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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049426 ID=TCONS_00049426|Name=TCONS_00049426|organism=Clytia hemisphaerica|type=transcript|length=6395bp
AAATCCATGCTGTGTGCACGTGCTTTTTCTGGTACTGCCCATAAGATGTA
TATGGCATGAAAATCCAAAGTTTTACATACCTCTTGTACAGTTTTTAAGA
GTGACTATTAATTTAACATCCTCCAAGGATAAGGGTCAACATAAATatac
cttttgctaatcaggatgTCATTTTGAACaagtaaaaactccagcattcA
GGCATTAACTGTACTTACTTTACTTTTGACGAAGCATCACATCTCAAAAT
GCTGAGACTTCACCCATATTTGATTAACTTGTCTTTTCCATTCTACTCTG
TCATTTGCGATCATGTTTAAGGTGTTTAAGGTCTATTCCAGTGTCCTCTT
TAATCTCGTCGTCCTTCCATCTGTCGTCCATCGCTTTGGTGGCCTCCCTG
CCTCTCGCCTCAGCCTTGCTTCCTCTTCTTTGTGAAATCATTTTGGAGAG
CTCTTTCGCTCTTTCAACAAGGCTGTTGTCATCAATTTGACCATACCACG
AAAGTCTGCTgacgctgtggtatagtggtcattgatcttggttgctgcac
aggcaaCTGAGATTCGATTCCCACTTGCATTGCAGCAgctcacttggcaa
gtgaatgaacttTCACCTGGGTCAACCcttaggtggccgcatctttttTG
ATTAGcttagcttttttattttgttgattccGCCTCTTGTATCATTTTCA
GATGTGTTAAAaaggtaaataaatacttacttacttacacccatgccatg
tgaggggaattgggtagttagttcaaggtgctgacagggCGCTAATTaaa
aagcatctatagttgcgaaaatgggcctcaaagcctcctgcaactcaacc
aaatagaaatagaagtctttgttttttcacaaagttttgTATGTGTATGG
TTTTGTCCAGGACTCTAACCCCAAGCAAATTTTGGAGACAGTTGTTTTCA
AATACTAAGTCTGTTGGAGTCTTTCTTAGTGAGTGTCCATGTAGAACAAA
CGTATGTAGCTATGGGGTAAATAAGGGCATGAAGAAGTTTCGTTTTAAGT
TCCATAGCTAAGTTTCTGTTTGACGTTCTTGTATAAATTCCCGAAGGCTG
TGTTGTGTGTACATGCTAATGCAAGTCGTTTCTCGATACCTTTGGAAGTT
CCCGGAATAACTATGATCCCAGGAAAGTAAATTACTCAACTTTTTCGACC
AGCTTGCCATCAATCCagatttgtttttcattttctggggAGAGGATTTT
ACATTTGTCACCATTAATTTTGAGTCCATATTTTGCACATGCTGATTCCA
GTTGGTTGGTAGCAAGTTTAAGAGGAAGAAAAGTTACGGTTATTAGGGTT
GTATTGTCTGCATATCTAACATTGTAGCATAATTCGTCATCAAACATAAT
ATTTCTTGAAGATTAAACCACTCAGTAAGCCAATTGTTAATAATAACTGA
ACAAGTCTTATTGTCGTACATGGTTTTGACGGTGTTGACAATATTGTTTG
AGACACCAATTATACGCCGACGACTTAGAACTTGCATTCAAAAGTATTTC
AGACTTAGAAAAAGGACTGAAAATCCTTAATGAAACATTTGTTCGTGTTC
ACCTCCAAATATACGCcaagaaaaccaaaaaatgaTAATAAATCTCAAGT
CTCAAAACCAAGATGAGTATCCTCAATCTATCGTCACGCTTAATGATAAA
GTTATTGAAAATGTTGAAGTGTTCAGATATCTTGAAGACGACATACACTT
CAATCAACCTTCAACAGGAGATGCAGAGATTGACTTAAGAATAGCTGTTG
CTCAAAACAAGTACAACCAAATGAGTAAAAAACTGCACAATCGAAAGATC
TTCCTGAAAACAAGGGTATATCTCCTAAATACAATGGTGCGCAGTCAGCT
GACATATTCCTGTCAAACGCGGAATAtcactcaacaacaacaacaacgaa
tTCTATCCACCTACAACGAATTCGATCCACCTACATTAATATGCTTTGTA
GGATGGTGAGAGGCGGCTTTGAAAGAAGAATTGATGAAAACACTGAGCAA
ACTTTCCACTTCGTCATGTCAAGTGAAGATGTTTTATGCGTCTGTAAGAC
TGAAGACATCCTTCAATACGTCAAACGACAGCAACAAAACTATCTTGGCC
ATATTGCAAGACAAAAGAACACCAGCATCGTCAAAAGACTGCTTTTCAAC
GACAACGCTAACAAGAAGACCAATCAAAACACTCGAAGATCACGTGCTTG
ATGGTCGGTCGCAGCAGACGAATTCTACAAGGAGgtcttaaagaaaaaga
aaaagaaggataTGGTTGGCCTTCGCCCTAACCACTCAATGTTGGCACCT
GAGAACACGAGCTAAAGAAGAAGTAAGTAAGTAATGGCAAACAACATCTT
CCAGTGTCGAACGCActtttaaaatcaatgaaattgaaGTGTAGATTGAC
ACCACACTCTTTTGCCTTCTATGTAATTTGCCTGACGATAAAAATTGCGT
CTACTGTACCAAATTGGGTCTTACTGGTGGAAGTTTCGGTTCTTTCTCTT
ATTTTTTCAAGGAGGATACGGTTTAACACTTCCTGGTATTGACAGTAATA
AAATTGTAAGGTAGTTTTCAGGGTTACTTGTATCGCCTTTCTTGTAGATT
GGTGTCACCGTCGTTTTGGAGCATTCTGAAGGGACCTCGTTAGTAGATAG
GACTTTATTGAAAAGCTTGTGGAGGACATTGAATGTTTGTCATTGTTCAT
CGCCTTCTTCTGATGCACCATTGTGTCCGGGggcctttttaaatttcata
