|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054318 ID=TCONS_00054318|Name=TCONS_00054318|organism=Clytia hemisphaerica|type=transcript|length=1540bp
ctttgaaaaaatgaaaaaaataatcagaATATAAAGTTTGGGTTATTAAG
ATCGCGTCAAATAAAATAATCCCACTCTCAAATACTgaatatttcattaa
aaaatagatttttatgacttttggGTTTATTTATTGGGGTTGATTTGTTA
TTCAAAGAGGAAAGAGACGTCTCAAAATGGCTTATTTTTAAAAGAGAGTC
CAAATCCGTTCATATGATTTAGTTCTCCCTAACAACAACAGTTCTGTGAC
AGCAATNAAAAGAGAGTCCAAATCCGTTCATATGATTTAGTTCTCCCTAA
CAACAGCAGTTCTGTGACAGCAACAAACTAACCTGCAGCCATGCCTATTA
TGCGAGCATCGGCTGCTGTGCAGTCTGGTGGTCCACCGCCAACTAGACGG
AATAACTCTAATGTGGAAAATCGCAAAAGTACCTTTACTCCTGAAAATCG
GAAGTCGAGGTCCAGTCTGAGCAACACTAACTTAACAAGCAGTCAGAACA
GCAATATCAACAACGGCAACAACAAACAGAACATCGCTTCTTATGGCAGT
CAAACGCAGTTCAAAGCTTCATTCACCATATCACGTGATAAAGATGACAC
TCCAGCTTGCTTCAAACAGGACGGAGAACGCTTCACAAATGAACAGACCC
TGAAATTATATTCAGCTGCAGACTACACTGTTAAAATGGAAATTGCACCG
AATATGGAATTATTGTATATCAAATTTGGTGGCGTTGAAACTCCCTTCAA
ATCAACCAATGATCCTGAAAAAGATCAAAAGTCCATCTACCAATTTTTAT
GGTCCACTAAAGGGATTGACCCTACAGAAAATCGACATCGAACAGACGTT
TTATGTTCTATGAAgttcaaaaacttcaaagaaataGAGTTCAGGCTACA
AGTCAAATTTTATACTTTACAGAAAATGAAACATGCAACTTGGGGCGAAA
AATTGAACAGTATTTCTATGGATTGTACTGCTGGGCGTGGCACTTATcaa
tcttttgttgaaaaaatgaaatatatttaatGCTAATGGGTCCAAGTCGT
TCCTTCATTGGATGCCTgagaaaatttattattttctgCGGTTGGGTTAG
AGATGTGGCACAGCCAATCCAGATATTGAAATTCTGTGGATTACCTTATT
CCAATATTTGTTCTGCGCAGTTATTTGGTTCAGTTCTAAGCTTGTGATTT
ACGAAGGCTCTGCTGTTTGAATATTCTCACAGAGTAAGATCAAGATACAA
ATACAGATTGACGTCATGAGTTACTATGGAAACCGTTGTAAACCACTCCT
TTCTCTGGTAGAAAATAGAGTTTGTGTTGTAAACTCATTGTAACCATGTC
AACCAGCAAAAGAGCCTTGAAGCTGGTTTTATCCaaggataaacttttta
aaaatctatgaTAATATGAACTATAAgtatcttttataaaatgttaattt
ttagtTCCAGTTATTTATTTACGATTATATTATCTGacgaaagaaaatat
ttttaccccTTATCTACCTACCCGATTTTCTTCTAATGCC Run BLAST on NCBI protein sequence of TCONS_00054318-protein >TCONS_00054318-protein ID=TCONS_00054318-protein|Name=TCONS_00054318-protein|organism=Clytia hemisphaerica|type=polypeptide|length=229bp
MPIMRASAAVQSGGPPPTRRNNSNVENRKSTFTPENRKSRSSLSNTNLTS
SQNSNINNGNNKQNIASYGSQTQFKASFTISRDKDDTPACFKQDGERFTN
EQTLKLYSAADYTVKMEIAPNMELLYIKFGGVETPFKSTNDPEKDQKSIY
QFLWSTKGIDPTENRHRTDVLCSMKFKNFKEIEFRLQVKFYTLQKMKHAT
