P ILLLDEATSALDT SE +VQ ALDKA  GRT I+IAHRLST++NAD I V  NG+V E G+H++L+ ++G YF MV++Q
Sbjct:  693 PPVSFWRIMKLNLT-EWPYFVVGVFCAIINGGLQPAFAIIFSKIIGVFTRIDDPETKRQNSNL--FSLLFLALGIISFITFFLQGFTFGKAGEILTKRLRYMVFRSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGAIGSRLAVITQNIANLGTGIIISFIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTQEQKFEHMYAQSLQVPYRNSLRKAHIFGITFSFTQAMMYFSYAGC----FRFGAYLVAHKLMSFEDVLLVFSAVVFGAMAVGQVSSFAPDYAKAKISAAHIIMIIEKTPLIDSYSTEGLMPNTLEGNVTFGEVVFNYPTRPDIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPLAGKVLLDGKEIKRLNVQWLRAHLGIVSQEPILFDCSIAENIAYGDNSRVVSQEEIVRAAKEANIHAFIESLPNKYSTKVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQNGRVKEHGTHQQLLAQKGIYFSMVSVQ 1274          
The following BLAST results are available for this feature:
BLAST of TCONS_00067589-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MDR14.163e-13448.05Multidrug resistance protein 1 OS=Homo sapiens GN=... [more]
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