tgCTTGATTGCTTTTACAACATCTTTCTTCTCTATCTAATTGCTCATTAT
TCAGAGCTGGGATGTCTTATTATTTAAAATGTCCGCCTCTCTTGGGAAGG
CTTTGTTCAAGTGttttttgtaatgttttttcCAAATGGTTAGAATTTCA
GAATTGTTGACTAGTTTTGTTACCTGTTACATCTTTCAGGGCCATCACAg
gttttttttggttttgcttcaagctctttgatattttttaaataattcat
GAGTATCTTGTTTTCTCGAAAGTTATTTTCAATGAGTATTGTCTTCTTTT
CTAGTGCTTTTATTTTCGCTTGTTTCACCGCTTTTTTTACTGCGATATTA
AGAATATTGTAATCTGATCGTATTTTGTCATTTGTAGAGTTCGGAAGCAT
TCTTGTTCGAGCACGTCGTCTCTCCTCACAAAGATTTATTGTTTCTTCAT
CTAGACCATTGATGGGCTTTCTCAATCGTTTTCCAACTGTTTCTTCAGTA
TATATGTTCATTCATAATTTTCGTAAACTTGTTGTATTAGGTCTTCCAAG
GACATTTCATTAGAGTTATCTATTAGTGCGCTGAAAGCTcctcttatttt
tatttcaaaactcttTCTGATATTGTTGTCTTTAAATCTGTTGACGGCGA
ATCTTTTAGAAACTTTGGCaaatgttttcgttttttatgGGAAAGTTTAT
ATTGCATCAATAGTAAGAAGTCGTCCCTATCAATATTAAACGAGTTAAAG
ACTTTTTTTGACAAAACATTTTTGATTATCTGGAGTGATTAAGGAAATCC
AGCTGACTTTGGGTTTGTCCATGTTATTAATCTGTGTAGTGGTTGTTTAT
ATTATAAAAGTCTTAATAAGGGAAAATTCGTTTATTGTACAAAACTGTAG
AAGACAGGTACCGTTGTCACTCAGATTACCAACGCAGAAACGACCAACAA
TGTTGGGCCATACATTATACGATTCAGGGCCAACCTTAGCATTAAATCTT
CAAGTATGATTAATTTGCTGTTACGTGGCAAATTGTTGATATGACCTTGG
AGTAATTCGTAAAACGCATCTGACGGGTGCATACGTTTGATCTGGTTTGA
TAAATAAATAAGGGGTCCGTATTTATTTCGATTTGAACCATCATTAGTCT
CTGCAATATCAACTTATAGCCTTCGAGATTTTCGGCCAAAGATCGGTGCA
AAATTGTTGCTACTTCTTGTCGATGGATCCCTTCTTTTCGTTCCAATTGG
ATGTTAATAAAATTGCCTATTTCGAAAGATTCTGGCATCTGTTGCGCCCA
GTGGGTTTCCGAAATGCCGAGAATATCGATATTTAAACGAGTCATTTCTT
TtagtaaaagttttctttttgcgaaaatcaattttttctgtGTGTGGCTT
ATGTATATCAGGAAAAGAAAAGAGATACTTTATGACCATTTTTTATAGTT
TTTCATTGCATAAATGCTTTGGAAATCTCTTgtgtacatttttatttcag
tATTGAAAAGCCAAACAAAACTTGTTATTaaaataaagttgtaaaatgaT
CAATCGTATTAGTGGATTTATTGACAAACATTTGCAGCTCATCAGGGGAA
TGACAGTAGCGACGGGATGCATAGGAATCATACTGATAACTCGAAGGTAC
CATTTGATGAAAAGATACAGACATGTTTCTGAAATACCCAAAGAATTCAT
CACCAAGAAGGTATTTTTACGCGGAAAGTTGGAGAGAATTGAAGTCTGTG
GAACATTATTGATTCAGCACTCCCCTATTCTCTCATTTGGCTTTTCCAAA
GGAAGTCCTTCATTGCGTTTTTCGTTAGCTGGTGTTGAACTGCAAAATGG
GTGGTACGAACATTTACAGGAGCTCCAACACAAAAATATCCTTTTCcaaa
ttttgcagaaaaatgATAAAGAGCTGAAAGgagttttattttataaaaga
GGTTGGCTATCGAAAGAAATGAATGTGAATGAAGATTTGGTTGGAAGAGG
GCTCGCAATAACACGATGTAACATTCCTTCACCACTAAATGTGTTCTTAT
ACCAAGAGTTGATGGAGAGGTTACTCAAAGTCGAACTTCAAGCCGATAAG
AAGGGAATCGGGATCTGGAGACGAGAAAGGGAGGAGACTTTCATTAAAAG
ATTGATTGGTTGGGTGAAAAGAAAGTTGCAAAAATGAGGAGCTCTATAAA
TATCAAACCAAGATTTGTTGGGTCCATCATTGCGAAAGATTTAAAAGTGA
AAGAAGGACGTATTTCATTCCTGTCTGCATCCAGATGCAATTACTGCAAA
CCAACACCCACTCTCAACAACATCATCAACAACACTTTCCTCAACAACAA
ATGATGGACAACAATCTCGTCATCAACAGCGAACACCAAATGCTTATCGG
TAAcgagtttttccaaaaatattctccCATGGCAACCTACACAAACAATA
ACATTCAACTACAACCCAGAATGCATCATTTACCGCTTCAACATCAACCC
ATACATCCGCGACCGCGAAGGCGCCGCTCCAACCACAGCTTAGTTGCCAC
CATGGATCCTGAAGCGGTCGCTCGTCGAAATGAACGCGAACGGAACCGCG
TAAAACAAGTGAACGATGGATTTGATGCTTTGCGTAAGAAAGTTCCCTTT
TTGCCCAATAAAAAGAAACTCTCAAAAGTGGACATTCTCCGATGTGCCAT
GATGTATATTCGTGATTTGAAAGGCGTGGTCGAAGAGTACGACCATAATA
ACACGCACTATCTTACACATGCTCTCGGTATTAAAACCAGACCAAACGGG
AGTTTTAGTAGTTCAAGTAGCTCATCTAGTGACGATTTGATTCTTTTGGA
ACAGGACTTGGAAGATGATTTACTGGGGCACTGATCCCAtattcatttga
aaattagttttttctatttttgtcgGCTTTAAGCCCAATCTATTTTCACG
TGCTGAACGATGTTTAGTttgtattaaaaagaaattgtaaaTATGGAGCt
gtatatatattttatttatagaattcaaaataaacaaagaataCGCAATG