WGEKLNSISMDCTAGRGTYQSFVEKMKYI Run BLAST on NCBI transcript from alignment at scaffold_242:168714..175012- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054318 ID=TCONS_00054318|Name=TCONS_00054318|organism=Clytia hemisphaerica|type=transcript|length=6299bp|location=Sequence derived from alignment at scaffold_242:168714..175012- (Clytia hemisphaerica)
CTTTGAAAAAATGAAAAAAATAATCAGAATATAAAGTTTGGGTTATTAAG
ATCGCGTCAAATAAAATAATCCCACTCTCAAATACTGAATATTTCATTAA
AAAATAGATTTTTATGACTTTTGGGTTTATTTATTGGGGTTGATTTGTTA
TTCAAAGAGGAAAGAGACGTCTCAAAATGGCTTATTTTTAAAAGAGAGTC
CAAATCCGTTCATATGATTTAGTTCTCCCTAACAACAACAGTTCTGTGAC
AGCAATNAAAAGAGAGTCCAAATCCGTTCATATGATTTAGTTCTCCCTAA
CAACAGCAGTTCTGTGACAGCAACAAACTAACCTGCAGCCATGCCTATTA
TGCGAGCATCGGCTGCTGTGCAGTCTGGTGGTCCACCGCCAACTAGACGG
AATAACTCTAATGTGGAAAATCGCAAAAGTACCTTTACTCCTGAAAGTAA
GTATTCATGGTGCAATCCAACAAAATTTAAATTAAAGACTGGATTAGACT
GCATGGTCAGCCCTTGCCCCTACCTATAACAAAGGGAAATGGTGGATTTG
TTTTAGATTACAAATAGTTTTATGAGAGCTGAGTGGAAACGTAAATAAGT
TTGCGACTTTACTTTAACACATCCAAATGGCTAGCCCAGTCTAGAGTTCG
TTGTATACATCCCCTTTGAAAATGATAGAAGATGCAGGATGGGATATGGG
AAACGACGTCTGTAACGCTCGTTTATCAAATTTTTGATAATGTGAACATC
GCTAGCTTGGTACTATAGTTACCTCTCGCTAATACGAACTGGAATGGGAA
TTCCAATCCTTTTGAACAACAGAGGGTAGTACAGGAATACACCTTTTCGA
CTGTGGTCAGGTGCATACCACTTTATTATTTAATTTATCACCATAAACTC
GATCCAATCCTTTTTTTTATACTTTTTTCTATTGTCTTTAGGTGCGAAAA
AAAGACTGGGACGGTTTTAGGGTCGTAAAGCGGACGAAAAAATGCCCGTG
CGGTAATTGGCGGCTACGGTCGAAAAGGTGTATTACAGAGACTTTTTTAC
GAGTGTTACCCTTTGACGGGAATTGGAAATGAGTTCCATTTATAGAAAAA
TTCGAATAATAGAAGTTCGAATTAGCGAGAGTTCACTGTAAGCATAGCTA
ATCTCCAAGCAGATTCTGATACTCCACGCATGCCACGTAGACACTCTAAA
GCTTTTTTCCCATGTACGTAAAATTTTACTTAAGACCTTGAAGGTGGGGA
ATTTCCCTAAGCTTATGTAGTGTTTTAAGGCCTTATGTAAAGTTTGCTTA
CGTTCAAAAAGTTTTAAACGGAAGGAAAAGTCACGTAAGACCCAGCTTTT
TTCACATGTACGTAAAATCTTACTTTAGACCGTACGAAAAATCGTTCGTA
AGGCTGTCCTTTGGGAATTTCCCCGATATTATGTAGAGTTTTTGTTGATT
AAGAGGTTCTTACGTGACTTTTCCTTCCGTTCAAAACTTTTTGAACGTAA
GCAAACTCTACAAAAGGCCTTAAAACACTACATAAGCTTAGGGAAATTCC
CCATTCTTCAAAGTCTTAAGTAAAATTTTACGTACATGTGAAAAAAGCTT
AAAGGCCATAGCTCCGTAACAAAATCTGCCCAGGTTTGTGGGTCTCTTTG
ATCTTTTTCCGTTTGATTCGTGATGAATAAATGAGCTTCTCAGCGCCATG
GCTGGCTAAATGAAAACAAATTTTATACATAAATATTAGAACCCGGTTGC
TTTTGCTTTTGTTTTAAAGCAAATAGCAAAGTCACTATGATTTTTTTGGT
TTAGATATTCGCCAAGCCCCCACGGTGCGCAAAATGGATGATCTGTTATG
AGATTAAGTCATATAGTTGGTTTCATTTTTACAAATAGAAAATTAAATTC
TCAGCTTAAGTTGAGCTAGGATCTGACACTGTCTGTCTGTCTGTCTGTCT
GTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGT
CTGTCTGTCTGTCTGTCTTTTATAATGTGTATGTCGGACGGAAATGGTTA
TTTAGGTGTGTGGCATTGGGTTGATGGATGTCTACTAAGTGGCAGTTTTT
ACACTAGGCTTTGATAGTGGTAGTATTCGAGCACTTGTTTTGAACTATTT
CCATCAATGATCTTTACCATATTGATTTTGTCGTATATTTTTTCTTTGGA
TTGGTTTCACTAGTTTTGGGTTCAAAATTTTTCTTTTGCAAAGGTGGGTT
TTGGCCTTCATCAACAGTTCTGAATTGCTTTCTTCATGTCCTTCCGTCCG
GCTGTCTGTCTGACTGTCTATCTGTCACAAAAACTTTAGGACAGCCTGGA
GACTTCTAAAATAGTTGCATTTGGCTAAAATTTGGCACACTTTTTCCCAG
GTTGAATTTTCAGGGACGTTTTTTCATTTTTCAAATTTTGATTTTGGGTT
TTCACAAAAAGGAAGCTAAATCTTTGGGGCAATCATTGAAAAAGTGATTT
TGAAAATTTTCACCAAATATGGAATTATTTGATTATACTTTTGCTTTGTA
CATGAGTTTGTCACGTACTCTTGGTAAATCACTGCCACTCCTTTATTCTT
CAAATGAGTAACTCAAAACAAAGACAGAGTACCTATTTTGTCATCATCCC
CTCCTTTTCAATTAATCATCACTAAGTGTCAATAATGATTAATAATTAAT
TACATTCTCTCCCCCCTAATCAACCCATATGGGGCTCTTTTTTCCTTCAA
AAATATGGATATATGACGTCATGGACAAAAGGTTTAATCTTTCGAAATCT
TTCTTAAAATTAATTAATGTCAAAAAGGCTAGTTCATCCTCTTCAAAAAA
AAGGAAATAGCCTTTTTTTTTGAATAATTTCATTGTAAAGCTTATGTTCT
TTTGAGGGGACTAAAACAATAATTTTGATGGGATTGACTGATATTGATTG
ATTGATATTGATTTATGTTTTCACCAAGAAGTGAGCAAATGACTTGATGA
CTACCAAGCTAATGTAACGCTTTTTACTCAATGATGAGTTTTTCTTGACA
ATGTGACATTTGTACACAAAGTAAACATCCAGGAGTGTCTGGTATCAAAG
GCTTTAAAAAGGGCAAAGAAGAAAAAAAGCAGTTAATTCGACATACTTAA
AGATAAAAAGAAGAAAAGGACATACGAGGAAAGAATTTTTTTTATCAAAA
TCGATCAGAATACAGTCGTAGTTATAAAAAAATAAAAATAAAGGAACGTA
GAATTATATAAGAGAAAAAGAATACTAAGAAAAGAATACGAAGAAAAAAC
TTCAAATCATCAAGCAACATATGTGGATGGTTTCCTTTTTAAAACTGATC
GAATTCTTATCCTCGTTTTTATCTGTCCTAAAAAATTCAATTTTTTTGGT
GGTGTTCTGACTGAAAACTGTCTATGACGTCATTTTTGTTTTGACCATTC
ATCAATCAAAGAAAATCATCTCTAGACACAGAAAGTTTATTTGTGTTTGG
TCAGTGGAGTCAAGAGGAGAAAATTTAACTGTTTTTGTGAATTTTGTATA
AAACGTCATCCTTGTTTTGATGTCGGTCGAGGAGGATTAATCCAAATTGA
GTGGCTATACAAACATTGTTGAACATACTCGTGAAAAGAATTAACTTAAG
TCAATATTACTGAGAGACCTCCAAAGAGTGACTTTGTAAAAAAGGAATAT
CGTAATAATTTTTGACAATCTATAGTTGGACGCTGATGGTTTCGGTGGTC
AGTGGTTTCTATAGTGTGTTGAAACAATAAACAACTTTTTGTTTTGATGT
GCTTTTTGTAGATGTGTTGTTGTTCTTGATTTTATTTGCCGTGCAATAAA
TGGCAACGAAAACTGGTAAAACGACTTTTTGCTACTGTATTCGTAATGCA
GGGCTTTAAGAACAATAATTTTAGCGATTCATTGAAATAGTTGCATTTTT
ACCAGTTTTCCTTTTTTTCAAAGGTTTGTTTTTTTCGAGCTTCAAATTTT
CACCGGTAAAATATTTAGGATCTAAAGAGATCTTGTGTGAAACACATTTG
GTGTAACAAAACCTTGTTACTACCTACGGTCATAACGTTTATATAACATT
AAAGTAATGTCGAAACACTCTGTGTCGAATGTGTACTGACCAGATAATTT
AAGAATTTCTGTTCTTTTTTACCAGATCGGAAGTCGAGGTCCAGTCTGAG
CAACACTAACTTAACAAGCAGTCAGAACAGCAATATCAACAACGGCAACA