AATANCCATGGATCCTGAAGCGGTCGCGCGTCGAAATGAACGCGAACGGA
ACCGCGTAAAACAAGTGAACGATGGATTTGATGCTTTGCGTAAGAAAGTT
CCCTTTTTGCCCAATAAAAAGAAACTCTCAAAAGTGGACATTCTCCGATG
TGCCATGATGTATATTCGTGATTTGAAAGGCGTGGTCGAAGAGTACGACC
ATAATAACACGCACTATCTTACACATGCTCTCGGTATTAAAACCAGACCA
AACGGGAGTTTTAGTAGTTCAAGTAGCTCATCTAGTGACGATTTGATTCT
TTTGGAACAGGACTTGGAAGATGATTTACTGGGGCACTGATCCCAtattc
atttgaaaattagttttttctatttttgtcgGCTTTAAGCCCAATCTATT
TTCACGTGCTGAACGATGTTTAGTttgtattaaaaagaaattgtaaaTAT
GGAGCtgtatatatattttatttatagaattcaaaataaacaaagaataC
GCAATGAATATTCTTTCGTCCTCACTTCAAAAGGGCACATCTTAT Run BLAST on NCBI protein sequence of TCONS_00049426-protein >TCONS_00049426-protein ID=TCONS_00049426-protein|Name=TCONS_00049426-protein|organism=Clytia hemisphaerica|type=polypeptide|length=213bp
MINRISGFIDKHLQLIRGMTVATGCIGIILITRRYHLMKRYRHVSEIPKE
FITKKVFLRGKLERIEVCGTLLIQHSPILSFGFSKGSPSLRFSLAGVELQ
NGWYEHLQELQHKNILFQILQKNDKELKGVLFYKRGWLSKEMNVNEDLVG
RGLAITRCNIPSPLNVFLYQELMERLLKVELQADKKGIGIWRREREETFI
KRLIGWVKRKLQK Run BLAST on NCBI transcript from alignment at scaffold_159:66892..76530+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049426 ID=TCONS_00049426|Name=TCONS_00049426|organism=Clytia hemisphaerica|type=transcript|length=9639bp|location=Sequence derived from alignment at scaffold_159:66892..76530+ (Clytia hemisphaerica)
AAATCCATGCTGTGTGCACGTGCTTTTTCTGGTACTGCCCATAAGATGTA
TATGGCATGAAAATCCAAAGTTTTACATACCTCTTGTACAGTTTTTAAGA
GTGACTATTAATTTAACATCCTCCAAGGATAAGGGTCAACATAAATatac
cttttgctaatcaggatgTCATTTTGAACaagtaaaaactccagcattcA
GGCATTAACTGTACTTACTTTACTTTTGACGAAGCATCACATCTCAAAAT
GCTGAGACTTCACCCATATTTGATTAACTTGTCTTTTCCATTCTACTCTG
TCATTTGCGATCATGTTTAAGGTGTTTAAGGTCTATTCCAGTGTCCTCTT
TAATCTCGTCGTCCTTCCATCTGTCGTCCATCGCTTTGGTGGCCTCCCTG
CCTCTCGCCTCAGCCTTGCTTCCTCTTCTTTGTGAAATCATTTTGGAGAG
CTCTTTCGCTCTTTCAACAAGGCTGTTGTCATCAATTTGACCATACCACG
AAAGTCTGCTgacgctgtggtatagtggtcattgatcttggttgctgcac
aggcaaCTGAGATTCGATTCCCACTTGCATTGCAGCAgctcacttggcaa
gtgaatgaacttTCACCTGGGTCAACCcttaggtggccgcatctttttTG
ATTAGcttagcttttttattttgttgattccGCCTCTTGTATCATTTTCA
GATGTGTTAAAaaggtaaataaatacttacttacttacacccatgccatg
tgaggggaattgggtagttagttcaaggtgctgacagggCGCTAATTaaa
aagcatctatagttgcgaaaatgggcctcaaagcctcctgcaactcaacc
aaatagaaatagaagtctttgttttttcacaaagttttgTATGTGTATGG
TTTTGTCCAGGACTCTAACCCCAAGCAAATTTTGGAGACAGTTGTTTTCA
AATACTAAGTCTGTTGGAGTCTTTCTTAGTGAGTGTCCATGTAGAACAAA
CGTATGTAGCTATGGGGTAAATAAGGGCATGAAGAAGTTTCGTTTTAAGT
TCCATAGCTAAGTTTCTGTTTGACGTTCTTGTATAAATTCCCGAAGGCTG
TGTTGTGTGTACATGCTAATGCAAGTCGTTTCTCGATACCTTTGGAAGTT
CCCGGAATAACTATGATCCCAGGAAAGTAAATTACTCAACTTTTTCGACC
AGCTTGCCATCAATCCagatttgtttttcattttctggggAGAGGATTTT
ACATTTGTCACCATTAATTTTGAGTCCATATTTTGCACATGCTGATTCCA
GTTGGTTGGTAGCAAGTTTAAGAGGAAGAAAAGTTACGGTTATTAGGGTT
GTATTGTCTGCATATCTAACATTGTAGCATAATTCGTCATCAAACATAAT
ATTTCTTGAAGATTAAACCACTCAGTAAGCCAATTGTTAATAATAACTGA
ACAAGTCTTATTGTCGTACATGGTTTTGACGGTGTTGACAATATTGTTTG
AGACACCAATTATACGCCGACGACTTAGAACTTGCATTCAAAAGTATTTC
AGACTTAGAAAAAGGACTGAAAATCCTTAATGAAACATTTGTTCGTGTTC
ACCTCCAAATATACGCcaagaaaaccaaaaaatgaTAATAAATCTCAAGT
CTCAAAACCAAGATGAGTATCCTCAATCTATCGTCACGCTTAATGATAAA
GTTATTGAAAATGTTGAAGTGTTCAGATATCTTGAAGACGACATACACTT
CAATCAACCTTCAACAGGAGATGCAGAGATTGACTTAAGAATAGCTGTTG
CTCAAAACAAGTACAACCAAATGAGTAAAAAACTGCACAATCGAAAGATC
TTCCTGAAAACAAGGGTATATCTCCTAAATACAATGGTGCGCAGTCAGCT
GACATATTCCTGTCAAACGCGGAATAtcactcaacaacaacaacaacgaa
tTCTATCCACCTACAACGAATTCGATCCACCTACATTAATATGCTTTGTA
GGATGGTGAGAGGCGGCTTTGAAAGAAGAATTGATGAAAACACTGAGCAA
ACTTTCCACTTCGTCATGTCAAGTGAAGATGTTTTATGCGTCTGTAAGAC
TGAAGACATCCTTCAATACGTCAAACGACAGCAACAAAACTATCTTGGCC
ATATTGCAAGACAAAAGAACACCAGCATCGTCAAAAGACTGCTTTTCAAC
GACAACGCTAACAAGAAGACCAATCAAAACACTCGAAGATCACGTGCTTG
ATGGTCGGTCGCAGCAGACGAATTCTACAAGGAGgtcttaaagaaaaaga
aaaagaaggataTGGTTGGCCTTCGCCCTAACCACTCAATGTTGGCACCT
GAGAACACGAGCTAAAGAAGAAGTAAGTAAGTAATGGCAAACAACATCTT
CCAGTGTCGAACGCActtttaaaatcaatgaaattgaaGTGTAGATTGAC
ACCACACTCTTTTGCCTTCTATGTAATTTGCCTGACGATAAAAATTGCGT
CTACTGTACCAAATTGGGTCTTACTGGTGGAAGTTTCGGTTCTTTCTCTT
ATTTTTTCAAGGAGGATACGGTTTAACACTTCCTGGTATTGACAGTAATA
AAATTGTAAGGTAGTTTTCAGGGTTACTTGTATCGCCTTTCTTGTAGATT
GGTGTCACCGTCGTTTTGGAGCATTCTGAAGGGACCTCGTTAGTAGATAG
GACTTTATTGAAAAGCTTGTGGAGGACATTGAATGTTTGTCATTGTTCAT
CGCCTTCTTCTGATGCACCATTGTGTCCGGGggcctttttaaatttcata
tgCTTGATTGCTTTTACAACATCTTTCTTCTCTATCTAATTGCTCATTAT
TCAGAGCTGGGATGTCTTATTATTTAAAATGTCCGCCTCTCTTGGGAAGG
CTTTGTTCAAGTGttttttgtaatgttttttcCAAATGGTTAGAATTTCA
GAATTGTTGACTAGTTTTGTTACCTGTTACATCTTTCAGGGCCATCACAg
gttttttttggttttgcttcaagctctttgatattttttaaataattcat
GAGTATCTTGTTTTCTCGAAAGTTATTTTCAATGAGTATTGTCTTCTTTT
CTAGTGCTTTTATTTTCGCTTGTTTCACCGCTTTTTTTACTGCGATATTA
AGAATATTGTAATCTGATCGTATTTTGTCATTTGTAGAGTTCGGAAGCAT
TCTTGTTCGAGCACGTCGTCTCTCCTCACAAAGATTTATTGTTTCTTCAT
CTAGACCATTGATGGGCTTTCTCAATCGTTTTCCAACTGTTTCTTCAGTA
TATATGTTCATTCATAATTTTCGTAAACTTGTTGTATTAGGTCTTCCAAG
GACATTTCATTAGAGTTATCTATTAGTGCGCTGAAAGCTcctcttatttt
tatttcaaaactcttTCTGATATTGTTGTCTTTAAATCTGTTGACGGCGA
ATCTTTTAGAAACTTTGGCaaatgttttcgttttttatgGGAAAGTTTAT
ATTGCATCAATAGTAAGAAGTCGTCCCTATCAATATTAAACGAGTTAAAG
ACTTTTTTTGACAAAACATTTTTGATTATCTGGAGTGATTAAGGAAATCC
AGCTGACTTTGGGTTTGTCCATGTTATTAATCTGTGTAGTGGTTGTTTAT
ATTATAAAAGTCTTAATAAGGGAAAATTCGTTTATTGTACAAAACTGTAG
AAGACAGGTACCGTTGTCACTCAGATTACCAACGCAGAAACGACCAACAA
TGTTGGGCCATACATTATACGATTCAGGGCCAACCTTAGCATTAAATCTT
CAAGTATGATTAATTTGCTGTTACGTGGCAAATTGTTGATATGACCTTGG
AGTAATTCGTAAAACGCATCTGACGGGTGCATACGTTTGATCTGGTTTGA
TAAATAAATAAGGGGTCCGTATTTATTTCGATTTGAACCATCATTAGTCT
CTGCAATATCAACTTATAGCCTTCGAGATTTTCGGCCAAAGATCGGTGCA
AAATTGTTGCTACTTCTTGTCGATGGATCCCTTCTTTTCGTTCCAATTGG
ATGTTAATAAAATTGCCTATTTCGAAAGATTCTGGCATCTGTTGCGCCCA
GTGGGTTTCCGAAATGCCGAGAATATCGATATTTAAACGAGTCATTTCTT
TtagtaaaagttttctttttgcgaaaatcaattttttctgtGTGTGGCTT
ATGTATATCAGGAAAAGAAAAGAGATACTTTATGACCATTTTTTATAGTT
TTTCATTGCATAAATGCTTTGGAAATCTCTTgtgtacatttttatttcag
tATTGAAAAGCCAAACAAAACTTGTTATTaaaataaagttgtaaaatgaT
CAATCGTATTAGTGGATTTATTGACAAACATTTGCAGCTCATCAGGGtac
aaatattttcaattttcacgttTACCTAATTCCTGATGGACCTAGATGGA
CTTCAATGGTAATTCTATGACTGATATAGGTTAAAATCATACCGAAGTGG
GCAATGAATTTAAATAATCTCAATCTAAGTTCTGTTTGAATTACATACTG
TTtagatatttcatatttttcgaTTTCTGTTGTTTCTGTACAAGATTGTT
TTCAGTCTCGTATTGTATAATCATTTGTACTTTGTAACAGAGAATGTTCT
GTATAATGTCTCTATCATATATTCTTTGTAGGGAATGACAGTAGCGACGG
GATGCATAGGAATCATACTGATAACTCGAAGGTACCATTTGGTATGtacc
aaaattttgattgttttaccATTTCATACCTAAAAAGCAGAATGCTTTTC