ACAAACAGAACATCGCTTCTTATGGCAGTCAAACGCAGTTCAAAGCTTCA
TTCACCATATCACGTGATAAAGATGACACTCCAGCTTGCTTCAAACAGGA
CGGAGAACGCTTCACAAATGAACAGACCCTGAAATTATATTCAGCTGCAG
ACTACACTGTTAAAATGGAAATTGCACCGAATATGGAATTATTGTAAGTC
CTGTTACTTCGGCTTATATCTAGTGCTGTTCAGATTATTCAGACATACCA
TCATCAATCAGGTTGACAGAAGTAAGATTTAGACGGGGCTTCATTATCAA
TGTATGAGATTTGTTTTTCTCACATAATCTAGATTTGAGTGGTTAATTCT
TCCCACAGGCTCGAGTTTTCGTCAGTTATCGATTGCGTCAAGCGCTTAAA
CCTGATCAAAGGATAAATGCCATGTTCAGATGAATGAGCTGTTATGAAAT
TCAACAAGAACATTAAAAATCTATTATTTTTACTCTCAATAACACCATTG
AGGGCTTAGAATTTGTGATTTTTTGTCAGTATTAAGGAGCCACCATACAA
ACAGTCCTTAACTTTTTGTTTCGTCTCAGTATCTTGTTTCAAAAGAGATA
TCCTACGTTATGAAAACATTAAATTATGTTTTGGCCTAGACGAGGACTGG
ATATAGCGCACTTGTTTATCAACTTTATGTTAATCATGTTTATATTACAA
AAACTAGAGAGTTTTAAAATCTCCCAAGCTCAATTGAGACGAGATGGAGT
TTTTACAAGCTCTTATTTGATTTGGTTGGTCGTTAACCAGTAATAAAACA
ATTTTGTTACTTTTCCTAAAGAACGCGTCATTTTTATTATTTTAAATGAC
CAATTATTAAAGTATCTTATAAAAACTCCATCTCATCTGGCTCAAATAGG
AAATCCCCACTCATCCTTTTGACCTACAACTTCAAGAAATATAAAATAAA
AACTTTCGCTCTTAGGTATTGCTATTTTCCGGTAGATTTGATACCTTAAC
CTTTGATTTAAGGTCGGCGTATACTTGAGTTAAATGAGTAAACTTCCTCT
TTCACATATTCTTTAGAATACTTCATCCACTTCCAAAAAGGTCATTTCCA
TTTTGAGAATACATCAGAGCATTTTCCCATGGCCATGACTTTAGGATCTA
AAATAATTTCTCGATTTCCCACTTAAATTTTCTTGAGCACTCAATGATTT
TTATTTATCACATATTTTTTCAGGTATATCAAATTTGGTGGCGTTGAAAC
TCCCTTCAAATCAACCAATGATCCTGAAAAAGATCAAAAGTCCATCTACC
AATTTTTATGGTCCACTAAAGGGATTGACCCTACAGAAAATCGACATCGA
ACAGACGTTTTATGTTCTATGAAGTTCAAAAACTTCAAAGAAATAGAGTT
CAGGCTACAAGTCAAATTTTATACTTTACAGAAAATGAAACATGCAACTT
GGGGCGAAAAATTGAACAGTATTTCTATGGATTGTACTGCTGGGCGTGGC
ACTTATCAATCTTTTGTTGAAAAAATGAAATATATTTAATGCTAATGGGT
CCAAGTCGTTCCTTCATTGGATGCCTGAGAAAATTTATTATTTTCTGCGG
TTGGGTTAGAGATGTGGCACAGCCAATCCAGATATTGAAATTCTGTGGAT
TACCTTATTCCAATATTTGTTCTGCGCAGTTATTTGGTTCAGTTCTAAGC
TTGTGATTTACGAAGGCTCTGCTGTTTGAATATTCTCACAGAGTAAGATC
AAGATACAAATACAGATTGACGTCATGAGTTACTATGGAAACCGTTGTAA
ACCACTCCTTTCTCTGGTAGAAAATAGAGTTTGTGTTGTAAACTCATTGT
AACCATGTCAACCAGCAAAAGAGCCTTGAAGCTGGTTTTATCCAAGGATA
AACTTTTTAAAAATCTATGATAATATGAACTATAAGTATCTTTTATAAAA
TGTTAATTTTTAGTTCCAGTTATTTATTTACGATTATATTATCTGACGAA
AGAAAATATTTTTACCCCTTATCTACCTACCCGATTTTCTTCTAATGCC Coding sequence (CDS) from alignment at scaffold_242:168714..175012- >TCONS_00054318 ID=TCONS_00054318|Name=TCONS_00054318|organism=Clytia hemisphaerica|type=CDS|length=2070bp|location=Sequence derived from alignment at scaffold_242:168714..175012- (Clytia hemisphaerica)