CTATTAATATCATGATCACGTTATTTCCATTGCACTTTTATTTCACCATT
ATTTGTTTATTCACTTGATTCAGATGAAAAGATACAGACATGTTTCTGAA
ATACCCAAAGAATTCATCACCAAGAAGGTATTTTTACGCGGAAAGTTGGA
GAGAATTGAAGTCTGTGGAACATTATTGATTCAGCACTCCCCTATTCTCT
CATTTGGCTTTTCCAAAGGTTTGACAATTTCATTCTTCATAGTGCGGACA
GGGGCctgatccccccttcttaaatgatcccgtcccttcttggcatcccc
caacctttaaaaataccTNAAGGGGCctgacccccccccttcttaaatga
tcccgtcccttcttggcatccccccaaggacaaaaatagctaacaaatat
atgtgaaatCTCTTTAGATAGTAAAAGCGAAATAATAcacttcttctttt
tgactcagactactctaacagaaaacttcctttcattgagaccaaatttc
ataacagtgcttgaaaataatctacaatatatatgtaagcccccttCTTA
AACTGTCCCCTtccctttttcatgaaaattccTGACCCCCCCCTTCTTTA
TTTTTTCGGAAGGTGTCATCTCCCCCctccccttaagaaagggggggggg
atgaAACAAACTATGATTCTTTCGAATtttcatagcgtcagcctgagttt
aggtcccaggcaaaaataaGGGCCCCCTGAAatttaagtccccccaaaga
tttatgaattttttgttagcccccaggacttttgaccctagacacttcca
aaaaattgatccagtaaaaaagggttttccaatgtaaatGGAGTTCAGTT
GTAAgttttttaagataaaatattttgcacactttttcaaaaatttttca
gattcatgagcttcaatttgggtatttgaagccaactattaagctgaatt
attttagcccccgcgttaagtgatgagattttagctccccccaattACAC
AGGtcccccaaaaaagtggtgtacttccagccccctccttttttggggaa
aaatgtagggtgtaacccccccccAACTAGCAAGGGGGGATGACGCTATG
ATTTTGCTATGATATTTTGTAGTATTTTACATTAGGAGAAGTATTCCGAA
CGAAATTGAAGTTGGATTAAcagtttttctctttatttgGATTGTTTAGG
AAGTCCTTCATTGCGTTTTTCGTTAGCTGGTGTTGAACTGCAAAATGGGT
GGTACGAACATTTACAGGAGCTCCAACACAAAAATATCCTTTTCcaaatt
ttgcagaaaaatgATAAAGAGCTGAAAGgagttttattttataaaagagT
AAGTGAATAAATAAAGGTTGTTTAGGGAGACCCTGCCATGTCaaataaat
atttaatttctgcGACTTTTGCTAGAAATTCTTTTTAtttcgattaaaaa
aaacccAGGGACTAAAATAGCTAAAACCCTTTATCGTTTAGCTcattttt
ttaagattcaaTCATTTATTCacaatttttgacttttaaatccAGTTGGA
ATTGTTTAGTCTGGAAAACTGCCTTAGGTTTCTTCTTATTCAATGAAATT
ATTCGATAGCAGACCCTTTGACCCTTTTTCTCACATTTCGCCAATTGGTG
TCCTAAAATATCCTATATTatatttcgaaaattgaaaataaacggATCTA
CATGAAGGAAATGCCATGAAGGCTACGTGAGGACATTTGAGTGAAGACTA
AAAAAAGCCCCTAAGTATCACAGATGTATTTTATTGTTATGtttaatacc
ttaagggaaataATTATGGTTAACTTTTCGAAATTAAAGTTCTCGCAAAA
ATTAACTTTATTTGTAATATTGGAAATTTAAAGTTATTCGctcaaattct
ttttcaacaatTCCTGCCcctcgctaaaattagttcttCCCGAGCAAAAT
GACTAAACTTCaaactgaaactttttttgacttCAGGGTTGGCTATCGAA
AGAAATGAATGTGAATGAAGATTTGGTTGGAAGAGGGCTCGCAATAACAC
GATGTAACATTCCTTCACCACTAAATGTGTTCTTATACCAAGAGTTGATG
GAGAGGTTACTCAAAGTCGAACTTCAAGCCGATAAGAAGGGAATCGGGAT
CTGGAGACGAGAAAGGGAGGAGACTTTCATTAAAAGATTGATTGGTTGGG
TGAAAAGAAAGTTGCAAAAATGAGGAGGTAAATGTTCAATTCTTTTGATA
ATTGTCTTGACGGtgcttcttcttttgtttttctaatcATGCTCAATGTG
ATAACAAGAAGTATATTGTTCGACTTGAAGTTGTTTGCTATTTTATATGT
GGGAAGTTGAGTTAGGCTACTGCTATCCCCGAAATTCTTTCAAACATCAT
TTTACGTATATATGTTAGACTTAGTGCTTTAAACccctttcatttttcaa
agaaatttcctTAGTGTTTTTACACTTTCACAGCTCAACAAAAAAGGATA
ACTATTTCTAGACATCATTCAGCATGCTTCAATGAATAGCGAGCTTCTGT
GAATTGAATGAAGCTTTTCATTCTCTTTCAATAGACGCATCTATTTTTGA
CTTTGCTTTGCTCATGCGCactgaaaaataattcaaaggaTCAGCTAGAA
GTATCTCGTGAGCAACATTATTTGCTTTTTTGCATGCGTGAAAATTTTGC
AATTGACTTGTGAGGAGGTTTTCCGAAAGCGTTTAAAAGGACTTTGATGG
TGGtgaaagaagaactttaaatccttctcaaagaAAACAAACTTCTTAAA
GTTTGAAGAGGTCCTTTTAATTATTTCAATATTTCCATTGAGCTGTTGTT
TTTAGATCTTCTTTTTGTACTAGTTTCACTTTTATTGAGCTCTTTATTGA
ATAGGTTGATAAGGCTTTTTATGGGAAAATCTTTGCCCTCTTGCTGATCT
TTAAAAATCTGTAAGGTTATTGCAATGTTTAATGAAAGAAAAGGATTCTT
TTTCACTTtgctttgttttgttgtttcttcgCGGCGAAAGGATAAAACgg
attttcctttttctttcacttttgttgAGATGATgggaaaatatcatttt
cattgCAATTTAATTTTATCACCTTCTTGCTCaacttttattaatttcaa
ataaagaatttgtttaaaaataatcttttcaaaataaacGGCTCGTGTCA
AAAAGACGGGggttaacttttatcaaattaaatCGAATCCATTCCGACCG
CTGACAAACTACCTCTCAAACAAAAGCTATATCAAAAGAATATTTGAGTt
ggaaattaaattttcatcaatttgaGTCTCGGAAAATTCGTTGGGATCGT
GGCAAAATGTCCCCCCTGTATTAGTGTAAAGTTAGTTCCCTGTGAAGTAA
TGAAATTAGTATCGAACCTTCTTCTTCCTCCCTAGCTCTATAAATATCAA
ACCAAGATTTGTTGGGTCCATCATTGCGAAAGATTTAAAAGTGAAAGAAG
GACGTATTTCATTCCTGTCTGCATCCAGATGCAATTACTGCAAACCAACA
CCCACTCTCAACAACATCATCAACAACACTTTCCTCAACAACAAATGATG
GACAACAATCTCGTCATCAACAGCGAACACCAAATGCTTATCGGTAAcga
gtttttccaaaaatattctccCATGGCAACCTACACAAACAATAACATTC
AACTACAACCCAGAATGCATCATTTACCGCTTCAACATCAACCCATACAT
CCGCGACCGCGAAGGCGCCGCTCCAACCACAGCTTAGTTGCCACCATGGA
TCCTGAAGCGGTCGCTCGTCGAAATGAACGCGAACGGAACCGCGTAAAAC
AAGTGAACGATGGATTTGATGCTTTGCGTAAGAAAGTTCCCTTTTTGCCC
AATAAAAAGAAACTCTCAAAAGTGGACATTCTCCGATGTGCCATGATGTA
TATTCGTGATTTGAAAGGCGTGGTCGAAGAGTACGACCATAATAACACGC
ACTATCTTACACATGCTCTCGGTATTAAAACCAGACCAAACGGGAGTTTT
AGTAGTTCAAGTAGCTCATCTAGTGACGATTTGATTCTTTTGGAACAGGA
CTTGGAAGATGATTTACTGGGGCACTGATCCCAtattcatttgaaaatta
gttttttctatttttgtcgGCTTTAAGCCCAATCTATTTTCACGTGCTGA
ACGATGTTTAGTttgtattaaaaagaaattgtaaaTATGGAGCtgtatat
atattttatttatagaattcaaaataaacaaagaataCGCAATGAATANC
CATGGATCCTGAAGCGGTCGCGCGTCGAAATGAACGCGAACGGAACCGCG
TAAAACAAGTGAACGATGGATTTGATGCTTTGCGTAAGAAAGTTCCCTTT
TTGCCCAATAAAAAGAAACTCTCAAAAGTGGACATTCTCCGATGTGCCAT
GATGTATATTCGTGATTTGAAAGGCGTGGTCGAAGAGTACGACCATAATA
ACACGCACTATCTTACACATGCTCTCGGTATTAAAACCAGACCAAACGGG
AGTTTTAGTAGTTCAAGTAGCTCATCTAGTGACGATTTGATTCTTTTGGA
ACAGGACTTGGAAGATGATTTACTGGGGCACTGATCCCAtattcatttga
aaattagttttttctatttttgtcgGCTTTAAGCCCAATCTATTTTCACG
TGCTGAACGATGTTTAGTttgtattaaaaagaaattgtaaaTATGGAGCt
gtatatatattttatttatagaattcaaaataaacaaagaataCGCAATG
AATATTCTTTCGTCCTCACTTCAAAAGGGCACATCTTAT Coding sequence (CDS) from alignment at scaffold_159:66892..76530+ >TCONS_00049426 ID=TCONS_00049426|Name=TCONS_00049426|organism=Clytia hemisphaerica|type=CDS|length=3210bp|location=Sequence derived from alignment at scaffold_159:66892..76530+ (Clytia hemisphaerica)
atgaTCAATCGTATTAGTGGATTTATTGACAAACATTTGCAGCTCATCAG
GGGAATGACAGTAGCGACGGGATGCATAGGAATCATACTGATAACTCGAA
GGTACCATTTGATGAAAAGATACAGACATGTTTCTGAAATACCCAAAGAA
TTCATCACCAAGAAGGTATTTTTACGCGGAAAGTTGGAGAGAATTGAAGT
CTGTGGAACATTATTGATTCAGCACTCCCCTATTCTCTCATTTGGCTTTT
CCAAAGGAAGTCCTTCATTGCGTTTTTCGTTAGCTGGTGTTGAACTGCAA
AATGGGTGGTACGAACATTTACAGGAGCTCCAACACAAAAATATCCTTTT
CcaaattttgcagaaaaatgATAAAGAGCTGAAAGgagttttattttata
aaagaGGTTGGCTATCGAAAGAAATGAATGTGAATGAAGATTTGGTTGGA
AGAGGGCTCGCAATAACACGATGTAACATTCCTTCACCACTAAATGTGTT
CTTATACCAAGAGTTGATGGAGAGGTTACTCAAAGTCGAACTTCAAGCCG
ATAAGAAGGGAATCGGGATCTGGAGACGAGAAAGGGAGGAGACTTTCATT
AAAAGATTGATTGGTTGGGTGAAAAGAAAGTTGCAAAAATGAatgaTCAA
TCGTATTAGTGGATTTATTGACAAACATTTGCAGCTCATCAGGGGAATGA
CAGTAGCGACGGGATGCATAGGAATCATACTGATAACTCGAAGGTACCAT
TTGATGAAAAGATACAGACATGTTTCTGAAATACCCAAAGAATTCATCAC
CAAGAAGGTATTTTTACGCGGAAAGTTGGAGAGAATTGAAGTCTGTGGAA
CATTATTGATTCAGCACTCCCCTATTCTCTCATTTGGCTTTTCCAAAGGA
AGTCCTTCATTGCGTTTTTCGTTAGCTGGTGTTGAACTGCAAAATGGGTG