GTATATCAAATTTGGTGGCGTTGAAACTCCCTTCAAATCAACCAATGATC
CTGAAAAAGATCAAAAGTCCATCTACCAATTTTTATGGTCCACTAAAGGG
ATTGACCCTACAGAAAATCGACATCGAACAGACGTTTTATGTTCTATGAA
GTTCAAAAACTTCAAAGAAATAGAGTTCAGGCTACAAGTCAAATTTTATA
CTTTACAGAAAATGAAACATGCAACTTGGGGCGAAAAATTGAACAGTATT
TCTATGGATTGTACTGCTGGGCGTGGCACTTATCAATCTTTTGTTGAAAA
AATGAAATATATTTAAATCGGAAGTCGAGGTCCAGTCTGAGCAACACTAA
CTTAACAAGCAGTCAGAACAGCAATATCAACAACGGCAACAACAAACAGA
ACATCGCTTCTTATGGCAGTCAAACGCAGTTCAAAGCTTCATTCACCATA
TCACGTGATAAAGATGACACTCCAGCTTGCTTCAAACAGGACGGAGAACG
CTTCACAAATGAACAGACCCTGAAATTATATTCAGCTGCAGACTACACTG
TTAAAATGGAAATTGCACCGAATATGGAATTATTATGCCTATTATGCGAG
CATCGGCTGCTGTGCAGTCTGGTGGTCCACCGCCAACTAGACGGAATAAC
TCTAATGTGGAAAATCGCAAAAGTACCTTTACTCCTGAAAGTATATCAAA
TTTGGTGGCGTTGAAACTCCCTTCAAATCAACCAATGATCCTGAAAAAGA
TCAAAAGTCCATCTACCAATTTTTATGGTCCACTAAAGGGATTGACCCTA
CAGAAAATCGACATCGAACAGACGTTTTATGTTCTATGAAGTTCAAAAAC
TTCAAAGAAATAGAGTTCAGGCTACAAGTCAAATTTTATACTTTACAGAA
AATGAAACATGCAACTTGGGGCGAAAAATTGAACAGTATTTCTATGGATT
GTACTGCTGGGCGTGGCACTTATCAATCTTTTGTTGAAAAAATGAAATAT
ATTTAAATCGGAAGTCGAGGTCCAGTCTGAGCAACACTAACTTAACAAGC
AGTCAGAACAGCAATATCAACAACGGCAACAACAAACAGAACATCGCTTC
TTATGGCAGTCAAACGCAGTTCAAAGCTTCATTCACCATATCACGTGATA
AAGATGACACTCCAGCTTGCTTCAAACAGGACGGAGAACGCTTCACAAAT
GAACAGACCCTGAAATTATATTCAGCTGCAGACTACACTGTTAAAATGGA
AATTGCACCGAATATGGAATTATTATGCCTATTATGCGAGCATCGGCTGC
TGTGCAGTCTGGTGGTCCACCGCCAACTAGACGGAATAACTCTAATGTGG
AAAATCGCAAAAGTACCTTTACTCCTGAAAGTATATCAAATTTGGTGGCG
TTGAAACTCCCTTCAAATCAACCAATGATCCTGAAAAAGATCAAAAGTCC
ATCTACCAATTTTTATGGTCCACTAAAGGGATTGACCCTACAGAAAATCG
ACATCGAACAGACGTTTTATGTTCTATGAAGTTCAAAAACTTCAAAGAAA
TAGAGTTCAGGCTACAAGTCAAATTTTATACTTTACAGAAAATGAAACAT
GCAACTTGGGGCGAAAAATTGAACAGTATTTCTATGGATTGTACTGCTGG
GCGTGGCACTTATCAATCTTTTGTTGAAAAAATGAAATATATTTAAATCG
GAAGTCGAGGTCCAGTCTGAGCAACACTAACTTAACAAGCAGTCAGAACA
GCAATATCAACAACGGCAACAACAAACAGAACATCGCTTCTTATGGCAGT
CAAACGCAGTTCAAAGCTTCATTCACCATATCACGTGATAAAGATGACAC
TCCAGCTTGCTTCAAACAGGACGGAGAACGCTTCACAAATGAACAGACCC
TGAAATTATATTCAGCTGCAGACTACACTGTTAAAATGGAAATTGCACCG
AATATGGAATTATTATGCCTATTATGCGAGCATCGGCTGCTGTGCAGTCT
GGTGGTCCACCGCCAACTAGACGGAATAACTCTAATGTGGAAAATCGCAA
AAGTACCTTTACTCCTGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054318-exon-scaffold_242-1575043694:174567..175012 | TCONS_00054318-exon-scaffold_242-1575043694:174567..175012 | Clytia hemisphaerica | exon |
| TCONS_00054318-exon-scaffold_242-1575043694:170570..170837 | TCONS_00054318-exon-scaffold_242-1575043694:170570..170837 | Clytia hemisphaerica | exon |
| TCONS_00054318-exon-scaffold_242-1575043694:168714..169539 | TCONS_00054318-exon-scaffold_242-1575043694:168714..169539 | Clytia hemisphaerica | exon |
| TCONS_00054318-exon-scaffold_242-1510915933:174567..175012 | TCONS_00054318-exon-scaffold_242-1510915933:174567..175012 | Clytia hemisphaerica | exon |
| TCONS_00054318-exon-scaffold_242-1510915933:170570..170837 | TCONS_00054318-exon-scaffold_242-1510915933:170570..170837 | Clytia hemisphaerica | exon |
| TCONS_00054318-exon-scaffold_242-1510915933:168714..169539 | TCONS_00054318-exon-scaffold_242-1510915933:168714..169539 | Clytia hemisphaerica | exon |
| TCONS_00054318-exon-scaffold_242-1491911889:174567..175012 | TCONS_00054318-exon-scaffold_242-1491911889:174567..175012 | Clytia hemisphaerica | exon |
| TCONS_00054318-exon-scaffold_242-1491911889:170570..170837 | TCONS_00054318-exon-scaffold_242-1491911889:170570..170837 | Clytia hemisphaerica | exon |
| TCONS_00054318-exon-scaffold_242-1491911889:168714..169539 | TCONS_00054318-exon-scaffold_242-1491911889:168714..169539 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_242 | supercontig | scaffold_242:168714..175012 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR029204 | CNRIP1 |
Blast
BLAST of TCONS_00054318 vs. Swiss-Prot (Human)
Match: CNRP1 (CB1 cannabinoid receptor-interacting protein 1 OS=Homo sapiens GN=CNRIP1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 6.177e-18 Identity = 42/140 (30.00%), Postives = 74/140 (52.86%), Query Frame = 2
Query: 563 KASFTISRDKDDTPACFKQDGERFTNEQTLKLYSAADYTVKMEIAPN-MELLYIKFGGVETPFK-STNDPEKDQKSIYQFLWSTKGIDPTENRHRTDVLCSMKFKNFKEIEFRLQVKFYTLQKMKHATWGEKLNSISMDC 976
+ S + +D P +K DG+RF +T+KL + + Y V+++I P+ +++ I GGV P + + +P+ D + +Y + T+G+ PT++ R + +M F + E QVKFY K H WG + I +C
Sbjct: 9 RLSIALRIQPNDGPVFYKVDGQRFGQNRTIKLLTGSSYKVEVKIKPSTLQVENISIGGVLVPLELKSKEPDGD-RVVYTGTYDTEGVTPTKSGERQPIQITMPFTDIGTFETVWQVKFYNYHKRDHCQWGSPFSVIEYEC 147
The following BLAST results are available for this feature:
|