GTACGAACATTTACAGGAGCTCCAACACAAAAATATCCTTTTCcaaattt
tgcagaaaaatgATAAAGAGCTGAAAGgagttttattttataaaagaGGT
TGGCTATCGAAAGAAATGAATGTGAATGAAGATTTGGTTGGAAGAGGGCT
CGCAATAACACGATGTAACATTCCTTCACCACTAAATGTGTTCTTATACC
AAGAGTTGATGGAGAGGTTACTCAAAGTCGAACTTCAAGCCGATAAGAAG
GGAATCGGGATCTGGAGACGAGAAAGGGAGGAGACTTTCATTAAAAGATT
GATTGGTTGGGTGAAAAGAAAGTTGCAAAAATGAatgaTCAATCGTATTA
GTGGATTTATTGACAAACATTTGCAGCTCATCAGGGGAATGACAGTAGCG
ACGGGATGCATAGGAATCATACTGATAACTCGAAGGTACCATTTGATGAA
AAGATACAGACATGTTTCTGAAATACCCAAAGAATTCATCACCAAGAAGG
TATTTTTACGCGGAAAGTTGGAGAGAATTGAAGTCTGTGGAACATTATTG
ATTCAGCACTCCCCTATTCTCTCATTTGGCTTTTCCAAAGGAAGTCCTTC
ATTGCGTTTTTCGTTAGCTGGTGTTGAACTGCAAAATGGGTGGTACGAAC
ATTTACAGGAGCTCCAACACAAAAATATCCTTTTCcaaattttgcagaaa
aatgATAAAGAGCTGAAAGgagttttattttataaaagaGGTTGGCTATC
GAAAGAAATGAATGTGAATGAAGATTTGGTTGGAAGAGGGCTCGCAATAA
CACGATGTAACATTCCTTCACCACTAAATGTGTTCTTATACCAAGAGTTG
ATGGAGAGGTTACTCAAAGTCGAACTTCAAGCCGATAAGAAGGGAATCGG
GATCTGGAGACGAGAAAGGGAGGAGACTTTCATTAAAAGATTGATTGGTT
GGGTGAAAAGAAAGTTGCAAAAATGAatgaTCAATCGTATTAGTGGATTT
ATTGACAAACATTTGCAGCTCATCAGGGGAATGACAGTAGCGACGGGATG
CATAGGAATCATACTGATAACTCGAAGGTACCATTTGATGAAAAGATACA
GACATGTTTCTGAAATACCCAAAGAATTCATCACCAAGAAGGTATTTTTA
CGCGGAAAGTTGGAGAGAATTGAAGTCTGTGGAACATTATTGATTCAGCA
CTCCCCTATTCTCTCATTTGGCTTTTCCAAAGGAAGTCCTTCATTGCGTT
TTTCGTTAGCTGGTGTTGAACTGCAAAATGGGTGGTACGAACATTTACAG
GAGCTCCAACACAAAAATATCCTTTTCcaaattttgcagaaaaatgATAA
AGAGCTGAAAGgagttttattttataaaagaGGTTGGCTATCGAAAGAAA
TGAATGTGAATGAAGATTTGGTTGGAAGAGGGCTCGCAATAACACGATGT
AACATTCCTTCACCACTAAATGTGTTCTTATACCAAGAGTTGATGGAGAG
GTTACTCAAAGTCGAACTTCAAGCCGATAAGAAGGGAATCGGGATCTGGA
GACGAGAAAGGGAGGAGACTTTCATTAAAAGATTGATTGGTTGGGTGAAA
AGAAAGTTGCAAAAATGAatgaTCAATCGTATTAGTGGATTTATTGACAA
ACATTTGCAGCTCATCAGGGGAATGACAGTAGCGACGGGATGCATAGGAA
TCATACTGATAACTCGAAGGTACCATTTGATGAAAAGATACAGACATGTT
TCTGAAATACCCAAAGAATTCATCACCAAGAAGGTATTTTTACGCGGAAA
GTTGGAGAGAATTGAAGTCTGTGGAACATTATTGATTCAGCACTCCCCTA
TTCTCTCATTTGGCTTTTCCAAAGGAAGTCCTTCATTGCGTTTTTCGTTA
GCTGGTGTTGAACTGCAAAATGGGTGGTACGAACATTTACAGGAGCTCCA
ACACAAAAATATCCTTTTCcaaattttgcagaaaaatgATAAAGAGCTGA
AAGgagttttattttataaaagaGGTTGGCTATCGAAAGAAATGAATGTG
AATGAAGATTTGGTTGGAAGAGGGCTCGCAATAACACGATGTAACATTCC
TTCACCACTAAATGTGTTCTTATACCAAGAGTTGATGGAGAGGTTACTCA
AAGTCGAACTTCAAGCCGATAAGAAGGGAATCGGGATCTGGAGACGAGAA
AGGGAGGAGACTTTCATTAAAAGATTGATTGGTTGGGTGAAAAGAAAGTT
GCAAAAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049426-exon-scaffold_159-1491911889:66892..71287 | TCONS_00049426-exon-scaffold_159-1491911889:66892..71287 | Clytia hemisphaerica | exon |
| TCONS_00049426-exon-scaffold_159-1510915933:66892..71287 | TCONS_00049426-exon-scaffold_159-1510915933:66892..71287 | Clytia hemisphaerica | exon |
| TCONS_00049426-exon-scaffold_159-1575043694:66892..71287 | TCONS_00049426-exon-scaffold_159-1575043694:66892..71287 | Clytia hemisphaerica | exon |
| TCONS_00049426-exon-scaffold_159-1491911889:71573..71632 | TCONS_00049426-exon-scaffold_159-1491911889:71573..71632 | Clytia hemisphaerica | exon |
| TCONS_00049426-exon-scaffold_159-1510915933:71573..71632 | TCONS_00049426-exon-scaffold_159-1510915933:71573..71632 | Clytia hemisphaerica | exon |
| TCONS_00049426-exon-scaffold_159-1575043694:71573..71632 | TCONS_00049426-exon-scaffold_159-1575043694:71573..71632 | Clytia hemisphaerica | exon |
| TCONS_00049426-exon-scaffold_159-1491911889:71765..71909 | TCONS_00049426-exon-scaffold_159-1491911889:71765..71909 | Clytia hemisphaerica | exon |
| TCONS_00049426-exon-scaffold_159-1510915933:71765..71909 | TCONS_00049426-exon-scaffold_159-1510915933:71765..71909 | Clytia hemisphaerica | exon |
| TCONS_00049426-exon-scaffold_159-1575043694:71765..71909 | TCONS_00049426-exon-scaffold_159-1575043694:71765..71909 | Clytia hemisphaerica | exon |
| TCONS_00049426-exon-scaffold_159-1491911889:72891..73039 | TCONS_00049426-exon-scaffold_159-1491911889:72891..73039 | Clytia hemisphaerica | exon |
| TCONS_00049426-exon-scaffold_159-1510915933:72891..73039 | TCONS_00049426-exon-scaffold_159-1510915933:72891..73039 | Clytia hemisphaerica | exon |
| TCONS_00049426-exon-scaffold_159-1575043694:72891..73039 | TCONS_00049426-exon-scaffold_159-1575043694:72891..73039 | Clytia hemisphaerica | exon |
| TCONS_00049426-exon-scaffold_159-1491911889:73678..73918 | TCONS_00049426-exon-scaffold_159-1491911889:73678..73918 | Clytia hemisphaerica | exon |
| TCONS_00049426-exon-scaffold_159-1510915933:73678..73918 | TCONS_00049426-exon-scaffold_159-1510915933:73678..73918 | Clytia hemisphaerica | exon |
| TCONS_00049426-exon-scaffold_159-1575043694:73678..73918 | TCONS_00049426-exon-scaffold_159-1575043694:73678..73918 | Clytia hemisphaerica | exon |
| TCONS_00049426-exon-scaffold_159-1491911889:75127..76530 | TCONS_00049426-exon-scaffold_159-1491911889:75127..76530 | Clytia hemisphaerica | exon |
| TCONS_00049426-exon-scaffold_159-1510915933:75127..76530 | TCONS_00049426-exon-scaffold_159-1510915933:75127..76530 | Clytia hemisphaerica | exon |
| TCONS_00049426-exon-scaffold_159-1575043694:75127..76530 | TCONS_00049426-exon-scaffold_159-1575043694:75127..76530 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_159 | supercontig | scaffold_159:66892..76530 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR016071 | Staphylococal_nuclease_OB-fold |
Blast
BLAST of TCONS_00049426 vs. Swiss-Prot (Human)
Match: CC033 (Protein C3orf33 OS=Homo sapiens GN=C3orf33 PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.043e-19 Identity = 76/211 (36.02%), Postives = 114/211 (54.03%), Query Frame = 2
Query: 4346 MINRISGFIDKHLQLIRGMTVATGCIGIILITRRYHLMKRYRHVSEIPKEFITKKVFLRGKLERIEVCGTLLIQHSPIL--SFGFSKGSP--SLRFSLAGVELQNGWYEHLQ-ELQHKNIL-FQILQKNDKELKG-VLFYKRGWLSKEMNVNEDLVGRGLAITRCNIPSPLNVFLYQELMERLLKVELQADKKGIGIWRRERE-ETFIKRL 4954
++ RIS + D HL+L+R ++ GI+L+ R L ++ S+IP EFI + V LRG+L RI G L I+H PI + P +L LAGVEL LQ EL+ +L FQ+L K + L +L K G+ S +N+NE+++ RGL T + +Y + LLK EL A KKG GIW+ + E E+++++
Sbjct: 22 VVARISQWADDHLRLVRNISTGMAIAGIMLLLRSIRLTSKFTSSSDIPVEFIRRNVKLRGRLRRITENG-LEIEHIPITLPIIASLRKEPRGALLVKLAGVELAETGKAWLQKELKPSQLLWFQLLGKENSALFCYLLVSKGGYFS--VNLNEEILRRGLGKTVLVKGLKYDSKIYWTVHRNLLKAELTALKKGEGIWKEDSEKESYLEKF 229
The following BLAST results are available for this feature:
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